FvH4_6g46030

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000217
Physical Location & Seq
Reverse (-)
35186406 .. 35187998
1593 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g46030.t1

Sequence Viewer

Length: 1593 bp
ATGTCGGTCGTCTATTTGCCACCCACTATCGCTCTGAAATCAAACTGGTTCAACTTGTACTTGAACTACAGCGATGATTCCTATTCCTCGACGCAAGGTTTCGTCAAATTCAACGGATCCAATGTCTTCAGCCCGTTAGCCAAGTTCGAAGTGGTGTCGGCCAATACCGGGACGGGACGAGTACATCTCAGATGCCGGGCGAACAAGAAGTTTCTGCGGAGGAAAGATTCAACTTCTGTATTCATTACTCCGGAGGCAGATGAAGCAGAGGAGGACACAGCCAAATGGGGGTGTACACTGTTTGAGGCTCGAGAAGTTGAAGCTGGCAACACCACCCTAATCAATTTGTTCCATGTCCAATCACAATACTATACAAATGCCTGGGATGTTAGTGGAATCAGGTCCTTGAGATTAAATTCTGTCGGTCCGAATTTTCAGGGTAGGTATAATATCTTAGACCTGGAGTCAATGGTGATATTGCCGAAGCATGTGGCTTTCAAAGGCAAATCCGGCGATTACCTTAGGATGGTGGAGTTTTCAAATTCGTTGCAGCCGACCTTTACATCCACTGACAAGGGGCGTCCGGGGTCGTGGTTCGTGACCTCTACAGATGGTGATGGAAGGGTTCAAATTATGTCGTTCTACAACAACAAATACCTAAGGCACAACAGTGCTGACAACTGGATTCTCGCTGACTCTGCCGGCGATGCCACCGACCTGTCCACCTGGTTTTGGCCAATCAAGCTCAACAGTAGTACTCTCGCTATCAAAAGCTTGAACAACGGCAAATTTGGTCAACAATACACCGCCGGTGGTATAACATACGGTTTCAGAGCAGTCAACCCCACCACTAATGACTGGACTCGCTTCACTCTAGAAGAACTCGTGCTCTCTAGGAGAATCTACAATACTGATTTTGACCTGAAGAACGCCATAATATATGGCGAGACTCCTCTCACCATGGCCAACGGAGACGCCACCAACGACACCTCTGCGGACAACACCTTGGCAATTAAGTTGACGTACAGGGAGAGTAGGAGCAGCACGTGGAAATCCAGCCACTCATGGATGGTTGGCGTCAGTGTCACCACCAGCTTCAAAATTCCGTTCATCGGCGGTACTGATGTCACTGCTACCGCGGAGTATTCCGGATCCTACGAGTGGGGAGAAACTATTACCTCCGAAAATACTGTCGAGACCACCTACACGGCTATAGTGCCGGCATACACTAGAGTACAAGTGAGATTGTTGGCAACCAAGGGAAATTGCGACGTGACTTACTCTTATTATCAGAGAGACCTGCTTTATAACGGCCAAACCGTAATCTATAAGAAAGATGACGGGTTGTACACGGGTGTAAACTCATATAACTTCCATTACGAGGTTACAACTGTGAAAACGGATAGATCTGGAGCTGATTTGGTCGAGACCACAACAGTACGAAAGATACCAGCGCCGGAATTGACTGGACCAACCATTGTGCCAATCCCAGTGACCTCGACCACCAGCCTGCAGTTAGAAGAGGAGATTGTCCAAGAAGCAGTAGCTATGCCATTGGAGGCCAACCAAGAAGGTGAAGAAACCCTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

531

Amino Acids

59.14

Weight (kDa)

5.31

Isoelectric Point (pI)

27.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 6 - 131 2.5e-18 Agglutinin domain
Aerolysin PF01117 308 - 429 4.4e-07 Aerolysin toxin
ETX_MTX2 PF03318 316 - 428 4.2e-07 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1308
