RchiOBHm_Chr5g0045281

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000157
Physical Location & Seq
Reverse (-)
41232044 .. 41235073
3030 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32339

Sequence Viewer

Length: 1713 bp
ATGATCATAATTAAACCCCATACAGGAGAAGAATACCTTAAGACATGTGTTGCCCTCTATAAGTATGCACTAAAGGGCGATTGGGAAGCTGCGGAACGAATCTTGAAAAAGGATACGAAACTTCTGAGAGCAAGCATATCTAGAGGATATGAAACAGTCCTTCACGTTGCAGCAGGGGCAAGACGTATTCATTTTGTGGAGAAACTGATCAGCATGATGAACGTAGAGGATTTGGCACTGCAGGACGTAAATGGAAACACTGCCTTGTGTATTGCCGCTGCGGCTGGATCTCTAGACATTGTCCAGATTTTGATACAAAAGAATAAGTCTTTGCTATCGATTCGAGGCGGTAAAGATATGACACCAGCCTACATGGCTGTTGTGTTGGGACAGTCAGAAATGGCATGGCACCTGTACGCTGAAAGTAACACGATGTTGGAGAAAACAGACCGCGAAAACTTGTTTTTTTCTTGCATCAACAATTGTTTGTATGATTTGGCCTTACCGTTGCTAAATGATGATAGAACATTAGCGACTGCACGTACTAAATCGCAGAAATATAAAACAGCCTTGCATATATTGGCTAGAAGGCCTTCAGCATTTGGTGGCAGCCAAAGTCCAGGAATGTGGAGTAGACTTACTAACTCATTCCTCCCAAGTTTGAAGTTTGCTTGCAAAAGAAAGTTAAAACAAGCTAATGAAGCCCTTCAACTAGTCCAACGTCTTTGGGAAGAAATTTTAAAAGATGAGCACGAAGACGTGATGAGGTTGATCAAATATCCTTCAAATTTATTATTTGACGCAGCAGAATTAGGGAATTATGAGTTTCTGGCGGCACTTATGAGCTCTTATCCTGAGTTGGTATGGGAAACTGATGAAAAAAATCGAACCATTATCCATGTCGCAGTTCTGCATCGTCATGCAAGTATCTTTAATCTAGTGCATGAAATAGGCTCGATCAAAGATGTCATAGTGACATATGAGGATGATCAGGGTAACAACATTGTGCATATGGCTGCAAAATTAGCACCTCAAAATCAGTTGAATCTAGTGTCAGGCGTAGCTCTTCAAATGCATCGAGAGTTGGTATGGTTTGAGGAAGTCAAAAAAATTGTTCAACCTCAGTATATAGAGATGGAAAACCAACAAGGAAAAACACCTCAAGAATTATTCACTCAGGAGCATAGGGCGCTAATGCGTCAAGGAGAATCATGGATGAAAGACACTGCAACTTCATGCTTGCTCGTTGCAACTATTATTGCAACTGTTGTGTTTTCAGCTGCATTTAGCATACCAGGTGGCACAGATGATCATACCGGAAAGCCCAACTTCTTAAAAGAGAAAATGTTTTTATACTTTACCATAGCCGATGGACTAGCACTCTTTTCCTCTTCAACTGCAATGCTAATGTTCTTGTTCATCCTAACCTCGCGGTACGCAGAAAACGATTTTCTCAAATCCTTACCATTGAAGTTGATGATAGGACTCACTTCCCTGTTCATCTCTATAGCATCCATGATGATGGCTTTCAGCACCGCCTTCTATTTGTCTTGTCAATATGAATCAAGATGGGTTTCAGATTTTACATTTTTATTTGCACTTGTCCCAGTTGCTTTGTTTGCGTTTATGCAATTCCCTCTCGTGTCCGACATGTCCTCTTCTATATTTTGCTCAAGTTTGTTATTTCAGCCGTGGAAACACATGCTCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

570

Amino Acids

64.55

Weight (kDa)

