Agglutinin domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Agglutinin | PF07468 | 5 - 136 | 9.1e-16 | Agglutinin domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 752 |
| AccI | GTMKAC | 1 cut(s) | 735 |
| AccII | CGCG | 1 cut(s) | 828 |
| AccIII | TCCGGA | 1 cut(s) | 247 |
| AciI | CCGC | 3 cut(s) | 654, 746, 750 |
| AclWI | GGATC | 1 cut(s) | 121 |
| AcoI | YGGCCR | 1 cut(s) | 747 |
| AcsI | RAATTY | 1 cut(s) | 776 |
| AcuI | CTGAAG | 2 cut(s) | 109, 500 |
| AfaI | GTAC | 2 cut(s) | 56, 239 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 165, 561, 645 |
| AgsI | TTSAA | 3 cut(s) | 49, 406, 493 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 457 |
| AhlI | ACTAGT | 2 cut(s) | 175, 740 |
| AluBI | AGCT | 4 cut(s) | 129, 314, 520, 538 |
| AluI | AGCT | 4 cut(s) | 129, 314, 520, 538 |
| Alw21I | GWGCWC | 2 cut(s) | 194, 293 |
| Alw44I | GTGCAC | 1 cut(s) | 289 |
| AlwI | GGATC | 1 cut(s) | 121 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 672 |
| Aor13HI | TCCGGA | 1 cut(s) | 247 |
| AoxI | GGCC | 3 cut(s) | 486, 747, 817 |
| ApaLI | GTGCAC | 1 cut(s) | 289 |
| ApeKI | GCWGC | 1 cut(s) | 693 |
| ApoI | RAATTY | 1 cut(s) | 776 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 122 |
| AspLEI | GCGC | 3 cut(s) | 698, 785, 830 |
| AspS9I | GGNCC | 1 cut(s) | 818 |
| AsuC2I | CCSGG | 1 cut(s) | 340 |
| AsuHPI | GGTGA | 4 cut(s) | 163, 242, 478, 622 |
| AsuII | TTCGAA | 2 cut(s) | 144, 582 |
| AxyI | CCTNAGG | 1 cut(s) | 644 |
| BaeGI | GKGCMC | 1 cut(s) | 293 |
| BbsI | GAAGAC | 1 cut(s) | 115 |
| Bbv12I | GWGCWC | 2 cut(s) | 194, 293 |
| BbvI | GCAGC | 1 cut(s) | 705 |
| BccI | CCATC | 4 cut(s) | 314, 380, 590, 596 |
| BceAI | ACGGC | 1 cut(s) | 832 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 725, 759 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BcnI | CCSGG | 1 cut(s) | 340 |
| BcuI | ACTAGT | 2 cut(s) | 175, 740 |
| BfaI | CTAG | 2 cut(s) | 176, 741 |
| BfmI | CTRYAG | 3 cut(s) | 64, 315, 664 |
| BfoI | RGCGCY | 1 cut(s) | 699 |
| BisI | GCNGC | 4 cut(s) | 655, 694, 747, 750 |
| BlsI | GCNGC | 4 cut(s) | 656, 695, 748, 751 |
| Bme1390I | CCNGG | 1 cut(s) | 340 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 457 |
| BmgT120I | GGNCC | 1 cut(s) | 818 |
| BmrFI | CCNGG | 1 cut(s) | 340 |
| BmrI | ACTGGG | 1 cut(s) | 174 |
| BmuI | ACTGGG | 1 cut(s) | 174 |
| BpiI | GAAGAC | 1 cut(s) | 115 |
| Bpu10I | CCTNAGC | 1 cut(s) | 539 |
| Bpu14I | TTCGAA | 2 cut(s) | 144, 582 |
| BpuEI | CTTGAG | 1 cut(s) | 291 |
| BpuMI | CCSGG | 1 cut(s) | 340 |
| BsaAI | YACGTR | 1 cut(s) | 58 |
| BsaWI | WCCGGW | 1 cut(s) | 247 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 165, 561, 645 |
| Bse1I | ACTGG | 4 cut(s) | 52, 169, 458, 677 |
| Bse21I | CCTNAGG | 1 cut(s) | 644 |
