Rmu_sc0000594.1_g000032

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000594.1
OG0000157
Physical Location & Seq
Forward (+)
99832 .. 105225
5394 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000594.1_g000032.1.cds

Sequence Viewer

Length: 2124 bp
atgtctatccaacaagaacaacatgtatcaccttcccggattcaattaaccacagctagccgcaattcagcgactgggacagacaaccaatccgcagacattgccatcgacatttcagcagatcattcggctcaacctaacagaccttcttcttatttactggaacacaaaaacagagaagaatcccgtaagacacgtgttgccctctataagtatgcactaaaaggcgattgggaagccgctgaaccgatcttgaaacagaacagcaaactactgcaagcaagcatatctagaggatatgaaacagtccttcacgttgcagcaggaacaagccatattcactttgtggagaaactggtcggcatgatgaaagtagaagacttggcactgcaggatgaaaatggaaacactgccttatgcattgccgctgctgctggatctctagaaattgtccagattttgatagaaaagaacgagtctttgctaacaattagaggcggtaaagatatggcaccagcctacatggctgctgtgttaggacagtccggaatggcatggcacctgtaccacgtaagtaaaaagatgctggaggaaaccgaccaagaaaacttgttcttttcttgcatcaacaattgtttgtacgatttggcctctcagttgctagatgctaataaagcattagcgaaggcacgtacaagctcgcagaaaaataaaacggccttgcatatcctggctcgaaaaccttcagcatttggtggcagccaaagtccacgaatgtggactagactcattaactcatgtttcaagttcgcatacaaaagagagttgagagaagctgatggagcccttcaactagtccgctgcctctgggaagaagtcttgagagatgataaccatgatgacgtgatggagctgatcaactatccttcaaatttattatttgacgcagcagaattaggaaattatgagtttttggcagagcttctgagctcttatcctgagttagtatgggaaactgatgaaaaaaatcgaaccataatccatgtcgcagttctgcatcgtcatgcgagtatcttcaatctagtgcatgaaataggctcaatcaaagatgtcatcgtgacatatgtagataaggggggtaacaacattgtgcatatggctgcaaacttagcacctcaaaatcaattgaatctcgtgtcaggcgtagctcttcaaatgcatcgagagttagtatggtttgaggaagtcaaaaagatcgtccaaccacaatacaatgagatggaaaacgacgaaggaaaaacacctcaagaattatttactaaagagcatacggcgttaatgcgtcaaggagaaaaatggatgaaggacactgcaacttcatgcatgctcgttgcgactattatcgcaaccgttgtgttctcagctgcatttagcataccgggtggctctgatgatcatactggaaagccaaatcttttgaaacagaaagcctttctagactttaccatagctgacgaagtagcactcttttcctcttcaactgcaatgttgatgttcttgttcatccttacctcgcgctatgcagaaaatgatttccgcaagtccttacccttgaagttgatggtcaagggattctccgacgactacaccccacggtgctggcacacttgcgcacaagctcaaaagatacagtttgcacccatactggttttggagccaaacattttggcacgcccagtagatggtttctttgtgatcgcaaccattgggaaatcaagcgcaaacccttaccagaaggtttacgttaactacccaaaccacaagacctccagttacagaccgcactctagtgccgactgtcatggtcttttcgaagaacagcctaatgaggctggcggcgcggccaacactgcccaagtggccgcgagtgaggggaaaattgattcctttgtgcccattatcgccccggtgaatgcgagcattgaggagcggctcgccatctttcagcaaaataatgctgcatataatgggaggatggaaatggccctcgcggaagagcgccgaaggcttgatgaggtttcgatctcacagcgaaatcttgaagcaagttcgcgacaaacgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

