Prupe.2G097700_v2.0.a1

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000217
Physical Location & Seq
Reverse (-)
15290821 .. 15292233
1413 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G097700.1

Sequence Viewer

Length: 1413 bp
ATGGTGGACACATTGCCAAGGTGTATGGTGTTGAAATCAAGGTACAACGCCAAATACTTGAGCTACGTAAAGGATGATGGGGAGATTCATGGGTTTCTCAAGTTCTCCGGAGAAGAGCTCGTTAGTCCGTACGCAATGTTCCATGTGGAGATGGCAAAGGGCGGGAAGGGACTGGTGCACATAAGATGCAGCTACAACAATAAATACTGGGTCAGGTGGTCGGTCAACCACTATTGGATTGTTGCTGGCGCGAATGAACCCGAGGAAGACCAATCCAAATGGTCTTGCACCTTGTTCGAGCCCGTCTATGTAGACGATAAGGATCCTGCTCAAGGGGTCCGATTTCGACACGTCCAGCTCGGGCACTATGCATGCTTATGGAGGGTAGACCCGCCACAAGACTCGTGCTTGTACGCAGGATCTGAGAATCCTAACACGGAGCTGTGCGACGCCTGCTTAATCGTTGATTGGGAAACGGTGTTGGTATTGCCCAAGCACGTCGCCTTCAAGGGTGACAATGGGAAATACCTGAGCGCCAGCATGTTTAATGGCAACCCTTTCTTGCAATTCTCATCCAATGACATTGGACAATCCAGTGTGGGGAACGAGGTGTTCTCTAATGGGGATGGGAGTGTTCGGATCAAATCCAATCTCTCTGGAAGGTTCTGGAGGCGCAGCCCTAATTGGATCTGGGCCGACTCCAATCTTGATGGTAACGAAATCAACAAGGACATGTTGTTTTGGCCTATTAAGCTTGACAATAACAAGGTTGCTCTCCGCAACTTGGGCAACGATAATTTCTGCGTTAGACTGACCACGGATGGGTTTGATTCCTGTCTCAATGCTGGCGACCCTAGTATCATCAAAGAGGCGTGCATGGAGCTGGAAGAGCTTGTTGTGTCTAGGAGCATATACAACATCAACTTTCGCCTCCTTGACTCCAGGATCTATAGCCAAAGAGTTGTCACCATGGCCAACGGAGACGCGGTTAACCAAACTCGAGAACAAAACACAATAGACTTGAAGCTCTCGTACAAAGACACCCGAAGCACTACTTGGAATTCTAGCGTTTCAATGAAGATGGGCCTCAAGACTAATGTTGAAACTGGAGTTCCTTTGATTGCAAAAGGAGAGATTGAAATATCCGCTGCATTTGGGACACAAATCCAGTGGGGGGAAACCGACACCTCTGAAAGTGTAGCAGAGACTGTGTACAAGGTTGCTGTGCCCCCAATGTCTGTGGTGAAGGTAAGTCTGATGGCGACTAGGGGCTCATGCGATGTTCCATTCTCCTACACTCAGCGGGATATGCTTACCAACGGCAAACAGGTTACCCACACCATGGACGATGGCGTTTACAGTGGCGTCAATTCCTACAACTTCAAGTATGAGACCAAACAAGAAAGCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

471

Amino Acids

52.97

Weight (kDa)

5.52

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1342
AccI GTMKAC 2 cut(s) 312, 387
AccII CGCG 2 cut(s) 251, 986
AccIII TCCGGA 1 cut(s) 107
AciI CCGC 6 cut(s) 162, 392, 778, 986, 1146, 1303
AclWI GGATC 6 cut(s) 317, 330, 427, 647, 695, 953
AcoI YGGCCR 1 cut(s) 972
AcsI RAATTY 1 cut(s) 1060
AcyI GRCGYC 2 cut(s) 450, 1365