6.74

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 23 - 108 4.4e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 54 - 141 1.1e-09 Ankyrin repeats (3 copies)
PGG PF13962 404 - 516 1.8e-25 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 408
AccI GTMKAC 1 cut(s) 634
AccII CGCG 2 cut(s) 453, 1432
AciI CCGC 8 cut(s) 92, 276, 281, 348, 451, 833, 1432, 1536
AclWI GGATC 1 cut(s) 295
AcsI RAATTY 2 cut(s) 735, 787
AcuI CTGAAG 1 cut(s) 579
AfaI GTAC 3 cut(s) 416, 544, 1436
AfiI CCNNNNNNNGG 1 cut(s) 23
AflII CTTAAG 1 cut(s) 38
AflIII ACRYGT 2 cut(s) 44, 1650
AgsI TTSAA 9 cut(s) 106, 664, 710, 786, 1045, 1070, 1118, 1395, 1471
AhlI ACTAGT 1 cut(s) 712
AjiI CACGTC 1 cut(s) 760
AjnI CCWGG 2 cut(s) 619, 1294
AluBI AGCT 5 cut(s) 89, 695, 846, 1064, 1280
AluI AGCT 5 cut(s) 89, 695, 846, 1064, 1280
Alw21I GWGCWC 2 cut(s) 753, 848
AlwI GGATC 1 cut(s) 295
AoxI GGCC 2 cut(s) 498, 590
ApeKI GCWGC 7 cut(s) 89, 170, 278, 609, 803, 1016, 1280
ApoI RAATTY 2 cut(s) 735, 787
Asp700I GAANNNNTTC 2 cut(s) 592, 705
AspLEI GCGC 1 cut(s) 1192
BanI GGYRCC 1 cut(s) 408
BanII GRGCYC 1 cut(s) 848
BauI CACGAG 1 cut(s) 1640
BbsI GAAGAC 1 cut(s) 762
Bbv12I GWGCWC 2 cut(s) 753, 848
BbvI GCAGC 7 cut(s) 76, 182, 265, 621, 815, 1003, 1267
BccI CCATC 4 cut(s) 1129, 1364, 1516, 1563
BceAI ACGGC 1 cut(s) 1675
BciT130I CCWGG 2 cut(s) 621, 1296
BciVI GTATCC 1 cut(s) 106
BclI TGATCA 5 cut(s) 3, 207, 771, 988, 1309
BcuI ACTAGT 1 cut(s) 712
BfaI CTAG 8 cut(s) 141, 293, 585, 713, 938, 1049, 1376, 1711
BfmI CTRYAG 2 cut(s) 239, 1506
BfoI RGCGCY 1 cut(s) 1193
BfrI CTTAAG 1 cut(s) 38
BfuI GTATCC 1 cut(s) 106
BglI GCCNNNNNGGC 2 cut(s) 281, 374
Bme1390I CCNGG 2 cut(s) 621, 1296
BmgBI CACGTC 1 cut(s) 760
BmiI GGNNCC 1 cut(s) 410
BmrFI CCNGG 2 cut(s) 621, 1296
BmrI ACTGGG 1 cut(s) 1601
BmsI GCATC 4 cut(s) 483, 922, 1084, 1520
BmuI ACTGGG 1 cut(s) 1601
BpiI GAAGAC 1 cut(s) 762
BpuEI CTTGAG 2 cut(s) 1146, 1657
Bsa29I ATCGAT 1 cut(s) 338
BsaAI YACGTR 1 cut(s) 542
BsaJI CCNNGG 1 cut(s) 1691
BsaWI WCCGGW 1 cut(s) 1316
Bsc4I CCNNNNNNNGG 1 cut(s) 23
Bse1I ACTGG 1 cut(s) 1607
Bse3DI GCAATG 1 cut(s) 1407
BseBI CCWGG 2 cut(s) 621, 1296
BseCI ATCGAT 1 cut(s) 338
BseDI CCNNGG 1 cut(s) 1691
BseGI GGATG 4 cut(s) 991, 1221, 1419, 1511
BseLI CCNNNNNNNGG 1 cut(s) 23
BseMI GCAATG 1 cut(s) 1407
BseMII CTCAG 4 cut(s) 116, 846, 1136, 1190
BseNI ACTGG 1 cut(s) 1607
BseXI GCAGC 7 cut(s) 76, 182, 265, 621, 815, 1003, 1267
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 2 cut(s) 453, 1432
BshFI GGCC 2 cut(s) 500, 592
