Rw5G028190

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
42470486 .. 42474156
3671 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028190.1

Sequence Viewer

Length: 1812 bp
ATGGGCATCCGGGGTCTCCTTCCAGTCGATTCAGGTATGGGCCAAGGCAAAGGTGTCGCCGCCAGTGGAGGAGGAGTTGATGAGAGAGCCTATGAAGGACTCCCAGATGTTGAGGGAAAATGGGTCAAAGACCTATACCTTAAGATATGTGTGCCTCTCTATAAGTATGCACTAAAAGGTGACTGGGAAGCTGCTGAACAAATCTTGGAAAAGGATTGGACACTTTTGAGTGCTAGCATATCAAGGGGATGGGACACTGTCCTTCATATTGCAGCAGGAGCAAGACATATTCATTTTGTGGAGAAACTGGTAGAAATTATGGACAAAGAACACTTGGCACTCCAAGACATAAATGGAAACACTGCACTATGCATTGCTGCCGCGGCAGGATCTGTAGAGATTGTCCAAATTTTGATAAATCATAATGATTCTTTGCTGACAGTTCGAGGAGGTCAAAAAATGGCACCACCATATATGGCTGCTGTGTTAGGACAGTCACAAATGGCATGGTACCTATACCCGAAAAGTAAAAAGATGTTGGAGAAAACCGACCTCGAAAATTTGTTCTTTTCGTGCATCAACAATGGTTTGTATGATTTAGCCTTACAGTTGCTGGATACTGATACAACATTAGCCAAGGCACGTACTGATAGGCCGAAAAATAAAACAGCCTTGCATATCTTGGCTCGAAGACCTTCAGTATTTGGAACCCATAGTCCAGGAATGTGGGGTAGACTCATTAAATCATCCCTCCCAGGTTTTAAGTTTGCATTGAAAAGAAATTTAAATCATGTTGATGAAGCACTTCAGCTAGTCCAACGCCTTTGGGAAGAAATTTTGAAAGATGAGCATGATGATGTGATGAGGTTGATCAAATATCCCTCAAATTTATTATTTGATGCAACAGAATTAGGGAATTATGAGTTCCTAGCAACGCTTATAAACTCATATCCTGAGTTAGTATGGGAAACTGATAAAAAAAATCGAACCATAATCCATGTCGCAGTTCTACATCGTCATGCAAGTATTTTCAATCTAGTGCATGAGATAGGGTCAATCAAGGATGTCATAGTGACTTATGAGGATGATCAGGGTAATAATATAGTGCATATGGCTGCAAAAGCAGCACCTCAAAACCAACTGAATCTAGTGTCGGGTGTAGCTCTTCAAATGCAACGAGAATTAGTATGGTTTGAGGAAGTAAAGAAGATTGTGCAACCTCAATATATAGAGATGGAAAACAAGAAAGGAAAAACACCTCAAGAAATATTCACTAAAGAGCATAAGACGTTAATGCATCAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCTTGCTTGTTGCGACTATTATTGCAACTGTTGTGTTTTCAGCAGCATTTAGTATACCAGGTGGCACAGATGATCATACTGGAAAGCCAAACTTTTTAAAAGAAAAAGCGTTTTTATACTTTACCATAGCCGACGGAGTGGCACTTTTTTCCTCTTCAACTGCAATGCTGATGTTCTTGTTCATCCTTACCTCACGGTATGCAGAAAATGATTTCCTCATGTCCTTGCCCTTGAAGTTGATGGTTGGACTCACTTGTCTCTTCATCTCAATAGCATCTATGATGATGGCTTTTAGCACTGCCTTCTATTTGTCTTGTCAATATGGATCAAGATGGGTTCCAGATCTTACATTTTCTTTTGCAATTGTCCCTGTTGCTTTATATGCATTTCTACAATTCCCTCTTGTGTCTGATATGTCGTCTTCAACATTTTGTTCAAGTCTTTTATTTCAGCCATGGAAACGTATAATATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

603

Amino Acids

67.64

Weight (kDa)