Acc36I ACCTGC 1 cut(s) 1308
AccII CGCG 1 cut(s) 1139
AccIII TCCGGA 2 cut(s) 250, 1148
AciI CCGC 6 cut(s) 217, 807, 995, 1116, 1137, 1139
AclWI GGATC 4 cut(s) 111, 124, 1146, 1159
AcoI YGGCCR 4 cut(s) 159, 734, 963, 1312
AcsI RAATTY 6 cut(s) 107, 415, 430, 541, 788, 1101
AcuI CTGAAG 2 cut(s) 112, 944
AcvI CACGTG 1 cut(s) 1047
AcyI GRCGYC 3 cut(s) 580, 975, 1077
AfaI GTAC 9 cut(s) 59, 183, 295, 757, 1025, 1120, 1236, 1349, 1440
AfiI CCNNNNNNNGG 7 cut(s) 168, 288, 526, 732, 1112, 1161, 1381
AhdI GACNNNNNGTC 1 cut(s) 463
AjiI CACGTC 1 cut(s) 1273
AjnI CCWGG 3 cut(s) 380, 459, 725
AleI CACNNNNGTG 1 cut(s) 669
AluBI AGCT 7 cut(s) 323, 745, 774, 1095, 1415, 1547, 1589
AluI AGCT 7 cut(s) 323, 745, 774, 1095, 1415, 1547, 1589
Alw21I GWGCWC 1 cut(s) 891
Alw26I GTCTC 5 cut(s) 941, 966, 1190, 1290, 1421
AlwI GGATC 4 cut(s) 111, 124, 1146, 1159
Ama87I CYCGRG 1 cut(s) 309
Aor13HI TCCGGA 2 cut(s) 250, 1148
AoxI GGCC 5 cut(s) 159, 734, 963, 1312, 1560
ApeKI GCWGC 2 cut(s) 550, 1041
ApoI RAATTY 6 cut(s) 107, 415, 430, 541, 788, 1101
ArsI GACNNNNNNTTYG 2 cut(s) 1176, 1208
AspLEI GCGC 1 cut(s) 1456
AspS9I GGNCC 3 cut(s) 402, 425, 1469
AsuC2I CCSGG 3 cut(s) 169, 197, 585
AsuHPI GGTGA 5 cut(s) 484, 626, 949, 1078, 1586
AsuII TTCGAA 1 cut(s) 147
AvaI CYCGRG 1 cut(s) 309
AvaII GGWCC 3 cut(s) 402, 425, 1469
AxyI CCTNAGG 2 cut(s) 521, 659
BaeI ACNNNNGTAYC 2 cut(s) 1110, 1143
BalI TGGCCA 2 cut(s) 736, 965
BamHI GGATCC 2 cut(s) 116, 1151
BauI CACGAG 1 cut(s) 884
BbrPI CACGTG 1 cut(s) 1047
BbsI GAAGAC 1 cut(s) 118
Bbv12I GWGCWC 1 cut(s) 891
BbvI GCAGC 2 cut(s) 562, 1053
BccI CCATC 4 cut(s) 520, 605, 611, 1063
BceAI ACGGC 3 cut(s) 799, 1224, 1327
BcgI CGANNNNNNTGC 2 cut(s) 974, 1008
BciT130I CCWGG 3 cut(s) 382, 461, 727
BcnI CCSGG 3 cut(s) 169, 197, 585
BcoDI GTCTC 5 cut(s) 941, 966, 1190, 1290, 1421
BfaI CTAG 4 cut(s) 875, 894, 1230, 1586
BfmI CTRYAG 4 cut(s) 67, 606, 1212, 1511
BfoI RGCGCY 1 cut(s) 1457
BfuAI ACCTGC 1 cut(s) 1308
BglII AGATCT 1 cut(s) 1406
BisI GCNGC 2 cut(s) 551, 1042
BlsI GCNGC 2 cut(s) 552, 1043
BmcAI AGTACT 1 cut(s) 757
Bme1390I CCNGG 6 cut(s) 169, 197, 382, 461, 585, 727
Bme18I GGWCC 3 cut(s) 402, 425, 1469