AfaI GTAC 5 cut(s) 44, 131, 413, 1034, 1214
AfiI CCNNNNNNNGG 6 cut(s) 332, 600, 784, 822, 1174, 1342
AflIII ACRYGT 2 cut(s) 349, 732
AgsI TTSAA 7 cut(s) 34, 508, 1024, 1074, 1103, 1139, 1384
AjiI CACGTC 2 cut(s) 352, 499
AjnI CCWGG 1 cut(s) 941
AjuI GAANNNNNNNTTGG 2 cut(s) 1039, 1071
AluBI AGCT 9 cut(s) 63, 118, 192, 358, 442, 754, 883, 892, 1027
AluI AGCT 9 cut(s) 63, 118, 192, 358, 442, 754, 883, 892, 1027
Alw21I GWGCWC 2 cut(s) 120, 180
Alw26I GTCTC 4 cut(s) 842, 975, 1199, 1385
Alw44I GTGCAC 1 cut(s) 176
AlwI GGATC 6 cut(s) 317, 330, 427, 647, 695, 953
AlwNI CAGNNNCTG 2 cut(s) 422, 1208
Ama87I CYCGRG 3 cut(s) 260, 359, 999
Aor13HI TCCGGA 1 cut(s) 107
AoxI GGCC 4 cut(s) 693, 743, 972, 1084
ApaLI GTGCAC 1 cut(s) 176
ApeKI GCWGC 3 cut(s) 189, 675, 1148
ApoI RAATTY 1 cut(s) 1060
AspLEI GCGC 3 cut(s) 251, 536, 675
AspS9I GGNCC 3 cut(s) 337, 693, 1084
AsuHPI GGTGA 3 cut(s) 524, 958, 1255
AvaI CYCGRG 3 cut(s) 260, 359, 999
AvaII GGWCC 1 cut(s) 337
BaeGI GKGCMC 3 cut(s) 180, 366, 1230
BaeI ACNNNNGTAYC 2 cut(s) 841, 874
BalI TGGCCA 1 cut(s) 974
BamHI GGATCC 1 cut(s) 322
BanII GRGCYC 3 cut(s) 120, 303, 1274
BarI GAAGNNNNNNTAC 2 cut(s) 1016, 1048
BauI CACGAG 1 cut(s) 403
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 2 cut(s) 120, 180
BbvI GCAGC 3 cut(s) 201, 687, 1135
BccI CCATC 8 cut(s) 71, 145, 620, 704, 815, 1075, 1252, 1343
BceAI ACGGC 1 cut(s) 1336
BcgI CGANNNNNNTGC 2 cut(s) 277, 311
BciT130I CCWGG 1 cut(s) 943
BcoDI GTCTC 4 cut(s) 842, 975, 1199, 1385
BfaI CTAG 4 cut(s) 855, 903, 1065, 1266
BfmI CTRYAG 1 cut(s) 949
BfoI RGCGCY 1 cut(s) 537
BisI GCNGC 3 cut(s) 190, 676, 1149
BlsI GCNGC 3 cut(s) 191, 677, 1150
Bme1390I CCNGG 1 cut(s) 943
Bme18I GGWCC 1 cut(s) 337
BmeT110I CYCGRG 3 cut(s) 260, 359, 999
BmgBI CACGTC 2 cut(s) 352, 499
BmgT120I GGNCC 3 cut(s) 337, 693, 1084
BmiI GGNNCC 2 cut(s) 324, 338
BmrFI CCNGG 1 cut(s) 943
BmrI ACTGGG 1 cut(s) 217
BmsI GCATC 1 cut(s) 176
BmuI ACTGGG 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 273
BplI GAGNNNNNCTC 4 cut(s) 102, 134, 599, 631
BpmI CTGGAG 3 cut(s) 688, 925, 1128
Bpu10I CCTNAGC 1 cut(s) 530
