Rw5G026180

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000157
Physical Location & Seq
Reverse (-)
37773668 .. 37776584
2917 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G026180.1

Sequence Viewer

Length: 1857 bp
ATGTCTGCCCCACATGCACAACATGTACCACCTTCCCAGAATCAATTAACCACAGCTAGCCGCGATTCAGCGACTGGGAAAGACAACCAATCCGCACACACCGCCATCGACATTTCAGCTGATCATTCGGCTCAACCTAACAGACCTTCGTCTTATTTACTAGAACGTACAAACAGAGAAGAATACCTCAAGACATGTGTTGCCCTCTATAAGTATGCACTAAAAGGGGATTGGGAAGCGGCGGAACGAATCTTGAGAAAGGATACTATACTTCTGAGAGCAAGCATATCTAGAGGATATGAAACTGTCCTTCACGTTGCAGCAGGAACAAGCCATATTCACTTTGTGGAGAAACTGGTCAGCATGATGGAAGTAGAAGACTTGGCACTGCAGGACATAAATGGAAACACTGCCTTGTGCATTGCTGCTTCTGCTGGATCTCTAGACATTGTCAAGATTTTGATACGAAATAACACGTCTTTGCTAACAATTAGAGGTGGTAAGGATATGGCACCGGCCTATATGGCTGCTGCGTTAGGACAGTCTGAAGTGGCATGTTACCTGTACCGCGAAAGTAGTAAAGAGATGTTGAAGAAAACCGACCAAGAAAACTTGTTTTTTTCTTGCATCAACAATTGTCTGTACGATTTGGCCTTTCAGTTGCTAGATGCTGATAAAACATTAGCGAAGGCACGCACTAGTAATAAAACGGCCTTGCATATCCTGGCTCGAAGATCTTCAGCATTTGGTAGCAGCCAAAGTCCACCAATGTGGACTAGACTCATCAACTCATTCCTCCCAGGTTTGAAGTTCGCATGCGAAGGAAAGTTGAGAGAAGCTAATGGAGCCCTTCAACTAGTCCGCCTCCTCTGGGAAGAAATCTTGAAAGATGAGCATGATGACGTGATGAGGCTGATCAAATATCCTTCAAATTTATTATTTGACGCAGCGGAATTAGGGAATTATGAGTTCCTGGCAACGCTTGTGAACTCTTATCCTGAGTTAGTATGGGAAACTGATGAAAAAAATAGAACCATAATCCATGTTGCAGTTCTGCGTCGTCACGAAAGTATCTTCAATATAGTGCATGAAATAGGCTCAATCAAAGATGTCATCGTGACATATGAAGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAATTGAATCTCGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAAATCGTCCAACCTCAATACATCGAGATGGAAAACAACAACGAAAAAACTCCTCAAGAATTGTTTACTGAAGAGCATACGGCATTAATGCATCAAGGAGAAAAATGGATGAAGGACACTGCAACTTCATGCATGCTCGTTGCGACTATTATCGCAACCGTTGTGTTTTCAGCTACATTTAGCATACCGGGCGGCACTGATGATCATACTGGAAAGCCAAATCTTTTGAAACAGAAAGCCTTCCTACACTTTACCATAGCAGACGAAGTAGCACTCTTTTCCTCTTCAACTGCAATGTTGATGTTCTTGTTCATCCTTACCTCGCGGTATGCAGAAAATGATTTCCGCAAGTCCTTACCCTTGAAGTTGATGGTAGGGCTCGCTTGCCTCTTCATATCTATAGCATCGATGATGATGGCTTTCAGTACGGCCTTCTATCTATCTTGTCAATATGAATCAAGATGGGTTTCAAATTTTACATTTTTATTTGGATTTATCCCAGTTGCTTTGTTTGCGTTTATGCAATTCCCTCTCATGTCCGACATGTCCTCATCTATACTTTGCTCAAGTCTACTATTTCAGCCTTGGAAACGCATGCTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

618

Amino Acids

69.54

Weight (kDa)

6.08

Isoelectric Point (pI)