707

Amino Acids

78.86

Weight (kDa)

5.97

Isoelectric Point (pI)

46.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1672
AccB1I GGYRCC 2 cut(s) 511, 558
AccB7I CCANNNNNTGG 1 cut(s) 1742
AccBSI CCGCTC 1 cut(s) 1990
AccII CGCG 5 cut(s) 1576, 1901, 1925, 2051, 2113
AccIII TCCGGA 1 cut(s) 545
AclWI GGATC 1 cut(s) 445
AcoI YGGCCR 2 cut(s) 1902, 1920
AcsI RAATTY 1 cut(s) 931
AcuI CTGAAG 1 cut(s) 729
AcvI CACGTG 1 cut(s) 197
AdeI CACNNNGTG 1 cut(s) 346
AfaI GTAC 3 cut(s) 566, 641, 694
AfiI CCNNNNNNNGG 1 cut(s) 1742
AflIII ACRYGT 3 cut(s) 22, 194, 196
AhlI ACTAGT 1 cut(s) 853
AjiI CACGTC 1 cut(s) 904
AjnI CCWGG 1 cut(s) 729
AleI CACNNNNGTG 2 cut(s) 775, 1848
Alw21I GWGCWC 1 cut(s) 992
AlwI GGATC 1 cut(s) 445
AlwNI CAGNNNCTG 1 cut(s) 74
Aor13HI TCCGGA 1 cut(s) 545
AoxI GGCC 5 cut(s) 648, 717, 1902, 1920, 2043
ApoI RAATTY 1 cut(s) 931
ArsI GACNNNNNNTTYG 2 cut(s) 1242, 1274
Asp700I GAANNNNTTC 1 cut(s) 742
AspLEI GCGC 5 cut(s) 1578, 1673, 1781, 1901, 2061
AspS9I GGNCC 1 cut(s) 2044
AsuC2I CCSGG 3 cut(s) 37, 1440, 1967
AsuHPI GGTGA 2 cut(s) 21, 1981
AsuII TTCGAA 1 cut(s) 1872
AsuNHI GCTAGC 1 cut(s) 56
BaeGI GKGCMC 1 cut(s) 1956
BanI GGYRCC 2 cut(s) 511, 558
BanII GRGCYC 2 cut(s) 847, 992
BauI CACGAG 1 cut(s) 1193
BbrPI CACGTG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 384
Bbv12I GWGCWC 1 cut(s) 992
BccI CCATC 8 cut(s) 113, 833, 901, 1273, 1615, 1736, 2006, 2029
BceAI ACGGC 2 cut(s) 732, 1347
BcgI CGANNNNNNTGC 2 cut(s) 108, 142
BciT130I CCWGG 1 cut(s) 731
BclI TGATCA 2 cut(s) 915, 1453
BcnI CCSGG 3 cut(s) 37, 1440, 1967
BcuI ACTAGT 1 cut(s) 853
BfaI CTAG 9 cut(s) 57, 291, 443, 662, 783, 854, 1082, 1496, 1848
BfmI CTRYAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 2062
BglI GCCNNNNNGGC 2 cut(s) 524, 1919
Bme1390I CCNGG 4 cut(s) 37, 731, 1440, 1967
BmgBI CACGTC 1 cut(s) 904
BmgT120I GGNCC 1 cut(s) 2044
BmiI GGNNCC 4 cut(s) 513, 560, 844, 1716
BmrFI CCNGG 4 cut(s) 37, 731, 1440, 1967
BmrI ACTGGG 2 cut(s) 84, 1730
BmsI GCATC 5 cut(s) 573, 633, 655, 1066, 1228
BmtI GCTAGC 1 cut(s) 60
BmuI ACTGGG 2 cut(s) 84, 1730
BpiI GAAGAC 1 cut(s) 384
BpmI CTGGAG 2 cut(s) 608, 1813
Bpu14I TTCGAA 1 cut(s) 1872