| Bse3DI | GCAATG | 1 cut(s) | 76 |
| BseAI | TCCGGA | 1 cut(s) | 247 |
| BseGI | GGATG | 1 cut(s) | 38 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 165, 561, 645 |
| BseMI | GCAATG | 1 cut(s) | 76 |
| BseMII | CTCAG | 2 cut(s) | 553, 635 |
| BseNI | ACTGG | 4 cut(s) | 52, 169, 458, 677 |
| BseRI | GAGGAG | 2 cut(s) | 281, 284 |
| BseSI | GKGCMC | 1 cut(s) | 293 |
| BseX3I | CGGCCG | 1 cut(s) | 747 |
| BseXI | GCAGC | 1 cut(s) | 705 |
| Bsh1236I | CGCG | 1 cut(s) | 828 |
| Bsh1285I | CGRYCG | 1 cut(s) | 750 |
| BshFI | GGCC | 3 cut(s) | 488, 749, 819 |
| BsiEI | CGRYCG | 1 cut(s) | 750 |
| BsiHKAI | GWGCWC | 2 cut(s) | 194, 293 |
| BsiSI | CCGG | 2 cut(s) | 248, 340 |
| BslFI | GGGAC | 2 cut(s) | 181, 186 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 165, 561, 645 |
| BsmFI | GGGAC | 2 cut(s) | 181, 186 |
| BsnI | GGCC | 3 cut(s) | 488, 749, 819 |
| Bsp119I | TTCGAA | 2 cut(s) | 144, 582 |
| Bsp1286I | GDGCHC | 2 cut(s) | 194, 293 |
| Bsp13I | TCCGGA | 1 cut(s) | 247 |
| Bsp143I | GATC | 2 cut(s) | 113, 427 |
| BspACI | CCGC | 3 cut(s) | 654, 746, 750 |
| BspANI | GGCC | 3 cut(s) | 488, 749, 819 |
| BspCNI | CTCAG | 2 cut(s) | 552, 636 |
| BspEI | TCCGGA | 1 cut(s) | 247 |
| BspFNI | CGCG | 1 cut(s) | 828 |
| BspPI | GGATC | 1 cut(s) | 121 |
| BspT104I | TTCGAA | 2 cut(s) | 144, 582 |
| BsrBI | CCGCTC | 1 cut(s) | 752 |
| BsrDI | GCAATG | 1 cut(s) | 76 |
| BsrI | ACTGG | 4 cut(s) | 52, 169, 458, 677 |
| BssMI | GATC | 2 cut(s) | 113, 427 |
| Bst4CI | ACNGT | 1 cut(s) | 376 |
| BstBAI | YACGTR | 1 cut(s) | 58 |
| BstBI | TTCGAA | 2 cut(s) | 144, 582 |
| BstC8I | GCNNGC | 1 cut(s) | 499 |
| BstDEI | CTNAG | 2 cut(s) | 539, 644 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 643 |
| BstF5I | GGATG | 1 cut(s) | 38 |
| BstFNI | CGCG | 1 cut(s) | 828 |
| BstH2I | RGCGCY | 1 cut(s) | 699 |
| BstHHI | GCGC | 3 cut(s) | 698, 785, 830 |
| BstKTI | GATC | 2 cut(s) | 116, 430 |
| BstMBI | GATC | 2 cut(s) | 113, 427 |
| BstMCI | CGRYCG | 1 cut(s) | 750 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 311, 494, 825 |
| BstNSI | RCATGY | 1 cut(s) | 485 |
| BstSCI | CCNGG | 1 cut(s) | 338 |
| BstSFI | CTRYAG | 3 cut(s) | 64, 315, 664 |
| BstSLI | GKGCMC | 1 cut(s) | 293 |
| BstUI | CGCG | 1 cut(s) | 828 |
| BstV1I | GCAGC | 1 cut(s) | 705 |
| BstV2I | GAAGAC | 1 cut(s) | 115 |
| BstZI | CGGCCG | 1 cut(s) | 747 |
| Bsu36I | CCTNAGG | 1 cut(s) | 644 |
| BsuRI | GGCC | 3 cut(s) | 488, 749, 819 |
| BtgZI | GCGATG | 1 cut(s) | 615 |
| BtsCI | GGATG | 1 cut(s) | 38 |
| BtsI | GCAGTG | 1 cut(s) | 664 |
| BtsIMutI | CAGTG | 2 cut(s) | 447, 664 |
| Cac8I | GCNNGC | 1 cut(s) | 499 |
| CaiI | CAGNNNCTG | 1 cut(s) | 672 |
| CciNI | GCGGCCGC | 1 cut(s) | 747 |
| CfoI | GCGC | 3 cut(s) | 698, 785, 830 |
| Cfr13I | GGNCC | 1 cut(s) | 818 |
