FvH4_6g45590

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000217
Physical Location & Seq
Forward (+)
34965585 .. 34967636
2052 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g45590.t1

Sequence Viewer

Length: 1257 bp
ATGAAACTATATGTAACGCCATTTTACACAGGAAGCAAAGACAAAAACAAGAATTATTTTTTGTGCAATCGGAGTTTCGAAAGTTGTACTTATGACATCGCCGACTTGGAGTCGTTGGTGATATTGCCAAGGCATGTCGCCTTCAAAGGCCACACAGGCTATTACCTTAAGATTGTCTCGAGTGGGATGTTCCAGTTCGTCTCAAAAGATAAGGGGCTTCCTGAGTGCTGGTTCGAGGTCTACACTAATGGCCACGGAAGAGTACAAATCAAGTCACGCCAAAGAAACAGTTACTTGTTCAACATGGGTAACAGGATCCAGTTATATGACTCATCTCCAGACATGGAAGCCACTGATCCAAGAACCTTGTTTATGCCGGTGAAGGTCAGCGGTAATGCGATCGCGCTTAGAAGCTTGTGCGACAACAACTATTACTGCGCACAATACAGTGACGCTAATGGAAGCGACTTCTTGCATGCATGCTACGGCAGCATTGCAGCCGACTCGCGCTTCATTCTGGAAGAGCTTGTTTTGTCTAGGAAAATCTACAATACTGACTTCGACCTCAAGAATGCGATTATCTACGGCGAGACCCCGATCACCATGGCCACCGCCAACGCCAGCAACGACACCGCAAAAGACAACACTGCGGAGTTCCGATTCGAGTACAAGGATAGTACGAGCAGCATGTGGAACTCCTCCAGCTCATGGAGTGTGGGGATGGAAGTCAGCGTCAGCTTCAAAATTCCATTCATCGGTGGTACTGACGTCAGTATTTCCGGTGAGTATGCCGATTCGTACGAGGAGGGAACAGCTGTGACGACCGAAAACACATTAGAGACTACCTACACGGCCACCGTGCCGGCTAACACTTCGATATCTGTGAGCCTGATGGCGACGAGAGGAAAAGGCGACGTGCCTTACTCTTATTATCAGAAGGACGTGCTTTACAACGGTAAAACCGTTGTCTATAAGAAAGATGACGGGCTATACACGGGTATCAATTCATACAACTTTCGCTACGAGGTTACAACATTGAAAGGGCCAAAAACTAGAGCTGATTTGCCGACCCGAGAGCACATGTTGCCGAACCCGTCGGTCAATCCCTCCGTCGAACAAATGCTACCAGTGCCGGCCGCGCCGTCTGGATCAACCACCGGAGTGCAAAACAAGGTGAGCATTTCCACCATGGAACAAGGCTTGGTGAAAATGGAATTAGAAGACGCAGCAGCTCAGTCTGTCGACATGAAACCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

419

Amino Acids

46.51

Weight (kDa)

5.43

Isoelectric Point (pI)

31.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aerolysin PF01117 187 - 310 5.4e-09 Aerolysin toxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 771
Acc16I TGCGCA 1 cut(s) 439
AccB7I CCANNNNNTGG 1 cut(s) 708
AccI GTMKAC 2 cut(s) 240, 1242
AccII CGCG 3 cut(s) 404, 508, 1139
AciI CCGC 5 cut(s) 390, 612, 633, 650, 1137
AclWI GGATC 4 cut(s) 310, 323, 350, 1156
AcoI YGGCCR 4 cut(s) 250, 606, 852, 1134
AcsI RAATTY 1 cut(s) 744
AcyI GRCGYC 1 cut(s) 768
AfaI GTAC 6 cut(s) 88, 264, 668, 679, 763, 800
AfiI CCNNNNNNNGG 2 cut(s) 708, 755
AflII CTTAAG 1 cut(s) 167
