Prupe.2G087400_v2.0.a1

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000217
Physical Location & Seq
Reverse (-)
13829770 .. 13831191
1422 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G087400.1

Sequence Viewer

Length: 1422 bp
ATGGTGAACACACTGCCAAGGTATATGGTGTTGAAATCAAAGTACAATGCCAAATACTTGAGCTACGTAAAGGAAGATGTGCAGATTCATGGGTTTCTCAAGTTCTCCGGTGAAGAGGTCGTGAGTCTGTATTCAAAGTTCCATGTGGAGATGGCAAAGGGCGGGACGGGACTGGTGCACATAAGATGCTGCTACAACAATAAATACTGGGTCAGGTGCTCGGACAACTACTATTGGATTGTTGCTGGAGCGAATGAACCCGAGGAAGACCAATCCAAATGGTTTTGCACCTTGTTCGAGCCCGTCTACATAGACAATAACGATCCTGCTCAAGGGGTCAGATTTCGACACGTCCAGCTCGGGCACTATGCATGCTTAGGGAGAGAGGCCCCGCCAAAATACTCGTGCTTGTTTGCAGGATCTGCGGCGCCTAACAGGGAGCTGCGCGACGCCTGCTTAATCGTTGATTGGGAAACGCTGTTGGTATTGCCCAAGCATGTCTCCTTCAAGGGCGACAATGGGAAATACCTGAGCGCCCGCAAGTTTAAGCGCCACCCTTTCTTGCAATTCTCATCCACTGACGTTGGAGAATCAAGTGTGGGGAACGAGGTGTTCTCTAACGGGGATGGGAGTGTTCGGATCAAATCCAATCTCTTTGGAAAGTTCTGGAGGCGCAGCCCTAATTGGATCTGGGCCGACTCCGATCTTGACGGTAACGAAAGCAACAAGGACATGTTGTTTTGGCCTATTAAGCTTGGCAATGACAACAAGGTTGCTCTCCGCAACTTGGGCAATGATAATTTCTGCTTTAGACTGACCAAGGACGGGTTTGTGTCCTGTCTCAATGCTGGCGGCCCTAATATCGTCGGAGAGGCGTACATGGAGGTGGGAGAGCTTGTTGTGTCTAGGAGCATTTACAACGTTAACTTTCGCCTCCTTGACTCCCGGATCTATAGCCAAAGTGTTGTCTCCATGGCCACCGGAGATGCCGTTAACCGAACTCAAGAAGAAAACAAAATAAACTTGACGCTCTCGTACAAAGAAAGCAAGAGCCGTACTTGGAATTCTAGCGTTTCAATGAAGTTGGGAATCGAGACCAAAGTTCAAACTGGAGTTCCTTTGATTGCAGAAGGACAGATTGAAATATCGGCTGAATTCGCTACAGAATTCCAGTGGGGGAAAACCAACACCTCCGAAAGTGAATTAGGGACTGTGCACGAGGTTGTTGTGCCCCCAATGTCTAGGGTGAAAGTGAGTCTCATGGCGACTAGGGGCTCATGCGATGTTCCATTCTCCTACACTCAGCGGGATACGCTTATTGACGGCACAACTGTTACCCAGGACATGGACGATGGCGTTTACACTGGCGTCAATTCCTACAACTTCAAGTTTGAGACCAAACAAGAAAGCCTGTGTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

474

Amino Acids

53.38

Weight (kDa)

6.3

Isoelectric Point (pI)

41.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 427
AccB7I CCANNNNNTGG 1 cut(s) 1345
AccI GTMKAC 1 cut(s) 306
AccII CGCG 1 cut(s) 447
AciI CCGC 7 cut(s) 162, 392, 425, 538, 781, 852, 1306
AclI AACGTT 1 cut(s) 921
AclWI GGATC 5 cut(s) 317, 427, 647, 695, 956
AcoI YGGCCR 1 cut(s) 975
AcsI RAATTY 3 cut(s) 1063, 1154, 1166
AcyI GRCGYC 3 cut(s) 428, 450, 1368
AfaI GTAC 4 cut(s) 44, 878, 1037, 1057
AfiI CCNNNNNNNGG 4 cut(s) 332, 787, 825, 1345
AflIII ACRYGT 2 cut(s) 349, 732
AgsI TTSAA 7 cut(s) 34, 135, 508, 1077, 1106, 1142, 1387
