MD07G1171100.v1.1

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000217
Physical Location & Seq
Forward (+)
24677707 .. 24679209
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1171100.v1.1.491

Sequence Viewer

Length: 1503 bp
ATGCCAACATTGCCGAAGTTTGTGGTGCTCAAGTCGAACTACAACAACAAATACTTACGATTCAATACTATAGATGCAGATGAGAATCTGAAGCGAATCATGCCGGCTGCAAGGTATATTAATTTCACAGGAGAGGAAGCAGGGAGCGAACACACAAAATTTGAAGTGGAGAAGGCAAAGAGTATTGGGAATGAGGGACTAGTACACATTAGATGCTGCTACAACAATAAATACTGGGTGATGCCTGCTTGTGGTTATACTCAGATTGTTGCTGGTGCTGATGAACCAGAGGAAGACAAATCCAAGTTCTCATGTACCTTGTTCGAGCCTGTCTACGAAGATGATGATGGCCTCCCAGTTGATGATTCCAGAAGTGCTAATTCTATAGTACTCCGATTCCGCCATGCCCACAATGGAAAGTACTTGGCCTTGGTGCAAAACGATCCGAATGACAAATACTGGGGTTTCATGTACACGTATGGGGAATCTCCTAGCCAGAGGTTTATGGATGTGTTCATAGTCATTGACTGGGAATCGTTGGTGCTAATCAAGATACTTCCCAAGCATGTGGCGTTTAAGGGTGCTAATGGTCACTACCTCGGTGCCCGCCTGATCGACCAATACCCAAGTTTGCTGCAGTTCGAATCCACTGACATTGAAGATCCATCGGCAGGAAACGAGGTCTTCACCAATGCTGATGGCACCGTTCGCATAAAGTCCGATTCCTCAGGAAAATTCTGGAGGCTCACCGAGGATGACTGGATATGCGCCGACTCAGATGACTCTACCAACGACGATTCCCACACATTGTTTTGGCCCATCAAAGTAGGCGACAGTGCCATTGCCCTCCGCAACATGCAGAACAAGAAGTTTTGCAAGAGATTTACCACTAGCACAATTACAAGCGGTCTTAATGCAAACGTCTCCACTATCGACAAAGAGGCATACTTGGAGGTGGAAGAGGTTTTTCCCTTAAGGAGAGATATCAGTAATATTACTCTCCATCTCGACCGTGCAAGGATTTACAACCAAAACGTTGTCAATTTAGCCATGGGTGAACTCGTTAACCATTCTAATGAATCTTACCCTATGGAATTGAAGTTTTCCTATATAGAAACTAGGAACAGTACTTGGAATTACTCCAGTGTCTCGTCGATTTTGAAGTTGTGCGGCCTCAAGAGCAGCACCCACACCGAAGTTCCAGTAATTGCAGATGATAAAAAGTTGACCATTGGATTTACTGGAGCAGTCCAATTTGGAGAAACTGAGACAGTCACAAGTAGTGTAAAGGATGCTTTTTATAAGTATGTTCTGCCAGCAATGACTAAGGTAATGGTGAGGTTTGTAGCAGCTGAGGCTTCATGTGATGTTCCCTTCTCTTACACCCAGCGCGACACTCGTACGAGTGGGGAAATAATTACCAGCAACATAGACGATGGAGTTTATAATGGTGTGAATACCTTTGATTTCAAGTTCGAGTCCACAGAAGAAAAGCTTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

501

Amino Acids

56.57

Weight (kDa)

5.1

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 4 - 116 4.6e-15 Agglutinin domain
Agglutinin PF07468 189 - 316 1.2e-20 Agglutinin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1302, 1446
AccB1I GGYRCC 2 cut(s) 602, 701
AccI GTMKAC 1 cut(s) 333
