Rmu_sc0001047.1_g000003

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001047.1
OG0000157
Physical Location & Seq
Reverse (-)
14466 .. 17007
2542 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001047.1_g000003.1.cds

Sequence Viewer

Length: 1755 bp
atgtctatcccacaagaacaacatgtaccacctattgggatccaattaaccaccaccatcgacattttggcagatttacctaaaccgaagacaccttcgcttcatctactagaacacaaaaatagagagctataccttaagatatgtgtgcctctatataaatatgcactaaaaggtgattgggaagctgctgaacaaatcttgggaaaagatcgaacacttttgagtgctagcatatcaagaggatgggacactgtcctacatattgctgctggagcaagacatattcacttcgtggagaaactggtcgaaatcatggacaaagaagacttggcactccaagacataaacggaaacactgccctatgcattgctgctgcggcaggatctgtagagattgtccaaattttgataaaacataatgattctttgttgacaattcgaggaggtcaaaaaatggcgccaccctatatggctgctgcgttaggacagtcagaaatggcatggtacctgtaccctaaaagtaaaaggatgttggagaaaagtgacctcgaaaacttgttcttttcgtgcatcaacaatggtttgtatgatttagccttacagttgctagatactaatacagcattagccaaggcacgcactgataggccaaaaaataaaacagccttgcatatcttggctcgaaggacttcagtattcgggacccaaagtccaggaatgtggggtagactcattaaatcatcacttcagctagtccaacgcctttgggaagaaattttgaaagatgagcatgatgacgtgatgaggctgatcaaatatccctcaaatttaatatttgatgcagcagaaatagggaattatgagttcttggcagtgcttatgagctcttaccctgagttagtatgggaaactgatgaaaaaaatcgaactataatccgtgtcgctgttctgcatcgtcatgcaaatatcttcaatctagtgcatgagataggctcaatcaaggatgtcatagtgacttttgaggatgatcaaggtaataatatagtgcatatggctgcaaaaatagcacctcaaaatcaattgaatctagtgtctggtgtagctcttcaactgcagcgagagttagtatggtttgaggaagtaaagaagattgtgcaacctcaatatatagagatggaaaacaagaaaggaaaaacacctcaagaattattcactaaggagcatcagacgttgatgcgtcaaggagaaaaatggatgaaggacactgcaacttcatgcttgctcgttgcgactattattgcaactgttgtattttcagctgcatttagtataccaggtggcacagatgatcatacaggaaagccaaactttttgaaagagaaagcgtttttatactttactatagctgatggagtggcacttttttcctcttcaactgcaatgctgatgttcttgttcatcctcacctcacggtatgcagaaaacgatttcctcatgtccttgcccttgaagttgatgattgggctcacttgcctcttcgtctcaatagcatctatgatgatggcttttagcactgccttctatttgtcttgtcaatatggatcaagatggattccagatcttacatttttctttgcaattgtccctattgctttatatgcatttatgcaatttcctcttgtgtctgatatgtcatcttcaacattttgttcaagtcttctatttcagccatggaaacatatgatatactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

584

Amino Acids

65.97

Weight (kDa)

