MD02G1240200.v1.1

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000217
Physical Location & Seq
Forward (+)
28881999 .. 28883594
1596 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1240200.v1.1.491

Sequence Viewer

Length: 1596 bp
ATGACATTGCCAAGGTTTGTGGTCGTGAAATCAAACCACAACAGAAAATTCTTGCGCTACATAAAAGATGATGGAGAGGAGAATGCACCAGCCGGGTTTCTCAAATTCTCCGAAGAGGAGGCCGGCAGCCATTACGCAAAGTACGAAGTGGAGACGGCAAAGAATGGAGGGAATAAGGGACTAGTCCACATTAGATGTTGTTACAACAATAAATATTGGGTTAGCGTGACGGGAACGCATAGGTTCGATAACGAGGTTTTGATTGTTGCAGGGGCTGACGAACCCGAGGAAGACAAATCAAAACCCTCATGTACCTTGTTCGAGCCGGTCTACGTAGATCCGGTGGACAAGGACCATGATAATAATAATGATAATAATAATAACAATAATAATAATAATAAAAATAATAATAATTGTGATGATATTGATAGTCAGGTGGTCCAATTTCGGCATGTCCATCTCGGATGTTACGCTACGTTACACAGCAGCTCCGACGCCTTAGTACTTTATGGAGGCTCAACCGCAGCAGACGATCCTAACAATGCAGAGTCGCACGATGTGTGCACAGTCGTCAATTGGGAATCGCTGGTGATATTGCCGAAACATGTGGTGTTCAAGGGAGACGATGGTAACTACCTCACAGCCAATATGGTCGACGACAAGGATATGCACAACAGAGGCGACGAAGAAGATGGGCCGTATCTCCAATTTGATGGTCATGACGCATGTGATCCTATTGCAGCGAATGAGATCTTCAGAAACCCCGACGGAACCTTGCAAATAAAAAACAGTTTCTTCGGAAGATACTGGAGACTCGCCAAAGACAAGTGGATCTGGCCGGACGCGTTTAACCCTACCACCCGAGTCAAAAACTACAAAGACACATTGTATCGGGCGTTCAAGCTTTATGACAAAGCCATAGCTCTCATGAACGAAGGGAACAAGAAGTACTGCAAGAGATACACATGCGGGATTACTGATATTACTGGTATGTGCGCCAACGTCTCTAATCTCTCCATTTATTCACACCTCCACGTTGAAGAGCCTGTTAAGTCGAGGACCATCTACAATGTCAGTTACCGCCTCGCCCATGCCCGGATCTACAATTACCAAAATGACACGGTAATTGCCACAGGAGAAGCCGTCAACTTCACCCAACAAACCACAAACGTAGTACTCAAGTTGCTCTACAAGAAGTCGAATATTTGCAGTTGGAATGATATCAGTAGAGTTTATTCGATAAAGCCGAAAACCAACGTTGAAGCCGATGGCATTCCACAAATCACAGGAGGTGACAACGGAGCGATGAAGTTTGAGATTTCAGGGGGTGAGTTTAAAGGGGCGGTCCAGTGGGGAGAAACCGAGACATCCGAAACTCAAGTGGAGGCTGTTTGCATGGTTGGTGTGCCGGCAATGAGCGTGGTGAAGGTGAGGCTGCTGGCCGCCAAGGCTTCATGTGATGTTCCCTTCTCCTACTCCCGTCGCGACACTGGTAACAATGATCAAGTGCATGTTACTGATGACTTGGACGATGGTTTTTACAGTAGCACCAACGCTTTCAACTTCAAGTATGACATCAAGCAAGAAAGGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

532

Amino Acids

59.87

Weight (kDa)

5.49

Isoelectric Point (pI)

30.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 2 - 115 1.1e-17 Agglutinin domain
Agglutinin PF07468 230 - 336 5.8e-11 Agglutinin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 330, 654