AccII CGCG 1 cut(s) 1392
AciI CCGC 5 cut(s) 400, 607, 850, 906, 1170
AclI AACGTT 1 cut(s) 1035
AclWI GGATC 2 cut(s) 437, 656
AcsI RAATTY 2 cut(s) 158, 734
AcuI CTGAAG 1 cut(s) 110
AfaI GTAC 7 cut(s) 204, 316, 390, 422, 473, 1129, 1402
AfiI CCNNNNNNNGG 2 cut(s) 251, 671
AflII CTTAAG 1 cut(s) 973
AflIII ACRYGT 1 cut(s) 474
AgsI TTSAA 6 cut(s) 64, 164, 659, 1099, 1162, 1471
AhlI ACTAGT 1 cut(s) 199
AluBI AGCT 2 cut(s) 1352, 1495
AluI AGCT 2 cut(s) 1352, 1495
Alw21I GWGCWC 1 cut(s) 30
Alw26I GTCTC 3 cut(s) 928, 1153, 1262
AlwI GGATC 2 cut(s) 437, 656
AoxI GGCC 4 cut(s) 349, 426, 815, 1171
ApeKI GCWGC 5 cut(s) 107, 216, 634, 1182, 1349
ApoI RAATTY 2 cut(s) 158, 734
AseI ATTAAT 1 cut(s) 120
AspLEI GCGC 2 cut(s) 770, 1392
AspS9I GGNCC 1 cut(s) 816
AsuHPI GGTGA 5 cut(s) 250, 679, 739, 1067, 1348
AsuII TTCGAA 1 cut(s) 642
AxyI CCTNAGG 1 cut(s) 727
BaeGI GKGCMC 1 cut(s) 607
BanI GGYRCC 2 cut(s) 602, 701
BbsI GAAGAC 2 cut(s) 300, 676
Bbv12I GWGCWC 1 cut(s) 30
BbvCI CCTCAGC 1 cut(s) 1353
BbvI GCAGC 5 cut(s) 94, 203, 621, 1194, 1361
BccI CCATC 6 cut(s) 341, 673, 692, 827, 1011, 1430
BcoDI GTCTC 3 cut(s) 928, 1153, 1262
BcuI ACTAGT 1 cut(s) 199
BfaI CTAG 4 cut(s) 200, 492, 891, 1119
BfmI CTRYAG 3 cut(s) 69, 384, 635
BfrI CTTAAG 1 cut(s) 973
BisI GCNGC 6 cut(s) 108, 217, 635, 1171, 1183, 1350
BlsI GCNGC 6 cut(s) 109, 218, 636, 1172, 1184, 1351
BmcAI AGTACT 3 cut(s) 390, 422, 1129
BmgT120I GGNCC 1 cut(s) 816
BmiI GGNNCC 2 cut(s) 604, 703
BmrI ACTGGG 4 cut(s) 244, 350, 469, 538
BmsI GCATC 4 cut(s) 64, 203, 231, 1282
BmuI ACTGGG 4 cut(s) 244, 350, 469, 538
BpiI GAAGAC 2 cut(s) 300, 676
BpmI CTGGAG 3 cut(s) 760, 1126, 1263
Bpu10I CCTNAGC 1 cut(s) 1353
Bpu14I TTCGAA 1 cut(s) 642
BpuEI CTTGAG 2 cut(s) 14, 1160
BsaAI YACGTR 1 cut(s) 477
BsaBI GATNNNNATC 1 cut(s) 84
BsaJI CCNNGG 4 cut(s) 429, 598, 750, 1050
Bsc4I CCNNNNNNNGG 2 cut(s) 251, 671
Bse118I RCCGGY 1 cut(s) 103
Bse1I ACTGG 8 cut(s) 239, 356, 464, 533, 764, 1143, 1202, 1246
Bse21I CCTNAGG 1 cut(s) 727
Bse3DI GCAATG 3 cut(s) 8, 840, 1326
Bse8I GATNNNNATC 1 cut(s) 84
BseDI CCNNGG 4 cut(s) 429, 598, 750, 1050