BpuEI CTTGAG 4 cut(s) 79, 83, 315, 1073
BsaAI YACGTR 1 cut(s) 67
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 2 cut(s) 450, 1365
BsaI GGTCTC 1 cut(s) 1385
BsaJI CCNNGG 5 cut(s) 17, 261, 816, 969, 1341
BsaWI WCCGGW 1 cut(s) 107
BsaXI ACNNNNNCTCC 2 cut(s) 972, 1002
Bsc4I CCNNNNNNNGG 6 cut(s) 332, 600, 784, 822, 1174, 1342
Bse1I ACTGG 5 cut(s) 177, 212, 594, 1111, 1168
Bse3DI GCAATG 2 cut(s) 11, 141
Bse8I GATNNNNATC 1 cut(s) 321
BseAI TCCGGA 1 cut(s) 107
BseBI CCWGG 1 cut(s) 943
BseDI CCNNGG 5 cut(s) 17, 261, 816, 969, 1341
BseGI GGATG 4 cut(s) 79, 572, 631, 826
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 6 cut(s) 332, 600, 784, 822, 1174, 1342
BseMI GCAATG 2 cut(s) 11, 141
BseMII CTCAG 3 cut(s) 414, 521, 1313
BseNI ACTGG 5 cut(s) 177, 212, 594, 1111, 1168
BseSI GKGCMC 3 cut(s) 180, 366, 1230
BseXI GCAGC 3 cut(s) 201, 687, 1135
Bsh1236I CGCG 2 cut(s) 251, 986
BshFI GGCC 4 cut(s) 695, 745, 974, 1086
BsiHKAI GWGCWC 2 cut(s) 120, 180
BsiHKCI CYCGRG 3 cut(s) 260, 359, 999
BsiSI CCGG 1 cut(s) 108
BsiWI CGTACG 1 cut(s) 129
BslFI GGGAC 2 cut(s) 183, 1171
BslI CCNNNNNNNGG 6 cut(s) 332, 600, 784, 822, 1174, 1342
BsmAI GTCTC 4 cut(s) 842, 975, 1199, 1385
BsmBI CGTCTC 1 cut(s) 975
BsmFI GGGAC 2 cut(s) 183, 1171
BsnI GGCC 4 cut(s) 695, 745, 974, 1086
Bso31I GGTCTC 1 cut(s) 1385
BsoBI CYCGRG 3 cut(s) 260, 359, 999
Bsp1286I GDGCHC 6 cut(s) 120, 180, 303, 366, 1230, 1274
Bsp13I TCCGGA 1 cut(s) 107
Bsp1407I TGTACA 1 cut(s) 1212
Bsp143I GATC 5 cut(s) 322, 419, 639, 687, 945
Bsp19I CCATGG 2 cut(s) 969, 1341
BspACI CCGC 6 cut(s) 162, 392, 778, 986, 1146, 1303
BspANI GGCC 4 cut(s) 695, 745, 974, 1086
BspCNI CTCAG 3 cut(s) 415, 522, 1312
BspEI TCCGGA 1 cut(s) 107
BspFNI CGCG 2 cut(s) 251, 986
BspLI GGNNCC 2 cut(s) 324, 338
BspPI GGATC 6 cut(s) 317, 330, 427, 647, 695, 953
BspQI GCTCTTC 2 cut(s) 108, 882
BspTNI GGTCTC 1 cut(s) 1385
BsrDI GCAATG 2 cut(s) 11, 141
BsrGI TGTACA 1 cut(s) 1212
BsrI ACTGG 5 cut(s) 177, 212, 594, 1111, 1168
BssECI CCNNGG 5 cut(s) 17, 261, 816, 969, 1341
BssMI GATC 5 cut(s) 322, 419, 639, 687, 945
BssNI GRCGYC 2 cut(s) 450, 1365
BssSI CACGAG 1 cut(s) 403
