Rw5G028170

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
42423624 .. 42428126
4503 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028170.1

Sequence Viewer

Length: 2085 bp
ATGGATCTATTCTTTACTACTAATTATTATTCGGTATTAGTATTACTAATCTATGAGGGTCCTTATATGAGGATCTATTCTTTTCTACTAATTATTGTGTATTGTGGAAAGAAATTTCCTACCAATTTCCCTAGTGACTTTCAACTAGCTCGTCGCGTACGCTGGCTCGATCTTGGCCGGTGCATGCATGCTTGTATCTTTACACAATTTGTTCAATCTGGAACCATGGCTACCCCACAAGCACAACATATATCACCTGCCGGGATTCAATTAACCACGGCTAGCGGGAATTCAGCAACTGGGCTAGATAGTCAATCAGCGGACATTGGCATCGACATTTCTGCTGATTCGGCTCAACCTACCAGACCTTTGCCTTATCTACTAGAACATATAAATAGAGAAGAATACCTTAAGACATGTGTTGCCCTCTATAAGTATGCACTAAAGGGCGATTGGGAAGCTGCGGAACGAATCTTGAAAAAGGATACGAAACTTCTGAGAGCAAGCATATCTAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGGGCAAGACGTATTCATTTTGTGGAGAAACTGATCAGCATGATGAACGTAGAGGATTTGGCACTGCAGGACGTAAATGGAAACACTGCCTTGTGTATTGCCGCTGCGGCTGGATCTCTAGACATTGTCCAGATTTTGATACAAAAGAATATGTCTTTACTATCGATTCGAGGCGGTAAAGATATGACACCAGCCTACATGGCTGTTGTGTTGGGACAGTCAGAAATGGCATGGCACCTGTACGCTGAAAGTAACACGATGTTGGAGAAAACAGACCGCGAAAACTTGTTTTTTTCTTGCATCAACAATTGTTTGTATGATTTGGCCTTACCGTTGCTAAATGATGATAGAACATTAGCGACTGCACGTACTAAATCGCAGAAATATAAAACAGCCTTGCATATATTGGCTAGAAGGCCTTCAGCATTTGGTGGCAGCCAAAGTCCAGGAATGTGGAGTAGACTTACTAACTCATTCCTCCCAAGTTTGAAGTTTGCTTGCAAAAAAAAGTTAAAACAAGCTAATGAAGCCCTTCAACTAGTCCAACGTCTTTGGGAAGAAATTTTAAAAGATGAGCACGAAGACGTGATGAGGTTGATCAAATATCCTTCAAATTTATTATTTGACGCAGCAGAATTAGGGAATTATGAGTTTCTGGCGGCACTTATGAGCTCTTATCCTGAGTTGGTATGGGAAACTGATGAAAAAAATCGAACCATTGTCCATGTCGCAGTTCTGCATCGTCATGCAAGTATCTTTAATCTAGTGCATGAAATAGGCTCGATCAAAGATGTCATAGTGACATATGAGGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAGTTGAATCTAGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAAATTGTTCAACCTCAGTATATAGAGATGGAAAACCAACAAGGAAAAACACCTCAAGAATTATTCACTAAGGAGCATAGGGCGCTAATGCGTCAAGGAGAATCATGGATGAAAGACACTGCAACTTCATGCTTGCTCGTTGCAACTATTATTGCAACTGTTGTGTTTTCAGCTGCATTTAGCGTACCAGGTGGCACAGATGATCATACCGGAAAGCCCAACTTCTTAAAAGAGAAAATGTTTTTATACTTTACCATAGCCGATGGACTAGCACTCTTTTCCTCTTCAACTGCAATGCTAATGTTCTTGTTCATCCTAACCTCGCGGTACGCAGAAAACGATTTTCTCAAATCCTTACCATTGAAGTTGATGATAGGACTCACTTCCCTGTTCATCTCTATAGCATCCATGATGATGGCTTTCAGCACCGCCTTCTATTTGTCTTGTCAATATGAATCAAGATGGGTTTCAGATTTTACATTTTTATTTGCACTTGTCCCAGTTGCTTTGTTTGCGTTTATGCAATTCCCTCTCGTGTCCGACATGTCCTCTTCTATATTTTGCTCAAGTTTGTTATTTCAGCCGTGGAAACACATGCTCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

