FvH4_3g25081

Ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000157
Physical Location & Seq
Reverse (-)
18127665 .. 18130318
2654 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g25081.t1

Sequence Viewer

Length: 1821 bp
ATGTCTATCCCACCAGCACACAATTCTGTACTGCCTGGAATTCAACTGATGGCCACCGGAAATGGAGATCCAATAGCAACTGCACATTTTGTCATCAACATTCCCTCGATACCTTCTCATCGTTTTTTGGATAACGACAATAGAGACGCATACCTTGATAAGTGCGTGCCACTCAATAAGTATGCACTAAAAGGCAATTGGGAAGCTGCTGAACGAATTTTGAAGAACGATCCAGAATTTTTGACTTCTAGCATAACAAGAGGAGGGGACACTGTCCTTCACATTGCAGCCGGAGCAAGACATGTTCACTTTGTGGAGAAACTGGTCGAAATGATGGATGAACAAGACTTGGCACTGGAAGACATGGAAGGAAATACGGCCTTCAGCATTGCTGCGGCAGCCGGAAGTATTGAAATTGCACAGATTATGATGAAGAAGAACAGGTATTTGCCAACCATTCGAGGTGGTGAAGGAATGACACCACTCTATATGGCTGCCTTGATGGGACAATCTGTAATGGCAGATTTCCTGTACTCTGCAACCAAGGAAATGTTGGAGGAAGCCGACCAGCAATCGTTGTTTTTTACCTGTATTGATAATGGTTTGTATGACCTAGCAACGAAGATGCTCATAAGTAACAAAGCATTAGCCAAGGCTCGTGATGTAAAACAGGAAACAGCTTTGCATATCTTGGCTAGAATGCCTTCAGAATTCACCAGCCAAAGTCCAGGAATGTGGAGTAGACTCATCAACTCATTTATCCCAGGTTGGAAGTTCTCATACTATAGAAACTTGAAACAAGTCGATGATGCCCTTCAACTAGTCGAATGCCTTTGGACAGAAATCTTGAGAAGTGATCATGATGATATGATGGGACTAATCAAACATCCTTCCAAATTATTGTTCGAAGCTACAGAATTAGGAAATTATGAGTTCCTGGCAGTGCTTATTAGGTCTTATCCTGATTTAATATGGCACCTTGATGACAAAAATCGGAGTATAATACATGTTGCTGTTTTGCATCGTCATGCAAGTATCTTCAATCTAGTGCATGAGATAGGCTCAATCAAGGATATCATAGTGACATTTACTGATGATGAGAGTAATAACATCTTACATATGGCTGCAAAATTAGCACCTCCAAATCAACTCAACCTTGTATCAGGAGCAGCGCTTCAAATGCAGCGAGAGTTGGTATGGTTTGAGGAAGTAAAAAAGACTGTACAACCTCCCTCTATAAGGATGAAAAACCAGAAAGGAAAAACACCACGGGAATTATTCACAAGTGAGCATGAAGAGTTGTTGCACAAAGGTGAAGCATGGATGAAGCACACTGCAAATTCTTGTATGATTGTTGCTGCTCTTATCGCTACTGTTGTGTTCTCGGCAGCATTTAGCGTACCTGGTGGGACATCTGATAATACAGGAGAGCCACACTTTCTAAAAGAGACCGCCTTCCTATTCTTTGCCATAGCAGATGGAGTAGCACTCGTTTCCTCTTCAACTTCAATACTGATGTTCTTGTTCATCCTCACATCACGTTATGCTGAAGGTGATTTCCTCAGATCATTGCCATTGAAGTTGATGATAGGACTCACATCACTTTTCATCTCAATAGCATCCATGATGGTAGCTTTTAGTACAACCTTCTATTTAGACTGTCACTATGGATTAGGATGGTTGCCGAATCTTATATTTGTATTTGCATTTGTCCCCGTGGCGTTATTTGCTTTTCTGCACTTTCCTCTCTTGTCTGATATGTTTTCTTCAACATATTGTTCAACTCTTTTATTTCAGCCATGGAAACATATGATCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

607

Amino Acids

67.85

Weight (kDa)

5.81

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 62 - 146 5.9e-08 Ankyrin repeats (3 copies)
PGG PF13962 440 - 552 6.2e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G54070 AT5G35830
fragaria_vesca FvH4_3g25070 FvH4_3g25080 FvH4_3g25081 FvH4_3g25081
malus_domestica MD03G1027500.v1.1 MD03G1146300.v1.1 MD03G1146800.v1.1 MD03G1146900.v1.1 MD03G1147100.v1.1 MD11G1165600.v1.1
