Rorug02G0285700
MYB Family

Myb/SANT-like DNA-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000240
Physical Location & Seq
Forward (+)
31134541 .. 31136318
1778 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0285700.1

Sequence Viewer

Length: 1500 bp
ATGTCTTCATCTTACTGCTCAGTACTCACGTTGTTAACAATGTCTTCATCTTCTTCTTCCACCCCATCTAACTCATCATCATCTGCACCACCAAAGCTTCCATTGAAACCAATCCCAGGCGACTATGGCTTACCCTTCTTCGGTCCCATCAAAGATCGTTACAACTATTTCTACAACCAAGGAAAAGATGAGTTCTTCAAAACCCGAATTCAAAACTACAACTCCACAGTATTCCGTACCAACATGCCTCCCGGCTCCTTCATCGCTTCAAATCCTAAAGTCATTGCCGTCCTCGACGCTGTGAGCTTCCCCGTTCTCTTCGACACCTCCAAAGTCGAAAAACGTAACGTCTTGGACGGCACCTACATGCCCTCCACATCCTTCACCGGCGGCTATCGCGTCTGCGCCTATCTCGACCCCTCAGAACCGAACCACGCTTCTCTTAAGCGCTTCTTCTTATCTCTACTCGCCAGTCGCCACCACAAGGTCATCCCACTCTTCCAAAACCACTTGTCCGACCTCTTTCTCAACCTGGAAACTGAAATTTCAAAAAATGGCAAAGCAAACTTCAACACCCTGAGCGACGACATGTCCTTTAAGTTCGTCTTTTCGCTGTTCTGCGGGTCAGAAAATACTTCATTGGGTTCCAAAGGGCCGAACCTGGTGGCCGTATGGCTCGCGCCGCAACTAGCTCCGCAGATCACACTCGGGTCGCCCAAGTTGCTGAGCTTTGCTGAAGATTTCTTGCTGCACACGTTTTCCTACCCTGCATTTTTGGTCAAATCGGCCTACAAGAAGCTCTACGATGTATTTTACGAGTCGTCGGCTTCGGTTTTAGACGAGGCCGAGAATAGTTTCGGGATTCCGAGAGACGAAGCTTGCCACAACCTTTTGTTTTTGGCTTGCTTCAATGCTTTTGGCGGCATGAAGCTTTTGTTCCCTTCTTTAATCAAGTGGGTTGGATCCGCAGGAGAGGATTTGCACTGCCAGCTCCGAAATGAAATCAGGGCCGTTGTTAAGGAAAATGATGGGAATGTTACTTTCTCGGCGTTGGATAAGATGACTTTGACCAAGTCCGTGGTTTATGAGGCTTTGCGCATCGAGCCTCCGGTGCCGTTCCAGTACGGGAAGGCCAAGGAGGATATTGTGGTCCATAGCCATGATGCGGCATTTGAGATCAAGAAGGGGGAAATGATCTTCGGATATCAACCGTTCGCCACGAAGGATCCGAAGATTTTCGAGAATCCGGAGGAGTTTGTGGGGCATAGGTTTGTAGGAGAAGGTGAGAGATTATTGAAGTATGTTTATTGGTCGAATGGTCGCGAGACCGATGATCCAACTGTGGAGAATAAGCAGTGCGCGGGGAAGGATTTGGTGTTGATTATGTCTAGGTTAATGTTGGTAGAGTTTTTCCTTCGGTATGACACTTGTACCGTTGATGTGACTACGGTGTCATTGGGTGCATCAGTGACGTTCAAAACATTGATCAAGGCCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-bind_3

Protein Analysis

499

Amino Acids

55.7

Weight (kDa)

6.57

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 328 - 436 6.5e-17 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11300
fragaria_vesca FvH4_1g19130 FvH4_1g28413 FvH4_2g11122 FvH4_3g19652 FvH4_3g29921 FvH4_4g07761 FvH4_4g20923 FvH4_5g23913 FvH4_5g23913 FvH4_6g38850 FvH4_6g39920 FvH4_6g53022 FvH4_7g00070 FvH4_7g08972 FvH4_7g12221
malus_domestica MD06G1090800.v1.1 MD15G1314200.v1.1 MD16G1231800.v1.1