BssT1I CCWWGG 3 cut(s) 17, 969, 1341
Bst2BI CACGAG 1 cut(s) 403
Bst2UI CCWGG 1 cut(s) 943
Bst4CI ACNGT 3 cut(s) 478, 1210, 1361
Bst6I CTCTTC 2 cut(s) 108, 882
BstACI GRCGYC 2 cut(s) 450, 1365
BstAUI TGTACA 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 67
BstC8I GCNNGC 6 cut(s) 247, 373, 454, 538, 847, 874
BstDEI CTNAG 3 cut(s) 423, 530, 1299
BstDSI CCRYGG 3 cut(s) 816, 969, 1341
BstEII GGTNACC 1 cut(s) 1330
BstENI CCTNNNNNAGG 1 cut(s) 330
BstF5I GGATG 4 cut(s) 79, 572, 631, 826
BstFNI CGCG 2 cut(s) 251, 986
BstH2I RGCGCY 1 cut(s) 537
BstHHI GCGC 3 cut(s) 251, 536, 675
BstKTI GATC 5 cut(s) 325, 422, 642, 690, 948
BstMAI GTCTC 4 cut(s) 842, 975, 1199, 1385
BstMBI GATC 5 cut(s) 322, 419, 639, 687, 945
BstMWI GCNNNNNNNGC 5 cut(s) 453, 751, 786, 889, 1309
BstNI CCWGG 1 cut(s) 943
BstNSI RCATGY 3 cut(s) 375, 544, 736
BstPI GGTNACC 1 cut(s) 1330
BstSCI CCNGG 1 cut(s) 941
BstSFI CTRYAG 1 cut(s) 949
BstSLI GKGCMC 3 cut(s) 180, 366, 1230
BstSNI TACGTA 1 cut(s) 67
BstUI CGCG 2 cut(s) 251, 986
BstV1I GCAGC 3 cut(s) 201, 687, 1135
BstV2I GAAGAC 1 cut(s) 273
BstX2I RGATCY 4 cut(s) 322, 419, 687, 945
BstYI RGATCY 4 cut(s) 322, 419, 687, 945
BsuRI GGCC 4 cut(s) 695, 745, 974, 1086
BtgI CCRYGG 3 cut(s) 816, 969, 1341
BtgZI GCGATG 1 cut(s) 1293
BtrI CACGTC 2 cut(s) 352, 499
BtsCI GGATG 4 cut(s) 79, 572, 631, 826
BtsIMutI CAGTG 3 cut(s) 601, 1175, 1366
Cac8I GCNNGC 6 cut(s) 247, 373, 454, 538, 847, 874
CaiI CAGNNNCTG 2 cut(s) 422, 1208
CfoI GCGC 3 cut(s) 251, 536, 675
Cfr13I GGNCC 3 cut(s) 337, 693, 1084
CseI GACGC 3 cut(s) 458, 992, 1354
Csp6I GTAC 5 cut(s) 43, 130, 412, 1033, 1213
CspCI CAANNNNNGTGG 4 cut(s) 1151, 1186, 1221, 1256
CviAII CATG 9 cut(s) 89, 143, 372, 541, 733, 877, 970, 1275, 1342
CviQI GTAC 5 cut(s) 43, 130, 412, 1033, 1213
DdeI CTNAG 3 cut(s) 423, 530, 1299
DpnI GATC 5 cut(s) 324, 421, 641, 689, 947
DpnII GATC 5 cut(s) 322, 419, 639, 687, 945
EaeI YGGCCR 1 cut(s) 972
Eam1104I CTCTTC 2 cut(s) 108, 882
EarI CTCTTC 2 cut(s) 108, 882
Ecl136II GAGCTC 1 cut(s) 118
Eco105I TACGTA 1 cut(s) 67
Eco130I CCWWGG 3 cut(s) 17, 969, 1341
Eco24I GRGCYC 3 cut(s) 120, 303, 1274