prunus_persica Prupe.2G015800_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G015900_v2.0.a1 Prupe.2G016300_v2.0.a1 Prupe.2G016500_v2.0.a1 Prupe.6G131100_v2.0.a1 Prupe.6G131400_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131500_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131600_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1 Prupe.6G131800_v2.0.a1
pyrus_communis pycom03g10090 pycom03g10110 pycom11g13740 pycom11g13770
rosa_chinensis RchiOBHm_Chr1g0316371 RchiOBHm_Chr1g0316381 RchiOBHm_Chr1g0316401 RchiOBHm_Chr1g0316411 RchiOBHm_Chr1g0316571 RchiOBHm_Chr1g0316601 RchiOBHm_Chr5g0039341 RchiOBHm_Chr5g0041371 RchiOBHm_Chr5g0041401 RchiOBHm_Chr5g0041431 RchiOBHm_Chr5g0041471 RchiOBHm_Chr5g0045281 RchiOBHm_Chr5g0045291 RchiOBHm_Chr5g0045311 RchiOBHm_Chr5g0045371 RchiOBHm_Chr5g0045421 RchiOBHm_Chr5g0045431 RchiOBHm_Chr5g0045501 RchiOBHm_Chr5g0045551 RchiOBHm_Chr5g0045771 RchiOBHm_Chr5g0045811
rosa_laevigata RLG00000034057 RLG00000034058
rosa_multiflora Rmu_co8352751.1_g000001 Rmu_co8397575.1_g000001 Rmu_sc0000415.1_g000006 Rmu_sc0000493.1_g000057 Rmu_sc0000504.1_g000003 Rmu_sc0000594.1_g000019 Rmu_sc0000594.1_g000032 Rmu_sc0000594.1_g000066 Rmu_sc0001047.1_g000003 Rmu_sc0001047.1_g000011 Rmu_sc0001556.1_g000023 Rmu_sc0002584.1_g000003 Rmu_sc0002584.1_g000039 Rmu_sc0002584.1_g000070 Rmu_sc0002667.1_g000015 Rmu_sc0003677.1_g000003 Rmu_sc0003743.1_g000017 Rmu_sc0004520.1_g000004 Rmu_sc0004520.1_g000013 Rmu_sc0004520.1_g000027 Rmu_sc0005539.1_g000014 Rmu_sc0005539.1_g000032 Rmu_sc0006018.1_g000006 Rmu_sc0006737.1_g000020 Rmu_sc0007485.1_g000002 Rmu_sc0008729.1_g000002 Rmu_sc0008729.1_g000003 Rmu_sc0038822.1_g000001 Rmu_ssc0000398.1_g000025
rosa_roxburghii Rroxscaffold_1G00035090 Rroxscaffold_1G00035630 Rroxscaffold_1G00035640 Rroxscaffold_1G00035660 Rroxscaffold_1G00035680 Rroxscaffold_1G00035730 Rroxscaffold_1G00035750 Rroxscaffold_1G00035770 Rroxscaffold_1G00039150 Rroxscaffold_1G00039190 Rroxscaffold_1G00039220 Rroxscaffold_1G00039260 Rroxscaffold_4G00328910 Rroxscaffold_4G00328950 Rroxscaffold_4G00328960 Rroxscaffold_4G00330890
rosa_rugosa Rorug01G0009800 Rorug01G0010000.1 Rorug01G0010200 Rorug01G0012100 Rorug01G0023500 Rorug01G0023600 Rorug01G0023700 Rorug01G0024700 Rorug05G0192000 Rorug05G0192200 Rorug05G0222400 Rorug05G0222500 Rorug05G0222600.1 Rorug05G0222700.1 Rorug05G0222800.1 Rorug05G0222900.1 Rorug05G0223000.1 Rorug05G0223100.1 Rorug05G0223200 Rorug05G0223600 Rorug05G0226800 Rorug05G0226900