46.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 76 - 158 4.6e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 104 - 191 1.2e-09 Ankyrin repeats (3 copies)
PGG PF13962 451 - 564 2.3e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 511
AccI GTMKAC 1 cut(s) 1822
AccII CGCG 3 cut(s) 63, 570, 1576
AclWI GGATC 1 cut(s) 445
AcsI RAATTY 2 cut(s) 931, 1723
AcuI CTGAAG 3 cut(s) 567, 723, 1341
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 5 cut(s) 27, 169, 566, 644, 1678
AfiI CCNNNNNNNGG 1 cut(s) 871
AflIII ACRYGT 4 cut(s) 22, 194, 474, 1794
AhlI ACTAGT 2 cut(s) 698, 856
AjiI CACGTC 2 cut(s) 477, 904
AjnI CCWGG 3 cut(s) 723, 799, 972
AleI CACNNNNGTG 1 cut(s) 769
AluBI AGCT 5 cut(s) 56, 119, 839, 1208, 1424
AluI AGCT 5 cut(s) 56, 119, 839, 1208, 1424
AlwI GGATC 1 cut(s) 445
AlwNI CAGNNNCTG 1 cut(s) 74
AoxI GGCC 4 cut(s) 516, 651, 711, 1680
ApeKI GCWGC 7 cut(s) 320, 425, 527, 530, 753, 947, 1160
ApoI RAATTY 2 cut(s) 931, 1723
ArsI GACNNNNNNTTYG 2 cut(s) 1242, 1274
AseI ATTAAT 1 cut(s) 1337
Asp700I GAANNNNTTC 2 cut(s) 736, 1490
AsuC2I CCSGG 1 cut(s) 1440
AsuNHI GCTAGC 1 cut(s) 56
BaeI ACNNNNGTAYC 2 cut(s) 1054, 1087
BanI GGYRCC 1 cut(s) 511
BanII GRGCYC 2 cut(s) 850, 1632
BauI CACGAG 1 cut(s) 1193
BbsI GAAGAC 1 cut(s) 384
BbvI GCAGC 7 cut(s) 332, 412, 514, 517, 765, 959, 1147
BccI CCATC 6 cut(s) 113, 361, 1273, 1615, 1660, 1707
BceAI ACGGC 3 cut(s) 726, 1347, 1695
BciT130I CCWGG 3 cut(s) 725, 801, 974
BciVI GTATCC 1 cut(s) 256
BclI TGATCA 4 cut(s) 121, 915, 1132, 1453
BcnI CCSGG 1 cut(s) 1440
BcuI ACTAGT 2 cut(s) 698, 856
BfaI CTAG 8 cut(s) 57, 161, 291, 443, 665, 699, 777, 857
BfmI CTRYAG 2 cut(s) 389, 1650
BfuI GTATCC 1 cut(s) 256
BglI GCCNNNNNGGC 1 cut(s) 524
BglII AGATCT 1 cut(s) 734
Bme1390I CCNGG 4 cut(s) 725, 801, 974, 1440
BmgBI CACGTC 2 cut(s) 477, 904
BmiI GGNNCC 2 cut(s) 513, 847
BmrFI CCNGG 4 cut(s) 725, 801, 974, 1440
BmrI ACTGGG 2 cut(s) 84, 1745
BmsI GCATC 5 cut(s) 636, 658, 1228, 1351, 1664
BmtI GCTAGC 1 cut(s) 60
BmuI ACTGGG 2 cut(s) 84, 1745
BoxI GACNNNNGTC 1 cut(s) 148
BpiI GAAGAC 1 cut(s) 384
BpuEI CTTGAG 4 cut(s) 173, 274, 1290, 1801
BpuMI CCSGG 1 cut(s) 1440
Bsa29I ATCGAT 1 cut(s) 1658
BsaJI CCNNGG 2 cut(s) 799, 1835
Bsc4I CCNNNNNNNGG 1 cut(s) 871
Bse118I RCCGGY 1 cut(s) 514
Bse1I ACTGG 4 cut(s) 79, 360, 1465, 1751
Bse3DI GCAATG 2 cut(s) 420, 1551
BseBI CCWGG 3 cut(s) 725, 801, 974
BseCI ATCGAT 1 cut(s) 1658
BseDI CCNNGG 2 cut(s) 799, 1835
BseGI GGATG 2 cut(s) 1365, 1563
BseLI CCNNNNNNNGG 1 cut(s) 871
BseMI GCAATG 2 cut(s) 420, 1551