BseGI GGATG 3 cut(s) 514, 760, 1297
BseJI GATNNNNATC 1 cut(s) 84
BseLI CCNNNNNNNGG 2 cut(s) 251, 671
BseMI GCAATG 3 cut(s) 8, 840, 1326
BseMII CTCAG 5 cut(s) 275, 741, 789, 1257, 1344
BseNI ACTGG 8 cut(s) 239, 356, 464, 533, 764, 1143, 1202, 1246
BseSI GKGCMC 1 cut(s) 607
BseXI GCAGC 5 cut(s) 94, 203, 621, 1194, 1361
BseYI CCCAGC 1 cut(s) 1386
Bsh1236I CGCG 1 cut(s) 1392
Bsh1285I CGRYCG 1 cut(s) 1012
BshFI GGCC 4 cut(s) 351, 428, 817, 1173
BshNI GGYRCC 2 cut(s) 602, 701
BsiEI CGRYCG 1 cut(s) 1012
BsiHKAI GWGCWC 1 cut(s) 30
BsiSI CCGG 1 cut(s) 104
BsiWI CGTACG 1 cut(s) 1400
BslFI GGGAC 1 cut(s) 210
BslI CCNNNNNNNGG 2 cut(s) 251, 671
BsmAI GTCTC 3 cut(s) 928, 1153, 1262
BsmBI CGTCTC 1 cut(s) 928
BsmFI GGGAC 1 cut(s) 210
BsnI GGCC 4 cut(s) 351, 428, 817, 1173
Bsp119I TTCGAA 1 cut(s) 642
Bsp1286I GDGCHC 2 cut(s) 30, 607
Bsp1407I TGTACA 1 cut(s) 471
Bsp143I GATC 3 cut(s) 442, 612, 661
Bsp19I CCATGG 1 cut(s) 1050
BspACI CCGC 5 cut(s) 400, 607, 850, 906, 1170
BspANI GGCC 4 cut(s) 351, 428, 817, 1173
BspCNI CTCAG 5 cut(s) 274, 740, 788, 1258, 1345
BspFNI CGCG 1 cut(s) 1392
BspHI TCATGA 1 cut(s) 1499
BspLI GGNNCC 2 cut(s) 604, 703
BspMAI CTGCAG 1 cut(s) 639
BspPI GGATC 2 cut(s) 437, 656
BspT104I TTCGAA 1 cut(s) 642
BspT107I GGYRCC 2 cut(s) 602, 701
BspTI CTTAAG 1 cut(s) 973
BsrDI GCAATG 3 cut(s) 8, 840, 1326
BsrFI RCCGGY 1 cut(s) 103
BsrGI TGTACA 1 cut(s) 471
BsrI ACTGG 8 cut(s) 239, 356, 464, 533, 764, 1143, 1202, 1246
BssAI RCCGGY 1 cut(s) 103
BssECI CCNNGG 4 cut(s) 429, 598, 750, 1050
BssMI GATC 3 cut(s) 442, 612, 661
BssT1I CCWWGG 2 cut(s) 429, 1050
Bst4CI ACNGT 5 cut(s) 706, 836, 1013, 1127, 1273
Bst6I CTCTTC 1 cut(s) 954
BstAFI CTTAAG 1 cut(s) 973
BstAUI TGTACA 1 cut(s) 471
BstBAI YACGTR 1 cut(s) 477
BstBI TTCGAA 1 cut(s) 642
BstC8I GCNNGC 4 cut(s) 105, 246, 607, 1317
BstDEI CTNAG 6 cut(s) 261, 727, 775, 1266, 1326, 1353
BstDSI CCRYGG 1 cut(s) 1050
BstF5I GGATG 3 cut(s) 514, 760, 1297
BstFNI CGCG 1 cut(s) 1392
BstHHI GCGC 2 cut(s) 770, 1392
BstKTI GATC 3 cut(s) 445, 615, 664
BstMAI GTCTC 3 cut(s) 928, 1153, 1262
BstMBI GATC 3 cut(s) 442, 612, 661