| Csp6I | GTAC | 2 cut(s) | 55, 238 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 465, 500 |
| CviAII | CATG | 3 cut(s) | 92, 350, 482 |
| CviQI | GTAC | 2 cut(s) | 55, 238 |
| DdeI | CTNAG | 2 cut(s) | 539, 644 |
| DpnI | GATC | 2 cut(s) | 115, 429 |
| DpnII | GATC | 2 cut(s) | 113, 427 |
| DriI | GACNNNNNGTC | 1 cut(s) | 457 |
| EaeI | YGGCCR | 1 cut(s) | 747 |
| EagI | CGGCCG | 1 cut(s) | 747 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 457 |
| EclXI | CGGCCG | 1 cut(s) | 747 |
| Eco32I | GATATC | 1 cut(s) | 445 |
| Eco52I | CGGCCG | 1 cut(s) | 747 |
| Eco57I | CTGAAG | 2 cut(s) | 109, 500 |
| Eco81I | CCTNAGG | 1 cut(s) | 644 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 643 |
| EcoRV | GATATC | 1 cut(s) | 445 |
| FaeI | CATG | 3 cut(s) | 95, 353, 485 |
| FaiI | YATR | 9 cut(s) | 93, 183, 185, 351, 369, 483, 798, 804, 810 |
| FaqI | GGGAC | 2 cut(s) | 181, 186 |
| FatI | CATG | 3 cut(s) | 91, 349, 481 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| FblI | GTMKAC | 1 cut(s) | 735 |
| Fnu4HI | GCNGC | 4 cut(s) | 655, 694, 747, 750 |
| FokI | GGATG | 1 cut(s) | 25 |
| Fsp4HI | GCNGC | 4 cut(s) | 655, 694, 747, 750 |
| FspBI | CTAG | 2 cut(s) | 176, 741 |
| GlaI | GCGC | 3 cut(s) | 697, 784, 829 |
| GluI | GCNGC | 4 cut(s) | 655, 694, 747, 750 |
| HaeII | RGCGCY | 1 cut(s) | 699 |
| HaeIII | GGCC | 3 cut(s) | 488, 749, 819 |
| HapII | CCGG | 2 cut(s) | 248, 340 |
| HhaI | GCGC | 3 cut(s) | 698, 785, 830 |
| Hin1II | CATG | 3 cut(s) | 95, 353, 485 |
| Hin6I | GCGC | 3 cut(s) | 696, 783, 828 |
| HinP1I | GCGC | 3 cut(s) | 696, 783, 828 |
| HincII | GTYRAC | 2 cut(s) | 109, 736 |
| HindII | GTYRAC | 2 cut(s) | 109, 736 |
| HinfI | GANTC | 3 cut(s) | 74, 80, 565 |
| HpaII | CCGG | 2 cut(s) | 248, 340 |
| HphI | GGTGA | 4 cut(s) | 163, 242, 478, 622 |
| Hpy166II | GTNNAC | 7 cut(s) | 61, 109, 238, 291, 552, 591, 736 |
| Hpy188I | TCNGA | 4 cut(s) | 33, 79, 85, 423 |
| Hpy188III | TCNNGA | 1 cut(s) | 248 |
| Hpy8I | GTNNAC | 7 cut(s) | 61, 109, 238, 291, 552, 591, 736 |
| HpyAV | CCTTC | 3 cut(s) | 410, 499, 524 |
| HpyCH4III | ACNGT | 1 cut(s) | 376 |
| HpyCH4IV | ACGT | 2 cut(s) | 57, 240 |
| HpyCH4V | TGCA | 2 cut(s) | 291, 371 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 311, 494, 825 |
| HpyF3I | CTNAG | 2 cut(s) | 539, 644 |
| HpySE526I | ACGT | 2 cut(s) | 57, 240 |
| Hsp92II | CATG | 3 cut(s) | 95, 353, 485 |
| HspAI | GCGC | 3 cut(s) | 696, 783, 828 |
| Kpn2I | TCCGGA | 1 cut(s) | 247 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 2 cut(s) | 113, 427 |
| LmnI | GCTCC | 2 cut(s) | 197, 271 |
| Lsp1109I | GCAGC | 1 cut(s) | 705 |
| MaeI | CTAG | 2 cut(s) | 176, 741 |
| MaeII | ACGT | 2 cut(s) | 57, 240 |
| MaeIII | GTNAC | 2 cut(s) | 151, 659 |
| MalI | GATC | 2 cut(s) | 115, 429 |