BpuEI CTTGAG 2 cut(s) 901, 1290
BpuMI CCSGG 3 cut(s) 37, 1440, 1967
BsaAI YACGTR 3 cut(s) 197, 571, 692
BsaJI CCNNGG 2 cut(s) 1652, 1965
BsaWI WCCGGW 1 cut(s) 545
BsaXI ACNNNNNCTCC 2 cut(s) 1811, 1841
Bsc4I CCNNNNNNNGG 1 cut(s) 1742
Bse1I ACTGG 7 cut(s) 79, 165, 360, 1465, 1710, 1736, 1830
Bse3DI GCAATG 3 cut(s) 99, 420, 1551
BseAI TCCGGA 1 cut(s) 545
BseBI CCWGG 1 cut(s) 731
BseDI CCNNGG 2 cut(s) 1652, 1965
BseGI GGATG 4 cut(s) 400, 1365, 1563, 2040
BseLI CCNNNNNNNGG 1 cut(s) 1742
BseMI GCAATG 3 cut(s) 99, 420, 1551
BseMII CTCAG 4 cut(s) 668, 977, 990, 1434
BseNI ACTGG 7 cut(s) 79, 165, 360, 1465, 1710, 1736, 1830
BseRI GAGGAG 1 cut(s) 2000
BseSI GKGCMC 1 cut(s) 1956
Bsh1236I CGCG 5 cut(s) 1576, 1901, 1925, 2051, 2113
BshFI GGCC 5 cut(s) 650, 719, 1904, 1922, 2045
BshNI GGYRCC 2 cut(s) 511, 558
BsiHKAI GWGCWC 1 cut(s) 992
BsiSI CCGG 4 cut(s) 37, 546, 1439, 1967
BslFI GGGAC 1 cut(s) 91
BslI CCNNNNNNNGG 1 cut(s) 1742
BsmFI GGGAC 1 cut(s) 91
BsmI GAATGC 1 cut(s) 1978
BsnI GGCC 5 cut(s) 650, 719, 1904, 1922, 2045
Bsp119I TTCGAA 1 cut(s) 1872
Bsp1286I GDGCHC 3 cut(s) 847, 992, 1956
Bsp13I TCCGGA 1 cut(s) 545
Bsp143I GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
Bsp68I TCGCGA 1 cut(s) 2113
BspANI GGCC 5 cut(s) 650, 719, 1904, 1922, 2045
BspCNI CTCAG 4 cut(s) 667, 978, 991, 1433
BspEI TCCGGA 1 cut(s) 545
BspFNI CGCG 5 cut(s) 1576, 1901, 1925, 2051, 2113
BspLI GGNNCC 4 cut(s) 513, 560, 844, 1716
BspMAI CTGCAG 1 cut(s) 393
BspOI GCTAGC 1 cut(s) 60
BspPI GGATC 1 cut(s) 445
BspQI GCTCTTC 2 cut(s) 1215, 2049
BspT104I TTCGAA 1 cut(s) 1872
BspT107I GGYRCC 2 cut(s) 511, 558
BsrBI CCGCTC 1 cut(s) 1990
BsrDI GCAATG 3 cut(s) 99, 420, 1551
BsrI ACTGG 7 cut(s) 79, 165, 360, 1465, 1710, 1736, 1830
BssECI CCNNGG 2 cut(s) 1652, 1965
BssMI GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
BssSI CACGAG 1 cut(s) 1193
Bst2BI CACGAG 1 cut(s) 1193
Bst2UI CCWGG 1 cut(s) 731
Bst4CI ACNGT 6 cut(s) 307, 543, 1411, 1656, 1692, 1859
Bst6I CTCTTC 3 cut(s) 1215, 1540, 2049
BstAPI GCANNNNNTGC 1 cut(s) 101
BstBAI YACGTR 3 cut(s) 197, 571, 692
BstBI TTCGAA 1 cut(s) 1872
BstDEI CTNAG 5 cut(s) 654, 986, 999, 1168, 1420
BstDSI CCRYGG 1 cut(s) 1652
BstF5I GGATG 4 cut(s) 400, 1365, 1563, 2040
BstFNI CGCG 5 cut(s) 1576, 1901, 1925, 2051, 2113
BstH2I RGCGCY 1 cut(s) 2062