AccII CGCG 2 cut(s) 845, 1485
AciI CCGC 5 cut(s) 522, 969, 1081, 1343, 1443
AclI AACGTT 1 cut(s) 1257
AclWI GGATC 5 cut(s) 332, 527, 725, 839, 1106
AcoI YGGCCR 2 cut(s) 836, 1440
AcsI RAATTY 2 cut(s) 47, 104
AcuI CTGAAG 1 cut(s) 739
AcyI GRCGYC 1 cut(s) 495
AdeI CACNNNGTG 1 cut(s) 559
AfaI GTAC 5 cut(s) 143, 313, 504, 950, 1176
AfiI CCNNNNNNNGG 1 cut(s) 1095
AflIII ACRYGT 2 cut(s) 604, 843
AgsI TTSAA 6 cut(s) 616, 901, 1040, 1262, 1561, 1567
AhlI ACTAGT 1 cut(s) 181
AluBI AGCT 3 cut(s) 489, 904, 923
AluI AGCT 3 cut(s) 489, 904, 923
Alw21I GWGCWC 1 cut(s) 566
Alw26I GTCTC 5 cut(s) 146, 615, 805, 1009, 1358
Alw44I GTGCAC 1 cut(s) 562
AlwI GGATC 5 cut(s) 332, 527, 725, 839, 1106
AlwNI CAGNNNCTG 1 cut(s) 275
Ama87I CYCGRG 2 cut(s) 284, 861
AoxI GGCC 4 cut(s) 120, 695, 836, 1440
ApaLI GTGCAC 1 cut(s) 562
ApeKI GCWGC 5 cut(s) 126, 486, 524, 740, 1435
ApoI RAATTY 2 cut(s) 47, 104
AspLEI GCGC 2 cut(s) 57, 998
AspS9I GGNCC 5 cut(s) 352, 439, 695, 1059, 1345
AsuC2I CCSGG 2 cut(s) 94, 1096
AsuHPI GGTGA 6 cut(s) 601, 1144, 1304, 1340, 1435, 1441
AvaI CYCGRG 2 cut(s) 284, 861
AvaII GGWCC 4 cut(s) 352, 439, 1059, 1345
BaeGI GKGCMC 1 cut(s) 566
BbsI GAAGAC 1 cut(s) 297
Bbv12I GWGCWC 1 cut(s) 566
BbvI GCAGC 5 cut(s) 138, 498, 536, 752, 1422
BccI CCATC 8 cut(s) 65, 465, 620, 686, 707, 1070, 1262, 1526
BceAI ACGGC 3 cut(s) 171, 682, 1127
BclI TGATCA 1 cut(s) 1501
BcnI CCSGG 2 cut(s) 94, 1096
BcoDI GTCTC 5 cut(s) 146, 615, 805, 1009, 1358
BcuI ACTAGT 1 cut(s) 181
BfaI CTAG 1 cut(s) 182
BglI GCCNNNNNGGC 1 cut(s) 1448
BglII AGATCT 1 cut(s) 750
BisI GCNGC 6 cut(s) 127, 487, 525, 741, 1436, 1443
BlsI GCNGC 6 cut(s) 128, 488, 526, 742, 1437, 1444
BmcAI AGTACT 3 cut(s) 504, 950, 1176
Bme1390I CCNGG 2 cut(s) 94, 1096
Bme18I GGWCC 4 cut(s) 352, 439, 1059, 1345
BmeT110I CYCGRG 2 cut(s) 284, 861
BmgT120I GGNCC 5 cut(s) 352, 439, 695, 1059, 1345
BmiI GGNNCC 1 cut(s) 772
BmrFI CCNGG 2 cut(s) 94, 1096
BpiI GAAGAC 1 cut(s) 297
BpmI CTGGAG 1 cut(s) 829
BpuEI CTTGAG 2 cut(s) 1163, 1362
BpuMI CCSGG 2 cut(s) 94, 1096
BsaAI YACGTR 1 cut(s) 334
BsaHI GRCGYC 1 cut(s) 495
BsaJI CCNNGG 3 cut(s) 11, 285, 1446
BsaWI WCCGGW 1 cut(s) 340
BsaXI ACNNNNNCTCC 4 cut(s) 473, 503, 1128, 1158