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 309
BmgBI CACGTC 1 cut(s) 1273
BmgT120I GGNCC 3 cut(s) 402, 425, 1469
BmiI GGNNCC 2 cut(s) 118, 1153
BmrFI CCNGG 6 cut(s) 169, 197, 382, 461, 585, 727
BmrI ACTGGG 1 cut(s) 1484
BmsI GCATC 2 cut(s) 182, 697
BmuI ACTGGG 1 cut(s) 1484
BpiI GAAGAC 1 cut(s) 118
BplI GAGNNNNNCTC 2 cut(s) 171, 203
BpmI CTGGAG 2 cut(s) 482, 1431
Bpu14I TTCGAA 1 cut(s) 147
BpuEI CTTGAG 1 cut(s) 427
BpuMI CCSGG 3 cut(s) 169, 197, 585
BsaAI YACGTR 1 cut(s) 1047
BsaHI GRCGYC 3 cut(s) 580, 975, 1077
BsaI GGTCTC 3 cut(s) 1190, 1290, 1421
BsaJI CCNNGG 6 cut(s) 381, 584, 960, 1005, 1137, 1257
BsaWI WCCGGW 2 cut(s) 250, 1148
Bsc4I CCNNNNNNNGG 7 cut(s) 168, 288, 526, 732, 1112, 1161, 1381
Bse118I RCCGGY 3 cut(s) 701, 809, 1219
Bse1I ACTGG 5 cut(s) 50, 686, 863, 1471, 1490
Bse21I CCTNAGG 2 cut(s) 521, 659
BseAI TCCGGA 2 cut(s) 250, 1148
BseBI CCWGG 3 cut(s) 382, 461, 727
BseDI CCNNGG 6 cut(s) 381, 584, 960, 1005, 1137, 1257
BseGI GGATG 4 cut(s) 391, 531, 563, 1074
BseLI CCNNNNNNNGG 7 cut(s) 168, 288, 526, 732, 1112, 1161, 1381
BseMII CTCAG 1 cut(s) 202
BseNI ACTGG 5 cut(s) 50, 686, 863, 1471, 1490
BseRI GAGGAG 3 cut(s) 284, 942, 1538
BseXI GCAGC 2 cut(s) 562, 1053
Bsh1236I CGCG 1 cut(s) 1139
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 5 cut(s) 161, 736, 965, 1314, 1562
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 891
BsiHKCI CYCGRG 1 cut(s) 309
BslFI GGGAC 2 cut(s) 184, 189
BslI CCNNNNNNNGG 7 cut(s) 168, 288, 526, 732, 1112, 1161, 1381
BsmAI GTCTC 5 cut(s) 941, 966, 1190, 1290, 1421
BsmBI CGTCTC 1 cut(s) 966
BsmFI GGGAC 2 cut(s) 184, 189
BsnI GGCC 5 cut(s) 161, 736, 965, 1314, 1562
Bso31I GGTCTC 3 cut(s) 1190, 1290, 1421
BsoBI CYCGRG 1 cut(s) 309
Bsp119I TTCGAA 1 cut(s) 147
Bsp1286I GDGCHC 1 cut(s) 891
Bsp13I TCCGGA 2 cut(s) 250, 1148
Bsp1407I TGTACA 2 cut(s) 293, 1347
Bsp143I GATC 3 cut(s) 116, 1151, 1406
Bsp19I CCATGG 1 cut(s) 960
BspACI CCGC 6 cut(s) 217, 807, 995, 1116, 1137, 1139
BspANI GGCC 5 cut(s) 161, 736, 965, 1314, 1562
BspCNI CTCAG 1 cut(s) 201
BspEI TCCGGA 2 cut(s) 250, 1148
BspFNI CGCG 1 cut(s) 1139
BspLI GGNNCC 2 cut(s) 118, 1153
BspMAI CTGCAG 1 cut(s) 1515
BspMI ACCTGC 1 cut(s) 1308