BstHHI GCGC 5 cut(s) 1578, 1673, 1781, 1901, 2061
BstKTI GATC 8 cut(s) 124, 252, 440, 918, 1257, 1456, 1758, 2085
BstMBI GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
BstNI CCWGG 1 cut(s) 731
BstNSI RCATGY 2 cut(s) 26, 1387
BstSCI CCNGG 4 cut(s) 35, 729, 1438, 1965
BstSFI CTRYAG 1 cut(s) 389
BstSLI GKGCMC 1 cut(s) 1956
BstUI CGCG 5 cut(s) 1576, 1901, 1925, 2051, 2113
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 1 cut(s) 437
BstXI CCANNNNNNTGG 2 cut(s) 777, 1659
BstYI RGATCY 1 cut(s) 437
BsuRI GGCC 5 cut(s) 650, 719, 1904, 1922, 2045
BtgI CCRYGG 1 cut(s) 1652
BtrI CACGTC 1 cut(s) 904
BtsCI GGATG 4 cut(s) 400, 1365, 1563, 2040
BtsI GCAGTG 4 cut(s) 386, 408, 1368, 1908
BtsIMutI CAGTG 4 cut(s) 386, 408, 1368, 1908
BtuMI TCGCGA 1 cut(s) 2113
CaiI CAGNNNCTG 1 cut(s) 74
CfoI GCGC 5 cut(s) 1578, 1673, 1781, 1901, 2061
Cfr13I GGNCC 1 cut(s) 2044
CseI GACGC 2 cut(s) 953, 1331
Csp6I GTAC 3 cut(s) 565, 640, 693
CviQI GTAC 3 cut(s) 565, 640, 693
DdeI CTNAG 5 cut(s) 654, 986, 999, 1168, 1420
DpnI GATC 8 cut(s) 123, 251, 439, 917, 1256, 1455, 1757, 2084
DpnII GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
DraIII CACNNNGTG 1 cut(s) 346
EaeI YGGCCR 2 cut(s) 1902, 1920
Eam1104I CTCTTC 3 cut(s) 1215, 1540, 2049
EarI CTCTTC 3 cut(s) 1215, 1540, 2049
Ecl136II GAGCTC 1 cut(s) 990
Eco24I GRGCYC 2 cut(s) 847, 992
Eco53kI GAGCTC 1 cut(s) 990
Eco57I CTGAAG 1 cut(s) 729
Eco72I CACGTG 1 cut(s) 197
EcoICRI GAGCTC 1 cut(s) 990
EcoRII CCWGG 1 cut(s) 729
EcoT22I ATGCAT 3 cut(s) 422, 1221, 1385
EcoT38I GRGCYC 2 cut(s) 847, 992
FaqI GGGAC 1 cut(s) 91
FauNDI CATATG 2 cut(s) 1123, 1155
FbaI TGATCA 2 cut(s) 915, 1453
FokI GGATG 4 cut(s) 407, 1372, 1550, 2047
FriOI GRGCYC 2 cut(s) 847, 992
FspBI CTAG 9 cut(s) 57, 291, 443, 662, 783, 854, 1082, 1496, 1848
FspI TGCGCA 1 cut(s) 1672
GlaI GCGC 5 cut(s) 1577, 1672, 1780, 1900, 2060
GsuI CTGGAG 2 cut(s) 608, 1813
HaeII RGCGCY 1 cut(s) 2062
HaeIII GGCC 5 cut(s) 650, 719, 1904, 1922, 2045
HapII CCGG 4 cut(s) 37, 546, 1439, 1967
HgaI GACGC 2 cut(s) 953, 1331
HhaI GCGC 5 cut(s) 1578, 1673, 1781, 1901, 2061
Hin6I GCGC 5 cut(s) 1576, 1671, 1779, 1899, 2059
HinP1I GCGC 5 cut(s) 1576, 1671, 1779, 1899, 2059
HincII GTYRAC 1 cut(s) 1807
HindII GTYRAC 1 cut(s) 1807
HinfI GANTC 7 cut(s) 40, 182, 476, 786, 1189, 1632, 1943
HpaI GTTAAC 1 cut(s) 1807