BstMCI CGRYCG 1 cut(s) 1012
BstMWI GCNNNNNNNGC 5 cut(s) 10, 100, 708, 1179, 1355
BstNSI RCATGY 2 cut(s) 569, 859
BstSFI CTRYAG 3 cut(s) 69, 384, 635
BstSLI GKGCMC 1 cut(s) 607
BstUI CGCG 1 cut(s) 1392
BstV1I GCAGC 5 cut(s) 94, 203, 621, 1194, 1361
BstV2I GAAGAC 2 cut(s) 300, 676
BstX2I RGATCY 1 cut(s) 661
BstXI CCANNNNNNTGG 1 cut(s) 568
BstYI RGATCY 1 cut(s) 661
Bsu36I CCTNAGG 1 cut(s) 727
BsuRI GGCC 4 cut(s) 351, 428, 817, 1173
BtgI CCRYGG 1 cut(s) 1050
BtsCI GGATG 3 cut(s) 514, 760, 1297
BtsIMutI CAGTG 3 cut(s) 648, 841, 1150
Cac8I GCNNGC 4 cut(s) 105, 246, 607, 1317
CciI TCATGA 1 cut(s) 1499
CfoI GCGC 2 cut(s) 770, 1392
Cfr10I RCCGGY 1 cut(s) 103
Cfr13I GGNCC 1 cut(s) 816
Csp6I GTAC 7 cut(s) 203, 315, 389, 421, 472, 1128, 1401
CspCI CAANNNNNGTGG 2 cut(s) 637, 672
CviAII CATG 9 cut(s) 100, 312, 404, 469, 566, 856, 1051, 1362, 1500
CviQI GTAC 7 cut(s) 203, 315, 389, 421, 472, 1128, 1401
DdeI CTNAG 6 cut(s) 261, 727, 775, 1266, 1326, 1353
DpnI GATC 3 cut(s) 444, 614, 663
DpnII GATC 3 cut(s) 442, 612, 661
Eam1104I CTCTTC 1 cut(s) 954
EarI CTCTTC 1 cut(s) 954
EciI GGCGGA 1 cut(s) 389
Eco130I CCWWGG 2 cut(s) 429, 1050
Eco32I GATATC 1 cut(s) 985
Eco57I CTGAAG 1 cut(s) 110
Eco81I CCTNAGG 1 cut(s) 727
EcoRV GATATC 1 cut(s) 985
EcoT14I CCWWGG 2 cut(s) 429, 1050
ErhI CCWWGG 2 cut(s) 429, 1050
Esp3I CGTCTC 1 cut(s) 928
FaeI CATG 9 cut(s) 103, 315, 407, 472, 569, 859, 1054, 1365, 1503
FalI AAGNNNNNCTT 1 cut(s) 1479
FaqI GGGAC 1 cut(s) 210
FatI CATG 9 cut(s) 99, 311, 403, 468, 565, 855, 1050, 1361, 1499
FauI CCCGC 1 cut(s) 614
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 6 cut(s) 108, 217, 635, 1171, 1183, 1350
FokI GGATG 3 cut(s) 521, 767, 1304
Fsp4HI GCNGC 6 cut(s) 108, 217, 635, 1171, 1183, 1350
FspBI CTAG 4 cut(s) 200, 492, 891, 1119
GlaI GCGC 2 cut(s) 769, 1391
GluI GCNGC 6 cut(s) 108, 217, 635, 1171, 1183, 1350
GsaI CCCAGC 1 cut(s) 1390
GsuI CTGGAG 3 cut(s) 760, 1126, 1263
HaeIII GGCC 4 cut(s) 351, 428, 817, 1173
HapII CCGG 1 cut(s) 104
HhaI GCGC 2 cut(s) 770, 1392
Hin1II CATG 9 cut(s) 103, 315, 407, 472, 569, 859, 1054, 1365, 1503
Hin6I GCGC 2 cut(s) 768, 1390