6.51

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 57 - 142 2.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 88 - 175 2.6e-09 Ankyrin repeats (3 copies)
PGG PF13962 436 - 549 5.2e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 941
AasI GACNNNNNNGTC 1 cut(s) 1590
Acc65I GGTACC 1 cut(s) 510
AccB1I GGYRCC 2 cut(s) 463, 510
AccI GTMKAC 2 cut(s) 733, 1390
AccII CGCG 1 cut(s) 383
AciI CCGC 3 cut(s) 60, 381, 383
AclWI GGATC 2 cut(s) 397, 1669
AcsI RAATTY 5 cut(s) 408, 559, 781, 834, 886
AcuI CTGAAG 2 cut(s) 681, 791
AfaI GTAC 2 cut(s) 512, 646
AflII CTTAAG 1 cut(s) 140
AgsI TTSAA 8 cut(s) 775, 841, 1033, 1169, 1494, 1570, 1761, 1773
AjnI CCWGG 3 cut(s) 718, 754, 1393
AloI GAACNNNNNNTCC 2 cut(s) 700, 732
AluBI AGCT 3 cut(s) 191, 811, 1163
AluI AGCT 3 cut(s) 191, 811, 1163
Alw26I GTCTC 2 cut(s) 20, 1598
AlwI GGATC 2 cut(s) 397, 1669
AlwNI CAGNNNCTG 2 cut(s) 392, 613
AoxI GGCC 2 cut(s) 40, 653
ApeKI GCWGC 7 cut(s) 191, 272, 377, 479, 1115, 1124, 1379
ApoI RAATTY 5 cut(s) 408, 559, 781, 834, 886
Asp700I GAANNNNTTC 2 cut(s) 694, 804
Asp718I GGTACC 1 cut(s) 510
AspS9I GGNCC 1 cut(s) 40
AsuC2I CCSGG 1 cut(s) 11
AsuHPI GGTGA 1 cut(s) 191
AsuNHI GCTAGC 1 cut(s) 233
BanI GGYRCC 2 cut(s) 463, 510
BbsI GAAGAC 2 cut(s) 697, 1749
BbvI GCAGC 7 cut(s) 178, 284, 364, 466, 1102, 1136, 1391
BccI CCATC 5 cut(s) 243, 1228, 1570, 1615, 1662
BcgI CGANNNNNNTGC 2 cut(s) 37, 71
BciT130I CCWGG 3 cut(s) 720, 756, 1395
BciVI GTATCC 1 cut(s) 610
BclI TGATCA 3 cut(s) 870, 1087, 1408
BcnI CCSGG 1 cut(s) 11
BcoDI GTCTC 2 cut(s) 20, 1598
BfaI CTAG 5 cut(s) 234, 812, 929, 1037, 1148
BfmI CTRYAG 1 cut(s) 393
BfrI CTTAAG 1 cut(s) 140
BfuI GTATCC 1 cut(s) 610
BglII AGATCT 1 cut(s) 1678
Bme1390I CCNGG 4 cut(s) 11, 720, 756, 1395
BmgT120I GGNCC 1 cut(s) 40
BmiI GGNNCC 4 cut(s) 465, 512, 709, 1674
BmrFI CCNGG 4 cut(s) 11, 720, 756, 1395
BmrI ACTGGG 1 cut(s) 193
BmsI GCATC 5 cut(s) 15, 585, 889, 1306, 1619
BmtI GCTAGC 1 cut(s) 237
BmuI ACTGGG 1 cut(s) 193
BpiI GAAGAC 2 cut(s) 697, 1749
BpuEI CTTGAG 1 cut(s) 1245
BpuMI CCSGG 1 cut(s) 11
BsaAI YACGTR 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 20
BsaJI CCNNGG 6 cut(s) 10, 43, 381, 636, 754, 1790
BsaXI ACNNNNNCTCC 2 cut(s) 60, 90
Bse1I ACTGG 5 cut(s) 23, 63, 188, 312, 1420
Bse3DI GCAATG 2 cut(s) 372, 1506
BseBI CCWGG 3 cut(s) 720, 756, 1395
BseDI CCNNGG 6 cut(s) 10, 43, 381, 636, 754, 1790
BseGI GGATG 7 cut(s) 6, 254, 746, 1069, 1090, 1320, 1518
BseMI GCAATG 2 cut(s) 372, 1506
BseMII CTCAG 1 cut(s) 945
BseNI ACTGG 5 cut(s) 23, 63, 188, 312, 1420
BseRI GAGGAG 3 cut(s) 84, 87, 462
BseXI GCAGC 7 cut(s) 178, 284, 364, 466, 1102, 1136, 1391
BsgI GTGCAG 1 cut(s) 348
