Rroxscaffold_1G00035680

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000157
Physical Location & Seq
Forward (+)
51848424 .. 51856371
7948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00035680.1

Sequence Viewer

Length: 1809 bp
ATGTCTATCCCACAAGAACAACATGCACCACCTATTGGGATCCAATTAACCACCACCATCGACATTTTGGCAGATTTACCTAAACCTAAGACACCTTCGCTTCATCTACTAGAACACAAAAATAGAGAGCTATACCTTAAGATATGTGTGCCTCTATATAAATATGCACTAAAAGGTGATTGGGAAGCTGCTGAACAAATCTTGGGAAAGGATCGAACACTTTTGAGTGCTAGCATATCAAGAGGATGGGACACTGTCCTACATATTGCTGCTGGAGCAAGACATATTCACTTCGTGGAGAAACTGGTCGAAATCATGGACAAAGAAGACTTGGCACTCCAAGACATAAATGGAAACACTGCCCTATGCATTGCTGCTGCGGCAGGATCTGTAGAGATTGTCCAAATTTTGATAAAACATAATGATTCTTTGTTGACAATTCGAGGAGGTCAAAAAATGGCGCCACCCTATATGGCTGCTGCGTTAGGACAGTCAGAAATGGCATGGTACCTGTACCCTAAAAGTAAAAGGATGTTGGAGAAGACTGACCTCGAAAACTTGTTCTTTTCGTGCATCAACAATGGTTTGTATGATTTAGCCTTACAGTTGCTAGATACTAATACAGCATTAGCCCAGGCACGTACTGATAGGCCGAAAAATAAAACAGCCTTGCATATCTTGGCTCGAAGGACTTCAGTATTCAGAACCCAAAGTCCAGGAATGTGGGGTAGACTAATTAAATCATGCCTCCCAAGTTTTAAGTTTGCATTCAAAAGAAATTTGAATCAAGCTGATGAAGCACTTCAGCTAGTCCAACGCCTTTGGGAAGAAATTTTGAAAGATGACCATGATGACGTGATGAGGCTGATCAAATATCCCTCAAATTTAATATTTGATGCAGCAAAAATAGGGAATTATGAGTTCTTGGCAGTGCTTATGAGCTCTTACCCTGAGTTAGTATGGGAAACTGATGAAAAAAATCGAACTATAATCCATGTCGCAGTTCTGCATCGTCATGCAAATATCTTCAATCTAGTGCATGAGATAGGCTCAATCAAGGATGTCATAGTGACTTTTGAGGATGATCAAGGTAATAATATAGTGCATATGGCTGCAAAAATAGCACCTCAAAATCAATTGAATCTAGTGTCGGGTGTAGCTCTTCAAATGCAGCGGGAGTTAGTATGGTTTGAGGAAGTAAAGAAGATTGTGCAACCTCAATATATAGAGATGGAAAACAAGAAAGGAATAACACCTCAAGAATTATTCACTAAGGAGCATCAGACGTTGATGCGTCAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCTTGCTCGTTGCGACTATTATTGCAACTGTTGTATTTTCAGCTGCATTTAGTATACCAGGTGGCACAGATGATCATACAGGAAAGCCAAACTTTTTGAAAGAAAAGGCGTTTTTATACTTTACTATAGCTGACGGAGTGGCACTTTTTTCCTCTTCAACTGCAATGCTGATGTTCTTGTTCATCCTCACCTCACGGTATGCAGAAAACGATTTCCTCATGTCCTTGCCCTTGAAGTTGATGATTGGGCTTACTTGCCTCTTCGTCTCAATAGCATCTATGATGATGGCTTTTAGCACTGCCTTCTATTTGTCTTGTCAATATGGATCAAGATGGATTCCAGATCTTATATTTTTCTTTGCAATTGTCCCTATTGCTTTATATGCATTTATGCAATTTCCTCTTGTGTCTGATATGTCATCTTCAACATTTTTTTCAAGTCTTCTATTTCAGCCATGGAAACATATGATATACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

602

Amino Acids

68.18

Weight (kDa)