AflIII ACRYGT 1 cut(s) 1080
AgsI TTSAA 4 cut(s) 145, 301, 742, 1039
AhdI GACNNNNNGTC 1 cut(s) 109
AjiI CACGTC 2 cut(s) 916, 943
AleI CACNNNNGTG 1 cut(s) 1160
AluBI AGCT 7 cut(s) 414, 526, 705, 738, 815, 1058, 1232
AluI AGCT 7 cut(s) 414, 526, 705, 738, 815, 1058, 1232
Alw21I GWGCWC 1 cut(s) 1080
Alw26I GTCTC 4 cut(s) 181, 205, 584, 833
AlwI GGATC 4 cut(s) 310, 323, 350, 1156
Ama87I CYCGRG 2 cut(s) 178, 1071
AoxI GGCC 6 cut(s) 148, 250, 606, 852, 1043, 1134
ApeKI GCWGC 5 cut(s) 489, 497, 684, 1226, 1229
ApoI RAATTY 1 cut(s) 744
AsiSI GCGATCGC 1 cut(s) 402
AspLEI GCGC 4 cut(s) 406, 440, 510, 1141
AspS9I GGNCC 1 cut(s) 1043
AsuHPI GGTGA 6 cut(s) 130, 391, 592, 794, 1186, 1216
AsuII TTCGAA 1 cut(s) 78
AvaI CYCGRG 2 cut(s) 178, 1071
BaeI ACNNNNGTAYC 4 cut(s) 753, 786, 982, 1015
BalI TGGCCA 2 cut(s) 252, 608
BamHI GGATCC 1 cut(s) 315
BbsI GAAGAC 1 cut(s) 1227
Bbv12I GWGCWC 1 cut(s) 1080
BbvI GCAGC 5 cut(s) 501, 509, 696, 1238, 1241
BccI CCATC 2 cut(s) 715, 886
BceAI ACGGC 4 cut(s) 502, 601, 867, 1126
BcgI CGANNNNNNTGC 2 cut(s) 486, 520
BcoDI GTCTC 4 cut(s) 181, 205, 584, 833
BfaI CTAG 3 cut(s) 537, 1053, 1255
BfrI CTTAAG 1 cut(s) 167
BglI GCCNNNNNGGC 1 cut(s) 156
BisI GCNGC 6 cut(s) 490, 498, 685, 1137, 1227, 1230
BlsI GCNGC 6 cut(s) 491, 499, 686, 1138, 1228, 1231
BmeRI GACNNNNNGTC 1 cut(s) 109
BmeT110I CYCGRG 2 cut(s) 178, 1071
BmgBI CACGTC 2 cut(s) 916, 943
BmgT120I GGNCC 1 cut(s) 1043
BmiI GGNNCC 1 cut(s) 317
BpiI GAAGAC 1 cut(s) 1227
BpmI CTGGAG 2 cut(s) 321, 685
Bpu14I TTCGAA 1 cut(s) 78
BpuEI CTTGAG 1 cut(s) 551
BsaHI GRCGYC 1 cut(s) 768
BsaI GGTCTC 1 cut(s) 584
BsaJI CCNNGG 4 cut(s) 128, 253, 603, 1188
BsaWI WCCGGW 2 cut(s) 779, 1157
Bsc4I CCNNNNNNNGG 2 cut(s) 708, 755
Bse118I RCCGGY 3 cut(s) 376, 862, 1132
Bse1I ACTGG 3 cut(s) 193, 319, 1127
Bse3DI GCAATG 1 cut(s) 492
BseDI CCNNGG 4 cut(s) 128, 253, 603, 1188
BseGI GGATG 2 cut(s) 192, 726
BseLI CCNNNNNNNGG 2 cut(s) 708, 755
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 2 cut(s) 213, 1247
BseNI ACTGG 3 cut(s) 193, 319, 1127
BseRI GAGGAG 2 cut(s) 688, 818
BseX3I CGGCCG 1 cut(s) 1134
BseXI GCAGC 5 cut(s) 501, 509, 696, 1238, 1241
Bsh1236I CGCG 3 cut(s) 404, 508, 1139