6.48

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 507
AccB1I GGYRCC 2 cut(s) 460, 507
AccB7I CCANNNNNTGG 1 cut(s) 35
AccI GTMKAC 2 cut(s) 730, 1333
AciI CCGC 1 cut(s) 380
AclWI GGATC 4 cut(s) 34, 47, 394, 1612
AcsI RAATTY 3 cut(s) 405, 777, 829
AcuI CTGAAG 2 cut(s) 678, 734
AcyI GRCGYC 1 cut(s) 461
AdeI CACNNNGTG 1 cut(s) 295
AfaI GTAC 3 cut(s) 27, 509, 515
AfiI CCNNNNNNNGG 1 cut(s) 35
AflII CTTAAG 1 cut(s) 137
AflIII ACRYGT 1 cut(s) 22
AgsI TTSAA 9 cut(s) 784, 976, 1087, 1112, 1378, 1437, 1513, 1704, 1716
AhdI GACNNNNNGTC 1 cut(s) 711
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 2 cut(s) 715, 1336
AluBI AGCT 7 cut(s) 130, 188, 754, 888, 1106, 1322, 1409
AluI AGCT 7 cut(s) 130, 188, 754, 888, 1106, 1322, 1409
Alw21I GWGCWC 1 cut(s) 890
Alw26I GTCTC 1 cut(s) 1549
AlwI GGATC 4 cut(s) 34, 47, 394, 1612
AlwNI CAGNNNCTG 1 cut(s) 389
AoxI GGCC 1 cut(s) 650
ApoI RAATTY 3 cut(s) 405, 777, 829
Asp700I GAANNNNTTC 1 cut(s) 691
Asp718I GGTACC 1 cut(s) 507
AspLEI GCGC 1 cut(s) 463
AspS9I GGNCC 1 cut(s) 705
AsuHPI GGTGA 2 cut(s) 188, 1459
AsuNHI GCTAGC 1 cut(s) 230
AvaII GGWCC 1 cut(s) 705
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 2 cut(s) 460, 507
BanII GRGCYC 2 cut(s) 890, 1530
BbsI GAAGAC 3 cut(s) 95, 333, 1712
Bbv12I GWGCWC 1 cut(s) 890
BccI CCATC 6 cut(s) 65, 240, 1171, 1406, 1558, 1605
BciT130I CCWGG 2 cut(s) 717, 1338
BclI TGATCA 3 cut(s) 813, 1030, 1351
BcoDI GTCTC 1 cut(s) 1549
BfaI CTAG 7 cut(s) 110, 231, 611, 755, 980, 1091, 1753
BfmI CTRYAG 3 cut(s) 390, 1115, 1404
BfoI RGCGCY 1 cut(s) 464
BfrI CTTAAG 1 cut(s) 137
BglII AGATCT 1 cut(s) 1621
Bme1390I CCNGG 2 cut(s) 717, 1338
Bme18I GGWCC 1 cut(s) 705
BmeRI GACNNNNNGTC 1 cut(s) 711
BmgBI CACGTC 1 cut(s) 802
BmgT120I GGNCC 1 cut(s) 705
BmiI GGNNCC 5 cut(s) 41, 462, 509, 706, 707
BmrFI CCNGG 2 cut(s) 717, 1338
BmsI GCATC 6 cut(s) 582, 832, 964, 1227, 1234, 1562
BmtI GCTAGC 1 cut(s) 234
BpiI GAAGAC 3 cut(s) 95, 333, 1712
BplI GAGNNNNNCTC 2 cut(s) 980, 1012
BpmI CTGGAG 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 1188
BsaHI GRCGYC 1 cut(s) 461
BsaJI CCNNGG 2 cut(s) 633, 1733
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse1I ACTGG 1 cut(s) 309
Bse3DI GCAATG 2 cut(s) 369, 1449
BseBI CCWGG 2 cut(s) 717, 1338
BseDI CCNNGG 2 cut(s) 633, 1733
BseGI GGATG 6 cut(s) 251, 537, 1012, 1033, 1263, 1461
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMI GCAATG 2 cut(s) 369, 1449
BseMII CTCAG 1 cut(s) 888
BseNI ACTGG 1 cut(s) 309
BseRI GAGGAG 1 cut(s) 459
BshFI GGCC 1 cut(s) 652
BshNI GGYRCC 2 cut(s) 460, 507
BsiHKAI GWGCWC 1 cut(s) 890
BslFI GGGAC 3 cut(s) 263, 718, 1631
BslI CCNNNNNNNGG 1 cut(s) 35
BsmAI GTCTC 1 cut(s) 1549
BsmBI CGTCTC 1 cut(s) 1549
BsmFI GGGAC 3 cut(s) 263, 718, 1631
BsnI GGCC 1 cut(s) 652