6.64

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 56 - 141 9.8e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 87 - 174 5.2e-10 Ankyrin repeats (3 copies)
PGG PF13962 435 - 548 3.2e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 507
AccB1I GGYRCC 2 cut(s) 460, 507
AccB7I CCANNNNNTGG 1 cut(s) 35
AccI GTMKAC 2 cut(s) 730, 1387
AciI CCGC 2 cut(s) 380, 1174
AclWI GGATC 5 cut(s) 34, 47, 219, 394, 1666
AcsI RAATTY 4 cut(s) 405, 778, 831, 883
AcuI CTGAAG 2 cut(s) 678, 788
AcyI GRCGYC 1 cut(s) 461
AdeI CACNNNGTG 1 cut(s) 295
AfaI GTAC 3 cut(s) 509, 515, 643
AfiI CCNNNNNNNGG 1 cut(s) 35
AflII CTTAAG 1 cut(s) 137
AjiI CACGTC 1 cut(s) 856
AjnI CCWGG 3 cut(s) 633, 715, 1390
AloI GAACNNNNNNTCC 2 cut(s) 697, 729
AluBI AGCT 8 cut(s) 130, 188, 791, 808, 942, 1160, 1376, 1463
AluI AGCT 8 cut(s) 130, 188, 791, 808, 942, 1160, 1376, 1463
Alw21I GWGCWC 1 cut(s) 944
Alw26I GTCTC 1 cut(s) 1603
AlwI GGATC 5 cut(s) 34, 47, 219, 394, 1666
AlwNI CAGNNNCTG 1 cut(s) 389
AoxI GGCC 1 cut(s) 650
ApoI RAATTY 4 cut(s) 405, 778, 831, 883
Asp700I GAANNNNTTC 2 cut(s) 691, 801
Asp718I GGTACC 1 cut(s) 507
AspLEI GCGC 1 cut(s) 463
AsuHPI GGTGA 2 cut(s) 188, 1513
AsuNHI GCTAGC 1 cut(s) 230
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 2 cut(s) 460, 507
BanII GRGCYC 1 cut(s) 944
BbsI GAAGAC 3 cut(s) 333, 548, 1766
Bbv12I GWGCWC 1 cut(s) 944
BccI CCATC 5 cut(s) 65, 240, 1225, 1612, 1659
BciT130I CCWGG 3 cut(s) 635, 717, 1392
BclI TGATCA 3 cut(s) 867, 1084, 1405
BcoDI GTCTC 1 cut(s) 1603
BfaI CTAG 7 cut(s) 110, 231, 611, 809, 1034, 1145, 1807
BfmI CTRYAG 2 cut(s) 390, 1458
BfoI RGCGCY 1 cut(s) 464
BfrI CTTAAG 1 cut(s) 137
BglII AGATCT 1 cut(s) 1675
Bme1390I CCNGG 3 cut(s) 635, 717, 1392
BmgBI CACGTC 1 cut(s) 856
BmiI GGNNCC 3 cut(s) 41, 462, 509
BmrFI CCNGG 3 cut(s) 635, 717, 1392
BmsI GCATC 6 cut(s) 582, 886, 1018, 1281, 1288, 1616
BmtI GCTAGC 1 cut(s) 234
BpiI GAAGAC 3 cut(s) 333, 548, 1766
BplI GAGNNNNNCTC 2 cut(s) 1034, 1066
BpmI CTGGAG 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 1242
BsaAI YACGTR 1 cut(s) 641
BsaHI GRCGYC 1 cut(s) 461
BsaJI CCNNGG 2 cut(s) 633, 1787
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse1I ACTGG 1 cut(s) 309
Bse3DI GCAATG 2 cut(s) 369, 1503
BseBI CCWGG 3 cut(s) 635, 717, 1392
BseDI CCNNGG 2 cut(s) 633, 1787
BseGI GGATG 6 cut(s) 251, 537, 1066, 1087, 1317, 1515
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMI GCAATG 2 cut(s) 369, 1503
BseMII CTCAG 1 cut(s) 942
BseNI ACTGG 1 cut(s) 309
BseRI GAGGAG 1 cut(s) 459
BshFI GGCC 1 cut(s) 652
BshNI GGYRCC 2 cut(s) 460, 507