Bsh1285I CGRYCG 3 cut(s) 402, 825, 1137
BshFI GGCC 6 cut(s) 150, 252, 608, 854, 1045, 1136
BsiEI CGRYCG 3 cut(s) 402, 825, 1137
BsiHKAI GWGCWC 1 cut(s) 1080
BsiHKCI CYCGRG 2 cut(s) 178, 1071
BsiSI CCGG 5 cut(s) 377, 780, 863, 1133, 1158
BsiWI CGTACG 1 cut(s) 798
BslI CCNNNNNNNGG 2 cut(s) 708, 755
BsmAI GTCTC 4 cut(s) 181, 205, 584, 833
BsmBI CGTCTC 1 cut(s) 205
BsmI GAATGC 1 cut(s) 577
BsnI GGCC 6 cut(s) 150, 252, 608, 854, 1045, 1136
Bso31I GGTCTC 1 cut(s) 584
BsoBI CYCGRG 2 cut(s) 178, 1071
Bsp119I TTCGAA 1 cut(s) 78
Bsp1286I GDGCHC 1 cut(s) 1080
Bsp143I GATC 5 cut(s) 315, 355, 399, 597, 1148
Bsp19I CCATGG 2 cut(s) 603, 1188
BspACI CCGC 5 cut(s) 390, 612, 633, 650, 1137
BspANI GGCC 6 cut(s) 150, 252, 608, 854, 1045, 1136
BspCNI CTCAG 2 cut(s) 214, 1246
BspFNI CGCG 3 cut(s) 404, 508, 1139
BspLI GGNNCC 1 cut(s) 317
BspPI GGATC 4 cut(s) 310, 323, 350, 1156
BspQI GCTCTTC 1 cut(s) 516
BspT104I TTCGAA 1 cut(s) 78
BspTI CTTAAG 1 cut(s) 167
BspTNI GGTCTC 1 cut(s) 584
BsrDI GCAATG 1 cut(s) 492
BsrFI RCCGGY 3 cut(s) 376, 862, 1132
BsrI ACTGG 3 cut(s) 193, 319, 1127
BssAI RCCGGY 3 cut(s) 376, 862, 1132
BssECI CCNNGG 4 cut(s) 128, 253, 603, 1188
BssMI GATC 5 cut(s) 315, 355, 399, 597, 1148
BssNI GRCGYC 1 cut(s) 768
BssT1I CCWWGG 3 cut(s) 128, 603, 1188
Bst4CI ACNGT 5 cut(s) 290, 449, 859, 956, 964
Bst6I CTCTTC 2 cut(s) 253, 516
BstACI GRCGYC 1 cut(s) 768
BstAFI CTTAAG 1 cut(s) 167
BstAPI GCANNNNNTGC 1 cut(s) 1084
BstBI TTCGAA 1 cut(s) 78
BstC8I GCNNGC 5 cut(s) 477, 481, 622, 864, 1134
BstDEI CTNAG 3 cut(s) 222, 407, 1233
BstDSI CCRYGG 3 cut(s) 253, 603, 1188
BstF5I GGATG 2 cut(s) 192, 726
BstFNI CGCG 3 cut(s) 404, 508, 1139
BstHHI GCGC 4 cut(s) 406, 440, 510, 1141
BstKTI GATC 5 cut(s) 318, 358, 402, 600, 1151
BstMAI GTCTC 4 cut(s) 181, 205, 584, 833
BstMBI GATC 5 cut(s) 315, 355, 399, 597, 1148
BstMCI CGRYCG 3 cut(s) 402, 825, 1137
BstMWI GCNNNNNNNGC 5 cut(s) 156, 489, 1084, 1129, 1138
BstNSI RCATGY 5 cut(s) 137, 479, 483, 691, 1084
BstUI CGCG 3 cut(s) 404, 508, 1139
BstV1I GCAGC 5 cut(s) 501, 509, 696, 1238, 1241
BstV2I GAAGAC 1 cut(s) 1227
BstX2I RGATCY 1 cut(s) 315
BstYI RGATCY 1 cut(s) 315
BstZI CGGCCG 1 cut(s) 1134