694

Amino Acids

78.39

Weight (kDa)

6.64

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 147 - 233 5.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 178 - 265 1e-09 Ankyrin repeats (3 copies)
PGG PF13962 528 - 640 1.8e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 265
Acc36I ACCTGC 1 cut(s) 265
AccB1I GGYRCC 1 cut(s) 780
AccI GTMKAC 1 cut(s) 1006
AccII CGCG 3 cut(s) 156, 825, 1804
AclWI GGATC 3 cut(s) 12, 80, 667
AcoI YGGCCR 1 cut(s) 175
AcsI RAATTY 4 cut(s) 113, 289, 1107, 1159
AcuI CTGAAG 1 cut(s) 951
AfaI GTAC 5 cut(s) 159, 788, 916, 1665, 1808
AflII CTTAAG 1 cut(s) 410
AflIII ACRYGT 2 cut(s) 416, 2022
AhlI ACTAGT 1 cut(s) 1084
AjiI CACGTC 1 cut(s) 1132
AjnI CCWGG 2 cut(s) 991, 1666
AluBI AGCT 6 cut(s) 149, 461, 1067, 1218, 1436, 1652
AluI AGCT 6 cut(s) 149, 461, 1067, 1218, 1436, 1652
Alw21I GWGCWC 2 cut(s) 1125, 1220
AlwI GGATC 3 cut(s) 12, 80, 667
AlwNI CAGNNNCTG 1 cut(s) 299
AoxI GGCC 3 cut(s) 175, 870, 962
ApeKI GCWGC 7 cut(s) 461, 542, 650, 981, 1175, 1388, 1652
ApoI RAATTY 4 cut(s) 113, 289, 1107, 1159
Asp700I GAANNNNTTC 2 cut(s) 964, 1077
AspLEI GCGC 1 cut(s) 1564
AspS9I GGNCC 1 cut(s) 59
AsuC2I CCSGG 1 cut(s) 262
AsuHPI GGTGA 1 cut(s) 246
AsuNHI GCTAGC 1 cut(s) 281
AvaII GGWCC 1 cut(s) 59
BanI GGYRCC 1 cut(s) 780
BanII GRGCYC 1 cut(s) 1220
BauI CACGAG 1 cut(s) 2012
BbsI GAAGAC 1 cut(s) 1134
Bbv12I GWGCWC 2 cut(s) 1125, 1220
BbvI GCAGC 7 cut(s) 448, 554, 637, 993, 1187, 1375, 1639
BccI CCATC 4 cut(s) 1501, 1736, 1888, 1935
BceAI ACGGC 2 cut(s) 294, 2047
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BciT130I CCWGG 2 cut(s) 993, 1668
BciVI GTATCC 1 cut(s) 478
BclI TGATCA 4 cut(s) 579, 1143, 1360, 1681
BcnI CCSGG 1 cut(s) 262
BcuI ACTAGT 1 cut(s) 1084
BfmI CTRYAG 2 cut(s) 611, 1878
BfoI RGCGCY 1 cut(s) 1565
BfrI CTTAAG 1 cut(s) 410
BfuAI ACCTGC 1 cut(s) 265
BfuI GTATCC 1 cut(s) 478
BglI GCCNNNNNGGC 2 cut(s) 653, 746
Bme1390I CCNGG 3 cut(s) 262, 993, 1668
Bme18I GGWCC 1 cut(s) 59
BmgBI CACGTC 1 cut(s) 1132
BmgT120I GGNCC 1 cut(s) 59
BmiI GGNNCC 3 cut(s) 60, 223, 782
BmrFI CCNGG 3 cut(s) 262, 993, 1668
BmrI ACTGGG 2 cut(s) 309, 1973
BmsI GCATC 5 cut(s) 339, 855, 1294, 1456, 1892
BmtI GCTAGC 1 cut(s) 285
BmuI ACTGGG 2 cut(s) 309, 1973
BpiI GAAGAC 1 cut(s) 1134
BpuEI CTTGAG 2 cut(s) 1518, 2029
BpuMI CCSGG 1 cut(s) 262
Bsa29I ATCGAT 1 cut(s) 710