prunus_persica Prupe.1G173000_v2.0.a1 Prupe.4G113600_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G020800_v2.0.a1 Prupe.5G207000_v2.0.a1 Prupe.6G155900_v2.0.a1 Prupe.8G016500_v2.0.a1
pyrus_communis pycom03g16230 pycom04g16130 pycom05g03970 pycom05g10500 pycom08g06480 pycom08g11770 pycom12g11350 pycom12g18510 pycom13g02550 pycom13g13780 pycom13g27450 pycom13g27460 pycom15g26130 pycom15g27470
rosa_chinensis RchiOBHm_Chr2g0103961 RchiOBHm_Chr2g0128681 RchiOBHm_Chr2g0153151 RchiOBHm_Chr3g0459461 RchiOBHm_Chr4g0406011 RchiOBHm_Chr4g0428601 RchiOBHm_Chr5g0029731 RchiOBHm_Chr5g0069971 RchiOBHm_Chr6g0253171 RchiOBHm_Chr6g0254701 RchiOBHm_Chr7g0199281
rosa_laevigata RLG00000002281 RLG00000007586 RLG00000008509 RLG00000008888 RLG00000009501 RLG00000012763
rosa_multiflora Rmu_sc0000008.1_g000009 Rmu_sc0000079.1_g000058 Rmu_sc0000117.1_g000008 Rmu_sc0000151.1_g000009 Rmu_sc0000166.1_g000053 Rmu_sc0000240.1_g000064 Rmu_sc0000435.1_g000013 Rmu_sc0000552.1_g000019 Rmu_sc0000776.1_g000078 Rmu_sc0001597.1_g000012 Rmu_sc0001759.1_g000017 Rmu_sc0002137.1_g000011 Rmu_sc0002933.1_g000006 Rmu_sc0002938.1_g000049 Rmu_sc0003257.1_g000014 Rmu_sc0003465.1_g000054 Rmu_sc0003505.1_g000025 Rmu_sc0003526.1_g000016 Rmu_sc0003829.1_g000021 Rmu_sc0003855.1_g000002 Rmu_sc0005514.1_g000003 Rmu_sc0005514.1_g000004 Rmu_sc0007820.1_g000001 Rmu_sc0008322.1_g000016 Rmu_sc0008636.1_g000003 Rmu_sc0008812.1_g000009 Rmu_sc0010960.1_g000003 Rmu_sc0011753.1_g000001 Rmu_sc0013017.1_g000001 Rmu_sc0013176.1_g000005 Rmu_sc0015928.1_g000001 Rmu_sc0020751.1_g000003 Rmu_sc0038865.1_g000001 Rmu_ssc0000089.1_g000008 Rmu_ssc0000164.1_g000007 Rmu_ssc0000388.1_g000013 Rmu_ssc0000400.1_g000076 Rmu_ssc0000486.1_g000012
rosa_roxburghii Rroxscaffold_1G00005880 Rroxscaffold_1G00051030 Rroxscaffold_2G00107440 Rroxscaffold_2G00115370 Rroxscaffold_2G00115870 Rroxscaffold_2G00146360 Rroxscaffold_3G00228870 Rroxscaffold_3G00230350 Rroxscaffold_3G00246190 Rroxscaffold_6G00423350 Rroxscaffold_7G00157820 Rroxscaffold_7G00184840 Rroxscaffold_7G00186490
rosa_rugosa Rorug02G0248700 Rorug02G0279900 Rorug02G0285600 Rorug02G0285700 Rorug03G0068700 Rorug03G0077100 Rorug03G0247700 Rorug03G0304800 Rorug04G0059600 Rorug05G0104000 Rorug05G0104000 Rorug05G0192000 Rorug05G0247800 Rorug05G0248000 Rorug06G0064100 Rorug06G0244800
rosa_samantha Rh4BG200400 Rh4CG094600 Rh4CG114400 Rh5BG465300 Rh6AG057500
rosa_wichuraiana Rw1G014470 Rw2G026930 Rw5G042730 Rw6G021090 Rw6G022960 Rw6G025470 Rw6G034450 Rw7G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1450