AjiI CACGTC 1 cut(s) 352
AjnI CCWGG 1 cut(s) 1338
AluBI AGCT 5 cut(s) 63, 358, 442, 754, 895
AluI AGCT 5 cut(s) 63, 358, 442, 754, 895
Alw21I GWGCWC 3 cut(s) 180, 221, 1218
Alw26I GTCTC 6 cut(s) 505, 845, 973, 1088, 1262, 1388
Alw44I GTGCAC 2 cut(s) 176, 1214
AlwI GGATC 5 cut(s) 317, 427, 647, 695, 956
AlwNI CAGNNNCTG 1 cut(s) 422
Ama87I CYCGRG 2 cut(s) 260, 359
AoxI GGCC 5 cut(s) 387, 693, 743, 853, 975
ApaLI GTGCAC 2 cut(s) 176, 1214
ApeKI GCWGC 3 cut(s) 189, 442, 675
ApoI RAATTY 3 cut(s) 1063, 1154, 1166
AspLEI GCGC 5 cut(s) 430, 447, 536, 552, 675
AspS9I GGNCC 3 cut(s) 388, 693, 854
AsuC2I CCSGG 1 cut(s) 946
AsuHPI GGTGA 3 cut(s) 16, 122, 1258
AvaI CYCGRG 2 cut(s) 260, 359
BaeGI GKGCMC 4 cut(s) 180, 366, 1218, 1233
BalI TGGCCA 1 cut(s) 977
BanI GGYRCC 1 cut(s) 427
BanII GRGCYC 2 cut(s) 303, 1277
BauI CACGAG 2 cut(s) 403, 1217
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 3 cut(s) 180, 221, 1218
BbvI GCAGC 3 cut(s) 176, 429, 687
BccI CCATC 3 cut(s) 145, 620, 1346
BceAI ACGGC 3 cut(s) 974, 1038, 1339
BcgI CGANNNNNNTGC 2 cut(s) 277, 311
BciT130I CCWGG 1 cut(s) 1340
BciVI GTATCC 1 cut(s) 1303
BcnI CCSGG 1 cut(s) 946
BcoDI GTCTC 6 cut(s) 505, 845, 973, 1088, 1262, 1388
BfaI CTAG 4 cut(s) 906, 1068, 1242, 1269
BfmI CTRYAG 2 cut(s) 952, 1161
BfoI RGCGCY 3 cut(s) 431, 537, 553
BfuI GTATCC 1 cut(s) 1303
BisI GCNGC 5 cut(s) 190, 426, 443, 676, 853
BlsI GCNGC 5 cut(s) 191, 427, 444, 677, 854
Bme1390I CCNGG 2 cut(s) 946, 1340
BmeT110I CYCGRG 2 cut(s) 260, 359
BmgBI CACGTC 1 cut(s) 352
BmgT120I GGNCC 3 cut(s) 388, 693, 854
BmiI GGNNCC 2 cut(s) 390, 429
BmrFI CCNGG 2 cut(s) 946, 1340
BmrI ACTGGG 1 cut(s) 217
BmsI GCATC 2 cut(s) 176, 976
BmuI ACTGGG 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 273
BplI GAGNNNNNCTC 2 cut(s) 599, 631
BpmI CTGGAG 3 cut(s) 267, 688, 1131
Bpu10I CCTNAGC 2 cut(s) 376, 530
BpuEI CTTGAG 4 cut(s) 79, 83, 315, 987
BpuMI CCSGG 1 cut(s) 946
BsaAI YACGTR 1 cut(s) 67
BsaHI GRCGYC 3 cut(s) 428, 450, 1368
BsaI GGTCTC 2 cut(s) 1088, 1388
BsaJI CCNNGG 5 cut(s) 17, 261, 819, 972, 1338
BsaWI WCCGGW 2 cut(s) 107, 980
BsaXI ACNNNNNCTCC 4 cut(s) 882, 912, 975, 1005
Bsc4I CCNNNNNNNGG 4 cut(s) 332, 787, 825, 1345
Bse1I ACTGG 5 cut(s) 177, 212, 1114, 1171, 1369
Bse3DI GCAATG 2 cut(s) 766, 799
BseBI CCWGG 1 cut(s) 1340