Bsh1236I CGCG 1 cut(s) 383
BshFI GGCC 2 cut(s) 42, 655
BshNI GGYRCC 2 cut(s) 463, 510
BsiSI CCGG 1 cut(s) 10
BslFI GGGAC 2 cut(s) 266, 1688
BsmAI GTCTC 2 cut(s) 20, 1598
BsmFI GGGAC 2 cut(s) 266, 1688
BsnI GGCC 2 cut(s) 42, 655
Bso31I GGTCTC 1 cut(s) 20
Bsp143I GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
Bsp19I CCATGG 1 cut(s) 1790
BspACI CCGC 3 cut(s) 60, 381, 383
BspANI GGCC 2 cut(s) 42, 655
BspCNI CTCAG 1 cut(s) 946
BspFNI CGCG 1 cut(s) 383
BspLI GGNNCC 4 cut(s) 465, 512, 709, 1674
BspOI GCTAGC 1 cut(s) 237
BspPI GGATC 2 cut(s) 397, 1669
BspQI GCTCTTC 1 cut(s) 1170
BspT107I GGYRCC 2 cut(s) 463, 510
BspTI CTTAAG 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 20
BsrDI GCAATG 2 cut(s) 372, 1506
BsrI ACTGG 5 cut(s) 23, 63, 188, 312, 1420
BssECI CCNNGG 6 cut(s) 10, 43, 381, 636, 754, 1790
BssMI GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
BssNAI GTATAC 1 cut(s) 1391
BssT1I CCWWGG 3 cut(s) 43, 636, 1790
Bst1107I GTATAC 1 cut(s) 1391
Bst2UI CCWGG 3 cut(s) 720, 756, 1395
Bst4CI ACNGT 6 cut(s) 259, 442, 495, 609, 1366, 1533
Bst6I CTCTTC 3 cut(s) 1170, 1495, 1601
BstAFI CTTAAG 1 cut(s) 140
BstBAI YACGTR 1 cut(s) 644
BstC8I GCNNGC 2 cut(s) 235, 1340
BstDEI CTNAG 1 cut(s) 954
BstDSI CCRYGG 2 cut(s) 381, 1790
BstF5I GGATG 7 cut(s) 6, 254, 746, 1069, 1090, 1320, 1518
BstFNI CGCG 1 cut(s) 383
BstKTI GATC 6 cut(s) 392, 873, 1090, 1411, 1664, 1681
BstMAI GTCTC 2 cut(s) 20, 1598
BstMBI GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
BstMWI GCNNNNNNNGC 5 cut(s) 278, 383, 1121, 1124, 1718
BstNI CCWGG 3 cut(s) 720, 756, 1395
BstSCI CCNGG 4 cut(s) 9, 718, 754, 1393
BstSFI CTRYAG 1 cut(s) 393
BstUI CGCG 1 cut(s) 383
BstV1I GCAGC 7 cut(s) 178, 284, 364, 466, 1102, 1136, 1391
BstV2I GAAGAC 2 cut(s) 697, 1749
BstX2I RGATCY 2 cut(s) 389, 1678
BstXI CCANNNNNNTGG 1 cut(s) 726
BstYI RGATCY 2 cut(s) 389, 1678
BstZ17I GTATAC 1 cut(s) 1391
BsuI GTATCC 1 cut(s) 610
BsuRI GGCC 2 cut(s) 42, 655
BtgI CCRYGG 2 cut(s) 381, 1790
BtsCI GGATG 7 cut(s) 6, 254, 746, 1069, 1090, 1320, 1518
BtsI GCAGTG 3 cut(s) 360, 1323, 1632
BtsIMutI CAGTG 5 cut(s) 70, 255, 360, 1323, 1632
Cac8I GCNNGC 2 cut(s) 235, 1340
CaiI CAGNNNCTG 2 cut(s) 392, 613
Cfr13I GGNCC 1 cut(s) 40
Cfr42I CCGCGG 1 cut(s) 384
CsiI ACCWGGT 1 cut(s) 1393
Csp6I GTAC 2 cut(s) 511, 645
CviAII CATG 9 cut(s) 507, 791, 851, 998, 1019, 1043, 1335, 1555, 1791
CviQI GTAC 2 cut(s) 511, 645
DdeI CTNAG 1 cut(s) 954
DpnI GATC 6 cut(s) 391, 872, 1089, 1410, 1663, 1680
DpnII GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
DraI TTTAAA 2 cut(s) 786, 1434
DrdI GACNNNNNNGTC 1 cut(s) 1590
DseDI GACNNNNNNGTC 1 cut(s) 1590