rosa_samantha Rh1CG019600 Rh1DG015000 Rh1DG015300 Rh1DG016900 Rh5CG315200 Rh5CG338700 Rh5DG277100 Rh5DG291500 Rh5DG292100 Rh5DG292200 Rh5DG292400 Rh5DG292600 Rh5DG322100 Rh5DG322200 Rh5DG323100 Rh5DG323300 Rh5DG326700 Rh5DG326900 Rh5DG327000
rosa_wichuraiana Rw0G021580 Rw1G001320 Rw1G001420 Rw1G002820 Rw1G002840 Rw1G002870 Rw5G024800 Rw5G026160 Rw5G026170 Rw5G026180 Rw5G026210 Rw5G026230 Rw5G028170 Rw5G028190 Rw5G028210 Rw5G028230 Rw5G028240 Rw5G028260 Rw5G028280 Rw5G028370 Rw5G028380 Rw5G028840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 975
AccI GTMKAC 1 cut(s) 742
AciI CCGC 2 cut(s) 395, 1452
AclWI GGATC 2 cut(s) 62, 224
AcoI YGGCCR 1 cut(s) 51
AcsI RAATTY 5 cut(s) 39, 216, 236, 710, 1339
AcuI CTGAAG 3 cut(s) 367, 690, 1569
AdeI CACNNNGTG 1 cut(s) 313
AfaI GTAC 5 cut(s) 30, 533, 1224, 1401, 1642
AfeI AGCGCT 1 cut(s) 1173
AfiI CCNNNNNNNGG 1 cut(s) 1239
AflIII ACRYGT 2 cut(s) 301, 1006
AhlI ACTAGT 1 cut(s) 820
AjnI CCWGG 5 cut(s) 34, 727, 763, 936, 1402
AjuI GAANNNNNNNTTGG 2 cut(s) 887, 919
AleI CACNNNNGTG 1 cut(s) 1311
AluBI AGCT 4 cut(s) 206, 680, 911, 1634
AluI AGCT 4 cut(s) 206, 680, 911, 1634
Alw26I GTCTC 2 cut(s) 138, 1442
AlwI GGATC 2 cut(s) 62, 224
Aor51HI AGCGCT 1 cut(s) 1173
AoxI GGCC 2 cut(s) 51, 378
ApoI RAATTY 5 cut(s) 39, 216, 236, 710, 1339
Asp700I GAANNNNTTC 1 cut(s) 703
AspLEI GCGC 1 cut(s) 1174
AsuHPI GGTGA 4 cut(s) 479, 706, 1325, 1565
AsuII TTCGAA 1 cut(s) 906
BalI TGGCCA 1 cut(s) 53
BanI GGYRCC 1 cut(s) 975
BarI GAAGNNNNNNTAC 2 cut(s) 764, 796
BauI CACGAG 1 cut(s) 657
BbsI GAAGAC 1 cut(s) 366
BccI CCATC 7 cut(s) 43, 328, 496, 865, 1472, 1621, 1671
BceAI ACGGC 1 cut(s) 393
BciT130I CCWGG 5 cut(s) 36, 729, 765, 938, 1404
BclI TGATCA 2 cut(s) 856, 1812
BcoDI GTCTC 2 cut(s) 138, 1442
BcuI ACTAGT 1 cut(s) 820
BfaI CTAG 6 cut(s) 249, 614, 696, 821, 1046, 1819
BfmI CTRYAG 2 cut(s) 784, 912
BfoI RGCGCY 1 cut(s) 1175
Bme1390I CCNGG 5 cut(s) 36, 729, 765, 938, 1404
BmiI GGNNCC 1 cut(s) 977
BmrFI CCNGG 5 cut(s) 36, 729, 765, 938, 1404
BmsI GCATC 4 cut(s) 615, 799, 1030, 1628
BpiI GAAGAC 1 cut(s) 366
BplI GAGNNNNNCTC 4 cut(s) 1046, 1078, 1473, 1505
Bpu14I TTCGAA 1 cut(s) 906
BpuEI CTTGAG 1 cut(s) 868
BsaI GGTCTC 1 cut(s) 1442
BsaJI CCNNGG 6 cut(s) 543, 651, 763, 1268, 1716, 1799
BsaWI WCCGGW 1 cut(s) 56
Bsc4I CCNNNNNNNGG 1 cut(s) 1239
Bse1I ACTGG 2 cut(s) 327, 360
Bse3DI GCAATG 3 cut(s) 282, 387, 1568
BseBI CCWGG 5 cut(s) 36, 729, 765, 938, 1404
BseDI CCNNGG 6 cut(s) 543, 651, 763, 1268, 1716, 1799