BspPI GGATC 4 cut(s) 111, 124, 1146, 1159
BspT104I TTCGAA 1 cut(s) 147
BspTNI GGTCTC 3 cut(s) 1190, 1290, 1421
BsrFI RCCGGY 3 cut(s) 701, 809, 1219
BsrGI TGTACA 2 cut(s) 293, 1347
BsrI ACTGG 5 cut(s) 50, 686, 863, 1471, 1490
BssAI RCCGGY 3 cut(s) 701, 809, 1219
BssECI CCNNGG 6 cut(s) 381, 584, 960, 1005, 1137, 1257
BssMI GATC 3 cut(s) 116, 1151, 1406
BssNI GRCGYC 3 cut(s) 580, 975, 1077
BssSI CACGAG 1 cut(s) 884
BssT1I CCWWGG 3 cut(s) 960, 1005, 1257
Bst2BI CACGAG 1 cut(s) 884
Bst2UI CCWGG 3 cut(s) 382, 461, 727
Bst4CI ACNGT 8 cut(s) 300, 671, 752, 827, 1192, 1321, 1393, 1438
Bst6I CTCTTC 1 cut(s) 1515
BstACI GRCGYC 3 cut(s) 580, 975, 1077
BstAUI TGTACA 2 cut(s) 293, 1347
BstBAI YACGTR 1 cut(s) 1047
BstBI TTCGAA 1 cut(s) 147
BstC8I GCNNGC 4 cut(s) 325, 703, 1221, 1511
BstDEI CTNAG 4 cut(s) 188, 454, 521, 659
BstDSI CCRYGG 2 cut(s) 960, 1137
BstF5I GGATG 4 cut(s) 391, 531, 563, 1074
BstFNI CGCG 1 cut(s) 1139
BstH2I RGCGCY 1 cut(s) 1457
BstHHI GCGC 1 cut(s) 1456
BstKTI GATC 3 cut(s) 119, 1154, 1409
BstMAI GTCTC 5 cut(s) 941, 966, 1190, 1290, 1421
BstMBI GATC 3 cut(s) 116, 1151, 1406
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 5 cut(s) 263, 510, 698, 707, 742
BstNI CCWGG 3 cut(s) 382, 461, 727
BstNSI RCATGY 1 cut(s) 491
BstSCI CCNGG 6 cut(s) 167, 195, 380, 459, 583, 725
BstSFI CTRYAG 4 cut(s) 67, 606, 1212, 1511
BstUI CGCG 1 cut(s) 1139
BstV1I GCAGC 2 cut(s) 562, 1053
BstV2I GAAGAC 1 cut(s) 118
BstX2I RGATCY 3 cut(s) 116, 1151, 1406
BstYI RGATCY 3 cut(s) 116, 1151, 1406
Bsu36I CCTNAGG 2 cut(s) 521, 659
BsuRI GGCC 5 cut(s) 161, 736, 965, 1314, 1562
BtgI CCRYGG 2 cut(s) 960, 1137
BtgZI GCGATG 2 cut(s) 87, 720
BtrI CACGTC 1 cut(s) 1273
BtsCI GGATG 4 cut(s) 391, 531, 563, 1074
BtsI GCAGTG 1 cut(s) 1128
BtsIMutI CAGTG 6 cut(s) 296, 567, 676, 1087, 1128, 1497
BveI ACCTGC 1 cut(s) 1308
Cac8I GCNNGC 4 cut(s) 325, 703, 1221, 1511
CfoI GCGC 1 cut(s) 1456
Cfr10I RCCGGY 3 cut(s) 701, 809, 1219
Cfr13I GGNCC 3 cut(s) 402, 425, 1469
Cfr42I CCGCGG 1 cut(s) 1140
CpoI CGGWCCG 1 cut(s) 425
CseI GACGC 4 cut(s) 100, 569, 983, 1066
CsiI ACCWGGT 1 cut(s) 725
Csp6I GTAC 9 cut(s) 58, 182, 294, 756, 1024, 1119, 1235, 1348, 1439
CspI CGGWCCG 1 cut(s) 425