Bsp1286I GDGCHC 2 cut(s) 890, 1530
Bsp143I GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
Bsp19I CCATGG 1 cut(s) 1733
BspACI CCGC 1 cut(s) 380
BspANI GGCC 1 cut(s) 652
BspCNI CTCAG 1 cut(s) 889
BspLI GGNNCC 5 cut(s) 41, 462, 509, 706, 707
BspMAI CTGCAG 1 cut(s) 1119
BspOI GCTAGC 1 cut(s) 234
BspPI GGATC 4 cut(s) 34, 47, 394, 1612
BspQI GCTCTTC 1 cut(s) 1113
BspT107I GGYRCC 2 cut(s) 460, 507
BspTI CTTAAG 1 cut(s) 137
BsrDI GCAATG 2 cut(s) 369, 1449
BsrI ACTGG 1 cut(s) 309
BssECI CCNNGG 2 cut(s) 633, 1733
BssMI GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
BssNAI GTATAC 1 cut(s) 1334
BssNI GRCGYC 1 cut(s) 461
BssT1I CCWWGG 2 cut(s) 633, 1733
Bst1107I GTATAC 1 cut(s) 1334
Bst2UI CCWGG 2 cut(s) 717, 1338
Bst4CI ACNGT 5 cut(s) 256, 492, 606, 1309, 1476
Bst6I CTCTTC 3 cut(s) 1113, 1438, 1544
BstACI GRCGYC 1 cut(s) 461
BstAFI CTTAAG 1 cut(s) 137
BstC8I GCNNGC 3 cut(s) 232, 640, 1283
BstDEI CTNAG 2 cut(s) 897, 1218
BstDSI CCRYGG 1 cut(s) 1733
BstF5I GGATG 6 cut(s) 251, 537, 1012, 1033, 1263, 1461
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 1 cut(s) 463
BstKTI GATC 8 cut(s) 42, 214, 389, 816, 1033, 1354, 1607, 1624
BstMAI GTCTC 1 cut(s) 1549
BstMBI GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
BstMWI GCNNNNNNNGC 4 cut(s) 275, 380, 1067, 1661
BstNI CCWGG 2 cut(s) 717, 1338
BstNSI RCATGY 1 cut(s) 26
BstSCI CCNGG 2 cut(s) 715, 1336
BstSFI CTRYAG 3 cut(s) 390, 1115, 1404
BstV2I GAAGAC 3 cut(s) 95, 333, 1712
BstX2I RGATCY 3 cut(s) 39, 386, 1621
BstXI CCANNNNNNTGG 1 cut(s) 723
BstYI RGATCY 3 cut(s) 39, 386, 1621
BstZ17I GTATAC 1 cut(s) 1334
BsuRI GGCC 1 cut(s) 652
BtgI CCRYGG 1 cut(s) 1733
BtrI CACGTC 1 cut(s) 802
BtsCI GGATG 6 cut(s) 251, 537, 1012, 1033, 1263, 1461
BtsI GCAGTG 4 cut(s) 357, 882, 1266, 1575
BtsIMutI CAGTG 6 cut(s) 252, 357, 642, 882, 1266, 1575
Cac8I GCNNGC 3 cut(s) 232, 640, 1283
CaiI CAGNNNCTG 1 cut(s) 389
CfoI GCGC 1 cut(s) 463
Cfr13I GGNCC 1 cut(s) 705
CseI GACGC 1 cut(s) 1229
CsiI ACCWGGT 1 cut(s) 1336
Csp6I GTAC 3 cut(s) 26, 508, 514
CviAII CATG 9 cut(s) 23, 316, 504, 794, 962, 986, 1278, 1498, 1734
CviQI GTAC 3 cut(s) 26, 508, 514
DdeI CTNAG 2 cut(s) 897, 1218
DinI GGCGCC 1 cut(s) 462
DpnI GATC 8 cut(s) 41, 213, 388, 815, 1032, 1353, 1606, 1623
DpnII GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
DraIII CACNNNGTG 1 cut(s) 295
DriI GACNNNNNGTC 1 cut(s) 711
Eam1104I CTCTTC 3 cut(s) 1113, 1438, 1544
Eam1105I GACNNNNNGTC 1 cut(s) 711
EarI CTCTTC 3 cut(s) 1113, 1438, 1544
Ecl136II GAGCTC 1 cut(s) 888
Eco130I CCWWGG 2 cut(s) 633, 1733
Eco24I GRGCYC 2 cut(s) 890, 1530
Eco47I GGWCC 1 cut(s) 705
Eco53kI GAGCTC 1 cut(s) 888
Eco57I CTGAAG 2 cut(s) 678, 734
EcoICRI GAGCTC 1 cut(s) 888
EcoO109I RGGNCCY 1 cut(s) 705
EcoRII CCWGG 2 cut(s) 715, 1336
EcoT14I CCWWGG 2 cut(s) 633, 1733