BseMII CTCAG 2 cut(s) 266, 990
BseNI ACTGG 4 cut(s) 79, 360, 1465, 1751
BseRI GAGGAG 2 cut(s) 857, 1293
BseXI GCAGC 7 cut(s) 332, 412, 514, 517, 765, 959, 1147
Bsh1236I CGCG 3 cut(s) 63, 570, 1576
BshFI GGCC 4 cut(s) 518, 653, 713, 1682
BshNI GGYRCC 1 cut(s) 511
BshVI ATCGAT 1 cut(s) 1658
BsiSI CCGG 2 cut(s) 515, 1439
BslI CCNNNNNNNGG 1 cut(s) 871
BsnI GGCC 4 cut(s) 518, 653, 713, 1682
Bsp1286I GDGCHC 2 cut(s) 850, 1632
Bsp143I GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
BspANI GGCC 4 cut(s) 518, 653, 713, 1682
BspCNI CTCAG 2 cut(s) 267, 991
BspDI ATCGAT 1 cut(s) 1658
BspFNI CGCG 3 cut(s) 63, 570, 1576
BspLI GGNNCC 2 cut(s) 513, 847
BspMAI CTGCAG 1 cut(s) 393
BspOI GCTAGC 1 cut(s) 60
BspPI GGATC 1 cut(s) 445
BspQI GCTCTTC 2 cut(s) 1215, 1317
BspT107I GGYRCC 1 cut(s) 511
BsrDI GCAATG 2 cut(s) 420, 1551
BsrFI RCCGGY 1 cut(s) 514
BsrI ACTGG 4 cut(s) 79, 360, 1465, 1751
BssAI RCCGGY 1 cut(s) 514
BssECI CCNNGG 2 cut(s) 799, 1835
BssMI GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
BssSI CACGAG 1 cut(s) 1193
BssT1I CCWWGG 1 cut(s) 1835
Bst2BI CACGAG 1 cut(s) 1193
Bst2UI CCWGG 3 cut(s) 725, 801, 974
Bst4CI ACNGT 3 cut(s) 307, 543, 1411
Bst6I CTCTTC 4 cut(s) 1215, 1317, 1540, 1646
BstC8I GCNNGC 8 cut(s) 58, 283, 694, 817, 1385, 1632, 1636, 1847
BstDEI CTNAG 2 cut(s) 275, 999
BstF5I GGATG 2 cut(s) 1365, 1563
BstFNI CGCG 3 cut(s) 63, 570, 1576
BstKTI GATC 6 cut(s) 124, 440, 737, 918, 1135, 1456
BstMBI GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
BstMWI GCNNNNNNNGC 8 cut(s) 14, 101, 431, 524, 845, 1169, 1440, 1763
BstNI CCWGG 3 cut(s) 725, 801, 974
BstNSI RCATGY 8 cut(s) 17, 26, 198, 558, 819, 1387, 1798, 1849
BstPAI GACNNNNGTC 1 cut(s) 148
BstSCI CCNGG 4 cut(s) 723, 799, 972, 1438
BstSFI CTRYAG 2 cut(s) 389, 1650
BstUI CGCG 3 cut(s) 63, 570, 1576
BstV1I GCAGC 7 cut(s) 332, 412, 514, 517, 765, 959, 1147
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 2 cut(s) 437, 734
BstXI CCANNNNNNTGG 1 cut(s) 771
BstYI RGATCY 2 cut(s) 437, 734
Bsu15I ATCGAT 1 cut(s) 1658
BsuI GTATCC 1 cut(s) 256
BsuRI GGCC 4 cut(s) 518, 653, 713, 1682
BsuTUI ATCGAT 1 cut(s) 1658
BtrI CACGTC 2 cut(s) 477, 904
BtsCI GGATG 2 cut(s) 1365, 1563
BtsI GCAGTG 3 cut(s) 386, 408, 1368
BtsIMutI CAGTG 4 cut(s) 386, 408, 1368, 1446
Cac8I GCNNGC 8 cut(s) 58, 283, 694, 817, 1385, 1632, 1636, 1847
CaiI CAGNNNCTG 1 cut(s) 74
Cfr10I RCCGGY 1 cut(s) 514
ClaI ATCGAT 1 cut(s) 1658
CseI GACGC 2 cut(s) 953, 1046
Csp6I GTAC 5 cut(s) 26, 168, 565, 643, 1677
CviQI GTAC 5 cut(s) 26, 168, 565, 643, 1677