HinP1I GCGC 2 cut(s) 768, 1390
HincII GTYRAC 2 cut(s) 1066, 1227
HindII GTYRAC 2 cut(s) 1066, 1227
HindIII AAGCTT 1 cut(s) 1493
HpaI GTTAAC 1 cut(s) 1066
HpaII CCGG 1 cut(s) 104
HphI GGTGA 5 cut(s) 250, 679, 739, 1067, 1348
Hpy166II GTNNAC 7 cut(s) 205, 334, 474, 1058, 1066, 1227, 1482
Hpy188I TCNGA 6 cut(s) 90, 264, 395, 447, 721, 778
Hpy188III TCNNGA 7 cut(s) 369, 550, 729, 739, 1007, 1177, 1500
Hpy8I GTNNAC 7 cut(s) 205, 334, 474, 1058, 1066, 1227, 1482
Hpy99I CGWCG 2 cut(s) 797, 1156
HpyAV CCTTC 2 cut(s) 166, 1384
HpyCH4III ACNGT 5 cut(s) 706, 836, 1013, 1127, 1273
HpyCH4IV ACGT 3 cut(s) 476, 921, 1035
HpyCH4V TGCA 9 cut(s) 77, 110, 436, 637, 859, 876, 917, 1016, 1211
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 100, 708, 1179, 1355
HpyF3I CTNAG 6 cut(s) 261, 727, 775, 1266, 1326, 1353
HpySE526I ACGT 3 cut(s) 476, 921, 1035
Hsp92II CATG 9 cut(s) 103, 315, 407, 472, 569, 859, 1054, 1365, 1503
HspAI GCGC 2 cut(s) 768, 1390
KroI GCCGGC 1 cut(s) 103
KroNI GCCGGC 1 cut(s) 105
KspAI GTTAAC 1 cut(s) 1066
Kzo9I GATC 3 cut(s) 442, 612, 661
LmnI GCTCC 2 cut(s) 144, 1244
Lsp1109I GCAGC 5 cut(s) 94, 203, 621, 1194, 1361
LweI GCATC 4 cut(s) 64, 203, 231, 1282
MaeI CTAG 4 cut(s) 200, 492, 891, 1119
MaeII ACGT 3 cut(s) 476, 921, 1035
MaeIII GTNAC 2 cut(s) 590, 1273
MalI GATC 3 cut(s) 444, 614, 663
MboI GATC 3 cut(s) 442, 612, 661
MboII GAAGA 6 cut(s) 305, 350, 671, 676, 971, 1499
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 2 cut(s) 30, 607
MlyI GAGTC 3 cut(s) 767, 776, 1487
MroNI GCCGGC 1 cut(s) 103
MseI TTAA 5 cut(s) 120, 576, 912, 974, 1065
MslI CAYNNNNRTG 1 cut(s) 1074
MspA1I CMGCKG 1 cut(s) 1352
MspCI CTTAAG 1 cut(s) 973
MspI CCGG 1 cut(s) 104
MvnI CGCG 1 cut(s) 1392
MwoI GCNNNNNNNGC 5 cut(s) 10, 100, 708, 1179, 1355
NaeI GCCGGC 1 cut(s) 105
NcoI CCATGG 1 cut(s) 1050
NdeII GATC 3 cut(s) 442, 612, 661
NgoMIV GCCGGC 1 cut(s) 103
NlaIII CATG 9 cut(s) 103, 315, 407, 472, 569, 859, 1054, 1365, 1503
NlaIV GGNNCC 2 cut(s) 604, 703
NmuCI GTSAC 2 cut(s) 590, 1273
NspI RCATGY 2 cut(s) 569, 859
NspV TTCGAA 1 cut(s) 642
PagI TCATGA 1 cut(s) 1499