BseGI GGATG 7 cut(s) 343, 886, 1248, 1329, 1527, 1619, 1682
BseLI CCNNNNNNNGG 1 cut(s) 1239
BseMI GCAATG 3 cut(s) 282, 387, 1568
BseMII CTCAG 1 cut(s) 1576
BseNI ACTGG 2 cut(s) 327, 360
BseRI GAGGAG 1 cut(s) 276
BsgI GTGCAG 2 cut(s) 66, 1721
BshFI GGCC 2 cut(s) 53, 380
BshNI GGYRCC 1 cut(s) 975
BsiSI CCGG 3 cut(s) 57, 291, 402
BslFI GGGAC 5 cut(s) 281, 519, 888, 1423, 1697
BslI CCNNNNNNNGG 1 cut(s) 1239
BsmAI GTCTC 2 cut(s) 138, 1442
BsmBI CGTCTC 1 cut(s) 138
BsmFI GGGAC 5 cut(s) 281, 519, 888, 1423, 1697
BsmI GAATGC 2 cut(s) 705, 833
BsnI GGCC 2 cut(s) 53, 380
Bso31I GGTCTC 1 cut(s) 1442
Bsp119I TTCGAA 1 cut(s) 906
Bsp1407I TGTACA 1 cut(s) 1222
Bsp143I GATC 5 cut(s) 67, 229, 856, 1565, 1812
Bsp19I CCATGG 1 cut(s) 1799
BspACI CCGC 2 cut(s) 395, 1452
BspANI GGCC 2 cut(s) 53, 380
BspCNI CTCAG 1 cut(s) 1575
BspHI TCATGA 1 cut(s) 859
BspLI GGNNCC 1 cut(s) 977
BspPI GGATC 2 cut(s) 62, 224
BspT104I TTCGAA 1 cut(s) 906
BspT107I GGYRCC 1 cut(s) 975
BspTNI GGTCTC 1 cut(s) 1442
BsrDI GCAATG 3 cut(s) 282, 387, 1568
BsrGI TGTACA 1 cut(s) 1222
BsrI ACTGG 2 cut(s) 327, 360
BssECI CCNNGG 6 cut(s) 543, 651, 763, 1268, 1716, 1799
BssMI GATC 5 cut(s) 67, 229, 856, 1565, 1812
BssSI CACGAG 1 cut(s) 657
BssT1I CCWWGG 3 cut(s) 543, 651, 1799
Bst2BI CACGAG 1 cut(s) 657
Bst2UI CCWGG 5 cut(s) 36, 729, 765, 938, 1404
Bst4CI ACNGT 4 cut(s) 274, 1222, 1375, 1661
Bst6I CTCTTC 2 cut(s) 1290, 1504
BstAUI TGTACA 1 cut(s) 1222
BstBI TTCGAA 1 cut(s) 906
BstC8I GCNNGC 1 cut(s) 167
BstDEI CTNAG 1 cut(s) 1562
BstDSI CCRYGG 3 cut(s) 1268, 1716, 1799
BstENI CCTNNNNNAGG 1 cut(s) 1237
BstF5I GGATG 7 cut(s) 343, 886, 1248, 1329, 1527, 1619, 1682
BstH2I RGCGCY 1 cut(s) 1175
BstHHI GCGC 1 cut(s) 1174
BstKTI GATC 5 cut(s) 70, 232, 859, 1568, 1815
BstMAI GTCTC 2 cut(s) 138, 1442
BstMBI GATC 5 cut(s) 67, 229, 856, 1565, 1812
BstMWI GCNNNNNNNGC 6 cut(s) 293, 398, 1133, 1180, 1367, 1727
BstNI CCWGG 5 cut(s) 36, 729, 765, 938, 1404
BstNSI RCATGY 2 cut(s) 305, 1010
BstSCI CCNGG 5 cut(s) 34, 727, 763, 936, 1402
BstSFI CTRYAG 2 cut(s) 784, 912
BstV2I GAAGAC 1 cut(s) 366
BstX2I RGATCY 1 cut(s) 67
BstXI CCANNNNNNTGG 1 cut(s) 735
BstYI RGATCY 1 cut(s) 67
BsuRI GGCC 2 cut(s) 53, 380
BtgI CCRYGG 3 cut(s) 1268, 1716, 1799
BtsCI GGATG 7 cut(s) 343, 886, 1248, 1329, 1527, 1619, 1682
BtsI GCAGTG 2 cut(s) 948, 1332
BtsIMutI CAGTG 4 cut(s) 270, 353, 948, 1332
Cac8I GCNNGC 1 cut(s) 167
CciI TCATGA 1 cut(s) 859
CfoI GCGC 1 cut(s) 1174
CseI GACGC 1 cut(s) 155
CsiI ACCWGGT 1 cut(s) 1402