BsaAI YACGTR 1 cut(s) 914
BsaJI CCNNGG 3 cut(s) 225, 276, 2063
BsaWI WCCGGW 1 cut(s) 1688
Bse118I RCCGGY 1 cut(s) 177
Bse1I ACTGG 2 cut(s) 304, 1979
Bse3DI GCAATG 1 cut(s) 1779
BseBI CCWGG 2 cut(s) 993, 1668
BseCI ATCGAT 1 cut(s) 710
BseDI CCNNGG 3 cut(s) 225, 276, 2063
BseGI GGATG 4 cut(s) 1363, 1593, 1791, 1883
BseMI GCAATG 1 cut(s) 1779
BseMII CTCAG 3 cut(s) 488, 1218, 1508
BseNI ACTGG 2 cut(s) 304, 1979
BseXI GCAGC 7 cut(s) 448, 554, 637, 993, 1187, 1375, 1639
BsgI GTGCAG 1 cut(s) 894
Bsh1236I CGCG 3 cut(s) 156, 825, 1804
BshFI GGCC 3 cut(s) 177, 872, 964
BshNI GGYRCC 1 cut(s) 780
BshVI ATCGAT 1 cut(s) 710
BsiHKAI GWGCWC 2 cut(s) 1125, 1220
BsiSI CCGG 3 cut(s) 178, 261, 1689
BsiWI CGTACG 1 cut(s) 157
BslFI GGGAC 2 cut(s) 774, 1961
BsmFI GGGAC 2 cut(s) 774, 1961
BsnI GGCC 3 cut(s) 177, 872, 964
Bsp1286I GDGCHC 2 cut(s) 1125, 1220
Bsp143I GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
Bsp19I CCATGG 1 cut(s) 225
BspANI GGCC 3 cut(s) 177, 872, 964
BspCNI CTCAG 3 cut(s) 489, 1219, 1507
BspDI ATCGAT 1 cut(s) 710
BspFNI CGCG 3 cut(s) 156, 825, 1804
BspLI GGNNCC 3 cut(s) 60, 223, 782
BspMAI CTGCAG 1 cut(s) 615
BspMI ACCTGC 1 cut(s) 265
BspOI GCTAGC 1 cut(s) 285
BspPI GGATC 3 cut(s) 12, 80, 667
BspQI GCTCTTC 1 cut(s) 1443
BspT107I GGYRCC 1 cut(s) 780
BspTI CTTAAG 1 cut(s) 410
BsrDI GCAATG 1 cut(s) 1779
BsrFI RCCGGY 1 cut(s) 177
BsrI ACTGG 2 cut(s) 304, 1979
BssAI RCCGGY 1 cut(s) 177
BssECI CCNNGG 3 cut(s) 225, 276, 2063
BssMI GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
BssSI CACGAG 1 cut(s) 2012
BssT1I CCWWGG 1 cut(s) 225
Bst2BI CACGAG 1 cut(s) 2012
Bst2UI CCWGG 2 cut(s) 993, 1668
Bst4CI ACNGT 4 cut(s) 529, 765, 879, 1639
Bst6I CTCTTC 3 cut(s) 1443, 1768, 2035
BstAFI CTTAAG 1 cut(s) 410
BstBAI YACGTR 1 cut(s) 914
BstC8I GCNNGC 7 cut(s) 164, 185, 189, 283, 505, 1045, 1613
BstDEI CTNAG 4 cut(s) 497, 1227, 1494, 1548
BstDSI CCRYGG 3 cut(s) 225, 276, 2063
BstF5I GGATG 4 cut(s) 1363, 1593, 1791, 1883
BstFNI CGCG 3 cut(s) 156, 825, 1804
BstH2I RGCGCY 1 cut(s) 1565
BstHHI GCGC 1 cut(s) 1564
BstKTI GATC 9 cut(s) 7, 75, 172, 582, 662, 1146, 1332, 1363, 1684
BstMBI GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
BstMWI GCNNNNNNNGC 8 cut(s) 350, 548, 653, 746, 1073, 1397, 1561, 1991
BstNI CCWGG 2 cut(s) 993, 1668
BstNSI RCATGY 5 cut(s) 187, 191, 420, 2026, 2077
BstSCI CCNGG 3 cut(s) 260, 991, 1666