Eam1104I CTCTTC 3 cut(s) 1170, 1495, 1601
EarI CTCTTC 3 cut(s) 1170, 1495, 1601
Eco130I CCWWGG 3 cut(s) 43, 636, 1790
Eco31I GGTCTC 1 cut(s) 20
Eco57I CTGAAG 2 cut(s) 681, 791
EcoRII CCWGG 3 cut(s) 718, 754, 1393
EcoT14I CCWWGG 3 cut(s) 43, 636, 1790
EcoT22I ATGCAT 3 cut(s) 374, 1299, 1723
ErhI CCWWGG 3 cut(s) 43, 636, 1790
FaeI CATG 9 cut(s) 510, 794, 854, 1001, 1022, 1046, 1338, 1558, 1794
FalI AAGNNNNNCTT 2 cut(s) 1412, 1444
FaqI GGGAC 2 cut(s) 266, 1688
FatI CATG 9 cut(s) 506, 790, 850, 997, 1018, 1042, 1334, 1554, 1790
FauNDI CATATG 1 cut(s) 1110
FbaI TGATCA 3 cut(s) 870, 1087, 1408
FblI GTMKAC 2 cut(s) 733, 1390
FokI GGATG 6 cut(s) 261, 733, 1076, 1097, 1327, 1505
FspBI CTAG 5 cut(s) 234, 812, 929, 1037, 1148
HaeIII GGCC 2 cut(s) 42, 655
HapII CCGG 1 cut(s) 10
Hin1II CATG 9 cut(s) 510, 794, 854, 1001, 1022, 1046, 1338, 1558, 1794
HinfI GANTC 6 cut(s) 29, 99, 428, 735, 1144, 1584
HpaII CCGG 1 cut(s) 10
HphI GGTGA 1 cut(s) 191
Hpy166II GTNNAC 2 cut(s) 734, 1391
Hpy188I TCNGA 1 cut(s) 1747
Hpy188III TCNNGA 4 cut(s) 953, 1262, 1665, 1676
Hpy8I GTNNAC 2 cut(s) 734, 1391
Hpy99I CGWCG 1 cut(s) 1472
HpyAV CCTTC 6 cut(s) 29, 89, 272, 705, 1312, 1648
HpyCH4III ACNGT 6 cut(s) 259, 442, 495, 609, 1366, 1533
HpyCH4IV ACGT 3 cut(s) 643, 1289, 1798
HpyF10VI GCNNNNNNNGC 5 cut(s) 278, 383, 1121, 1124, 1718
HpyF3I CTNAG 1 cut(s) 954
HpySE526I ACGT 3 cut(s) 643, 1289, 1798
Hsp92II CATG 9 cut(s) 510, 794, 854, 1001, 1022, 1046, 1338, 1558, 1794
KpnI GGTACC 1 cut(s) 514
Ksp22I TGATCA 3 cut(s) 870, 1087, 1408
KspI CCGCGG 1 cut(s) 384
Kzo9I GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
LguI GCTCTTC 1 cut(s) 1170
LmnI GCTCC 1 cut(s) 278
Lsp1109I GCAGC 7 cut(s) 178, 284, 364, 466, 1102, 1136, 1391
LweI GCATC 5 cut(s) 15, 585, 889, 1306, 1619
MabI ACCWGGT 1 cut(s) 1393
MaeI CTAG 5 cut(s) 234, 812, 929, 1037, 1148
MaeII ACGT 3 cut(s) 643, 1289, 1798
MaeIII GTNAC 3 cut(s) 179, 495, 1072
MalI GATC 6 cut(s) 391, 872, 1089, 1410, 1663, 1680
MboI GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
MboII GAAGA 7 cut(s) 702, 842, 1157, 1219, 1482, 1588, 1749
MfeI CAATTG 1 cut(s) 1698
MflI RGATCY 2 cut(s) 389, 1678
MlyI GAGTC 3 cut(s) 93, 729, 1578
MmeI TCCRAC 3 cut(s) 519, 841, 1561
Mph1103I ATGCAT 3 cut(s) 374, 1299, 1723
MroXI GAANNNNTTC 2 cut(s) 694, 804
MseI TTAA 6 cut(s) 141, 741, 762, 785, 1292, 1433
MslI CAYNNNNRTG 3 cut(s) 795, 855, 1017
MspA1I CMGCKG 1 cut(s) 383
MspCI CTTAAG 1 cut(s) 140
MspI CCGG 1 cut(s) 10
MspR9I CCNGG 4 cut(s) 11, 720, 756, 1395
MunI CAATTG 1 cut(s) 1698
MvaI CCWGG 3 cut(s) 720, 756, 1395
MvnI CGCG 1 cut(s) 383
MwoI GCNNNNNNNGC 5 cut(s) 278, 383, 1121, 1124, 1718
NciI CCSGG 1 cut(s) 11