EcoT22I ATGCAT 2 cut(s) 371, 1666
EcoT38I GRGCYC 2 cut(s) 890, 1530
EgeI GGCGCC 1 cut(s) 462
EheI GGCGCC 1 cut(s) 462
ErhI CCWWGG 2 cut(s) 633, 1733
Esp3I CGTCTC 1 cut(s) 1549
FaeI CATG 9 cut(s) 26, 319, 507, 797, 965, 989, 1281, 1501, 1737
FalI AAGNNNNNCTT 2 cut(s) 1355, 1387
FaqI GGGAC 3 cut(s) 263, 718, 1631
FatI CATG 9 cut(s) 22, 315, 503, 793, 961, 985, 1277, 1497, 1733
FauNDI CATATG 2 cut(s) 1053, 1743
FbaI TGATCA 3 cut(s) 813, 1030, 1351
FblI GTMKAC 2 cut(s) 730, 1333
FokI GGATG 6 cut(s) 258, 544, 1019, 1040, 1270, 1448
FriOI GRGCYC 2 cut(s) 890, 1530
FspBI CTAG 7 cut(s) 110, 231, 611, 755, 980, 1091, 1753
GlaI GCGC 1 cut(s) 462
GsuI CTGGAG 1 cut(s) 294
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 1 cut(s) 652
HgaI GACGC 1 cut(s) 1229
HhaI GCGC 1 cut(s) 463
Hin1I GRCGYC 1 cut(s) 461
Hin1II CATG 9 cut(s) 26, 319, 507, 797, 965, 989, 1281, 1501, 1737
Hin6I GCGC 1 cut(s) 461
HinP1I GCGC 1 cut(s) 461
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HinfI GANTC 4 cut(s) 425, 732, 1087, 1615
HphI GGTGA 2 cut(s) 188, 1459
Hpy166II GTNNAC 3 cut(s) 435, 731, 1334
Hpy188I TCNGA 3 cut(s) 496, 1230, 1690
Hpy188III TCNNGA 5 cut(s) 240, 703, 1205, 1608, 1619
Hpy8I GTNNAC 3 cut(s) 435, 731, 1334
HpyAV CCTTC 4 cut(s) 105, 681, 1255, 1591
HpyCH4III ACNGT 5 cut(s) 256, 492, 606, 1309, 1476
HpyCH4IV ACGT 2 cut(s) 801, 1232
HpyF10VI GCNNNNNNNGC 4 cut(s) 275, 380, 1067, 1661
HpyF3I CTNAG 2 cut(s) 897, 1218
HpySE526I ACGT 2 cut(s) 801, 1232
Hsp92I GRCGYC 1 cut(s) 461
Hsp92II CATG 9 cut(s) 26, 319, 507, 797, 965, 989, 1281, 1501, 1737
HspAI GCGC 1 cut(s) 461
KasI GGCGCC 1 cut(s) 460
KflI GGGWCCC 1 cut(s) 705
KpnI GGTACC 1 cut(s) 511
Ksp22I TGATCA 3 cut(s) 813, 1030, 1351
Kzo9I GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
LguI GCTCTTC 1 cut(s) 1113
LmnI GCTCC 2 cut(s) 275, 1222
LweI GCATC 6 cut(s) 582, 832, 964, 1227, 1234, 1562
MabI ACCWGGT 1 cut(s) 1336
MaeI CTAG 7 cut(s) 110, 231, 611, 755, 980, 1091, 1753
MaeII ACGT 2 cut(s) 801, 1232
MaeIII GTNAC 2 cut(s) 545, 1015
MalI GATC 8 cut(s) 41, 213, 388, 815, 1032, 1353, 1606, 1623
MboI GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
MfeI CAATTG 2 cut(s) 1082, 1641
MflI RGATCY 3 cut(s) 39, 386, 1621
MhlI GDGCHC 2 cut(s) 890, 1530
Mly113I GGCGCC 1 cut(s) 461
MlyI GAGTC 1 cut(s) 726
MmeI TCCRAC 2 cut(s) 516, 784
Mph1103I ATGCAT 2 cut(s) 371, 1666
MroXI GAANNNNTTC 1 cut(s) 691
MseI TTAA 4 cut(s) 47, 138, 738, 833
MslI CAYNNNNRTG 1 cut(s) 960
MspA1I CMGCKG 1 cut(s) 1322
MspCI CTTAAG 1 cut(s) 137
MspR9I CCNGG 2 cut(s) 717, 1338
MunI CAATTG 2 cut(s) 1082, 1641
MvaI CCWGG 2 cut(s) 717, 1338
MwoI GCNNNNNNNGC 4 cut(s) 275, 380, 1067, 1661
NarI GGCGCC 1 cut(s) 461
NcoI CCATGG 1 cut(s) 1733
NdeI CATATG 2 cut(s) 1053, 1743