Acc16I TGCGCA 1 cut(s) 1097
AccB1I GGYRCC 2 cut(s) 359, 1111
AccII CGCG 4 cut(s) 399, 680, 1323, 1361
AccIII TCCGGA 1 cut(s) 1246
AciI CCGC 8 cut(s) 390, 621, 683, 695, 921, 966, 1166, 1361
AclWI GGATC 5 cut(s) 957, 970, 1220, 1233, 1328
AcoI YGGCCR 1 cut(s) 666
AcsI RAATTY 2 cut(s) 207, 543
AcuI CTGAAG 1 cut(s) 756
AfaI GTAC 4 cut(s) 24, 238, 1124, 1432
AfeI AGCGCT 1 cut(s) 449
AfiI CCNNNNNNNGG 4 cut(s) 116, 140, 484, 1165
AflII CTTAAG 1 cut(s) 443
AflIII ACRYGT 2 cut(s) 588, 753
AgsI TTSAA 9 cut(s) 106, 199, 212, 270, 549, 571, 910, 1297, 1477
AhdI GACNNNNNGTC 1 cut(s) 589
AjnI CCWGG 3 cut(s) 115, 531, 660
AluBI AGCT 8 cut(s) 97, 306, 692, 729, 799, 878, 931, 991
AluI AGCT 8 cut(s) 97, 306, 692, 729, 799, 878, 931, 991
Alw26I GTCTC 2 cut(s) 864, 1319
AlwI GGATC 5 cut(s) 957, 970, 1220, 1233, 1328
Ama87I CYCGRG 1 cut(s) 707
Aor13HI TCCGGA 1 cut(s) 1246
Aor51HI AGCGCT 1 cut(s) 449
AoxI GGCC 7 cut(s) 653, 666, 786, 843, 1008, 1131, 1491
ApeKI GCWGC 1 cut(s) 748
ApoI RAATTY 2 cut(s) 207, 543
Asp700I GAANNNNTTC 2 cut(s) 854, 1235
AspLEI GCGC 5 cut(s) 407, 450, 682, 1098, 1361
AspS9I GGNCC 4 cut(s) 143, 653, 1008, 1150
AsuC2I CCSGG 1 cut(s) 252
AsuHPI GGTGA 2 cut(s) 376, 1295
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 2 cut(s) 143, 1150
BaeI ACNNNNGTAYC 2 cut(s) 1414, 1447
BamHI GGATCC 2 cut(s) 962, 1225
BanI GGYRCC 2 cut(s) 359, 1111
BbsI GAAGAC 1 cut(s) 36
BbvI GCAGC 1 cut(s) 735
BccI CCATC 3 cut(s) 73, 155, 1022
BceAI ACGGC 5 cut(s) 272, 373, 653, 995, 1099
BciT130I CCWGG 3 cut(s) 117, 533, 662
BclI TGATCA 1 cut(s) 1485
BcnI CCSGG 1 cut(s) 252
BcoDI GTCTC 2 cut(s) 864, 1319
BfaI CTAG 2 cut(s) 689, 1389
BfoI RGCGCY 1 cut(s) 451
BfrI CTTAAG 1 cut(s) 443
BisI GCNGC 5 cut(s) 391, 683, 749, 922, 1167
BlpI GCTNAGC 1 cut(s) 725
BlsI GCNGC 5 cut(s) 392, 684, 750, 923, 1168
BmcAI AGTACT 1 cut(s) 24
Bme1390I CCNGG 4 cut(s) 117, 252, 533, 662
Bme18I GGWCC 2 cut(s) 143, 1150
BmeRI GACNNNNNGTC 1 cut(s) 589
BmeT110I CYCGRG 1 cut(s) 707
BmgT120I GGNCC 4 cut(s) 143, 653, 1008, 1150
BmiI GGNNCC 7 cut(s) 145, 256, 361, 646, 964, 1113, 1227
BmrFI CCNGG 4 cut(s) 117, 252, 533, 662
BmsI GCATC 3 cut(s) 1107, 1153, 1472
BpiI GAAGAC 1 cut(s) 36
Bpu10I CCTNAGC 1 cut(s) 578
Bpu1102I GCTNAGC 1 cut(s) 725
BpuMI CCSGG 1 cut(s) 252
BsaI GGTCTC 1 cut(s) 1319
BsaJI CCNNGG 4 cut(s) 115, 178, 1077, 1134