BshNI GGYRCC 1 cut(s) 408
BshVI ATCGAT 1 cut(s) 338
BsiHKAI GWGCWC 2 cut(s) 753, 848
BsiSI CCGG 1 cut(s) 1317
BslFI GGGAC 2 cut(s) 402, 1589
BslI CCNNNNNNNGG 1 cut(s) 23
BsmFI GGGAC 2 cut(s) 402, 1589
BsnI GGCC 2 cut(s) 500, 592
Bsp1286I GDGCHC 2 cut(s) 753, 848
Bsp143I GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
BspACI CCGC 8 cut(s) 92, 276, 281, 348, 451, 833, 1432, 1536
BspANI GGCC 2 cut(s) 500, 592
BspCNI CTCAG 4 cut(s) 117, 847, 1135, 1189
BspDI ATCGAT 1 cut(s) 338
BspFNI CGCG 2 cut(s) 453, 1432
BspLI GGNNCC 1 cut(s) 410
BspMAI CTGCAG 1 cut(s) 243
BspPI GGATC 1 cut(s) 295
BspQI GCTCTTC 1 cut(s) 1071
BspT107I GGYRCC 1 cut(s) 408
BspTI CTTAAG 1 cut(s) 38
BsrDI GCAATG 1 cut(s) 1407
BsrI ACTGG 1 cut(s) 1607
BssECI CCNNGG 1 cut(s) 1691
BssMI GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
BssSI CACGAG 1 cut(s) 1640
Bst2BI CACGAG 1 cut(s) 1640
Bst2UI CCWGG 2 cut(s) 621, 1296
Bst4CI ACNGT 4 cut(s) 157, 393, 507, 1267
Bst6I CTCTTC 3 cut(s) 1071, 1396, 1663
BstAFI CTTAAG 1 cut(s) 38
BstBAI YACGTR 1 cut(s) 542
BstC8I GCNNGC 3 cut(s) 133, 673, 1241
BstDEI CTNAG 4 cut(s) 125, 855, 1122, 1176
BstDSI CCRYGG 1 cut(s) 1691
BstF5I GGATG 4 cut(s) 991, 1221, 1419, 1511
BstFNI CGCG 2 cut(s) 453, 1432
BstH2I RGCGCY 1 cut(s) 1193
BstHHI GCGC 1 cut(s) 1192
BstKTI GATC 7 cut(s) 6, 210, 290, 774, 960, 991, 1312
BstMBI GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
BstMWI GCNNNNNNNGC 7 cut(s) 176, 281, 374, 701, 1025, 1189, 1619
BstNI CCWGG 2 cut(s) 621, 1296
BstNSI RCATGY 3 cut(s) 48, 1654, 1705
BstSCI CCNGG 2 cut(s) 619, 1294
BstSFI CTRYAG 2 cut(s) 239, 1506
BstUI CGCG 2 cut(s) 453, 1432
BstV1I GCAGC 7 cut(s) 76, 182, 265, 621, 815, 1003, 1267
BstV2I GAAGAC 1 cut(s) 762
BstX2I RGATCY 1 cut(s) 287
BstXI CCANNNNNNTGG 2 cut(s) 627, 1522
BstYI RGATCY 1 cut(s) 287
Bsu15I ATCGAT 1 cut(s) 338
BsuI GTATCC 1 cut(s) 106
BsuRI GGCC 2 cut(s) 500, 592
BsuTUI ATCGAT 1 cut(s) 338
BtgI CCRYGG 1 cut(s) 1691
BtrI CACGTC 1 cut(s) 760
BtsCI GGATG 4 cut(s) 991, 1221, 1419, 1511
BtsI GCAGTG 3 cut(s) 236, 258, 1224
BtsIMutI CAGTG 3 cut(s) 236, 258, 1224
Cac8I GCNNGC 3 cut(s) 133, 673, 1241
CfoI GCGC 1 cut(s) 1192
ClaI ATCGAT 1 cut(s) 338
CseI GACGC 2 cut(s) 809, 1187
CsiI ACCWGGT 1 cut(s) 1294
Csp6I GTAC 3 cut(s) 415, 543, 1435
CviQI GTAC 3 cut(s) 415, 543, 1435
DdeI CTNAG 4 cut(s) 125, 855, 1122, 1176
DpnI GATC 7 cut(s) 5, 209, 289, 773, 959, 990, 1311
DpnII GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
DraI TTTAAA 1 cut(s) 741
Eam1104I CTCTTC 3 cut(s) 1071, 1396, 1663