CviAII CATG 4 cut(s) 353, 488, 961, 1065
CviQI GTAC 9 cut(s) 58, 182, 294, 756, 1024, 1119, 1235, 1348, 1439
DdeI CTNAG 4 cut(s) 188, 454, 521, 659
DpnI GATC 3 cut(s) 118, 1153, 1408
DpnII GATC 3 cut(s) 116, 1151, 1406
DriI GACNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 4 cut(s) 159, 734, 963, 1312
Eam1104I CTCTTC 1 cut(s) 1515
Eam1105I GACNNNNNGTC 1 cut(s) 463
EarI CTCTTC 1 cut(s) 1515
Eco130I CCWWGG 3 cut(s) 960, 1005, 1257
Eco31I GGTCTC 3 cut(s) 1190, 1290, 1421
Eco47I GGWCC 3 cut(s) 402, 425, 1469
Eco57I CTGAAG 2 cut(s) 112, 944
Eco72I CACGTG 1 cut(s) 1047
Eco81I CCTNAGG 2 cut(s) 521, 659
Eco88I CYCGRG 1 cut(s) 309
EcoO109I RGGNCCY 1 cut(s) 402
EcoRII CCWGG 3 cut(s) 380, 459, 725
EcoT14I CCWWGG 3 cut(s) 960, 1005, 1257
ErhI CCWWGG 3 cut(s) 960, 1005, 1257
Esp3I CGTCTC 1 cut(s) 966
FaeI CATG 4 cut(s) 356, 491, 964, 1068
FaqI GGGAC 2 cut(s) 184, 189
FatI CATG 4 cut(s) 352, 487, 960, 1064
Fnu4HI GCNGC 2 cut(s) 551, 1042
FokI GGATG 4 cut(s) 398, 538, 550, 1081
Fsp4HI GCNGC 2 cut(s) 551, 1042
FspBI CTAG 4 cut(s) 875, 894, 1230, 1586
GlaI GCGC 1 cut(s) 1455
GluI GCNGC 2 cut(s) 551, 1042
GsuI CTGGAG 2 cut(s) 482, 1431
HaeII RGCGCY 1 cut(s) 1457
HaeIII GGCC 5 cut(s) 161, 736, 965, 1314, 1562
HgaI GACGC 4 cut(s) 100, 569, 983, 1066
HhaI GCGC 1 cut(s) 1456
Hin1I GRCGYC 3 cut(s) 580, 975, 1077
Hin1II CATG 4 cut(s) 356, 491, 964, 1068
Hin6I GCGC 1 cut(s) 1454
HinP1I GCGC 1 cut(s) 1454
HincII GTYRAC 3 cut(s) 797, 841, 1020
HindII GTYRAC 3 cut(s) 797, 841, 1020
HindIII AAGCTT 1 cut(s) 772
HinfI GANTC 9 cut(s) 77, 227, 396, 464, 685, 695, 862, 900, 949
HphI GGTGA 5 cut(s) 484, 626, 949, 1078, 1586
Hpy166II GTNNAC 8 cut(s) 294, 296, 723, 797, 841, 1020, 1350, 1360
Hpy188I TCNGA 6 cut(s) 36, 191, 429, 833, 1183, 1293
Hpy188III TCNNGA 8 cut(s) 251, 311, 598, 875, 1149, 1195, 1410, 1426
Hpy8I GTNNAC 8 cut(s) 294, 296, 723, 797, 841, 1020, 1350, 1360
Hpy99I CGWCG 2 cut(s) 94, 1274
HpyAV CCTTC 2 cut(s) 615, 1565
HpyCH4III ACNGT 8 cut(s) 300, 671, 752, 827, 1192, 1321, 1393, 1438
HpyCH4IV ACGT 3 cut(s) 1022, 1046, 1272
HpyCH4V TGCA 2 cut(s) 550, 1513
HpyF10VI GCNNNNNNNGC 5 cut(s) 263, 510, 698, 707, 742
HpyF3I CTNAG 4 cut(s) 188, 454, 521, 659