BsaWI WCCGGW 2 cut(s) 1108, 1246
BsaXI ACNNNNNCTCC 4 cut(s) 206, 236, 356, 386
Bsc4I CCNNNNNNNGG 4 cut(s) 116, 140, 484, 1165
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 2 cut(s) 471, 1120
Bse3DI GCAATG 1 cut(s) 282
BseAI TCCGGA 1 cut(s) 1246
BseBI CCWGG 3 cut(s) 117, 533, 662
BseDI CCNNGG 4 cut(s) 115, 178, 1077, 1134
BseGI GGATG 2 cut(s) 377, 489
BseLI CCNNNNNNNGG 4 cut(s) 116, 140, 484, 1165
BseMI GCAATG 1 cut(s) 282
BseMII CTCAG 4 cut(s) 33, 435, 569, 716
BseNI ACTGG 2 cut(s) 471, 1120
BseRI GAGGAG 1 cut(s) 1265
BseXI GCAGC 1 cut(s) 735
BsgI GTGCAG 2 cut(s) 69, 734
Bsh1236I CGCG 4 cut(s) 399, 680, 1323, 1361
BshFI GGCC 7 cut(s) 655, 668, 788, 845, 1010, 1133, 1493
BshNI GGYRCC 2 cut(s) 359, 1111
BsiHKCI CYCGRG 1 cut(s) 707
BsiSI CCGG 4 cut(s) 252, 387, 1109, 1247
BslFI GGGAC 1 cut(s) 129
BslI CCNNNNNNNGG 4 cut(s) 116, 140, 484, 1165
BsmAI GTCTC 2 cut(s) 864, 1319
BsmBI CGTCTC 1 cut(s) 864
BsmFI GGGAC 1 cut(s) 129
BsnI GGCC 7 cut(s) 655, 668, 788, 845, 1010, 1133, 1493
Bso31I GGTCTC 1 cut(s) 1319
BsoBI CYCGRG 1 cut(s) 707
Bsp13I TCCGGA 1 cut(s) 1246
Bsp143I GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
Bsp1720I GCTNAGC 1 cut(s) 725
Bsp68I TCGCGA 1 cut(s) 1323
BspACI CCGC 8 cut(s) 390, 621, 683, 695, 921, 966, 1166, 1361
BspANI GGCC 7 cut(s) 655, 668, 788, 845, 1010, 1133, 1493
BspCNI CTCAG 4 cut(s) 32, 434, 570, 717
BspEI TCCGGA 1 cut(s) 1246
BspFNI CGCG 4 cut(s) 399, 680, 1323, 1361
BspLI GGNNCC 7 cut(s) 145, 256, 361, 646, 964, 1113, 1227
BspPI GGATC 5 cut(s) 957, 970, 1220, 1233, 1328
BspT107I GGYRCC 2 cut(s) 359, 1111
BspTI CTTAAG 1 cut(s) 443
BspTNI GGTCTC 1 cut(s) 1319
BsrDI GCAATG 1 cut(s) 282
BsrFI RCCGGY 1 cut(s) 386
BsrI ACTGG 2 cut(s) 471, 1120
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 4 cut(s) 115, 178, 1077, 1134
BssMI GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
BssT1I CCWWGG 2 cut(s) 178, 1134
Bst2UI CCWGG 3 cut(s) 117, 533, 662
Bst4CI ACNGT 5 cut(s) 229, 1212, 1342, 1435, 1450
Bst6I CTCTTC 2 cut(s) 323, 503
BstAFI CTTAAG 1 cut(s) 443
BstC8I GCNNGC 4 cut(s) 678, 880, 904, 989
BstDEI CTNAG 4 cut(s) 19, 421, 578, 725
BstDSI CCRYGG 1 cut(s) 1077
BstF5I GGATG 2 cut(s) 377, 489
BstFNI CGCG 4 cut(s) 399, 680, 1323, 1361
BstH2I RGCGCY 1 cut(s) 451
BstHHI GCGC 5 cut(s) 407, 450, 682, 1098, 1361
BstKTI GATC 8 cut(s) 157, 702, 965, 1179, 1197, 1228, 1336, 1488
BstMAI GTCTC 2 cut(s) 864, 1319