BsiHKAI GWGCWC 1 cut(s) 944
BslFI GGGAC 2 cut(s) 263, 1685
BslI CCNNNNNNNGG 1 cut(s) 35
BsmAI GTCTC 1 cut(s) 1603
BsmBI CGTCTC 1 cut(s) 1603
BsmFI GGGAC 2 cut(s) 263, 1685
BsmI GAATGC 1 cut(s) 767
BsnI GGCC 1 cut(s) 652
Bsp1286I GDGCHC 1 cut(s) 944
Bsp143I GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
Bsp19I CCATGG 1 cut(s) 1787
BspACI CCGC 2 cut(s) 380, 1174
BspANI GGCC 1 cut(s) 652
BspCNI CTCAG 1 cut(s) 943
BspLI GGNNCC 3 cut(s) 41, 462, 509
BspOI GCTAGC 1 cut(s) 234
BspPI GGATC 5 cut(s) 34, 47, 219, 394, 1666
BspQI GCTCTTC 1 cut(s) 1167
BspT107I GGYRCC 2 cut(s) 460, 507
BspTI CTTAAG 1 cut(s) 137
BsrDI GCAATG 2 cut(s) 369, 1503
BsrI ACTGG 1 cut(s) 309
BssECI CCNNGG 2 cut(s) 633, 1787
BssMI GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
BssNAI GTATAC 1 cut(s) 1388
BssNI GRCGYC 1 cut(s) 461
BssT1I CCWWGG 1 cut(s) 1787
Bst1107I GTATAC 1 cut(s) 1388
Bst2UI CCWGG 3 cut(s) 635, 717, 1392
Bst4CI ACNGT 5 cut(s) 256, 492, 606, 1363, 1530
Bst6I CTCTTC 3 cut(s) 1167, 1492, 1598
BstACI GRCGYC 1 cut(s) 461
BstAFI CTTAAG 1 cut(s) 137
BstBAI YACGTR 1 cut(s) 641
BstC8I GCNNGC 2 cut(s) 232, 1337
BstDEI CTNAG 3 cut(s) 87, 951, 1272
BstDSI CCRYGG 1 cut(s) 1787
BstF5I GGATG 6 cut(s) 251, 537, 1066, 1087, 1317, 1515
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 1 cut(s) 463
BstKTI GATC 8 cut(s) 42, 214, 389, 870, 1087, 1408, 1661, 1678
BstMAI GTCTC 1 cut(s) 1603
BstMBI GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
BstMWI GCNNNNNNNGC 5 cut(s) 275, 380, 797, 1121, 1715
BstNI CCWGG 3 cut(s) 635, 717, 1392
BstNSI RCATGY 1 cut(s) 26
BstSCI CCNGG 3 cut(s) 633, 715, 1390
BstSFI CTRYAG 2 cut(s) 390, 1458
BstV2I GAAGAC 3 cut(s) 333, 548, 1766
BstX2I RGATCY 3 cut(s) 39, 386, 1675
BstXI CCANNNNNNTGG 1 cut(s) 723
BstYI RGATCY 3 cut(s) 39, 386, 1675
BstZ17I GTATAC 1 cut(s) 1388
BsuRI GGCC 1 cut(s) 652
BtgI CCRYGG 1 cut(s) 1787
BtrI CACGTC 1 cut(s) 856
BtsCI GGATG 6 cut(s) 251, 537, 1066, 1087, 1317, 1515
BtsI GCAGTG 4 cut(s) 357, 936, 1320, 1629
BtsIMutI CAGTG 5 cut(s) 252, 357, 936, 1320, 1629
Cac8I GCNNGC 2 cut(s) 232, 1337
CaiI CAGNNNCTG 1 cut(s) 389
CfoI GCGC 1 cut(s) 463
CseI GACGC 1 cut(s) 1283
CsiI ACCWGGT 1 cut(s) 1390
Csp6I GTAC 3 cut(s) 508, 514, 642
CviQI GTAC 3 cut(s) 508, 514, 642
DdeI CTNAG 3 cut(s) 87, 951, 1272
DinI GGCGCC 1 cut(s) 462
DpnI GATC 8 cut(s) 41, 213, 388, 869, 1086, 1407, 1660, 1677
DpnII GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
DraIII CACNNNGTG 1 cut(s) 295
Eam1104I CTCTTC 3 cut(s) 1167, 1492, 1598
EarI CTCTTC 3 cut(s) 1167, 1492, 1598
Ecl136II GAGCTC 1 cut(s) 942