EarI CTCTTC 3 cut(s) 1071, 1396, 1663
Ecl136II GAGCTC 1 cut(s) 846
Eco147I AGGCCT 1 cut(s) 592
Eco24I GRGCYC 1 cut(s) 848
Eco53kI GAGCTC 1 cut(s) 846
Eco57I CTGAAG 1 cut(s) 579
EcoICRI GAGCTC 1 cut(s) 846
EcoRII CCWGG 2 cut(s) 619, 1294
EcoT22I ATGCAT 1 cut(s) 1077
EcoT38I GRGCYC 1 cut(s) 848
FalI AAGNNNNNCTT 4 cut(s) 21, 53, 1313, 1345
FaqI GGGAC 2 cut(s) 402, 1589
FauNDI CATATG 2 cut(s) 979, 1011
FbaI TGATCA 5 cut(s) 3, 207, 771, 988, 1309
FblI GTMKAC 1 cut(s) 634
FokI GGATG 4 cut(s) 998, 1228, 1406, 1498
FriOI GRGCYC 1 cut(s) 848
FspBI CTAG 8 cut(s) 141, 293, 585, 713, 938, 1049, 1376, 1711
GlaI GCGC 1 cut(s) 1191
HaeII RGCGCY 1 cut(s) 1193
HaeIII GGCC 2 cut(s) 500, 592
HapII CCGG 1 cut(s) 1317
HgaI GACGC 2 cut(s) 809, 1187
HhaI GCGC 1 cut(s) 1192
Hin6I GCGC 1 cut(s) 1190
HinP1I GCGC 1 cut(s) 1190
HinfI GANTC 6 cut(s) 99, 340, 1045, 1208, 1485, 1562
HpaII CCGG 1 cut(s) 1317
Hpy166II GTNNAC 1 cut(s) 635
Hpy188I TCNGA 4 cut(s) 126, 397, 1579, 1648
Hpy188III TCNNGA 9 cut(s) 103, 141, 293, 304, 854, 1079, 1163, 1178, 1566
Hpy8I GTNNAC 1 cut(s) 635
HpyAV CCTTC 6 cut(s) 170, 582, 603, 716, 792, 1549
HpyCH4III ACNGT 4 cut(s) 157, 393, 507, 1267
HpyCH4IV ACGT 7 cut(s) 165, 184, 222, 246, 541, 721, 759
HpyF10VI GCNNNNNNNGC 7 cut(s) 176, 281, 374, 701, 1025, 1189, 1619
HpyF3I CTNAG 4 cut(s) 125, 855, 1122, 1176
HpySE526I ACGT 7 cut(s) 165, 184, 222, 246, 541, 721, 759
HspAI GCGC 1 cut(s) 1190
Ksp22I TGATCA 5 cut(s) 3, 207, 771, 988, 1309
Kzo9I GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
LguI GCTCTTC 1 cut(s) 1071
LmnI GCTCC 1 cut(s) 1180
Lsp1109I GCAGC 7 cut(s) 76, 182, 265, 621, 815, 1003, 1267
LweI GCATC 4 cut(s) 483, 922, 1084, 1520
MabI ACCWGGT 1 cut(s) 1294
MaeI CTAG 8 cut(s) 141, 293, 585, 713, 938, 1049, 1376, 1711
MaeII ACGT 7 cut(s) 165, 184, 222, 246, 541, 721, 759
MaeIII GTNAC 3 cut(s) 425, 973, 995
MalI GATC 7 cut(s) 5, 209, 289, 773, 959, 990, 1311
MboI GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
MboII GAAGA 6 cut(s) 41, 743, 767, 1058, 1383, 1650
MfeI CAATTG 1 cut(s) 481
MflI RGATCY 1 cut(s) 287
MhlI GDGCHC 2 cut(s) 753, 848
MlyI GAGTC 1 cut(s) 1479
MmeI TCCRAC 3 cut(s) 417, 742, 1671
Mph1103I ATGCAT 1 cut(s) 1077
MroXI GAANNNNTTC 2 cut(s) 592, 705
MseI TTAA 6 cut(s) 12, 39, 686, 740, 933, 1334
MslI CAYNNNNRTG 2 cut(s) 918, 1520
MspA1I CMGCKG 2 cut(s) 278, 1280
MspCI CTTAAG 1 cut(s) 38
MspI CCGG 1 cut(s) 1317
MspR9I CCNGG 2 cut(s) 621, 1296
MunI CAATTG 1 cut(s) 481
MvaI CCWGG 2 cut(s) 621, 1296
MvnI CGCG 2 cut(s) 453, 1432