NdeII GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
NheI GCTAGC 1 cut(s) 230
NlaIII CATG 9 cut(s) 26, 319, 507, 797, 965, 989, 1281, 1501, 1737
NlaIV GGNNCC 5 cut(s) 41, 462, 509, 706, 707
NmuCI GTSAC 2 cut(s) 545, 1015
NsiI ATGCAT 2 cut(s) 371, 1666
NspI RCATGY 1 cut(s) 26
PciI ACATGT 1 cut(s) 22
PciSI GCTCTTC 1 cut(s) 1113
PdmI GAANNNNTTC 1 cut(s) 691
PfeI GAWTC 3 cut(s) 425, 1087, 1615
PflFI GACNNNGTC 1 cut(s) 254
PflMI CCANNNNNTGG 1 cut(s) 35
PfoI TCCNGGA 1 cut(s) 715
PleI GAGTC 1 cut(s) 726
PluTI GGCGCC 1 cut(s) 464
PpsI GAGTC 1 cut(s) 726
PpuMI RGGWCCY 1 cut(s) 705
PscI ACATGT 1 cut(s) 22
Psp124BI GAGCTC 1 cut(s) 890
Psp5II RGGWCCY 1 cut(s) 705
Psp6I CCWGG 2 cut(s) 715, 1336
PspGI CCWGG 2 cut(s) 715, 1336
PspN4I GGNNCC 5 cut(s) 41, 462, 509, 706, 707
PspPI GGNCC 1 cut(s) 705
PspPPI RGGWCCY 1 cut(s) 705
PsrI GAACNNNNNNTAC 2 cut(s) 9, 41
PstI CTGCAG 1 cut(s) 1119
PstNI CAGNNNCTG 1 cut(s) 389
PsuI RGATCY 3 cut(s) 39, 386, 1621
PsyI GACNNNGTC 1 cut(s) 254
PvuII CAGCTG 1 cut(s) 1322
RsaI GTAC 3 cut(s) 27, 509, 515
RsaNI GTAC 3 cut(s) 26, 508, 514
RseI CAYNNNNRTG 1 cut(s) 960
SacI GAGCTC 1 cut(s) 890
SapI GCTCTTC 1 cut(s) 1113
SaqAI TTAA 4 cut(s) 47, 138, 738, 833
Sau3AI GATC 8 cut(s) 39, 211, 386, 813, 1030, 1351, 1604, 1621
Sau96I GGNCC 1 cut(s) 705
SchI GAGTC 1 cut(s) 726
ScrFI CCNGG 2 cut(s) 717, 1338
SduI GDGCHC 2 cut(s) 890, 1530
SexAI ACCWGGT 1 cut(s) 1336
SfaNI GCATC 6 cut(s) 582, 832, 964, 1227, 1234, 1562
SfcI CTRYAG 3 cut(s) 390, 1115, 1404
SfoI GGCGCC 1 cut(s) 462
SinI GGWCC 1 cut(s) 705
SmiMI CAYNNNNRTG 1 cut(s) 960
SmlI CTYRAG 2 cut(s) 137, 1203
SmoI CTYRAG 2 cut(s) 137, 1203
SsiI CCGC 1 cut(s) 380
SspDI GGCGCC 1 cut(s) 460
SspI AATATT 1 cut(s) 837
SspMI CTAG 7 cut(s) 110, 231, 611, 755, 980, 1091, 1753
SstI GAGCTC 1 cut(s) 890
StyD4I CCNGG 2 cut(s) 715, 1336
StyI CCWWGG 2 cut(s) 633, 1733
TaaI ACNGT 5 cut(s) 256, 492, 606, 1309, 1476
TaiI ACGT 2 cut(s) 804, 1235
TaqI TCGA 7 cut(s) 60, 214, 309, 442, 552, 685, 928
TauI GCSGC 1 cut(s) 383
TfiI GAWTC 3 cut(s) 425, 1087, 1615
Tru1I TTAA 4 cut(s) 47, 138, 738, 833
Tru9I TTAA 4 cut(s) 47, 138, 738, 833
TscAI CASTG 6 cut(s) 259, 364, 649, 882, 1273, 1582
TseFI GTSAC 2 cut(s) 545, 1015
Tsp45I GTSAC 2 cut(s) 545, 1015
TspDTI ATGAA 5 cut(s) 92, 933, 1266, 1274, 1450
TspGWI ACGGA 2 cut(s) 366, 929
TspRI CASTG 6 cut(s) 259, 364, 649, 882, 1273, 1582
Tth111I GACNNNGTC 1 cut(s) 254
Van91I CCANNNNNTGG 1 cut(s) 35
Vha464I CTTAAG 1 cut(s) 137
VpaK11BI GGWCC 1 cut(s) 705
XapI RAATTY 3 cut(s) 405, 777, 829
XceI RCATGY 1 cut(s) 26
XcmI CCANNNNNNNNNTGG 1 cut(s) 64
XmiI GTMKAC 2 cut(s) 730, 1333
XmnI GAANNNNTTC 1 cut(s) 691
XspI CTAG 7 cut(s) 110, 231, 611, 755, 980, 1091, 1753
Zsp2I ATGCAT 2 cut(s) 371, 1666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.