Eco130I CCWWGG 1 cut(s) 1787
Eco24I GRGCYC 1 cut(s) 944
Eco53kI GAGCTC 1 cut(s) 942
Eco57I CTGAAG 2 cut(s) 678, 788
EcoICRI GAGCTC 1 cut(s) 942
EcoRII CCWGG 3 cut(s) 633, 715, 1390
EcoT14I CCWWGG 1 cut(s) 1787
EcoT22I ATGCAT 2 cut(s) 371, 1720
EcoT38I GRGCYC 1 cut(s) 944
EgeI GGCGCC 1 cut(s) 462
EheI GGCGCC 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 1787
Esp3I CGTCTC 1 cut(s) 1603
FalI AAGNNNNNCTT 2 cut(s) 1409, 1441
FaqI GGGAC 2 cut(s) 263, 1685
FauI CCCGC 1 cut(s) 1167
FauNDI CATATG 2 cut(s) 1107, 1797
FbaI TGATCA 3 cut(s) 867, 1084, 1405
FblI GTMKAC 2 cut(s) 730, 1387
FokI GGATG 6 cut(s) 258, 544, 1073, 1094, 1324, 1502
FriOI GRGCYC 1 cut(s) 944
FspBI CTAG 7 cut(s) 110, 231, 611, 809, 1034, 1145, 1807
GlaI GCGC 1 cut(s) 462
GsuI CTGGAG 1 cut(s) 294
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 1 cut(s) 652
HgaI GACGC 1 cut(s) 1283
HhaI GCGC 1 cut(s) 463
Hin1I GRCGYC 1 cut(s) 461
Hin6I GCGC 1 cut(s) 461
HinP1I GCGC 1 cut(s) 461
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HinfI GANTC 4 cut(s) 425, 784, 1141, 1669
HphI GGTGA 2 cut(s) 188, 1513
Hpy166II GTNNAC 3 cut(s) 435, 731, 1388
Hpy188I TCNGA 4 cut(s) 496, 704, 1284, 1744
Hpy188III TCNNGA 4 cut(s) 240, 1259, 1662, 1673
Hpy8I GTNNAC 3 cut(s) 435, 731, 1388
HpyAV CCTTC 4 cut(s) 105, 681, 1309, 1645
HpyCH4III ACNGT 5 cut(s) 256, 492, 606, 1363, 1530
HpyCH4IV ACGT 3 cut(s) 640, 855, 1286
HpyF10VI GCNNNNNNNGC 5 cut(s) 275, 380, 797, 1121, 1715
HpyF3I CTNAG 3 cut(s) 87, 951, 1272
HpySE526I ACGT 3 cut(s) 640, 855, 1286
Hsp92I GRCGYC 1 cut(s) 461
HspAI GCGC 1 cut(s) 461
KasI GGCGCC 1 cut(s) 460
KpnI GGTACC 1 cut(s) 511
Ksp22I TGATCA 3 cut(s) 867, 1084, 1405
Kzo9I GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
LguI GCTCTTC 1 cut(s) 1167
LmnI GCTCC 2 cut(s) 275, 1276
LweI GCATC 6 cut(s) 582, 886, 1018, 1281, 1288, 1616
MabI ACCWGGT 1 cut(s) 1390
MaeI CTAG 7 cut(s) 110, 231, 611, 809, 1034, 1145, 1807
MaeII ACGT 3 cut(s) 640, 855, 1286
MaeIII GTNAC 1 cut(s) 1069
MalI GATC 8 cut(s) 41, 213, 388, 869, 1086, 1407, 1660, 1677
MboI GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
MfeI CAATTG 2 cut(s) 1136, 1695
MflI RGATCY 3 cut(s) 39, 386, 1675
MhlI GDGCHC 1 cut(s) 944
Mly113I GGCGCC 1 cut(s) 461
MmeI TCCRAC 2 cut(s) 516, 838
Mph1103I ATGCAT 2 cut(s) 371, 1720
MroXI GAANNNNTTC 2 cut(s) 691, 801
MseI TTAA 5 cut(s) 47, 138, 738, 759, 887
MslI CAYNNNNRTG 1 cut(s) 1014
MspA1I CMGCKG 2 cut(s) 1174, 1376
MspCI CTTAAG 1 cut(s) 137
MspR9I CCNGG 3 cut(s) 635, 717, 1392
MunI CAATTG 2 cut(s) 1136, 1695
Mva1269I GAATGC 1 cut(s) 767