| MbiI | CCGCTC | 1 cut(s) | 752 |
| MboI | GATC | 2 cut(s) | 113, 427 |
| MboII | GAAGA | 3 cut(s) | 115, 394, 430 |
| MhlI | GDGCHC | 2 cut(s) | 194, 293 |
| MluCI | AATT | 4 cut(s) | 222, 407, 634, 776 |
| MnlI | CCTC | 9 cut(s) | 220, 244, 259, 262, 295, 639, 683, 709, 717 |
| MroI | TCCGGA | 1 cut(s) | 247 |
| MroXI | GAANNNNTTC | 1 cut(s) | 122 |
| MslI | CAYNNNNRTG | 1 cut(s) | 795 |
| MspI | CCGG | 2 cut(s) | 248, 340 |
| MspR9I | CCNGG | 1 cut(s) | 340 |
| MvnI | CGCG | 1 cut(s) | 828 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 311, 494, 825 |
| NciI | CCSGG | 1 cut(s) | 340 |
| NdeII | GATC | 2 cut(s) | 113, 427 |
| NlaIII | CATG | 3 cut(s) | 95, 353, 485 |
| NmuCI | GTSAC | 2 cut(s) | 151, 659 |
| NotI | GCGGCCGC | 1 cut(s) | 747 |
| NspI | RCATGY | 1 cut(s) | 485 |
| NspV | TTCGAA | 2 cut(s) | 144, 582 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 552 |
| PdmI | GAANNNNTTC | 1 cut(s) | 122 |
| PfeI | GAWTC | 3 cut(s) | 74, 80, 565 |
| PkrI | GCNGC | 4 cut(s) | 656, 695, 748, 751 |
| Ppu21I | YACGTR | 1 cut(s) | 58 |
| PspPI | GGNCC | 1 cut(s) | 818 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 623, 655 |
| PstNI | CAGNNNCTG | 1 cut(s) | 672 |
| RsaI | GTAC | 2 cut(s) | 56, 239 |
| RsaNI | GTAC | 2 cut(s) | 55, 238 |
| RseI | CAYNNNNRTG | 1 cut(s) | 795 |
| SalI | GTCGAC | 1 cut(s) | 734 |
| SatI | GCNGC | 4 cut(s) | 655, 694, 747, 750 |
| Sau3AI | GATC | 2 cut(s) | 113, 427 |
| Sau96I | GGNCC | 1 cut(s) | 818 |
| ScrFI | CCNGG | 1 cut(s) | 340 |
| SduI | GDGCHC | 2 cut(s) | 194, 293 |
| SfcI | CTRYAG | 3 cut(s) | 64, 315, 664 |
| SfuI | TTCGAA | 2 cut(s) | 144, 582 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 795 |
| SmlI | CTYRAG | 1 cut(s) | 306 |
| SmoI | CTYRAG | 1 cut(s) | 306 |
| SpeI | ACTAGT | 2 cut(s) | 175, 740 |
| Sse9I | AATT | 4 cut(s) | 222, 407, 634, 776 |
| SsiI | CCGC | 3 cut(s) | 654, 746, 750 |
| SspMI | CTAG | 2 cut(s) | 176, 741 |
| StyD4I | CCNGG | 1 cut(s) | 338 |
| TaaI | ACNGT | 1 cut(s) | 376 |
| TaiI | ACGT | 2 cut(s) | 60, 243 |
| TaqI | TCGA | 6 cut(s) | 116, 144, 441, 582, 701, 735 |
| TasI | AATT | 4 cut(s) | 222, 407, 634, 776 |
| TauI | GCSGC | 3 cut(s) | 657, 749, 752 |
| TfiI | GAWTC | 3 cut(s) | 74, 80, 565 |
| TscAI | CASTG | 2 cut(s) | 454, 664 |
| TseFI | GTSAC | 2 cut(s) | 151, 659 |
| TseI | GCWGC | 1 cut(s) | 693 |
| Tsp45I | GTSAC | 2 cut(s) | 151, 659 |
| TspDTI | ATGAA | 2 cut(s) | 273, 429 |
| TspGWI | ACGGA | 2 cut(s) | 126, 702 |
| TspRI | CASTG | 2 cut(s) | 454, 664 |
| VneI | GTGCAC | 1 cut(s) | 289 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 643 |
| XapI | RAATTY | 1 cut(s) | 776 |
| XceI | RCATGY | 1 cut(s) | 485 |
| XmiI | GTMKAC | 1 cut(s) | 735 |
| XmnI | GAANNNNTTC | 1 cut(s) | 122 |
| XspI | CTAG | 2 cut(s) | 176, 741 |