Csp6I GTAC 5 cut(s) 29, 532, 1223, 1400, 1641
CviQI GTAC 5 cut(s) 29, 532, 1223, 1400, 1641
DdeI CTNAG 1 cut(s) 1562
DpnI GATC 5 cut(s) 69, 231, 858, 1567, 1814
DpnII GATC 5 cut(s) 67, 229, 856, 1565, 1812
DraIII CACNNNGTG 1 cut(s) 313
EaeI YGGCCR 1 cut(s) 51
Eam1104I CTCTTC 2 cut(s) 1290, 1504
EarI CTCTTC 2 cut(s) 1290, 1504
Eco130I CCWWGG 3 cut(s) 543, 651, 1799
Eco31I GGTCTC 1 cut(s) 1442
Eco32I GATATC 1 cut(s) 1075
Eco47III AGCGCT 1 cut(s) 1173
Eco57I CTGAAG 3 cut(s) 367, 690, 1569
EcoNI CCTNNNNNAGG 1 cut(s) 1237
EcoRI GAATTC 2 cut(s) 39, 710
EcoRII CCWGG 5 cut(s) 34, 727, 763, 936, 1402
EcoRV GATATC 1 cut(s) 1075
EcoT14I CCWWGG 3 cut(s) 543, 651, 1799
ErhI CCWWGG 3 cut(s) 543, 651, 1799
Esp3I CGTCTC 1 cut(s) 138
FaqI GGGAC 5 cut(s) 281, 519, 888, 1423, 1697
FauNDI CATATG 2 cut(s) 1119, 1809
FbaI TGATCA 2 cut(s) 856, 1812
FblI GTMKAC 1 cut(s) 742
FokI GGATG 7 cut(s) 350, 873, 1255, 1336, 1514, 1606, 1689
FspBI CTAG 6 cut(s) 249, 614, 696, 821, 1046, 1819
GlaI GCGC 1 cut(s) 1173
HaeII RGCGCY 1 cut(s) 1175
HaeIII GGCC 2 cut(s) 53, 380
HapII CCGG 3 cut(s) 57, 291, 402
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 1174
Hin6I GCGC 1 cut(s) 1172
HinP1I GCGC 1 cut(s) 1172
HinfI GANTC 3 cut(s) 744, 1593, 1687
HpaII CCGG 3 cut(s) 57, 291, 402
HphI GGTGA 4 cut(s) 479, 706, 1325, 1565
Hpy166II GTNNAC 2 cut(s) 307, 743
Hpy188I TCNGA 5 cut(s) 709, 996, 1417, 1565, 1756
Hpy188III TCNNGA 6 cut(s) 233, 659, 847, 860, 962, 1164
Hpy8I GTNNAC 2 cut(s) 307, 743
HpyCH4III ACNGT 4 cut(s) 274, 1222, 1375, 1661
HpyCH4IV ACGT 1 cut(s) 1540
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 398, 1133, 1180, 1367, 1727
HpyF3I CTNAG 1 cut(s) 1562
HpySE526I ACGT 1 cut(s) 1540
HspAI GCGC 1 cut(s) 1172
Ksp22I TGATCA 2 cut(s) 856, 1812
Kzo9I GATC 5 cut(s) 67, 229, 856, 1565, 1812
LmnI GCTCC 2 cut(s) 293, 1166
LweI GCATC 4 cut(s) 615, 799, 1030, 1628
MabI ACCWGGT 1 cut(s) 1402
MaeI CTAG 6 cut(s) 249, 614, 696, 821, 1046, 1819
MaeII ACGT 1 cut(s) 1540
MaeIII GTNAC 3 cut(s) 635, 1081, 1661
MalI GATC 5 cut(s) 69, 231, 858, 1567, 1814
MboI GATC 5 cut(s) 67, 229, 856, 1565, 1812
MboII GAAGA 9 cut(s) 235, 371, 445, 448, 634, 1030, 1307, 1491, 1758
MfeI CAATTG 1 cut(s) 196
MflI RGATCY 1 cut(s) 67
MlsI TGGCCA 1 cut(s) 53
MluNI TGGCCA 1 cut(s) 53
MlyI GAGTC 2 cut(s) 738, 1587
MmeI TCCRAC 2 cut(s) 534, 749
Mox20I TGGCCA 1 cut(s) 53
MroXI GAANNNNTTC 1 cut(s) 703
MscI TGGCCA 1 cut(s) 53
MseI TTAA 1 cut(s) 968
MslI CAYNNNNRTG 3 cut(s) 981, 1026, 1311