BseDI CCNNGG 5 cut(s) 17, 261, 819, 972, 1338
BseGI GGATG 2 cut(s) 572, 631
BseLI CCNNNNNNNGG 4 cut(s) 332, 787, 825, 1345
BseMI GCAATG 2 cut(s) 766, 799
BseMII CTCAG 2 cut(s) 521, 1316
BseNI ACTGG 5 cut(s) 177, 212, 1114, 1171, 1369
BseSI GKGCMC 4 cut(s) 180, 366, 1218, 1233
BseXI GCAGC 3 cut(s) 176, 429, 687
BsgI GTGCAG 1 cut(s) 101
Bsh1236I CGCG 1 cut(s) 447
BshFI GGCC 5 cut(s) 389, 695, 745, 855, 977
BshNI GGYRCC 1 cut(s) 427
BsiHKAI GWGCWC 3 cut(s) 180, 221, 1218
BsiHKCI CYCGRG 2 cut(s) 260, 359
BsiSI CCGG 3 cut(s) 108, 946, 981
BslFI GGGAC 3 cut(s) 178, 183, 1222
BslI CCNNNNNNNGG 4 cut(s) 332, 787, 825, 1345
BsmAI GTCTC 6 cut(s) 505, 845, 973, 1088, 1262, 1388
BsmFI GGGAC 3 cut(s) 178, 183, 1222
BsnI GGCC 5 cut(s) 389, 695, 745, 855, 977
Bso31I GGTCTC 2 cut(s) 1088, 1388
BsoBI CYCGRG 2 cut(s) 260, 359
Bsp1286I GDGCHC 7 cut(s) 180, 221, 303, 366, 1218, 1233, 1277
Bsp143I GATC 6 cut(s) 322, 419, 639, 687, 703, 948
Bsp19I CCATGG 1 cut(s) 972
BspACI CCGC 7 cut(s) 162, 392, 425, 538, 781, 852, 1306
BspANI GGCC 5 cut(s) 389, 695, 745, 855, 977
BspCNI CTCAG 2 cut(s) 522, 1315
BspFNI CGCG 1 cut(s) 447
BspLI GGNNCC 2 cut(s) 390, 429
BspPI GGATC 5 cut(s) 317, 427, 647, 695, 956
BspT107I GGYRCC 1 cut(s) 427
BspTNI GGTCTC 2 cut(s) 1088, 1388
BsrDI GCAATG 2 cut(s) 766, 799
BsrI ACTGG 5 cut(s) 177, 212, 1114, 1171, 1369
BssECI CCNNGG 5 cut(s) 17, 261, 819, 972, 1338
BssMI GATC 6 cut(s) 322, 419, 639, 687, 703, 948
BssNI GRCGYC 3 cut(s) 428, 450, 1368
BssSI CACGAG 2 cut(s) 403, 1217
BssT1I CCWWGG 3 cut(s) 17, 819, 972
Bst2BI CACGAG 2 cut(s) 403, 1217
Bst2UI CCWGG 1 cut(s) 1340
Bst4CI ACNGT 3 cut(s) 713, 1213, 1333
Bst6I CTCTTC 1 cut(s) 108
BstACI GRCGYC 3 cut(s) 428, 450, 1368
BstAPI GCANNNNNTGC 1 cut(s) 422
BstBAI YACGTR 1 cut(s) 67
BstC8I GCNNGC 4 cut(s) 373, 454, 538, 850
BstDEI CTNAG 3 cut(s) 376, 530, 1302
BstDSI CCRYGG 1 cut(s) 972
BstENI CCTNNNNNAGG 1 cut(s) 330
BstF5I GGATG 2 cut(s) 572, 631
BstFNI CGCG 1 cut(s) 447
BstH2I RGCGCY 3 cut(s) 431, 537, 553
BstHHI GCGC 5 cut(s) 430, 447, 536, 552, 675
BstKTI GATC 6 cut(s) 325, 422, 642, 690, 706, 951
BstMAI GTCTC 6 cut(s) 505, 845, 973, 1088, 1262, 1388
BstMBI GATC 6 cut(s) 322, 419, 639, 687, 703, 948
BstMWI GCNNNNNNNGC 6 cut(s) 422, 453, 751, 789, 1157, 1312
BstNI CCWGG 1 cut(s) 1340
BstNSI RCATGY 3 cut(s) 375, 500, 736