BstMBI GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
BstMWI GCNNNNNNNGC 7 cut(s) 126, 396, 682, 721, 988, 1102, 1111
BstNI CCWGG 3 cut(s) 117, 533, 662
BstNSI RCATGY 3 cut(s) 247, 370, 592
BstSCI CCNGG 4 cut(s) 115, 250, 531, 660
BstUI CGCG 4 cut(s) 399, 680, 1323, 1361
BstV1I GCAGC 1 cut(s) 735
BstV2I GAAGAC 1 cut(s) 36
BstX2I RGATCY 2 cut(s) 962, 1225
BstXI CCANNNNNNTGG 1 cut(s) 1078
BstYI RGATCY 2 cut(s) 962, 1225
BsuRI GGCC 7 cut(s) 655, 668, 788, 845, 1010, 1133, 1493
BtgI CCRYGG 1 cut(s) 1077
BtgZI GCGATG 1 cut(s) 247
BtsCI GGATG 2 cut(s) 377, 489
BtsI GCAGTG 2 cut(s) 982, 1361
BtsIMutI CAGTG 3 cut(s) 982, 1361, 1473
BtuMI TCGCGA 1 cut(s) 1323
Cac8I GCNNGC 4 cut(s) 678, 880, 904, 989
CfoI GCGC 5 cut(s) 407, 450, 682, 1098, 1361
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 4 cut(s) 143, 653, 1008, 1150
CseI GACGC 2 cut(s) 305, 388
CsiI ACCWGGT 1 cut(s) 660
Csp6I GTAC 4 cut(s) 23, 237, 1123, 1431
CviAII CATG 5 cut(s) 244, 367, 589, 925, 1160
CviQI GTAC 4 cut(s) 23, 237, 1123, 1431
DdeI CTNAG 4 cut(s) 19, 421, 578, 725
DpnI GATC 8 cut(s) 156, 701, 964, 1178, 1196, 1227, 1335, 1487
DpnII GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
DrdI GACNNNNNNGTC 1 cut(s) 1450
DriI GACNNNNNGTC 1 cut(s) 589
DseDI GACNNNNNNGTC 1 cut(s) 1450
EaeI YGGCCR 1 cut(s) 666
Eam1104I CTCTTC 2 cut(s) 323, 503
Eam1105I GACNNNNNGTC 1 cut(s) 589
EarI CTCTTC 2 cut(s) 323, 503
Eco130I CCWWGG 2 cut(s) 178, 1134
Eco147I AGGCCT 1 cut(s) 1493
Eco31I GGTCTC 1 cut(s) 1319
Eco32I GATATC 1 cut(s) 1205
Eco47I GGWCC 2 cut(s) 143, 1150
Eco47III AGCGCT 1 cut(s) 449
Eco57I CTGAAG 1 cut(s) 756
Eco88I CYCGRG 1 cut(s) 707
EcoRI GAATTC 1 cut(s) 207
EcoRII CCWGG 3 cut(s) 115, 531, 660
EcoRV GATATC 1 cut(s) 1205
EcoT14I CCWWGG 2 cut(s) 178, 1134
ErhI CCWWGG 2 cut(s) 178, 1134
Esp3I CGTCTC 1 cut(s) 864
FaeI CATG 5 cut(s) 247, 370, 592, 928, 1163
FalI AAGNNNNNCTT 4 cut(s) 437, 469, 590, 622
FaqI GGGAC 1 cut(s) 129
FatI CATG 5 cut(s) 243, 366, 588, 924, 1159
FauI CCCGC 2 cut(s) 614, 1354
FbaI TGATCA 1 cut(s) 1485
Fnu4HI GCNGC 5 cut(s) 391, 683, 749, 922, 1167
FokI GGATG 2 cut(s) 364, 476
Fsp4HI GCNGC 5 cut(s) 391, 683, 749, 922, 1167
FspBI CTAG 2 cut(s) 689, 1389
FspI TGCGCA 1 cut(s) 1097
GlaI GCGC 5 cut(s) 406, 449, 681, 1097, 1360
GluI GCNGC 5 cut(s) 391, 683, 749, 922, 1167
HaeII RGCGCY 1 cut(s) 451
HaeIII GGCC 7 cut(s) 655, 668, 788, 845, 1010, 1133, 1493
HapII CCGG 4 cut(s) 252, 387, 1109, 1247