DdeI CTNAG 2 cut(s) 275, 999
DpnI GATC 6 cut(s) 123, 439, 736, 917, 1134, 1455
DpnII GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
DraIII CACNNNGTG 1 cut(s) 346
Eam1104I CTCTTC 4 cut(s) 1215, 1317, 1540, 1646
EarI CTCTTC 4 cut(s) 1215, 1317, 1540, 1646
EciI GGCGGA 2 cut(s) 257, 851
Eco130I CCWWGG 1 cut(s) 1835
Eco24I GRGCYC 2 cut(s) 850, 1632
Eco57I CTGAAG 3 cut(s) 567, 723, 1341
EcoRII CCWGG 3 cut(s) 723, 799, 972
EcoT14I CCWWGG 1 cut(s) 1835
EcoT22I ATGCAT 3 cut(s) 1221, 1344, 1385
EcoT38I GRGCYC 2 cut(s) 850, 1632
ErhI CCWWGG 1 cut(s) 1835
FauNDI CATATG 2 cut(s) 1123, 1155
FbaI TGATCA 4 cut(s) 121, 915, 1132, 1453
FblI GTMKAC 1 cut(s) 1822
FokI GGATG 2 cut(s) 1372, 1550
FriOI GRGCYC 2 cut(s) 850, 1632
FspBI CTAG 8 cut(s) 57, 161, 291, 443, 665, 699, 777, 857
HaeIII GGCC 4 cut(s) 518, 653, 713, 1682
HapII CCGG 2 cut(s) 515, 1439
HgaI GACGC 2 cut(s) 953, 1046
HinfI GANTC 6 cut(s) 40, 65, 249, 780, 1189, 1706
HpaII CCGG 2 cut(s) 515, 1439
Hpy166II GTNNAC 5 cut(s) 764, 774, 988, 1317, 1823
Hpy188I TCNGA 3 cut(s) 276, 547, 1792
Hpy8I GTNNAC 5 cut(s) 764, 774, 988, 1317, 1823
Hpy99I CGWCG 1 cut(s) 1062
HpyCH4III ACNGT 3 cut(s) 307, 543, 1411
HpyCH4IV ACGT 4 cut(s) 166, 315, 476, 903
HpyF10VI GCNNNNNNNGC 8 cut(s) 14, 101, 431, 524, 845, 1169, 1440, 1763
HpyF3I CTNAG 2 cut(s) 275, 999
HpySE526I ACGT 4 cut(s) 166, 315, 476, 903
Ksp22I TGATCA 4 cut(s) 121, 915, 1132, 1453
Kzo9I GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
LguI GCTCTTC 2 cut(s) 1215, 1317
LmnI GCTCC 1 cut(s) 845
Lsp1109I GCAGC 7 cut(s) 332, 412, 514, 517, 765, 959, 1147
LweI GCATC 5 cut(s) 636, 658, 1228, 1351, 1664
MaeI CTAG 8 cut(s) 57, 161, 291, 443, 665, 699, 777, 857
MaeII ACGT 4 cut(s) 166, 315, 476, 903
MaeIII GTNAC 4 cut(s) 557, 1061, 1117, 1139
MalI GATC 6 cut(s) 123, 439, 736, 917, 1134, 1455
MboI GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
MfeI CAATTG 2 cut(s) 634, 1184
MflI RGATCY 2 cut(s) 437, 734
MhlI GDGCHC 2 cut(s) 850, 1632
MlyI GAGTC 1 cut(s) 774
MmeI TCCRAC 2 cut(s) 1285, 1815
Mph1103I ATGCAT 3 cut(s) 1221, 1344, 1385
MroXI GAANNNNTTC 2 cut(s) 736, 1490
MseI TTAA 2 cut(s) 47, 1337
MslI CAYNNNNRTG 2 cut(s) 769, 1277
MspA1I CMGCKG 2 cut(s) 119, 950
MspI CCGG 2 cut(s) 515, 1439
MspR9I CCNGG 4 cut(s) 725, 801, 974, 1440
MunI CAATTG 2 cut(s) 634, 1184
MvaI CCWGG 3 cut(s) 725, 801, 974
MvnI CGCG 3 cut(s) 63, 570, 1576
MwoI GCNNNNNNNGC 8 cut(s) 14, 101, 431, 524, 845, 1169, 1440, 1763
NciI CCSGG 1 cut(s) 1440
NdeI CATATG 2 cut(s) 1123, 1155
NdeII GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