BstSCI CCNGG 2 cut(s) 944, 1338
BstSFI CTRYAG 2 cut(s) 952, 1161
BstSLI GKGCMC 4 cut(s) 180, 366, 1218, 1233
BstSNI TACGTA 1 cut(s) 67
BstUI CGCG 1 cut(s) 447
BstV1I GCAGC 3 cut(s) 176, 429, 687
BstV2I GAAGAC 1 cut(s) 273
BstX2I RGATCY 3 cut(s) 419, 687, 948
BstYI RGATCY 3 cut(s) 419, 687, 948
BsuI GTATCC 1 cut(s) 1303
BsuRI GGCC 5 cut(s) 389, 695, 745, 855, 977
BtgI CCRYGG 1 cut(s) 972
BtgZI GCGATG 1 cut(s) 1296
BtrI CACGTC 1 cut(s) 352
BtsCI GGATG 2 cut(s) 572, 631
BtsI GCAGTG 1 cut(s) 11
BtsIMutI CAGTG 4 cut(s) 11, 576, 1178, 1362
Cac8I GCNNGC 4 cut(s) 373, 454, 538, 850
CaiI CAGNNNCTG 1 cut(s) 422
CfoI GCGC 5 cut(s) 430, 447, 536, 552, 675
Cfr13I GGNCC 3 cut(s) 388, 693, 854
CseI GACGC 3 cut(s) 458, 1036, 1357
Csp6I GTAC 4 cut(s) 43, 877, 1036, 1056
CspCI CAANNNNNGTGG 2 cut(s) 565, 600
CviQI GTAC 4 cut(s) 43, 877, 1036, 1056
DdeI CTNAG 3 cut(s) 376, 530, 1302
DinI GGCGCC 1 cut(s) 429
DpnI GATC 6 cut(s) 324, 421, 641, 689, 705, 950
DpnII GATC 6 cut(s) 322, 419, 639, 687, 703, 948
EaeI YGGCCR 1 cut(s) 975
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
Eco105I TACGTA 1 cut(s) 67
Eco130I CCWWGG 3 cut(s) 17, 819, 972
Eco24I GRGCYC 2 cut(s) 303, 1277
Eco31I GGTCTC 2 cut(s) 1088, 1388
Eco88I CYCGRG 2 cut(s) 260, 359
EcoNI CCTNNNNNAGG 1 cut(s) 330
EcoO109I RGGNCCY 1 cut(s) 388
EcoRI GAATTC 3 cut(s) 1063, 1154, 1166
EcoRII CCWGG 1 cut(s) 1338
EcoT14I CCWWGG 3 cut(s) 17, 819, 972
EcoT22I ATGCAT 1 cut(s) 373
EcoT38I GRGCYC 2 cut(s) 303, 1277
EgeI GGCGCC 1 cut(s) 429
EheI GGCGCC 1 cut(s) 429
ErhI CCWWGG 3 cut(s) 17, 819, 972
FaqI GGGAC 3 cut(s) 178, 183, 1222
FauI CCCGC 4 cut(s) 155, 399, 545, 1299
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 5 cut(s) 190, 426, 443, 676, 853
FokI GGATG 2 cut(s) 559, 638
FriOI GRGCYC 2 cut(s) 303, 1277
Fsp4HI GCNGC 5 cut(s) 190, 426, 443, 676, 853
FspBI CTAG 4 cut(s) 906, 1068, 1242, 1269
GlaI GCGC 5 cut(s) 429, 446, 535, 551, 674
GluI GCNGC 5 cut(s) 190, 426, 443, 676, 853
GsuI CTGGAG 3 cut(s) 267, 688, 1131
HaeII RGCGCY 3 cut(s) 431, 537, 553
HaeIII GGCC 5 cut(s) 389, 695, 745, 855, 977
HapII CCGG 3 cut(s) 108, 946, 981
HgaI GACGC 3 cut(s) 458, 1036, 1357
HhaI GCGC 5 cut(s) 430, 447, 536, 552, 675
Hin1I GRCGYC 3 cut(s) 428, 450, 1368
Hin6I GCGC 5 cut(s) 428, 445, 534, 550, 673
HinP1I GCGC 5 cut(s) 428, 445, 534, 550, 673