BsuRI GGCC 6 cut(s) 150, 252, 608, 854, 1045, 1136
BtgI CCRYGG 3 cut(s) 253, 603, 1188
BtgZI GCGATG 1 cut(s) 82
BtrI CACGTC 2 cut(s) 916, 943
BtsCI GGATG 2 cut(s) 192, 726
BtsI GCAGTG 1 cut(s) 645
BtsIMutI CAGTG 4 cut(s) 351, 454, 645, 1134
Cac8I GCNNGC 5 cut(s) 477, 481, 622, 864, 1134
CfoI GCGC 4 cut(s) 406, 440, 510, 1141
Cfr10I RCCGGY 3 cut(s) 376, 862, 1132
Cfr13I GGNCC 1 cut(s) 1043
CseI GACGC 3 cut(s) 461, 721, 1232
Csp6I GTAC 6 cut(s) 87, 263, 667, 678, 762, 799
CviQI GTAC 6 cut(s) 87, 263, 667, 678, 762, 799
DdeI CTNAG 3 cut(s) 222, 407, 1233
DpnI GATC 5 cut(s) 317, 357, 401, 599, 1150
DpnII GATC 5 cut(s) 315, 355, 399, 597, 1148
DriI GACNNNNNGTC 1 cut(s) 109
EaeI YGGCCR 4 cut(s) 250, 606, 852, 1134
EagI CGGCCG 1 cut(s) 1134
Eam1104I CTCTTC 2 cut(s) 253, 516
Eam1105I GACNNNNNGTC 1 cut(s) 109
EarI CTCTTC 2 cut(s) 253, 516
EclXI CGGCCG 1 cut(s) 1134
Eco130I CCWWGG 3 cut(s) 128, 603, 1188
Eco31I GGTCTC 1 cut(s) 584
Eco32I GATATC 1 cut(s) 879
Eco52I CGGCCG 1 cut(s) 1134
Eco88I CYCGRG 2 cut(s) 178, 1071
EcoRV GATATC 1 cut(s) 879
EcoT14I CCWWGG 3 cut(s) 128, 603, 1188
EcoT22I ATGCAT 1 cut(s) 481
ErhI CCWWGG 3 cut(s) 128, 603, 1188
Esp3I CGTCTC 1 cut(s) 205
FalI AAGNNNNNCTT 2 cut(s) 73, 105
FblI GTMKAC 2 cut(s) 240, 1242
Fnu4HI GCNGC 6 cut(s) 490, 498, 685, 1137, 1227, 1230
FokI GGATG 2 cut(s) 199, 733
Fsp4HI GCNGC 6 cut(s) 490, 498, 685, 1137, 1227, 1230
FspBI CTAG 3 cut(s) 537, 1053, 1255
FspI TGCGCA 1 cut(s) 439
GlaI GCGC 4 cut(s) 405, 439, 509, 1140
GluI GCNGC 6 cut(s) 490, 498, 685, 1137, 1227, 1230
GsuI CTGGAG 2 cut(s) 321, 685
HaeIII GGCC 6 cut(s) 150, 252, 608, 854, 1045, 1136
HapII CCGG 5 cut(s) 377, 780, 863, 1133, 1158
HgaI GACGC 3 cut(s) 461, 721, 1232
HhaI GCGC 4 cut(s) 406, 440, 510, 1141
Hin1I GRCGYC 1 cut(s) 768
Hin6I GCGC 4 cut(s) 404, 438, 508, 1139
HinP1I GCGC 4 cut(s) 404, 438, 508, 1139
HincII GTYRAC 1 cut(s) 1243
HindII GTYRAC 1 cut(s) 1243
HindIII AAGCTT 1 cut(s) 412
HinfI GANTC 5 cut(s) 110, 329, 503, 660, 794
HpaII CCGG 5 cut(s) 377, 780, 863, 1133, 1158
HphI GGTGA 6 cut(s) 130, 391, 592, 794, 1186, 1216
Hpy166II GTNNAC 2 cut(s) 241, 1243
Hpy188I TCNGA 3 cut(s) 72, 659, 936
Hpy188III TCNNGA 6 cut(s) 178, 221, 338, 518, 568, 1146