Bsc4I CCNNNNNNNGG 1 cut(s) 1095
Bse118I RCCGGY 3 cut(s) 122, 325, 1408
Bse1I ACTGG 4 cut(s) 812, 991, 1348, 1495
Bse3DI GCAATG 2 cut(s) 5, 1419
BseDI CCNNGG 3 cut(s) 11, 285, 1446
BseGI GGATG 3 cut(s) 470, 1367, 1596
BseLI CCNNNNNNNGG 1 cut(s) 1095
BseMI GCAATG 2 cut(s) 5, 1419
BseNI ACTGG 4 cut(s) 812, 991, 1348, 1495
BseRI GAGGAG 2 cut(s) 92, 131
BseSI GKGCMC 1 cut(s) 566
BseXI GCAGC 5 cut(s) 138, 498, 536, 752, 1422
Bsh1236I CGCG 2 cut(s) 845, 1485
BshFI GGCC 4 cut(s) 122, 697, 838, 1442
BsiHKAI GWGCWC 1 cut(s) 566
BsiHKCI CYCGRG 2 cut(s) 284, 861
BsiSI CCGG 7 cut(s) 93, 123, 326, 341, 839, 1096, 1409
BslFI GGGAC 1 cut(s) 192
BslI CCNNNNNNNGG 1 cut(s) 1095
BsmAI GTCTC 5 cut(s) 146, 615, 805, 1009, 1358
BsmBI CGTCTC 3 cut(s) 146, 615, 1009
BsmFI GGGAC 1 cut(s) 192
BsmI GAATGC 2 cut(s) 88, 1272
BsnI GGCC 4 cut(s) 122, 697, 838, 1442
BsoBI CYCGRG 2 cut(s) 284, 861
Bsp1286I GDGCHC 1 cut(s) 566
Bsp143I GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
Bsp68I TCGCGA 1 cut(s) 1485
BspACI CCGC 5 cut(s) 522, 969, 1081, 1343, 1443
BspANI GGCC 4 cut(s) 122, 697, 838, 1442
BspFNI CGCG 2 cut(s) 845, 1485
BspHI TCATGA 2 cut(s) 718, 927
BspLI GGNNCC 1 cut(s) 772
BspPI GGATC 5 cut(s) 332, 527, 725, 839, 1106
BspQI GCTCTTC 1 cut(s) 1035
BsrDI GCAATG 2 cut(s) 5, 1419
BsrFI RCCGGY 3 cut(s) 122, 325, 1408
BsrI ACTGG 4 cut(s) 812, 991, 1348, 1495
BssAI RCCGGY 3 cut(s) 122, 325, 1408
BssECI CCNNGG 3 cut(s) 11, 285, 1446
BssMI GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
BssNI GRCGYC 1 cut(s) 495
BssT1I CCWWGG 2 cut(s) 11, 1446
Bst4CI ACNGT 4 cut(s) 568, 791, 1123, 1544
Bst6I CTCTTC 2 cut(s) 108, 1035
BstACI GRCGYC 1 cut(s) 495
BstBAI YACGTR 1 cut(s) 334
BstC8I GCNNGC 3 cut(s) 124, 1410, 1440
BstDEI CTNAG 1 cut(s) 499
BstF5I GGATG 3 cut(s) 470, 1367, 1596
BstFNI CGCG 2 cut(s) 845, 1485
BstHHI GCGC 2 cut(s) 57, 998
BstKTI GATC 7 cut(s) 340, 535, 733, 753, 834, 1101, 1504
BstMAI GTCTC 5 cut(s) 146, 615, 805, 1009, 1358
BstMBI GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
BstMWI GCNNNNNNNGC 1 cut(s) 1448
BstNSI RCATGY 5 cut(s) 455, 608, 729, 969, 1514
BstSCI CCNGG 2 cut(s) 92, 1094
BstSLI GKGCMC 1 cut(s) 566
BstSNI TACGTA 1 cut(s) 334