Eco31I GGTCTC 1 cut(s) 1385
Eco47I GGWCC 1 cut(s) 337
Eco53kI GAGCTC 1 cut(s) 118
Eco88I CYCGRG 3 cut(s) 260, 359, 999
Eco91I GGTNACC 1 cut(s) 1330
EcoICRI GAGCTC 1 cut(s) 118
EcoNI CCTNNNNNAGG 1 cut(s) 330
EcoO65I GGTNACC 1 cut(s) 1330
EcoRI GAATTC 1 cut(s) 1060
EcoRII CCWGG 1 cut(s) 941
EcoT14I CCWWGG 3 cut(s) 17, 969, 1341
EcoT22I ATGCAT 1 cut(s) 373
EcoT38I GRGCYC 3 cut(s) 120, 303, 1274
ErhI CCWWGG 3 cut(s) 17, 969, 1341
Esp3I CGTCTC 1 cut(s) 975
FaeI CATG 9 cut(s) 92, 146, 375, 544, 736, 880, 973, 1278, 1345
FalI AAGNNNNNCTT 2 cut(s) 1039, 1071
FaqI GGGAC 2 cut(s) 183, 1171
FatI CATG 9 cut(s) 88, 142, 371, 540, 732, 876, 969, 1274, 1341
FauI CCCGC 3 cut(s) 155, 399, 1296
FblI GTMKAC 2 cut(s) 312, 387
Fnu4HI GCNGC 3 cut(s) 190, 676, 1149
FokI GGATG 4 cut(s) 86, 559, 638, 833
FriOI GRGCYC 3 cut(s) 120, 303, 1274
Fsp4HI GCNGC 3 cut(s) 190, 676, 1149
FspBI CTAG 4 cut(s) 855, 903, 1065, 1266
GlaI GCGC 3 cut(s) 250, 535, 674
GluI GCNGC 3 cut(s) 190, 676, 1149
GsuI CTGGAG 3 cut(s) 688, 925, 1128
HaeII RGCGCY 1 cut(s) 537
HaeIII GGCC 4 cut(s) 695, 745, 974, 1086
HapII CCGG 1 cut(s) 108
HgaI GACGC 3 cut(s) 458, 992, 1354
HhaI GCGC 3 cut(s) 251, 536, 675
Hin1I GRCGYC 2 cut(s) 450, 1365
Hin1II CATG 9 cut(s) 92, 146, 375, 544, 736, 880, 973, 1278, 1345
Hin6I GCGC 3 cut(s) 249, 534, 673
HinP1I GCGC 3 cut(s) 249, 534, 673
HincII GTYRAC 2 cut(s) 226, 991
HindII GTYRAC 2 cut(s) 226, 991
HindIII AAGCTT 1 cut(s) 752
HinfI GANTC 6 cut(s) 85, 401, 427, 698, 830, 938
HpaI GTTAAC 1 cut(s) 991
HpaII CCGG 1 cut(s) 108
HphI GGTGA 3 cut(s) 524, 958, 1255
Hpy166II GTNNAC 8 cut(s) 7, 178, 226, 313, 388, 991, 1213, 1357
Hpy188I TCNGA 5 cut(s) 341, 424, 639, 1192, 1257
Hpy188III TCNNGA 6 cut(s) 108, 657, 667, 707, 1001, 1090
Hpy8I GTNNAC 8 cut(s) 7, 178, 226, 313, 388, 991, 1213, 1357
Hpy99I CGWCG 2 cut(s) 452, 503
HpyAV CCTTC 4 cut(s) 160, 514, 654, 1240
HpyCH4III ACNGT 3 cut(s) 478, 1210, 1361
HpyCH4IV ACGT 3 cut(s) 66, 351, 498
HpyCH4V TGCA 8 cut(s) 178, 189, 288, 371, 565, 876, 1124, 1151
HpyF10VI GCNNNNNNNGC 5 cut(s) 453, 751, 786, 889, 1309