MvaI CCWGG 3 cut(s) 635, 717, 1392
MwoI GCNNNNNNNGC 5 cut(s) 275, 380, 797, 1121, 1715
NarI GGCGCC 1 cut(s) 461
NcoI CCATGG 1 cut(s) 1787
NdeI CATATG 2 cut(s) 1107, 1797
NdeII GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
NheI GCTAGC 1 cut(s) 230
NlaIV GGNNCC 3 cut(s) 41, 462, 509
NmuCI GTSAC 1 cut(s) 1069
NsiI ATGCAT 2 cut(s) 371, 1720
NspI RCATGY 1 cut(s) 26
PciSI GCTCTTC 1 cut(s) 1167
PctI GAATGC 1 cut(s) 767
PdmI GAANNNNTTC 2 cut(s) 691, 801
PfeI GAWTC 4 cut(s) 425, 784, 1141, 1669
PflFI GACNNNGTC 1 cut(s) 254
PflMI CCANNNNNTGG 1 cut(s) 35
PfoI TCCNGGA 1 cut(s) 715
PluTI GGCGCC 1 cut(s) 464
Ppu21I YACGTR 1 cut(s) 641
Psp124BI GAGCTC 1 cut(s) 944
Psp6I CCWGG 3 cut(s) 633, 715, 1390
PspGI CCWGG 3 cut(s) 633, 715, 1390
PspN4I GGNNCC 3 cut(s) 41, 462, 509
PstNI CAGNNNCTG 1 cut(s) 389
PsuI RGATCY 3 cut(s) 39, 386, 1675
PsyI GACNNNGTC 1 cut(s) 254
PvuII CAGCTG 1 cut(s) 1376
RsaI GTAC 3 cut(s) 509, 515, 643
RsaNI GTAC 3 cut(s) 508, 514, 642
RseI CAYNNNNRTG 1 cut(s) 1014
SacI GAGCTC 1 cut(s) 944
SapI GCTCTTC 1 cut(s) 1167
SaqAI TTAA 5 cut(s) 47, 138, 738, 759, 887
Sau3AI GATC 8 cut(s) 39, 211, 386, 867, 1084, 1405, 1658, 1675
ScrFI CCNGG 3 cut(s) 635, 717, 1392
SduI GDGCHC 1 cut(s) 944
SexAI ACCWGGT 1 cut(s) 1390
SfaNI GCATC 6 cut(s) 582, 886, 1018, 1281, 1288, 1616
SfcI CTRYAG 2 cut(s) 390, 1458
SfoI GGCGCC 1 cut(s) 462
SmiMI CAYNNNNRTG 1 cut(s) 1014
SmlI CTYRAG 2 cut(s) 137, 1257
SmoI CTYRAG 2 cut(s) 137, 1257
SsiI CCGC 2 cut(s) 380, 1174
SspDI GGCGCC 1 cut(s) 460
SspI AATATT 1 cut(s) 891
SspMI CTAG 7 cut(s) 110, 231, 611, 809, 1034, 1145, 1807
SstI GAGCTC 1 cut(s) 944
StyD4I CCNGG 3 cut(s) 633, 715, 1390
StyI CCWWGG 1 cut(s) 1787
TaaI ACNGT 5 cut(s) 256, 492, 606, 1363, 1530
TaiI ACGT 3 cut(s) 643, 858, 1289
TaqI TCGA 7 cut(s) 60, 214, 309, 442, 552, 685, 982
TauI GCSGC 1 cut(s) 383
TfiI GAWTC 4 cut(s) 425, 784, 1141, 1669
Tru1I TTAA 5 cut(s) 47, 138, 738, 759, 887
Tru9I TTAA 5 cut(s) 47, 138, 738, 759, 887
TscAI CASTG 5 cut(s) 259, 364, 936, 1327, 1636
TseFI GTSAC 1 cut(s) 1069
Tsp45I GTSAC 1 cut(s) 1069
TspDTI ATGAA 6 cut(s) 92, 810, 987, 1320, 1328, 1504
TspGWI ACGGA 1 cut(s) 1482
TspRI CASTG 5 cut(s) 259, 364, 936, 1327, 1636
Tth111I GACNNNGTC 1 cut(s) 254
Van91I CCANNNNNTGG 1 cut(s) 35
Vha464I CTTAAG 1 cut(s) 137
XapI RAATTY 4 cut(s) 405, 778, 831, 883
XceI RCATGY 1 cut(s) 26
XcmI CCANNNNNNNNNTGG 2 cut(s) 64, 347
XmiI GTMKAC 2 cut(s) 730, 1387
XmnI GAANNNNTTC 2 cut(s) 691, 801
XspI CTAG 7 cut(s) 110, 231, 611, 809, 1034, 1145, 1807
Zsp2I ATGCAT 2 cut(s) 371, 1720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.