BstUI CGCG 2 cut(s) 845, 1485
BstV1I GCAGC 5 cut(s) 138, 498, 536, 752, 1422
BstV2I GAAGAC 1 cut(s) 297
BstX2I RGATCY 4 cut(s) 337, 750, 831, 1098
BstXI CCANNNNNNTGG 1 cut(s) 713
BstYI RGATCY 4 cut(s) 337, 750, 831, 1098
BsuRI GGCC 4 cut(s) 122, 697, 838, 1442
BtgZI GCGATG 1 cut(s) 1319
BtsCI GGATG 3 cut(s) 470, 1367, 1596
BtsIMutI CAGTG 2 cut(s) 1355, 1488
BtuMI TCGCGA 1 cut(s) 1485
Cac8I GCNNGC 3 cut(s) 124, 1410, 1440
CaiI CAGNNNCTG 1 cut(s) 275
CciI TCATGA 2 cut(s) 718, 927
CfoI GCGC 2 cut(s) 57, 998
Cfr10I RCCGGY 3 cut(s) 122, 325, 1408
Cfr13I GGNCC 5 cut(s) 352, 439, 695, 1059, 1345
CseI GACGC 3 cut(s) 503, 731, 851
Csp6I GTAC 5 cut(s) 142, 312, 503, 949, 1175
CspCI CAANNNNNGTGG 3 cut(s) 35, 1401, 1436
CviQI GTAC 5 cut(s) 142, 312, 503, 949, 1175
DdeI CTNAG 1 cut(s) 499
DpnI GATC 7 cut(s) 339, 534, 732, 752, 833, 1100, 1503
DpnII GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
DraI TTTAAA 1 cut(s) 1336
DraIII CACNNNGTG 1 cut(s) 559
EaeI YGGCCR 2 cut(s) 836, 1440
Eam1104I CTCTTC 2 cut(s) 108, 1035
EarI CTCTTC 2 cut(s) 108, 1035
Eco105I TACGTA 1 cut(s) 334
Eco130I CCWWGG 2 cut(s) 11, 1446
Eco32I GATATC 1 cut(s) 1222
Eco47I GGWCC 4 cut(s) 352, 439, 1059, 1345
Eco57I CTGAAG 1 cut(s) 739
Eco88I CYCGRG 2 cut(s) 284, 861
EcoRV GATATC 1 cut(s) 1222
EcoT14I CCWWGG 2 cut(s) 11, 1446
ErhI CCWWGG 2 cut(s) 11, 1446
Esp3I CGTCTC 3 cut(s) 146, 615, 1009
FaqI GGGAC 1 cut(s) 192
FauI CCCGC 1 cut(s) 962
FbaI TGATCA 1 cut(s) 1501
FblI GTMKAC 2 cut(s) 330, 654
Fnu4HI GCNGC 6 cut(s) 127, 487, 525, 741, 1436, 1443
FokI GGATG 2 cut(s) 477, 1354
Fsp4HI GCNGC 6 cut(s) 127, 487, 525, 741, 1436, 1443
FspBI CTAG 1 cut(s) 182
GlaI GCGC 2 cut(s) 56, 997
GluI GCNGC 6 cut(s) 127, 487, 525, 741, 1436, 1443
GsuI CTGGAG 1 cut(s) 829
HaeIII GGCC 4 cut(s) 122, 697, 838, 1442
HapII CCGG 7 cut(s) 93, 123, 326, 341, 839, 1096, 1409
HgaI GACGC 3 cut(s) 503, 731, 851
HhaI GCGC 2 cut(s) 57, 998
Hin1I GRCGYC 1 cut(s) 495
Hin6I GCGC 2 cut(s) 55, 996
HinP1I GCGC 2 cut(s) 55, 996
HincII GTYRAC 2 cut(s) 655, 1147
HindII GTYRAC 2 cut(s) 655, 1147
HindIII AAGCTT 1 cut(s) 902
HinfI GANTC 4 cut(s) 548, 581, 813, 864
HpaII CCGG 7 cut(s) 93, 123, 326, 341, 839, 1096, 1409