HpaII CCGG 4 cut(s) 37, 546, 1439, 1967
HphI GGTGA 2 cut(s) 21, 1981
Hpy166II GTNNAC 4 cut(s) 770, 780, 1801, 1807
Hpy188I TCNGA 3 cut(s) 987, 1450, 1639
Hpy8I GTNNAC 4 cut(s) 770, 780, 1801, 1807
Hpy99I CGWCG 2 cut(s) 1292, 1643
HpyCH4III ACNGT 6 cut(s) 307, 543, 1411, 1656, 1692, 1859
HpyCH4IV ACGT 7 cut(s) 196, 315, 570, 691, 903, 1803, 2120
HpyF3I CTNAG 5 cut(s) 654, 986, 999, 1168, 1420
HpySE526I ACGT 7 cut(s) 196, 315, 570, 691, 903, 1803, 2120
HspAI GCGC 5 cut(s) 1576, 1671, 1779, 1899, 2059
Kpn2I TCCGGA 1 cut(s) 545
Ksp22I TGATCA 2 cut(s) 915, 1453
KspAI GTTAAC 1 cut(s) 1807
Kzo9I GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
LguI GCTCTTC 2 cut(s) 1215, 2049
LmnI GCTCC 4 cut(s) 842, 910, 1714, 1987
LweI GCATC 5 cut(s) 573, 633, 655, 1066, 1228
MaeI CTAG 9 cut(s) 57, 291, 443, 662, 783, 854, 1082, 1496, 1848
MaeII ACGT 7 cut(s) 196, 315, 570, 691, 903, 1803, 2120
MaeIII GTNAC 3 cut(s) 1117, 1139, 1832
MalI GATC 8 cut(s) 123, 251, 439, 917, 1256, 1455, 1757, 2084
MbiI CCGCTC 1 cut(s) 1990
MboI GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
MboII GAAGA 9 cut(s) 141, 191, 389, 884, 1066, 1202, 1527, 1886, 2066
MfeI CAATTG 2 cut(s) 631, 1184
MflI RGATCY 1 cut(s) 437
MhlI GDGCHC 3 cut(s) 847, 992, 1956
MlyI GAGTC 2 cut(s) 485, 780
MmeI TCCRAC 3 cut(s) 34, 1285, 1662
Mph1103I ATGCAT 3 cut(s) 422, 1221, 1385
MroI TCCGGA 1 cut(s) 545
MroXI GAANNNNTTC 1 cut(s) 742
MseI TTAA 4 cut(s) 47, 792, 1337, 1806
MslI CAYNNNNRTG 3 cut(s) 775, 1062, 1848
MspA1I CMGCKG 4 cut(s) 242, 428, 861, 1424
MspI CCGG 4 cut(s) 37, 546, 1439, 1967
MspR9I CCNGG 4 cut(s) 37, 731, 1440, 1967
MunI CAATTG 2 cut(s) 631, 1184
Mva1269I GAATGC 1 cut(s) 1978
MvaI CCWGG 1 cut(s) 731
MvnI CGCG 5 cut(s) 1576, 1901, 1925, 2051, 2113
NciI CCSGG 3 cut(s) 37, 1440, 1967
NdeI CATATG 2 cut(s) 1123, 1155
NdeII GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
NheI GCTAGC 1 cut(s) 56
NlaIV GGNNCC 4 cut(s) 513, 560, 844, 1716
NmuCI GTSAC 1 cut(s) 1117
NruI TCGCGA 1 cut(s) 2113
NsbI TGCGCA 1 cut(s) 1672
NsiI ATGCAT 3 cut(s) 422, 1221, 1385
NspI RCATGY 2 cut(s) 26, 1387
NspV TTCGAA 1 cut(s) 1872
OliI CACNNNNGTG 2 cut(s) 775, 1848
PaeI GCATGC 1 cut(s) 1387
PciI ACATGT 1 cut(s) 22
PciSI GCTCTTC 2 cut(s) 1215, 2049
PcsI WCGNNNNNNNCGW 2 cut(s) 1200, 2117
PctI GAATGC 1 cut(s) 1978