PdiI GCCGGC 1 cut(s) 105
Pfl23II CGTACG 1 cut(s) 1400
PkrI GCNGC 6 cut(s) 109, 218, 636, 1172, 1184, 1351
PleI GAGTC 3 cut(s) 767, 776, 1486
PpsI GAGTC 3 cut(s) 767, 776, 1486
Ppu21I YACGTR 1 cut(s) 477
PshBI ATTAAT 1 cut(s) 120
PsiI TTATAA 2 cut(s) 1302, 1446
Psp1406I AACGTT 1 cut(s) 1035
PspFI CCCAGC 1 cut(s) 1386
PspLI CGTACG 1 cut(s) 1400
PspN4I GGNNCC 2 cut(s) 604, 703
PspPI GGNCC 1 cut(s) 816
PstI CTGCAG 1 cut(s) 639
PsuI RGATCY 1 cut(s) 661
PvuII CAGCTG 1 cut(s) 1352
RsaI GTAC 7 cut(s) 204, 316, 390, 422, 473, 1129, 1402
RsaNI GTAC 7 cut(s) 203, 315, 389, 421, 472, 1128, 1401
RseI CAYNNNNRTG 1 cut(s) 1074
SaqAI TTAA 5 cut(s) 120, 576, 912, 974, 1065
SatI GCNGC 6 cut(s) 108, 217, 635, 1171, 1183, 1350
Sau3AI GATC 3 cut(s) 442, 612, 661
Sau96I GGNCC 1 cut(s) 816
ScaI AGTACT 3 cut(s) 390, 422, 1129
SchI GAGTC 3 cut(s) 767, 776, 1487
SduI GDGCHC 2 cut(s) 30, 607
SfaNI GCATC 4 cut(s) 64, 203, 231, 1282
SfcI CTRYAG 3 cut(s) 69, 384, 635
SfuI TTCGAA 1 cut(s) 642
SmiMI CAYNNNNRTG 1 cut(s) 1074
SmlI CTYRAG 3 cut(s) 29, 973, 1175
SmoI CTYRAG 3 cut(s) 29, 973, 1175
SpeI ACTAGT 1 cut(s) 199
SsiI CCGC 5 cut(s) 400, 607, 850, 906, 1170
SspI AATATT 1 cut(s) 994
SspMI CTAG 4 cut(s) 200, 492, 891, 1119
StyI CCWWGG 2 cut(s) 429, 1050
TaaI ACNGT 5 cut(s) 706, 836, 1013, 1127, 1273
TaiI ACGT 3 cut(s) 479, 924, 1038
TaqI TCGA 8 cut(s) 35, 324, 615, 642, 933, 1008, 1154, 1476
TatI WGTACW 5 cut(s) 202, 388, 420, 471, 1127
TauI GCSGC 1 cut(s) 1173
Tru1I TTAA 5 cut(s) 120, 576, 912, 974, 1065
Tru9I TTAA 5 cut(s) 120, 576, 912, 974, 1065
TscAI CASTG 3 cut(s) 655, 841, 1150
TseFI GTSAC 2 cut(s) 590, 1273
TseI GCWGC 5 cut(s) 107, 216, 634, 1182, 1349
Tsp45I GTSAC 2 cut(s) 590, 1273
TspDTI ATGAA 6 cut(s) 297, 457, 505, 1092, 1350, 1488
TspRI CASTG 3 cut(s) 655, 841, 1150
Vha464I CTTAAG 1 cut(s) 973
VspI ATTAAT 1 cut(s) 120
XapI RAATTY 2 cut(s) 158, 734
XceI RCATGY 2 cut(s) 569, 859
XcmI CCANNNNNNNNNTGG 1 cut(s) 410
XmiI GTMKAC 1 cut(s) 333
XspI CTAG 4 cut(s) 200, 492, 891, 1119
ZrmI AGTACT 3 cut(s) 390, 422, 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.