HphI GGTGA 6 cut(s) 601, 1144, 1304, 1340, 1435, 1441
Hpy166II GTNNAC 6 cut(s) 187, 331, 346, 564, 655, 1147
Hpy188I TCNGA 6 cut(s) 112, 464, 493, 758, 800, 1372
Hpy188III TCNNGA 4 cut(s) 25, 719, 928, 1484
Hpy8I GTNNAC 6 cut(s) 187, 331, 346, 564, 655, 1147
Hpy99I CGWCG 5 cut(s) 497, 659, 686, 770, 1485
HpyAV CCTTC 3 cut(s) 929, 1420, 1477
HpyCH4III ACNGT 4 cut(s) 568, 791, 1123, 1544
HpyCH4IV ACGT 6 cut(s) 333, 476, 1002, 1035, 1170, 1257
HpyF10VI GCNNNNNNNGC 1 cut(s) 1448
HpyF3I CTNAG 1 cut(s) 499
HpySE526I ACGT 6 cut(s) 333, 476, 1002, 1035, 1170, 1257
Hsp92I GRCGYC 1 cut(s) 495
HspAI GCGC 2 cut(s) 55, 996
KroI GCCGGC 2 cut(s) 122, 1408
KroNI GCCGGC 2 cut(s) 124, 1410
Ksp22I TGATCA 1 cut(s) 1501
Kzo9I GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
LguI GCTCTTC 1 cut(s) 1035
LmnI GCTCC 2 cut(s) 494, 1301
Lsp1109I GCAGC 5 cut(s) 138, 498, 536, 752, 1422
MaeI CTAG 1 cut(s) 182
MaeII ACGT 6 cut(s) 333, 476, 1002, 1035, 1170, 1257
MaeIII GTNAC 9 cut(s) 200, 226, 467, 477, 629, 1076, 1292, 1493, 1513
MalI GATC 7 cut(s) 339, 534, 732, 752, 833, 1100, 1503
MboI GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
MboII GAAGA 8 cut(s) 125, 302, 698, 701, 745, 787, 813, 1052
MfeI CAATTG 1 cut(s) 574
MflI RGATCY 4 cut(s) 337, 750, 831, 1098
MhlI GDGCHC 1 cut(s) 566
MluCI AATT 8 cut(s) 47, 104, 412, 443, 574, 707, 1105, 1125
MluI ACGCGT 1 cut(s) 843
MlyI GAGTC 3 cut(s) 557, 807, 873
MmeI TCCRAC 2 cut(s) 516, 1193
MroNI GCCGGC 2 cut(s) 122, 1408
MseI TTAA 3 cut(s) 849, 1050, 1335
MspI CCGG 7 cut(s) 93, 123, 326, 341, 839, 1096, 1409
MspR9I CCNGG 2 cut(s) 94, 1096
MunI CAATTG 1 cut(s) 574
Mva1269I GAATGC 2 cut(s) 88, 1272
MvnI CGCG 2 cut(s) 845, 1485
MwoI GCNNNNNNNGC 1 cut(s) 1448
NaeI GCCGGC 2 cut(s) 124, 1410
NciI CCSGG 2 cut(s) 94, 1096
NdeII GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
NgoMIV GCCGGC 2 cut(s) 122, 1408
NlaIV GGNNCC 1 cut(s) 772
NmuCI GTSAC 2 cut(s) 226, 1292
NruI TCGCGA 1 cut(s) 1485
NspI RCATGY 5 cut(s) 455, 608, 729, 969, 1514
PagI TCATGA 2 cut(s) 718, 927
PciI ACATGT 1 cut(s) 604
PciSI GCTCTTC 1 cut(s) 1035
PcsI WCGNNNNNNNCGW 3 cut(s) 141, 1244, 1263
PctI GAATGC 2 cut(s) 88, 1272
PdiI GCCGGC 2 cut(s) 124, 1410