Hpy8I GTNNAC 2 cut(s) 241, 1243
Hpy99I CGWCG 4 cut(s) 901, 917, 1099, 1115
HpyAV CCTTC 3 cut(s) 151, 376, 931
HpyCH4III ACNGT 5 cut(s) 290, 449, 859, 956, 964
HpyCH4IV ACGT 3 cut(s) 768, 915, 942
HpyCH4V TGCA 5 cut(s) 66, 475, 479, 497, 1165
HpyF10VI GCNNNNNNNGC 5 cut(s) 156, 489, 1084, 1129, 1138
HpyF3I CTNAG 3 cut(s) 222, 407, 1233
HpySE526I ACGT 3 cut(s) 768, 915, 942
Hsp92I GRCGYC 1 cut(s) 768
HspAI GCGC 4 cut(s) 404, 438, 508, 1139
KroI GCCGGC 2 cut(s) 862, 1132
KroNI GCCGGC 2 cut(s) 864, 1134
Kzo9I GATC 5 cut(s) 315, 355, 399, 597, 1148
LguI GCTCTTC 1 cut(s) 516
Lsp1109I GCAGC 5 cut(s) 501, 509, 696, 1238, 1241
MaeI CTAG 3 cut(s) 537, 1053, 1255
MaeII ACGT 3 cut(s) 768, 915, 942
MaeIII GTNAC 7 cut(s) 13, 273, 290, 308, 449, 817, 1027
MalI GATC 5 cut(s) 317, 357, 401, 599, 1150
MboI GATC 5 cut(s) 315, 355, 399, 597, 1148
MboII GAAGA 3 cut(s) 270, 533, 1232
MflI RGATCY 1 cut(s) 315
MhlI GDGCHC 1 cut(s) 1080
MlsI TGGCCA 2 cut(s) 252, 608
MluCI AATT 4 cut(s) 52, 744, 1003, 1214
MluNI TGGCCA 2 cut(s) 252, 608
MlyI GAGTC 3 cut(s) 119, 323, 497
MnlI CCTC 8 cut(s) 229, 575, 709, 796, 799, 896, 1018, 1117
Mox20I TGGCCA 2 cut(s) 252, 608
Mph1103I ATGCAT 1 cut(s) 481
MroNI GCCGGC 2 cut(s) 862, 1132
MscI TGGCCA 2 cut(s) 252, 608
MseI TTAA 1 cut(s) 168
MslI CAYNNNNRTG 1 cut(s) 1160
Msp20I TGGCCA 2 cut(s) 252, 608
MspA1I CMGCKG 2 cut(s) 390, 815
MspCI CTTAAG 1 cut(s) 167
MspI CCGG 5 cut(s) 377, 780, 863, 1133, 1158
Mva1269I GAATGC 1 cut(s) 577
MvnI CGCG 3 cut(s) 404, 508, 1139
MwoI GCNNNNNNNGC 5 cut(s) 156, 489, 1084, 1129, 1138
NaeI GCCGGC 2 cut(s) 864, 1134
NcoI CCATGG 2 cut(s) 603, 1188
NdeII GATC 5 cut(s) 315, 355, 399, 597, 1148
NgoMIV GCCGGC 2 cut(s) 862, 1132
NlaIV GGNNCC 1 cut(s) 317
NmuCI GTSAC 3 cut(s) 273, 449, 817
NsbI TGCGCA 1 cut(s) 439
NsiI ATGCAT 1 cut(s) 481
NspI RCATGY 5 cut(s) 137, 479, 483, 691, 1084
NspV TTCGAA 1 cut(s) 78
OliI CACNNNNGTG 1 cut(s) 1160
PaeI GCATGC 2 cut(s) 479, 483
PaeR7I CTCGAG 1 cut(s) 178
PciI ACATGT 1 cut(s) 1080
PciSI GCTCTTC 1 cut(s) 516
PcsI WCGNNNNNNNCGW 2 cut(s) 624, 960
PctI GAATGC 1 cut(s) 577
PdiI GCCGGC 2 cut(s) 864, 1134
PfeI GAWTC 2 cut(s) 660, 794
Pfl23II CGTACG 1 cut(s) 798
PflMI CCANNNNNTGG 1 cut(s) 708