BstSFI CTRYAG 2 cut(s) 611, 1878
BstUI CGCG 3 cut(s) 156, 825, 1804
BstV1I GCAGC 7 cut(s) 448, 554, 637, 993, 1187, 1375, 1639
BstV2I GAAGAC 1 cut(s) 1134
BstX2I RGATCY 3 cut(s) 4, 72, 659
BstXI CCANNNNNNTGG 2 cut(s) 999, 1894
BstYI RGATCY 3 cut(s) 4, 72, 659
Bsu15I ATCGAT 1 cut(s) 710
BsuI GTATCC 1 cut(s) 478
BsuRI GGCC 3 cut(s) 177, 872, 964
BsuTUI ATCGAT 1 cut(s) 710
BtgI CCRYGG 3 cut(s) 225, 276, 2063
BtrI CACGTC 1 cut(s) 1132
BtsCI GGATG 4 cut(s) 1363, 1593, 1791, 1883
BtsI GCAGTG 3 cut(s) 608, 630, 1596
BtsIMutI CAGTG 3 cut(s) 608, 630, 1596
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 7 cut(s) 164, 185, 189, 283, 505, 1045, 1613
CaiI CAGNNNCTG 1 cut(s) 299
CfoI GCGC 1 cut(s) 1564
Cfr10I RCCGGY 1 cut(s) 177
Cfr13I GGNCC 1 cut(s) 59
ClaI ATCGAT 1 cut(s) 710
CseI GACGC 2 cut(s) 1181, 1559
CsiI ACCWGGT 1 cut(s) 1666
Csp6I GTAC 5 cut(s) 158, 787, 915, 1664, 1807
CviQI GTAC 5 cut(s) 158, 787, 915, 1664, 1807
DdeI CTNAG 4 cut(s) 497, 1227, 1494, 1548
DpnI GATC 9 cut(s) 6, 74, 171, 581, 661, 1145, 1331, 1362, 1683
DpnII GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
DraI TTTAAA 1 cut(s) 1113
EaeI YGGCCR 1 cut(s) 175
Eam1104I CTCTTC 3 cut(s) 1443, 1768, 2035
EarI CTCTTC 3 cut(s) 1443, 1768, 2035
Ecl136II GAGCTC 1 cut(s) 1218
Eco130I CCWWGG 1 cut(s) 225
Eco147I AGGCCT 1 cut(s) 964
Eco24I GRGCYC 1 cut(s) 1220
Eco47I GGWCC 1 cut(s) 59
Eco53kI GAGCTC 1 cut(s) 1218
Eco57I CTGAAG 1 cut(s) 951
EcoICRI GAGCTC 1 cut(s) 1218
EcoO109I RGGNCCY 1 cut(s) 59
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 2 cut(s) 991, 1666
EcoT14I CCWWGG 1 cut(s) 225
EcoT22I ATGCAT 2 cut(s) 189, 1449
EcoT38I GRGCYC 1 cut(s) 1220
ErhI CCWWGG 1 cut(s) 225
FalI AAGNNNNNCTT 4 cut(s) 393, 425, 1685, 1717
FaqI GGGAC 2 cut(s) 774, 1961
FauI CCCGC 1 cut(s) 278
FauNDI CATATG 2 cut(s) 1351, 1383
FbaI TGATCA 4 cut(s) 579, 1143, 1360, 1681
FblI GTMKAC 1 cut(s) 1006
FokI GGATG 4 cut(s) 1370, 1600, 1778, 1870
FriOI GRGCYC 1 cut(s) 1220
GlaI GCGC 1 cut(s) 1563
HaeII RGCGCY 1 cut(s) 1565
HaeIII GGCC 3 cut(s) 177, 872, 964
HapII CCGG 3 cut(s) 178, 261, 1689
HgaI GACGC 2 cut(s) 1181, 1559
HhaI GCGC 1 cut(s) 1564
Hin6I GCGC 1 cut(s) 1562
HinP1I GCGC 1 cut(s) 1562
HinfI GANTC 8 cut(s) 265, 347, 471, 712, 1417, 1580, 1857, 1934
HpaII CCGG 3 cut(s) 178, 261, 1689
HphI GGTGA 1 cut(s) 246
Hpy166II GTNNAC 1 cut(s) 1007