HpyF3I CTNAG 3 cut(s) 423, 530, 1299
HpySE526I ACGT 3 cut(s) 66, 351, 498
Hsp92I GRCGYC 2 cut(s) 450, 1365
Hsp92II CATG 9 cut(s) 92, 146, 375, 544, 736, 880, 973, 1278, 1345
HspAI GCGC 3 cut(s) 249, 534, 673
Kpn2I TCCGGA 1 cut(s) 107
KspAI GTTAAC 1 cut(s) 991
Kzo9I GATC 5 cut(s) 322, 419, 639, 687, 945
LguI GCTCTTC 2 cut(s) 108, 882
LmnI GCTCC 3 cut(s) 439, 880, 906
Lsp1109I GCAGC 3 cut(s) 201, 687, 1135
LweI GCATC 1 cut(s) 176
MaeI CTAG 4 cut(s) 855, 903, 1065, 1266
MaeII ACGT 3 cut(s) 66, 351, 498
MaeIII GTNAC 4 cut(s) 512, 713, 964, 1330
MalI GATC 5 cut(s) 324, 421, 641, 689, 947
MboI GATC 5 cut(s) 322, 419, 639, 687, 945
MboII GAAGA 4 cut(s) 125, 278, 899, 1090
MflI RGATCY 4 cut(s) 322, 419, 687, 945
MhlI GDGCHC 6 cut(s) 120, 180, 303, 366, 1230, 1274
MlsI TGGCCA 1 cut(s) 974
MluCI AATT 5 cut(s) 566, 682, 796, 1060, 1369
MluNI TGGCCA 1 cut(s) 974
MlyI GAGTC 3 cut(s) 395, 692, 932
MnlI CCTC 8 cut(s) 256, 375, 601, 663, 862, 941, 1097, 1198
Mox20I TGGCCA 1 cut(s) 974
Mph1103I ATGCAT 1 cut(s) 373
MroI TCCGGA 1 cut(s) 107
MscI TGGCCA 1 cut(s) 974
MseI TTAA 4 cut(s) 458, 546, 750, 990
MslI CAYNNNNRTG 1 cut(s) 376
Msp20I TGGCCA 1 cut(s) 974
MspA1I CMGCKG 2 cut(s) 1148, 1303
MspI CCGG 1 cut(s) 108
MspR9I CCNGG 1 cut(s) 943
MvaI CCWGG 1 cut(s) 943
MvnI CGCG 2 cut(s) 251, 986
MwoI GCNNNNNNNGC 5 cut(s) 453, 751, 786, 889, 1309
NcoI CCATGG 2 cut(s) 969, 1341
NdeII GATC 5 cut(s) 322, 419, 639, 687, 945
NlaIII CATG 9 cut(s) 92, 146, 375, 544, 736, 880, 973, 1278, 1345
NlaIV GGNNCC 2 cut(s) 324, 338
NmuCI GTSAC 2 cut(s) 512, 964
NsiI ATGCAT 1 cut(s) 373
NspI RCATGY 3 cut(s) 375, 544, 736
PaeI GCATGC 1 cut(s) 375
PaeR7I CTCGAG 1 cut(s) 999
PciI ACATGT 1 cut(s) 732
PciSI GCTCTTC 2 cut(s) 108, 882
PfeI GAWTC 3 cut(s) 85, 427, 830
Pfl23II CGTACG 1 cut(s) 129
PflMI CCANNNNNTGG 1 cut(s) 1342
PfoI TCCNGGA 1 cut(s) 941
PkrI GCNGC 3 cut(s) 191, 677, 1150
PleI GAGTC 3 cut(s) 395, 692, 932
PpsI GAGTC 3 cut(s) 395, 692, 932
Ppu21I YACGTR 1 cut(s) 67
PscI ACATGT 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 120
Psp6I CCWGG 1 cut(s) 941
PspEI GGTNACC 1 cut(s) 1330
PspGI CCWGG 1 cut(s) 941