HgaI GACGC 2 cut(s) 305, 388
HhaI GCGC 5 cut(s) 407, 450, 682, 1098, 1361
Hin1II CATG 5 cut(s) 247, 370, 592, 928, 1163
Hin6I GCGC 5 cut(s) 405, 448, 680, 1096, 1359
HinP1I GCGC 5 cut(s) 405, 448, 680, 1096, 1359
HincII GTYRAC 1 cut(s) 36
HindII GTYRAC 1 cut(s) 36
HindIII AAGCTT 3 cut(s) 95, 876, 929
HinfI GANTC 3 cut(s) 818, 862, 1243
HpaI GTTAAC 1 cut(s) 36
HpaII CCGG 4 cut(s) 252, 387, 1109, 1247
HphI GGTGA 2 cut(s) 376, 1295
Hpy166II GTNNAC 1 cut(s) 36
Hpy188I TCNGA 7 cut(s) 424, 517, 628, 867, 995, 1202, 1230
Hpy188III TCNNGA 7 cut(s) 413, 859, 1180, 1240, 1247, 1322, 1497
Hpy8I GTNNAC 1 cut(s) 36
Hpy99I CGWCG 3 cut(s) 299, 587, 826
HpyCH4III ACNGT 5 cut(s) 229, 1212, 1342, 1435, 1450
HpyCH4IV ACGT 5 cut(s) 29, 343, 348, 755, 1472
HpyCH4V TGCA 5 cut(s) 86, 751, 770, 982, 1463
HpyF10VI GCNNNNNNNGC 7 cut(s) 126, 396, 682, 721, 988, 1102, 1111
HpyF3I CTNAG 4 cut(s) 19, 421, 578, 725
HpySE526I ACGT 5 cut(s) 29, 343, 348, 755, 1472
Hsp92II CATG 5 cut(s) 247, 370, 592, 928, 1163
HspAI GCGC 5 cut(s) 405, 448, 680, 1096, 1359
Kpn2I TCCGGA 1 cut(s) 1246
Ksp22I TGATCA 1 cut(s) 1485
KspAI GTTAAC 1 cut(s) 36
Kzo9I GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
LmnI GCTCC 3 cut(s) 260, 697, 996
Lsp1109I GCAGC 1 cut(s) 735
LweI GCATC 3 cut(s) 1107, 1153, 1472
MabI ACCWGGT 1 cut(s) 660
MaeI CTAG 2 cut(s) 689, 1389
MaeII ACGT 5 cut(s) 29, 343, 348, 755, 1472
MaeIII GTNAC 5 cut(s) 158, 344, 1036, 1441, 1468
MalI GATC 8 cut(s) 156, 701, 964, 1178, 1196, 1227, 1335, 1487
MboI GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
MflI RGATCY 2 cut(s) 962, 1225
MluCI AATT 2 cut(s) 207, 543
MlyI GAGTC 1 cut(s) 827
MmeI TCCRAC 4 cut(s) 540, 940, 1032, 1361
MroI TCCGGA 1 cut(s) 1246
MroXI GAANNNNTTC 2 cut(s) 854, 1235
MseI TTAA 6 cut(s) 35, 444, 597, 947, 1017, 1394
MslI CAYNNNNRTG 2 cut(s) 365, 1158
MspCI CTTAAG 1 cut(s) 443
MspI CCGG 4 cut(s) 252, 387, 1109, 1247
MspR9I CCNGG 4 cut(s) 117, 252, 533, 662
MvaI CCWGG 3 cut(s) 117, 533, 662
MvnI CGCG 4 cut(s) 399, 680, 1323, 1361
MwoI GCNNNNNNNGC 7 cut(s) 126, 396, 682, 721, 988, 1102, 1111
NciI CCSGG 1 cut(s) 252
NdeII GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
NlaIII CATG 5 cut(s) 247, 370, 592, 928, 1163
NlaIV GGNNCC 7 cut(s) 145, 256, 361, 646, 964, 1113, 1227
NmeAIII GCCGAG 2 cut(s) 871, 1025
NmuCI GTSAC 2 cut(s) 1441, 1468
NruI TCGCGA 1 cut(s) 1323
NsbI TGCGCA 1 cut(s) 1097