NcoI CCATGG 1 cut(s) 1790
NdeI CATATG 1 cut(s) 1110
NdeII GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
NheI GCTAGC 1 cut(s) 233
NlaIII CATG 9 cut(s) 510, 794, 854, 1001, 1022, 1046, 1338, 1558, 1794
NlaIV GGNNCC 4 cut(s) 465, 512, 709, 1674
NmuCI GTSAC 3 cut(s) 179, 495, 1072
NsiI ATGCAT 3 cut(s) 374, 1299, 1723
PciSI GCTCTTC 1 cut(s) 1170
PdmI GAANNNNTTC 2 cut(s) 694, 804
PfeI GAWTC 3 cut(s) 29, 428, 1144
PflFI GACNNNGTC 1 cut(s) 257
PfoI TCCNGGA 1 cut(s) 718
PleI GAGTC 3 cut(s) 93, 729, 1578
PpsI GAGTC 3 cut(s) 93, 729, 1578
Ppu21I YACGTR 1 cut(s) 644
PsiI TTATAA 1 cut(s) 941
Psp6I CCWGG 3 cut(s) 718, 754, 1393
PspGI CCWGG 3 cut(s) 718, 754, 1393
PspN4I GGNNCC 4 cut(s) 465, 512, 709, 1674
PspPI GGNCC 1 cut(s) 40
PstNI CAGNNNCTG 2 cut(s) 392, 613
PsuI RGATCY 2 cut(s) 389, 1678
PsyI GACNNNGTC 1 cut(s) 257
RsaI GTAC 2 cut(s) 512, 646
RsaNI GTAC 2 cut(s) 511, 645
RseI CAYNNNNRTG 3 cut(s) 795, 855, 1017
SacII CCGCGG 1 cut(s) 384
SapI GCTCTTC 1 cut(s) 1170
SaqAI TTAA 6 cut(s) 141, 741, 762, 785, 1292, 1433
Sau3AI GATC 6 cut(s) 389, 870, 1087, 1408, 1661, 1678
Sau96I GGNCC 1 cut(s) 40
SchI GAGTC 3 cut(s) 93, 729, 1578
ScrFI CCNGG 4 cut(s) 11, 720, 756, 1395
SexAI ACCWGGT 1 cut(s) 1393
SfaNI GCATC 5 cut(s) 15, 585, 889, 1306, 1619
SfcI CTRYAG 1 cut(s) 393
Sfr303I CCGCGG 1 cut(s) 384
SgrBI CCGCGG 1 cut(s) 384
SmiI ATTTAAAT 1 cut(s) 786
SmiMI CAYNNNNRTG 3 cut(s) 795, 855, 1017
SmlI CTYRAG 2 cut(s) 140, 1260
SmoI CTYRAG 2 cut(s) 140, 1260
SsiI CCGC 3 cut(s) 60, 381, 383
SspI AATATT 1 cut(s) 1269
SspMI CTAG 5 cut(s) 234, 812, 929, 1037, 1148
StyD4I CCNGG 4 cut(s) 9, 718, 754, 1393
StyI CCWWGG 3 cut(s) 43, 636, 1790
SwaI ATTTAAAT 1 cut(s) 786
TaaI ACNGT 6 cut(s) 259, 442, 495, 609, 1366, 1533
TaiI ACGT 3 cut(s) 646, 1292, 1801
TaqI TCGA 5 cut(s) 27, 445, 555, 688, 985
TauI GCSGC 3 cut(s) 62, 383, 386
TfiI GAWTC 3 cut(s) 29, 428, 1144
Tru1I TTAA 6 cut(s) 141, 741, 762, 785, 1292, 1433
Tru9I TTAA 6 cut(s) 141, 741, 762, 785, 1292, 1433
TscAI CASTG 5 cut(s) 70, 262, 367, 1330, 1639
TseFI GTSAC 3 cut(s) 179, 495, 1072
TseI GCWGC 7 cut(s) 191, 272, 377, 479, 1115, 1124, 1379
Tsp45I GTSAC 3 cut(s) 179, 495, 1072
TspDTI ATGAA 8 cut(s) 108, 254, 281, 813, 1323, 1331, 1507, 1588
TspGWI ACGGA 1 cut(s) 1485
TspRI CASTG 5 cut(s) 70, 262, 367, 1330, 1639
Tth111I GACNNNGTC 1 cut(s) 257
Vha464I CTTAAG 1 cut(s) 140
XapI RAATTY 5 cut(s) 408, 559, 781, 834, 886
XcmI CCANNNNNNNNNTGG 1 cut(s) 350
XmiI GTMKAC 2 cut(s) 733, 1390
XmnI GAANNNNTTC 2 cut(s) 694, 804
XspI CTAG 5 cut(s) 234, 812, 929, 1037, 1148
Zsp2I ATGCAT 3 cut(s) 374, 1299, 1723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.