HincII GTYRAC 2 cut(s) 925, 994
HindII GTYRAC 2 cut(s) 925, 994
HindIII AAGCTT 1 cut(s) 752
HinfI GANTC 7 cut(s) 85, 124, 590, 698, 941, 1089, 1255
HpaI GTTAAC 2 cut(s) 925, 994
HpaII CCGG 3 cut(s) 108, 946, 981
HphI GGTGA 3 cut(s) 16, 122, 1258
Hpy166II GTNNAC 7 cut(s) 7, 178, 307, 925, 994, 1216, 1360
Hpy188I TCNGA 6 cut(s) 223, 341, 639, 703, 869, 1195
Hpy188III TCNNGA 5 cut(s) 121, 667, 707, 1004, 1093
Hpy8I GTNNAC 7 cut(s) 7, 178, 307, 925, 994, 1216, 1360
Hpy99I CGWCG 2 cut(s) 452, 869
HpyAV CCTTC 2 cut(s) 514, 1124
HpyCH4III ACNGT 3 cut(s) 713, 1213, 1333
HpyCH4IV ACGT 4 cut(s) 66, 351, 582, 921
HpyCH4V TGCA 8 cut(s) 82, 178, 288, 371, 416, 565, 1127, 1216
HpyF10VI GCNNNNNNNGC 6 cut(s) 422, 453, 751, 789, 1157, 1312
HpyF3I CTNAG 3 cut(s) 376, 530, 1302
HpySE526I ACGT 4 cut(s) 66, 351, 582, 921
Hsp92I GRCGYC 3 cut(s) 428, 450, 1368
HspAI GCGC 5 cut(s) 428, 445, 534, 550, 673
KasI GGCGCC 1 cut(s) 427
KspAI GTTAAC 2 cut(s) 925, 994
Kzo9I GATC 6 cut(s) 322, 419, 639, 687, 703, 948
LmnI GCTCC 3 cut(s) 248, 439, 909
Lsp1109I GCAGC 3 cut(s) 176, 429, 687
LweI GCATC 2 cut(s) 176, 976
MaeI CTAG 4 cut(s) 906, 1068, 1242, 1269
MaeII ACGT 4 cut(s) 66, 351, 582, 921
MaeIII GTNAC 2 cut(s) 713, 1333
MalI GATC 6 cut(s) 324, 421, 641, 689, 705, 950
MboI GATC 6 cut(s) 322, 419, 639, 687, 703, 948
MboII GAAGA 4 cut(s) 86, 125, 278, 1019
MflI RGATCY 3 cut(s) 419, 687, 948
MhlI GDGCHC 7 cut(s) 180, 221, 303, 366, 1218, 1233, 1277
MlsI TGGCCA 1 cut(s) 977
MluCI AATT 8 cut(s) 566, 682, 799, 1063, 1154, 1166, 1202, 1372
MluNI TGGCCA 1 cut(s) 977
Mly113I GGCGCC 1 cut(s) 428
MlyI GAGTC 4 cut(s) 133, 692, 935, 1264
MmeI TCCRAC 2 cut(s) 565, 847
Mox20I TGGCCA 1 cut(s) 977
Mph1103I ATGCAT 1 cut(s) 373
MscI TGGCCA 1 cut(s) 977
MseI TTAA 5 cut(s) 458, 546, 750, 924, 993
MslI CAYNNNNRTG 1 cut(s) 884
Msp20I TGGCCA 1 cut(s) 977
MspA1I CMGCKG 1 cut(s) 1306
MspI CCGG 3 cut(s) 108, 946, 981
MspR9I CCNGG 2 cut(s) 946, 1340
MvaI CCWGG 1 cut(s) 1340
MvnI CGCG 1 cut(s) 447
MwoI GCNNNNNNNGC 6 cut(s) 422, 453, 751, 789, 1157, 1312
NarI GGCGCC 1 cut(s) 428
NciI CCSGG 1 cut(s) 946
NcoI CCATGG 1 cut(s) 972
NdeII GATC 6 cut(s) 322, 419, 639, 687, 703, 948
NlaIV GGNNCC 2 cut(s) 390, 429
NsiI ATGCAT 1 cut(s) 373
NspI RCATGY 3 cut(s) 375, 500, 736
PaeI GCATGC 1 cut(s) 375