NspI RCATGY 3 cut(s) 247, 370, 592
PceI AGGCCT 1 cut(s) 1493
PciI ACATGT 1 cut(s) 588
PcsI WCGNNNNNNNCGW 1 cut(s) 1226
PdmI GAANNNNTTC 2 cut(s) 854, 1235
PfeI GAWTC 2 cut(s) 862, 1243
PflFI GACNNNGTC 1 cut(s) 1072
PkrI GCNGC 5 cut(s) 392, 684, 750, 923, 1168
PleI GAGTC 1 cut(s) 826
PpsI GAGTC 1 cut(s) 826
PscI ACATGT 1 cut(s) 588
Psp6I CCWGG 3 cut(s) 115, 531, 660
PspGI CCWGG 3 cut(s) 115, 531, 660
PspN4I GGNNCC 7 cut(s) 145, 256, 361, 646, 964, 1113, 1227
PspPI GGNCC 4 cut(s) 143, 653, 1008, 1150
PsuI RGATCY 2 cut(s) 962, 1225
PsyI GACNNNGTC 1 cut(s) 1072
RruI TCGCGA 1 cut(s) 1323
RsaI GTAC 4 cut(s) 24, 238, 1124, 1432
RsaNI GTAC 4 cut(s) 23, 237, 1123, 1431
RseI CAYNNNNRTG 2 cut(s) 365, 1158
SaqAI TTAA 6 cut(s) 35, 444, 597, 947, 1017, 1394
SatI GCNGC 5 cut(s) 391, 683, 749, 922, 1167
Sau3AI GATC 8 cut(s) 154, 699, 962, 1176, 1194, 1225, 1333, 1485
Sau96I GGNCC 4 cut(s) 143, 653, 1008, 1150
ScaI AGTACT 1 cut(s) 24
SchI GAGTC 1 cut(s) 827
ScrFI CCNGG 4 cut(s) 117, 252, 533, 662
SexAI ACCWGGT 1 cut(s) 660
SfaNI GCATC 3 cut(s) 1107, 1153, 1472
SgrAI CRCCGGYG 1 cut(s) 386
SinI GGWCC 2 cut(s) 143, 1150
SmiMI CAYNNNNRTG 2 cut(s) 365, 1158
SmlI CTYRAG 1 cut(s) 443
SmoI CTYRAG 1 cut(s) 443
Sse9I AATT 2 cut(s) 207, 543
SseBI AGGCCT 1 cut(s) 1493
SsiI CCGC 8 cut(s) 390, 621, 683, 695, 921, 966, 1166, 1361
SspMI CTAG 2 cut(s) 689, 1389
StuI AGGCCT 1 cut(s) 1493
StyD4I CCNGG 4 cut(s) 115, 250, 531, 660
StyI CCWWGG 2 cut(s) 178, 1134
TaaI ACNGT 5 cut(s) 229, 1212, 1342, 1435, 1450
TaiI ACGT 5 cut(s) 32, 346, 351, 758, 1475
TaqI TCGA 7 cut(s) 294, 321, 336, 414, 1101, 1239, 1313
TaqII GACCGA 2 cut(s) 131, 1343
TasI AATT 2 cut(s) 207, 543
TatI WGTACW 1 cut(s) 22
TauI GCSGC 4 cut(s) 393, 685, 924, 1169
TfiI GAWTC 2 cut(s) 862, 1243
Tru1I TTAA 6 cut(s) 35, 444, 597, 947, 1017, 1394
Tru9I TTAA 6 cut(s) 35, 444, 597, 947, 1017, 1394
TscAI CASTG 3 cut(s) 989, 1361, 1473
TseFI GTSAC 2 cut(s) 1441, 1468
TseI GCWGC 1 cut(s) 748
Tsp45I GTSAC 2 cut(s) 1441, 1468
TspDTI ATGAA 5 cut(s) 36, 250, 627, 941, 1014
TspGWI ACGGA 2 cut(s) 224, 1066
TspRI CASTG 3 cut(s) 989, 1361, 1473
Tth111I GACNNNGTC 1 cut(s) 1072
Vha464I CTTAAG 1 cut(s) 443
VpaK11BI GGWCC 2 cut(s) 143, 1150
XapI RAATTY 2 cut(s) 207, 543
XceI RCATGY 3 cut(s) 247, 370, 592
XmnI GAANNNNTTC 2 cut(s) 854, 1235
XspI CTAG 2 cut(s) 689, 1389
ZrmI AGTACT 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.