PkrI GCNGC 6 cut(s) 491, 499, 686, 1138, 1228, 1231
Ple19I CGATCG 1 cut(s) 402
PleI GAGTC 3 cut(s) 118, 323, 497
PpsI GAGTC 3 cut(s) 118, 323, 497
PscI ACATGT 1 cut(s) 1080
PspLI CGTACG 1 cut(s) 798
PspN4I GGNNCC 1 cut(s) 317
PspPI GGNCC 1 cut(s) 1043
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PsuI RGATCY 1 cut(s) 315
PvuI CGATCG 1 cut(s) 402
PvuII CAGCTG 1 cut(s) 815
RgaI GCGATCGC 1 cut(s) 402
RsaI GTAC 6 cut(s) 88, 264, 668, 679, 763, 800
RsaNI GTAC 6 cut(s) 87, 263, 667, 678, 762, 799
RseI CAYNNNNRTG 1 cut(s) 1160
SalI GTCGAC 1 cut(s) 1241
SapI GCTCTTC 1 cut(s) 516
SaqAI TTAA 1 cut(s) 168
SatI GCNGC 6 cut(s) 490, 498, 685, 1137, 1227, 1230
Sau3AI GATC 5 cut(s) 315, 355, 399, 597, 1148
Sau96I GGNCC 1 cut(s) 1043
SchI GAGTC 3 cut(s) 119, 323, 497
SduI GDGCHC 1 cut(s) 1080
SfaAI GCGATCGC 1 cut(s) 402
Sfr274I CTCGAG 1 cut(s) 178
SfuI TTCGAA 1 cut(s) 78
SgfI GCGATCGC 1 cut(s) 402
SlaI CTCGAG 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 1160
SmlI CTYRAG 3 cut(s) 167, 178, 566
SmoI CTYRAG 3 cut(s) 167, 178, 566
SphI GCATGC 2 cut(s) 479, 483
Sse9I AATT 4 cut(s) 52, 744, 1003, 1214
SsiI CCGC 5 cut(s) 390, 612, 633, 650, 1137
SspMI CTAG 3 cut(s) 537, 1053, 1255
StyI CCWWGG 3 cut(s) 128, 603, 1188
TaaI ACNGT 5 cut(s) 290, 449, 859, 956, 964
TaiI ACGT 3 cut(s) 771, 918, 945
TaqI TCGA 8 cut(s) 78, 179, 234, 561, 663, 875, 1113, 1242
TaqII GACCGA 2 cut(s) 839, 1087
TasI AATT 4 cut(s) 52, 744, 1003, 1214
TatI WGTACW 3 cut(s) 86, 262, 666
TauI GCSGC 1 cut(s) 1139
TfiI GAWTC 2 cut(s) 660, 794
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TscAI CASTG 4 cut(s) 358, 454, 652, 1134
TseFI GTSAC 3 cut(s) 273, 449, 817
TseI GCWGC 5 cut(s) 489, 497, 684, 1226, 1229
Tsp45I GTSAC 3 cut(s) 273, 449, 817
TspDTI ATGAA 4 cut(s) 17, 502, 742, 996
TspGWI ACGGA 2 cut(s) 270, 1099
TspRI CASTG 4 cut(s) 358, 454, 652, 1134
Van91I CCANNNNNTGG 1 cut(s) 708
Vha464I CTTAAG 1 cut(s) 167
XapI RAATTY 1 cut(s) 744
XceI RCATGY 5 cut(s) 137, 479, 483, 691, 1084
XhoI CTCGAG 1 cut(s) 178
XmiI GTMKAC 2 cut(s) 240, 1242
XspI CTAG 3 cut(s) 537, 1053, 1255
ZraI GACGTC 1 cut(s) 769
Zsp2I ATGCAT 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.