PciI ACATGT 1 cut(s) 732
PfeI GAWTC 3 cut(s) 85, 590, 1089
PflMI CCANNNNNTGG 1 cut(s) 1345
PfoI TCCNGGA 1 cut(s) 944
PkrI GCNGC 5 cut(s) 191, 427, 444, 677, 854
PleI GAGTC 4 cut(s) 132, 692, 935, 1263
PluTI GGCGCC 1 cut(s) 431
PpsI GAGTC 4 cut(s) 132, 692, 935, 1263
Ppu21I YACGTR 1 cut(s) 67
PscI ACATGT 1 cut(s) 732
Psp1406I AACGTT 1 cut(s) 921
Psp6I CCWGG 1 cut(s) 1338
PspGI CCWGG 1 cut(s) 1338
PspN4I GGNNCC 2 cut(s) 390, 429
PspPI GGNCC 3 cut(s) 388, 693, 854
PsrI GAACNNNNNNTAC 2 cut(s) 122, 154
PstNI CAGNNNCTG 1 cut(s) 422
PsuI RGATCY 3 cut(s) 419, 687, 948
RsaI GTAC 4 cut(s) 44, 878, 1037, 1057
RsaNI GTAC 4 cut(s) 43, 877, 1036, 1056
RseI CAYNNNNRTG 1 cut(s) 884
SaqAI TTAA 5 cut(s) 458, 546, 750, 924, 993
SatI GCNGC 5 cut(s) 190, 426, 443, 676, 853
Sau3AI GATC 6 cut(s) 322, 419, 639, 687, 703, 948
Sau96I GGNCC 3 cut(s) 388, 693, 854
SchI GAGTC 4 cut(s) 133, 692, 935, 1264
ScrFI CCNGG 2 cut(s) 946, 1340
SduI GDGCHC 7 cut(s) 180, 221, 303, 366, 1218, 1233, 1277
SfaNI GCATC 2 cut(s) 176, 976
SfcI CTRYAG 2 cut(s) 952, 1161
SfoI GGCGCC 1 cut(s) 429
SmiMI CAYNNNNRTG 1 cut(s) 884
SmlI CTYRAG 4 cut(s) 58, 98, 330, 1002
SmoI CTYRAG 4 cut(s) 58, 98, 330, 1002
SnaBI TACGTA 1 cut(s) 67
SphI GCATGC 1 cut(s) 375
Sse9I AATT 8 cut(s) 566, 682, 799, 1063, 1154, 1166, 1202, 1372
SsiI CCGC 7 cut(s) 162, 392, 425, 538, 781, 852, 1306
SspDI GGCGCC 1 cut(s) 427
SspMI CTAG 4 cut(s) 906, 1068, 1242, 1269
StyD4I CCNGG 2 cut(s) 944, 1338
StyI CCWWGG 3 cut(s) 17, 819, 972
TaaI ACNGT 3 cut(s) 713, 1213, 1333
TaiI ACGT 4 cut(s) 69, 354, 585, 924
TaqI TCGA 3 cut(s) 297, 346, 1092
TasI AATT 8 cut(s) 566, 682, 799, 1063, 1154, 1166, 1202, 1372
TatI WGTACW 1 cut(s) 42
TauI GCSGC 2 cut(s) 428, 855
TfiI GAWTC 3 cut(s) 85, 590, 1089
Tru1I TTAA 5 cut(s) 458, 546, 750, 924, 993
Tru9I TTAA 5 cut(s) 458, 546, 750, 924, 993
TscAI CASTG 4 cut(s) 18, 583, 1178, 1369
TseI GCWGC 3 cut(s) 189, 442, 675
TspDTI ATGAA 3 cut(s) 77, 270, 1094
TspRI CASTG 4 cut(s) 18, 583, 1178, 1369
Van91I CCANNNNNTGG 1 cut(s) 1345
VneI GTGCAC 2 cut(s) 176, 1214
XagI CCTNNNNNAGG 1 cut(s) 330
XapI RAATTY 3 cut(s) 1063, 1154, 1166
XceI RCATGY 3 cut(s) 375, 500, 736
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 4 cut(s) 906, 1068, 1242, 1269
Zsp2I ATGCAT 1 cut(s) 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.