Msp20I TGGCCA 1 cut(s) 53
MspI CCGG 3 cut(s) 57, 291, 402
MspR9I CCNGG 5 cut(s) 36, 729, 765, 938, 1404
MunI CAATTG 1 cut(s) 196
Mva1269I GAATGC 2 cut(s) 705, 833
MvaI CCWGG 5 cut(s) 36, 729, 765, 938, 1404
MwoI GCNNNNNNNGC 6 cut(s) 293, 398, 1133, 1180, 1367, 1727
NcoI CCATGG 1 cut(s) 1799
NdeI CATATG 2 cut(s) 1119, 1809
NdeII GATC 5 cut(s) 67, 229, 856, 1565, 1812
NlaIV GGNNCC 1 cut(s) 977
NmeAIII GCCGAG 1 cut(s) 1364
NmuCI GTSAC 2 cut(s) 1081, 1661
NspI RCATGY 2 cut(s) 305, 1010
NspV TTCGAA 1 cut(s) 906
OliI CACNNNNGTG 1 cut(s) 1311
PagI TCATGA 1 cut(s) 859
PciI ACATGT 2 cut(s) 301, 1006
PctI GAATGC 2 cut(s) 705, 833
PdmI GAANNNNTTC 1 cut(s) 703
PfeI GAWTC 1 cut(s) 1687
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 727
PleI GAGTC 2 cut(s) 738, 1587
PpsI GAGTC 2 cut(s) 738, 1587
PscI ACATGT 2 cut(s) 301, 1006
Psp6I CCWGG 5 cut(s) 34, 727, 763, 936, 1402
PspGI CCWGG 5 cut(s) 34, 727, 763, 936, 1402
PspN4I GGNNCC 1 cut(s) 977
PsuI RGATCY 1 cut(s) 67
PsyI GACNNNGTC 1 cut(s) 272
RsaI GTAC 5 cut(s) 30, 533, 1224, 1401, 1642
RsaNI GTAC 5 cut(s) 29, 532, 1223, 1400, 1641
RseI CAYNNNNRTG 3 cut(s) 981, 1026, 1311
SaqAI TTAA 1 cut(s) 968
Sau3AI GATC 5 cut(s) 67, 229, 856, 1565, 1812
SchI GAGTC 2 cut(s) 738, 1587
ScrFI CCNGG 5 cut(s) 36, 729, 765, 938, 1404
SexAI ACCWGGT 1 cut(s) 1402
SfaNI GCATC 4 cut(s) 615, 799, 1030, 1628
SfcI CTRYAG 2 cut(s) 784, 912
SfuI TTCGAA 1 cut(s) 906
SmiMI CAYNNNNRTG 3 cut(s) 981, 1026, 1311
SmlI CTYRAG 1 cut(s) 847
SmoI CTYRAG 1 cut(s) 847
SpeI ACTAGT 1 cut(s) 820
SsiI CCGC 2 cut(s) 395, 1452
SspMI CTAG 6 cut(s) 249, 614, 696, 821, 1046, 1819
StyD4I CCNGG 5 cut(s) 34, 727, 763, 936, 1402
StyI CCWWGG 3 cut(s) 543, 651, 1799
TaaI ACNGT 4 cut(s) 274, 1222, 1375, 1661
TaiI ACGT 1 cut(s) 1543
TaqI TCGA 6 cut(s) 107, 327, 460, 804, 825, 906
TatI WGTACW 4 cut(s) 28, 531, 1222, 1640
TauI GCSGC 1 cut(s) 398
TfiI GAWTC 1 cut(s) 1687
Tru1I TTAA 1 cut(s) 968
Tru9I TTAA 1 cut(s) 968
TscAI CASTG 4 cut(s) 277, 360, 948, 1339
TseFI GTSAC 2 cut(s) 1081, 1661
Tsp45I GTSAC 2 cut(s) 1081, 1661
TspDTI ATGAA 7 cut(s) 354, 446, 1259, 1308, 1340, 1516, 1597
TspRI CASTG 4 cut(s) 277, 360, 948, 1339
Tth111I GACNNNGTC 1 cut(s) 272
XagI CCTNNNNNAGG 1 cut(s) 1237
XapI RAATTY 5 cut(s) 39, 216, 236, 710, 1339
XceI RCATGY 2 cut(s) 305, 1010
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
XmiI GTMKAC 1 cut(s) 742
XmnI GAANNNNTTC 1 cut(s) 703
XspI CTAG 6 cut(s) 249, 614, 696, 821, 1046, 1819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.