HpySE526I ACGT 3 cut(s) 1022, 1046, 1272
Hsp92I GRCGYC 3 cut(s) 580, 975, 1077
Hsp92II CATG 4 cut(s) 356, 491, 964, 1068
HspAI GCGC 1 cut(s) 1454
Kpn2I TCCGGA 2 cut(s) 250, 1148
KroI GCCGGC 2 cut(s) 701, 1219
KroNI GCCGGC 2 cut(s) 703, 1221
KspI CCGCGG 1 cut(s) 1140
Kzo9I GATC 3 cut(s) 116, 1151, 1406
LmnI GCTCC 2 cut(s) 1038, 1412
Lsp1109I GCAGC 2 cut(s) 562, 1053
LweI GCATC 2 cut(s) 182, 697
MabI ACCWGGT 1 cut(s) 725
MaeI CTAG 4 cut(s) 875, 894, 1230, 1586
MaeII ACGT 3 cut(s) 1022, 1046, 1272
MaeIII GTNAC 6 cut(s) 598, 1084, 1126, 1273, 1384, 1492
MalI GATC 3 cut(s) 118, 1153, 1408
MboI GATC 3 cut(s) 116, 1151, 1406
MboII GAAGA 5 cut(s) 118, 890, 937, 1532, 1589
MflI RGATCY 3 cut(s) 116, 1151, 1406
MhlI GDGCHC 1 cut(s) 891
MlsI TGGCCA 2 cut(s) 736, 965
MluNI TGGCCA 2 cut(s) 736, 965
MlyI GAGTC 4 cut(s) 473, 689, 856, 943
Mox20I TGGCCA 2 cut(s) 736, 965
MroI TCCGGA 2 cut(s) 250, 1148
MroNI GCCGGC 2 cut(s) 701, 1219
MscI TGGCCA 2 cut(s) 736, 965
MseI TTAA 2 cut(s) 413, 1014
MslI CAYNNNNRTG 1 cut(s) 669
Msp20I TGGCCA 2 cut(s) 736, 965
MspA1I CMGCKG 1 cut(s) 1139
MspR9I CCNGG 6 cut(s) 169, 197, 382, 461, 585, 727
MvaI CCWGG 3 cut(s) 382, 461, 727
MvnI CGCG 1 cut(s) 1139
MwoI GCNNNNNNNGC 5 cut(s) 263, 510, 698, 707, 742
NaeI GCCGGC 2 cut(s) 703, 1221
NciI CCSGG 3 cut(s) 169, 197, 585
NcoI CCATGG 1 cut(s) 960
NdeII GATC 3 cut(s) 116, 1151, 1406
NgoMIV GCCGGC 2 cut(s) 701, 1219
NlaIII CATG 4 cut(s) 356, 491, 964, 1068
NlaIV GGNNCC 2 cut(s) 118, 1153
NmuCI GTSAC 5 cut(s) 598, 1084, 1126, 1273, 1492
NspI RCATGY 1 cut(s) 491
NspV TTCGAA 1 cut(s) 147
OliI CACNNNNGTG 1 cut(s) 669
PaeR7I CTCGAG 1 cut(s) 309
PcsI WCGNNNNNNNCGW 3 cut(s) 551, 981, 1317
PdiI GCCGGC 2 cut(s) 703, 1221
PfeI GAWTC 5 cut(s) 77, 227, 396, 685, 900
PkrI GCNGC 2 cut(s) 552, 1043
PleI GAGTC 4 cut(s) 472, 689, 856, 943
PmaCI CACGTG 1 cut(s) 1047
PmlI CACGTG 1 cut(s) 1047
PpsI GAGTC 4 cut(s) 472, 689, 856, 943
Ppu21I YACGTR 1 cut(s) 1047
PpuMI RGGWCCY 1 cut(s) 402
PsiI TTATAA 1 cut(s) 1308
Psp5II RGGWCCY 1 cut(s) 402
Psp6I CCWGG 3 cut(s) 380, 459, 725
PspCI CACGTG 1 cut(s) 1047
PspGI CCWGG 3 cut(s) 380, 459, 725
PspN4I GGNNCC 2 cut(s) 118, 1153