PdmI GAANNNNTTC 1 cut(s) 742
PfeI GAWTC 5 cut(s) 40, 182, 1189, 1632, 1943
PflMI CCANNNNNTGG 1 cut(s) 1742
PfoI TCCNGGA 1 cut(s) 35
PleI GAGTC 2 cut(s) 484, 780
PmaCI CACGTG 1 cut(s) 197
PmlI CACGTG 1 cut(s) 197
PpsI GAGTC 2 cut(s) 484, 780
Ppu21I YACGTR 3 cut(s) 197, 571, 692
PscI ACATGT 1 cut(s) 22
Psp124BI GAGCTC 1 cut(s) 992
Psp6I CCWGG 1 cut(s) 729
PspCI CACGTG 1 cut(s) 197
PspGI CCWGG 1 cut(s) 729
PspN4I GGNNCC 4 cut(s) 513, 560, 844, 1716
PspPI GGNCC 1 cut(s) 2044
PstI CTGCAG 1 cut(s) 393
PstNI CAGNNNCTG 1 cut(s) 74
PsuI RGATCY 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 1424
RruI TCGCGA 1 cut(s) 2113
RsaI GTAC 3 cut(s) 566, 641, 694
RsaNI GTAC 3 cut(s) 565, 640, 693
RseI CAYNNNNRTG 3 cut(s) 775, 1062, 1848
SacI GAGCTC 1 cut(s) 992
SapI GCTCTTC 2 cut(s) 1215, 2049
SaqAI TTAA 4 cut(s) 47, 792, 1337, 1806
Sau3AI GATC 8 cut(s) 121, 249, 437, 915, 1254, 1453, 1755, 2082
Sau96I GGNCC 1 cut(s) 2044
SchI GAGTC 2 cut(s) 485, 780
ScrFI CCNGG 4 cut(s) 37, 731, 1440, 1967
SduI GDGCHC 3 cut(s) 847, 992, 1956
SfaNI GCATC 5 cut(s) 573, 633, 655, 1066, 1228
SfcI CTRYAG 1 cut(s) 389
SfuI TTCGAA 1 cut(s) 1872
SmiMI CAYNNNNRTG 3 cut(s) 775, 1062, 1848
SmlI CTYRAG 2 cut(s) 880, 1305
SmoI CTYRAG 2 cut(s) 880, 1305
SpeI ACTAGT 1 cut(s) 853
SphI GCATGC 1 cut(s) 1387
SspMI CTAG 9 cut(s) 57, 291, 443, 662, 783, 854, 1082, 1496, 1848
SstI GAGCTC 1 cut(s) 992
StyD4I CCNGG 4 cut(s) 35, 729, 1438, 1965
TaaI ACNGT 6 cut(s) 307, 543, 1411, 1656, 1692, 1859
TaiI ACGT 7 cut(s) 199, 318, 573, 694, 906, 1806, 2123
TaqI TCGA 6 cut(s) 108, 736, 1030, 1222, 1872, 2081
TauI GCSGC 7 cut(s) 63, 242, 428, 1899, 1904, 1925, 1993
TfiI GAWTC 5 cut(s) 40, 182, 1189, 1632, 1943
Tru1I TTAA 4 cut(s) 47, 792, 1337, 1806
Tru9I TTAA 4 cut(s) 47, 792, 1337, 1806
TscAI CASTG 4 cut(s) 393, 415, 1375, 1915
TseFI GTSAC 1 cut(s) 1117
Tsp45I GTSAC 1 cut(s) 1117
TspDTI ATGAA 8 cut(s) 315, 383, 411, 1035, 1104, 1368, 1376, 1552
TspRI CASTG 4 cut(s) 393, 415, 1375, 1915
Van91I CCANNNNNTGG 1 cut(s) 1742
XapI RAATTY 1 cut(s) 931
XbaI TCTAGA 3 cut(s) 290, 442, 1495
XceI RCATGY 2 cut(s) 26, 1387
XcmI CCANNNNNNNNNTGG 1 cut(s) 1708
XmnI GAANNNNTTC 1 cut(s) 742
XspI CTAG 9 cut(s) 57, 291, 443, 662, 783, 854, 1082, 1496, 1848
Zsp2I ATGCAT 3 cut(s) 422, 1221, 1385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.