PspLI CGTACG 1 cut(s) 129
PspN4I GGNNCC 2 cut(s) 324, 338
PspPI GGNCC 3 cut(s) 337, 693, 1084
PsrI GAACNNNNNNTAC 2 cut(s) 122, 154
PstNI CAGNNNCTG 2 cut(s) 422, 1208
PsuI RGATCY 4 cut(s) 322, 419, 687, 945
RsaI GTAC 5 cut(s) 44, 131, 413, 1034, 1214
RsaNI GTAC 5 cut(s) 43, 130, 412, 1033, 1213
RseI CAYNNNNRTG 1 cut(s) 376
SacI GAGCTC 1 cut(s) 120
SapI GCTCTTC 2 cut(s) 108, 882
SaqAI TTAA 4 cut(s) 458, 546, 750, 990
SatI GCNGC 3 cut(s) 190, 676, 1149
Sau3AI GATC 5 cut(s) 322, 419, 639, 687, 945
Sau96I GGNCC 3 cut(s) 337, 693, 1084
SchI GAGTC 3 cut(s) 395, 692, 932
ScrFI CCNGG 1 cut(s) 943
SduI GDGCHC 6 cut(s) 120, 180, 303, 366, 1230, 1274
SfaNI GCATC 1 cut(s) 176
SfcI CTRYAG 1 cut(s) 949
Sfr274I CTCGAG 1 cut(s) 999
SinI GGWCC 1 cut(s) 337
SlaI CTCGAG 1 cut(s) 999
SmiMI CAYNNNNRTG 1 cut(s) 376
SmlI CTYRAG 5 cut(s) 58, 98, 330, 999, 1088
SmoI CTYRAG 5 cut(s) 58, 98, 330, 999, 1088
SnaBI TACGTA 1 cut(s) 67
SphI GCATGC 1 cut(s) 375
Sse9I AATT 5 cut(s) 566, 682, 796, 1060, 1369
SsiI CCGC 6 cut(s) 162, 392, 778, 986, 1146, 1303
SspMI CTAG 4 cut(s) 855, 903, 1065, 1266
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 1 cut(s) 941
StyI CCWWGG 3 cut(s) 17, 969, 1341
TaaI ACNGT 3 cut(s) 478, 1210, 1361
TaiI ACGT 3 cut(s) 69, 354, 501
TaqI TCGA 3 cut(s) 297, 346, 1000
TaqII GACCGA 1 cut(s) 211
TasI AATT 5 cut(s) 566, 682, 796, 1060, 1369
TatI WGTACW 1 cut(s) 1212
TfiI GAWTC 3 cut(s) 85, 427, 830
Tru1I TTAA 4 cut(s) 458, 546, 750, 990
Tru9I TTAA 4 cut(s) 458, 546, 750, 990
TscAI CASTG 3 cut(s) 601, 1175, 1366
TseFI GTSAC 2 cut(s) 512, 964
TseI GCWGC 3 cut(s) 189, 675, 1148
Tsp45I GTSAC 2 cut(s) 512, 964
TspDTI ATGAA 3 cut(s) 77, 270, 1091
TspGWI ACGGA 4 cut(s) 117, 452, 833, 993
TspRI CASTG 3 cut(s) 601, 1175, 1366
Van91I CCANNNNNTGG 1 cut(s) 1342
VneI GTGCAC 1 cut(s) 176
VpaK11BI GGWCC 1 cut(s) 337
XagI CCTNNNNNAGG 1 cut(s) 330
XapI RAATTY 1 cut(s) 1060
XceI RCATGY 3 cut(s) 375, 544, 736
XhoI CTCGAG 1 cut(s) 999
XmiI GTMKAC 2 cut(s) 312, 387
XspI CTAG 4 cut(s) 855, 903, 1065, 1266
Zsp2I ATGCAT 1 cut(s) 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.