MwoI GCNNNNNNNGC 7 cut(s) 176, 281, 374, 701, 1025, 1189, 1619
NdeI CATATG 2 cut(s) 979, 1011
NdeII GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
NlaIV GGNNCC 1 cut(s) 410
NmuCI GTSAC 1 cut(s) 973
NsiI ATGCAT 1 cut(s) 1077
NspI RCATGY 3 cut(s) 48, 1654, 1705
PceI AGGCCT 1 cut(s) 592
PciI ACATGT 2 cut(s) 44, 1650
PciSI GCTCTTC 1 cut(s) 1071
PcsI WCGNNNNNNNCGW 1 cut(s) 1443
PdmI GAANNNNTTC 2 cut(s) 592, 705
PfeI GAWTC 5 cut(s) 99, 340, 1045, 1208, 1562
PflFI GACNNNGTC 1 cut(s) 299
PfoI TCCNGGA 1 cut(s) 619
PleI GAGTC 1 cut(s) 1479
PpsI GAGTC 1 cut(s) 1479
Ppu21I YACGTR 1 cut(s) 542
PscI ACATGT 2 cut(s) 44, 1650
Psp124BI GAGCTC 1 cut(s) 848
Psp6I CCWGG 2 cut(s) 619, 1294
PspGI CCWGG 2 cut(s) 619, 1294
PspN4I GGNNCC 1 cut(s) 410
PstI CTGCAG 1 cut(s) 243
PsuI RGATCY 1 cut(s) 287
PsyI GACNNNGTC 1 cut(s) 299
PvuII CAGCTG 1 cut(s) 1280
RsaI GTAC 3 cut(s) 416, 544, 1436
RsaNI GTAC 3 cut(s) 415, 543, 1435
RseI CAYNNNNRTG 2 cut(s) 918, 1520
SacI GAGCTC 1 cut(s) 848
SapI GCTCTTC 1 cut(s) 1071
SaqAI TTAA 6 cut(s) 12, 39, 686, 740, 933, 1334
Sau3AI GATC 7 cut(s) 3, 207, 287, 771, 957, 988, 1309
SchI GAGTC 1 cut(s) 1479
ScrFI CCNGG 2 cut(s) 621, 1296
SduI GDGCHC 2 cut(s) 753, 848
SexAI ACCWGGT 1 cut(s) 1294
SfaNI GCATC 4 cut(s) 483, 922, 1084, 1520
SfcI CTRYAG 2 cut(s) 239, 1506
SmiMI CAYNNNNRTG 2 cut(s) 918, 1520
SmlI CTYRAG 3 cut(s) 38, 1161, 1672
SmoI CTYRAG 3 cut(s) 38, 1161, 1672
SpeI ACTAGT 1 cut(s) 712
SseBI AGGCCT 1 cut(s) 592
SsiI CCGC 8 cut(s) 92, 276, 281, 348, 451, 833, 1432, 1536
SspMI CTAG 8 cut(s) 141, 293, 585, 713, 938, 1049, 1376, 1711
SstI GAGCTC 1 cut(s) 848
StuI AGGCCT 1 cut(s) 592
StyD4I CCNGG 2 cut(s) 619, 1294
TaaI ACNGT 4 cut(s) 157, 393, 507, 1267
TaiI ACGT 7 cut(s) 168, 187, 225, 249, 544, 724, 762
TaqI TCGA 5 cut(s) 338, 343, 886, 956, 1078
TauI GCSGC 3 cut(s) 278, 284, 836
TfiI GAWTC 5 cut(s) 99, 340, 1045, 1208, 1562
Tru1I TTAA 6 cut(s) 12, 39, 686, 740, 933, 1334
Tru9I TTAA 6 cut(s) 12, 39, 686, 740, 933, 1334
TscAI CASTG 3 cut(s) 243, 265, 1231
TseFI GTSAC 1 cut(s) 973
TseI GCWGC 7 cut(s) 89, 170, 278, 609, 803, 1016, 1280
Tsp45I GTSAC 1 cut(s) 973
TspRI CASTG 3 cut(s) 243, 265, 1231
Tth111I GACNNNGTC 1 cut(s) 299
Vha464I CTTAAG 1 cut(s) 38
XapI RAATTY 2 cut(s) 735, 787
XbaI TCTAGA 2 cut(s) 140, 292
XceI RCATGY 3 cut(s) 48, 1654, 1705
XmiI GTMKAC 1 cut(s) 634
XmnI GAANNNNTTC 2 cut(s) 592, 705
XspI CTAG 8 cut(s) 141, 293, 585, 713, 938, 1049, 1376, 1711
Zsp2I ATGCAT 1 cut(s) 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.