PfeI GAWTC 1 cut(s) 581
PkrI GCNGC 6 cut(s) 128, 488, 526, 742, 1437, 1444
PleI GAGTC 3 cut(s) 556, 807, 872
PpsI GAGTC 3 cut(s) 556, 807, 872
Ppu21I YACGTR 1 cut(s) 334
PscI ACATGT 1 cut(s) 604
Psp1406I AACGTT 1 cut(s) 1257
PspN4I GGNNCC 1 cut(s) 772
PspPI GGNCC 5 cut(s) 352, 439, 695, 1059, 1345
PsrI GAACNNNNNNTAC 4 cut(s) 881, 913, 932, 964
PstNI CAGNNNCTG 1 cut(s) 275
PsuI RGATCY 4 cut(s) 337, 750, 831, 1098
RruI TCGCGA 1 cut(s) 1485
RsaI GTAC 5 cut(s) 143, 313, 504, 950, 1176
RsaNI GTAC 5 cut(s) 142, 312, 503, 949, 1175
SalI GTCGAC 1 cut(s) 653
SapI GCTCTTC 1 cut(s) 1035
SaqAI TTAA 3 cut(s) 849, 1050, 1335
SatI GCNGC 6 cut(s) 127, 487, 525, 741, 1436, 1443
Sau3AI GATC 7 cut(s) 337, 532, 730, 750, 831, 1098, 1501
Sau96I GGNCC 5 cut(s) 352, 439, 695, 1059, 1345
ScaI AGTACT 3 cut(s) 504, 950, 1176
SchI GAGTC 3 cut(s) 557, 807, 873
ScrFI CCNGG 2 cut(s) 94, 1096
SduI GDGCHC 1 cut(s) 566
SinI GGWCC 4 cut(s) 352, 439, 1059, 1345
SmlI CTYRAG 2 cut(s) 1178, 1377
SmoI CTYRAG 2 cut(s) 1178, 1377
SnaBI TACGTA 1 cut(s) 334
SpeI ACTAGT 1 cut(s) 181
Sse9I AATT 8 cut(s) 47, 104, 412, 443, 574, 707, 1105, 1125
SsiI CCGC 5 cut(s) 522, 969, 1081, 1343, 1443
SspI AATATT 2 cut(s) 215, 1204
SspMI CTAG 1 cut(s) 182
StyD4I CCNGG 2 cut(s) 92, 1094
StyI CCWWGG 2 cut(s) 11, 1446
TaaI ACNGT 4 cut(s) 568, 791, 1123, 1544
TaiI ACGT 6 cut(s) 336, 479, 1005, 1038, 1173, 1260
TaqI TCGA 6 cut(s) 246, 321, 654, 1055, 1199, 1238
TasI AATT 8 cut(s) 47, 104, 412, 443, 574, 707, 1105, 1125
TatI WGTACW 3 cut(s) 502, 948, 1174
TauI GCSGC 1 cut(s) 1445
TfiI GAWTC 1 cut(s) 581
Tru1I TTAA 3 cut(s) 849, 1050, 1335
Tru9I TTAA 3 cut(s) 849, 1050, 1335
TscAI CASTG 2 cut(s) 1355, 1495
TseFI GTSAC 2 cut(s) 226, 1292
TseI GCWGC 5 cut(s) 126, 486, 524, 740, 1435
Tsp45I GTSAC 2 cut(s) 226, 1292
TspDTI ATGAA 3 cut(s) 944, 1322, 1443
TspGWI ACGGA 2 cut(s) 783, 1314
TspRI CASTG 2 cut(s) 1355, 1495
VneI GTGCAC 1 cut(s) 562
VpaK11BI GGWCC 4 cut(s) 352, 439, 1059, 1345
XapI RAATTY 2 cut(s) 47, 104
XceI RCATGY 5 cut(s) 455, 608, 729, 969, 1514
XmiI GTMKAC 2 cut(s) 330, 654
XspI CTAG 1 cut(s) 182
ZrmI AGTACT 3 cut(s) 504, 950, 1176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.