Hpy188I TCNGA 4 cut(s) 498, 769, 1951, 2020
Hpy188III TCNNGA 9 cut(s) 219, 475, 513, 665, 676, 1226, 1451, 1535, 1938
Hpy8I GTNNAC 1 cut(s) 1007
Hpy99I CGWCG 1 cut(s) 156
HpyAV CCTTC 6 cut(s) 542, 954, 975, 1088, 1164, 1921
HpyCH4III ACNGT 4 cut(s) 529, 765, 879, 1639
HpyCH4IV ACGT 7 cut(s) 537, 556, 594, 618, 913, 1093, 1131
HpyF10VI GCNNNNNNNGC 8 cut(s) 350, 548, 653, 746, 1073, 1397, 1561, 1991
HpyF3I CTNAG 4 cut(s) 497, 1227, 1494, 1548
HpySE526I ACGT 7 cut(s) 537, 556, 594, 618, 913, 1093, 1131
HspAI GCGC 1 cut(s) 1562
Ksp22I TGATCA 4 cut(s) 579, 1143, 1360, 1681
Kzo9I GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
LguI GCTCTTC 1 cut(s) 1443
LmnI GCTCC 1 cut(s) 1552
Lsp1109I GCAGC 7 cut(s) 448, 554, 637, 993, 1187, 1375, 1639
LweI GCATC 5 cut(s) 339, 855, 1294, 1456, 1892
MabI ACCWGGT 1 cut(s) 1666
MaeII ACGT 7 cut(s) 537, 556, 594, 618, 913, 1093, 1131
MaeIII GTNAC 4 cut(s) 134, 797, 1345, 1367
MalI GATC 9 cut(s) 6, 74, 171, 581, 661, 1145, 1331, 1362, 1683
MboI GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
MboII GAAGA 6 cut(s) 413, 1115, 1139, 1430, 1755, 2022
MfeI CAATTG 1 cut(s) 853
MflI RGATCY 3 cut(s) 4, 72, 659
MhlI GDGCHC 2 cut(s) 1125, 1220
MlyI GAGTC 1 cut(s) 1851
MmeI TCCRAC 3 cut(s) 789, 1114, 2043
Mph1103I ATGCAT 2 cut(s) 189, 1449
MroXI GAANNNNTTC 2 cut(s) 964, 1077
MseI TTAA 6 cut(s) 272, 411, 1058, 1112, 1305, 1706
MslI CAYNNNNRTG 2 cut(s) 1290, 1892
MspA1I CMGCKG 3 cut(s) 320, 650, 1652
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 3 cut(s) 178, 261, 1689
MspR9I CCNGG 3 cut(s) 262, 993, 1668
MunI CAATTG 1 cut(s) 853
MvaI CCWGG 2 cut(s) 993, 1668
MvnI CGCG 3 cut(s) 156, 825, 1804
MwoI GCNNNNNNNGC 8 cut(s) 350, 548, 653, 746, 1073, 1397, 1561, 1991
NciI CCSGG 1 cut(s) 262
NcoI CCATGG 1 cut(s) 225
NdeI CATATG 2 cut(s) 1351, 1383
NdeII GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
NheI GCTAGC 1 cut(s) 281
NlaIV GGNNCC 3 cut(s) 60, 223, 782
NmuCI GTSAC 2 cut(s) 134, 1345
NsiI ATGCAT 2 cut(s) 189, 1449
NspI RCATGY 5 cut(s) 187, 191, 420, 2026, 2077
PaeI GCATGC 2 cut(s) 187, 191
PaqCI CACCTGC 1 cut(s) 265
PceI AGGCCT 1 cut(s) 964
PciI ACATGT 2 cut(s) 416, 2022
PciSI GCTCTTC 1 cut(s) 1443
PcsI WCGNNNNNNNCGW 1 cut(s) 1815
PdmI GAANNNNTTC 2 cut(s) 964, 1077
PfeI GAWTC 7 cut(s) 265, 347, 471, 712, 1417, 1580, 1934
Pfl23II CGTACG 1 cut(s) 157