NheI GCTAGC 1 cut(s) 56
NlaIV GGNNCC 2 cut(s) 513, 847
NmuCI GTSAC 2 cut(s) 1061, 1117
NsiI ATGCAT 3 cut(s) 1221, 1344, 1385
NspI RCATGY 8 cut(s) 17, 26, 198, 558, 819, 1387, 1798, 1849
OliI CACNNNNGTG 1 cut(s) 769
PaeI GCATGC 3 cut(s) 819, 1387, 1849
PciI ACATGT 3 cut(s) 22, 194, 1794
PciSI GCTCTTC 2 cut(s) 1215, 1317
PcsI WCGNNNNNNNCGW 1 cut(s) 1200
PdmI GAANNNNTTC 2 cut(s) 736, 1490
PfeI GAWTC 5 cut(s) 40, 65, 249, 1189, 1706
PflFI GACNNNGTC 1 cut(s) 449
PleI GAGTC 1 cut(s) 774
PpsI GAGTC 1 cut(s) 774
PscI ACATGT 3 cut(s) 22, 194, 1794
PshAI GACNNNNGTC 1 cut(s) 148
PshBI ATTAAT 1 cut(s) 1337
Psp6I CCWGG 3 cut(s) 723, 799, 972
PspGI CCWGG 3 cut(s) 723, 799, 972
PspN4I GGNNCC 2 cut(s) 513, 847
PstI CTGCAG 1 cut(s) 393
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 2 cut(s) 437, 734
PsyI GACNNNGTC 1 cut(s) 449
PvuII CAGCTG 1 cut(s) 119
RsaI GTAC 5 cut(s) 27, 169, 566, 644, 1678
RsaNI GTAC 5 cut(s) 26, 168, 565, 643, 1677
RseI CAYNNNNRTG 2 cut(s) 769, 1277
SapI GCTCTTC 2 cut(s) 1215, 1317
SaqAI TTAA 2 cut(s) 47, 1337
Sau3AI GATC 6 cut(s) 121, 437, 734, 915, 1132, 1453
SchI GAGTC 1 cut(s) 774
ScrFI CCNGG 4 cut(s) 725, 801, 974, 1440
SduI GDGCHC 2 cut(s) 850, 1632
SfaNI GCATC 5 cut(s) 636, 658, 1228, 1351, 1664
SfcI CTRYAG 2 cut(s) 389, 1650
SmiMI CAYNNNNRTG 2 cut(s) 769, 1277
SmlI CTYRAG 4 cut(s) 188, 253, 1305, 1816
SmoI CTYRAG 4 cut(s) 188, 253, 1305, 1816
SpeI ACTAGT 2 cut(s) 698, 856
SphI GCATGC 3 cut(s) 819, 1387, 1849
SspMI CTAG 8 cut(s) 57, 161, 291, 443, 665, 699, 777, 857
StyD4I CCNGG 4 cut(s) 723, 799, 972, 1438
StyI CCWWGG 1 cut(s) 1835
TaaI ACNGT 3 cut(s) 307, 543, 1411
TaiI ACGT 4 cut(s) 169, 318, 479, 906
TaqI TCGA 5 cut(s) 108, 730, 1222, 1275, 1658
TauI GCSGC 3 cut(s) 63, 242, 1446
TfiI GAWTC 5 cut(s) 40, 65, 249, 1189, 1706
Tru1I TTAA 2 cut(s) 47, 1337
Tru9I TTAA 2 cut(s) 47, 1337
TscAI CASTG 4 cut(s) 393, 415, 1375, 1453
TseFI GTSAC 2 cut(s) 1061, 1117
TseI GCWGC 7 cut(s) 320, 425, 527, 530, 753, 947, 1160
Tsp45I GTSAC 2 cut(s) 1061, 1117
TspDTI ATGAA 9 cut(s) 315, 1035, 1104, 1140, 1368, 1376, 1552, 1633, 1719
TspRI CASTG 4 cut(s) 393, 415, 1375, 1453
Tth111I GACNNNGTC 1 cut(s) 449
VspI ATTAAT 1 cut(s) 1337
XapI RAATTY 2 cut(s) 931, 1723
XbaI TCTAGA 2 cut(s) 290, 442
XceI RCATGY 8 cut(s) 17, 26, 198, 558, 819, 1387, 1798, 1849
XmiI GTMKAC 1 cut(s) 1822
XmnI GAANNNNTTC 2 cut(s) 736, 1490
XspI CTAG 8 cut(s) 57, 161, 291, 443, 665, 699, 777, 857
Zsp2I ATGCAT 3 cut(s) 1221, 1344, 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.