PspPI GGNCC 3 cut(s) 402, 425, 1469
PspPPI RGGWCCY 1 cut(s) 402
PstI CTGCAG 1 cut(s) 1515
PsuI RGATCY 3 cut(s) 116, 1151, 1406
RsaI GTAC 9 cut(s) 59, 183, 295, 757, 1025, 1120, 1236, 1349, 1440
RsaNI GTAC 9 cut(s) 58, 182, 294, 756, 1024, 1119, 1235, 1348, 1439
RseI CAYNNNNRTG 1 cut(s) 669
Rsr2I CGGWCCG 1 cut(s) 425
RsrII CGGWCCG 1 cut(s) 425
SacII CCGCGG 1 cut(s) 1140
SaqAI TTAA 2 cut(s) 413, 1014
SatI GCNGC 2 cut(s) 551, 1042
Sau3AI GATC 3 cut(s) 116, 1151, 1406
Sau96I GGNCC 3 cut(s) 402, 425, 1469
ScaI AGTACT 1 cut(s) 757
SchI GAGTC 4 cut(s) 473, 689, 856, 943
ScrFI CCNGG 6 cut(s) 169, 197, 382, 461, 585, 727
SduI GDGCHC 1 cut(s) 891
SexAI ACCWGGT 1 cut(s) 725
SfaNI GCATC 2 cut(s) 182, 697
SfcI CTRYAG 4 cut(s) 67, 606, 1212, 1511
Sfr274I CTCGAG 1 cut(s) 309
Sfr303I CCGCGG 1 cut(s) 1140
SfuI TTCGAA 1 cut(s) 147
SgrAI CRCCGGYG 1 cut(s) 809
SgrBI CCGCGG 1 cut(s) 1140
SinI GGWCC 3 cut(s) 402, 425, 1469
SlaI CTCGAG 1 cut(s) 309
SmiMI CAYNNNNRTG 1 cut(s) 669
SmlI CTYRAG 2 cut(s) 309, 406
SmoI CTYRAG 2 cut(s) 309, 406
SsiI CCGC 6 cut(s) 217, 807, 995, 1116, 1137, 1139
SspMI CTAG 4 cut(s) 875, 894, 1230, 1586
StyD4I CCNGG 6 cut(s) 167, 195, 380, 459, 583, 725
StyI CCWWGG 3 cut(s) 960, 1005, 1257
TaaI ACNGT 8 cut(s) 300, 671, 752, 827, 1192, 1321, 1393, 1438
TaiI ACGT 3 cut(s) 1025, 1049, 1275
TaqI TCGA 6 cut(s) 89, 147, 310, 1194, 1425, 1499
TaqII GACCGA 1 cut(s) 413
TatI WGTACW 6 cut(s) 57, 181, 293, 755, 1234, 1347
TfiI GAWTC 5 cut(s) 77, 227, 396, 685, 900
Tru1I TTAA 2 cut(s) 413, 1014
Tru9I TTAA 2 cut(s) 413, 1014
TscAI CASTG 6 cut(s) 303, 574, 676, 1087, 1135, 1497
TseFI GTSAC 5 cut(s) 598, 1084, 1126, 1273, 1492
TseI GCWGC 2 cut(s) 550, 1041
Tsp45I GTSAC 5 cut(s) 598, 1084, 1126, 1273, 1492
TspDTI ATGAA 3 cut(s) 232, 276, 1099
TspGWI ACGGA 4 cut(s) 129, 984, 1095, 1415
TspRI CASTG 6 cut(s) 303, 574, 676, 1087, 1135, 1497
VpaK11BI GGWCC 3 cut(s) 402, 425, 1469
XapI RAATTY 6 cut(s) 107, 415, 430, 541, 788, 1101
XbaI TCTAGA 1 cut(s) 874
XceI RCATGY 1 cut(s) 491
XcmI CCANNNNNNNNNTGG 1 cut(s) 148
XhoI CTCGAG 1 cut(s) 309
XspI CTAG 4 cut(s) 875, 894, 1230, 1586
ZrmI AGTACT 1 cut(s) 757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.