PflFI GACNNNGTC 1 cut(s) 671
PfoI TCCNGGA 1 cut(s) 991
PleI GAGTC 1 cut(s) 1851
PpsI GAGTC 1 cut(s) 1851
Ppu21I YACGTR 1 cut(s) 914
PpuMI RGGWCCY 1 cut(s) 59
PscI ACATGT 2 cut(s) 416, 2022
Psp124BI GAGCTC 1 cut(s) 1220
Psp5II RGGWCCY 1 cut(s) 59
Psp6I CCWGG 2 cut(s) 991, 1666
PspGI CCWGG 2 cut(s) 991, 1666
PspLI CGTACG 1 cut(s) 157
PspN4I GGNNCC 3 cut(s) 60, 223, 782
PspPI GGNCC 1 cut(s) 59
PspPPI RGGWCCY 1 cut(s) 59
PsrI GAACNNNNNNTAC 2 cut(s) 214, 246
PstI CTGCAG 1 cut(s) 615
PstNI CAGNNNCTG 1 cut(s) 299
PsuI RGATCY 3 cut(s) 4, 72, 659
PsyI GACNNNGTC 1 cut(s) 671
PvuII CAGCTG 1 cut(s) 1652
RsaI GTAC 5 cut(s) 159, 788, 916, 1665, 1808
RsaNI GTAC 5 cut(s) 158, 787, 915, 1664, 1807
RseI CAYNNNNRTG 2 cut(s) 1290, 1892
SacI GAGCTC 1 cut(s) 1220
SapI GCTCTTC 1 cut(s) 1443
SaqAI TTAA 6 cut(s) 272, 411, 1058, 1112, 1305, 1706
Sau3AI GATC 9 cut(s) 4, 72, 169, 579, 659, 1143, 1329, 1360, 1681
Sau96I GGNCC 1 cut(s) 59
SchI GAGTC 1 cut(s) 1851
ScrFI CCNGG 3 cut(s) 262, 993, 1668
SduI GDGCHC 2 cut(s) 1125, 1220
SexAI ACCWGGT 1 cut(s) 1666
SfaNI GCATC 5 cut(s) 339, 855, 1294, 1456, 1892
SfcI CTRYAG 2 cut(s) 611, 1878
SinI GGWCC 1 cut(s) 59
SmiMI CAYNNNNRTG 2 cut(s) 1290, 1892
SmlI CTYRAG 3 cut(s) 410, 1533, 2044
SmoI CTYRAG 3 cut(s) 410, 1533, 2044
SpeI ACTAGT 1 cut(s) 1084
SphI GCATGC 2 cut(s) 187, 191
SseBI AGGCCT 1 cut(s) 964
SstI GAGCTC 1 cut(s) 1220
StuI AGGCCT 1 cut(s) 964
StyD4I CCNGG 3 cut(s) 260, 991, 1666
StyI CCWWGG 1 cut(s) 225
TaaI ACNGT 4 cut(s) 529, 765, 879, 1639
TaiI ACGT 7 cut(s) 540, 559, 597, 621, 916, 1096, 1134
TaqI TCGA 7 cut(s) 168, 333, 710, 715, 1258, 1328, 1450
TauI GCSGC 3 cut(s) 650, 656, 1208
TfiI GAWTC 7 cut(s) 265, 347, 471, 712, 1417, 1580, 1934
Tru1I TTAA 6 cut(s) 272, 411, 1058, 1112, 1305, 1706
Tru9I TTAA 6 cut(s) 272, 411, 1058, 1112, 1305, 1706
TscAI CASTG 3 cut(s) 615, 637, 1603
TseFI GTSAC 2 cut(s) 134, 1345
TseI GCWGC 7 cut(s) 461, 542, 650, 981, 1175, 1388, 1652
Tsp45I GTSAC 2 cut(s) 134, 1345
TspRI CASTG 3 cut(s) 615, 637, 1603
Tth111I GACNNNGTC 1 cut(s) 671
Vha464I CTTAAG 1 cut(s) 410
VpaK11BI GGWCC 1 cut(s) 59
XapI RAATTY 4 cut(s) 113, 289, 1107, 1159
XbaI TCTAGA 2 cut(s) 512, 664
XceI RCATGY 5 cut(s) 187, 191, 420, 2026, 2077
XmiI GTMKAC 1 cut(s) 1006
XmnI GAANNNNTTC 2 cut(s) 964, 1077
Zsp2I ATGCAT 2 cut(s) 189, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.