Rmu_co8467587.1_g000001

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8467587.1
OG0000217
Physical Location & Seq
Forward (+)
1 .. 1404
1404 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8467587.1_g000001.1.cds

Sequence Viewer

Length: 1404 bp
gccaatactgggacgggactagtccatataaggtgctcccagaacagaaagttcctgcgaacgagaattgagggtgatgtgtacgtttctccggaggctgatgaaccagaggaggagcaatccaaatggtcgtgcacactatttgaggctcaagtagctgtagatggcaaccccgacaaagcccggttgttccatgtccaagcaaagcgatatgcaacggtattggacgatggtggagtaaggttcttcaaattagatgacggtcagagtgatcagggtatcttcgatatcactgactggcagtcattggtgatattgccaaagcatgtggccttcaaagccagcaacaacctttaccttcagcttggggaaagtaatcagctcaggttcgtgtccaccgataaggggaatcctgcttcgtggttcgaagtgtccacagatggcgatggaatggtgaaaatcaagtgctacaagaacaattcctacctgaggttcggcggcagtgactacagcaactggatttttgctgacggaggcagcgcctcgaaacctcccaccttgtttttgccaatcaaggtcgacactagtgcggccgctctcaaatgcttgggcaacgacaaattttgcgccctacacacctatgagtatgattatacagacggtctgaacgcgcctgacagtagtaccagcatttcaaacttgtcacgctgggggctggaagagcttgttctctctaggagaatctataatgccgactttgaccttaagaatgccataatctacggcgagaccccggtcaccatggccaccgcaaacgccagcaacaacacctcagcagaaaacactgtggaattcaagtttgcatacaaggatggtaagagcagcacgtggaaggccagccactcgtggatggtaggcgtgagtgtctctgccagcttcaaaattccattcatcggcggtactgacgtcactgctcaagcagagtattccggatcctatgagtggggagagaccattacatccgaaaacacattggagaccacctacaaggctacagtgccggcaaacacttctatatctgtgagcctgatggcgaccaagggaacttgtgacgtgccttactcgtattatcagaaagacgtgctttataatggtaaatccgttatctataagaaggatgatggggtgtacacgggtgtcaattcatacaatttccgctacgagactacagcacggacagagccggtatctatagctgatttgctggacccgtcggccgaccctaccacagaacagatgttgccggacccatcggtcgaccccaccacagaacaaatgatacctgagcccgtaccgtctggatcaaccaccagggtgcaaaacaaggtcaaaaccatagcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

467

Amino Acids

51.47

Weight (kDa)

4.92

Isoelectric Point (pI)

29.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1149
AasI GACNNNNNNGTC 1 cut(s) 1313
AatII GACGTC 1 cut(s) 969
AccBSI CCGCTC 1 cut(s) 596
AccI GTMKAC 2 cut(s) 579, 1317
AccII CGCG 1 cut(s) 671
AccIII TCCGGA 2 cut(s) 91, 989
AciI CCGC 6 cut(s) 498, 590, 594, 810, 957, 1216
AclWI GGATC 3 cut(s) 987, 1000, 1369
AcoI YGGCCR 3 cut(s) 591, 804, 1275
AcsI RAATTY 3 cut(s) 620, 851, 942
AcuI CTGAAG 1 cut(s) 344
AcvI CACGTG 1 cut(s) 888
AcyI GRCGYC 1 cut(s) 966
AfaI GTAC 5 cut(s) 83, 685, 961, 1190, 1353
AfiI CCNNNNNNNGG 5 cut(s) 9, 405, 489, 953, 1002
AflII CTTAAG 1 cut(s) 764
AgsI TTSAA 5 cut(s) 250, 337, 696, 856, 940
AhdI GACNNNNNGTC 1 cut(s) 301
AhlI ACTAGT 2 cut(s) 19, 584
AjiI CACGTC 2 cut(s) 1114, 1141
AjnI CCWGG 1 cut(s) 1370
AleI CACNNNNGTG 1 cut(s) 1373
AluBI AGCT 7 cut(s) 158, 364, 382, 724, 936, 1256, 1400
AluI AGCT 7 cut(s) 158, 364, 382, 724, 936, 1256, 1400
Alw21I GWGCWC 2 cut(s) 38, 137
Alw26I GTCTC 5 cut(s) 782, 931, 1004, 1031, 1217
Alw44I GTGCAC 1 cut(s) 133
AlwI GGATC 3 cut(s) 987, 1000, 1369
AlwNI CAGNNNCTG 1 cut(s) 516
Aor13HI TCCGGA 2 cut(s) 91, 989
AoxI GGCC 5 cut(s) 330, 591, 804, 894, 1275
ApaLI GTGCAC 1 cut(s) 133
ApeKI GCWGC 2 cut(s) 537, 882
ApoI RAATTY 3 cut(s) 620, 851, 942
AspLEI GCGC 3 cut(s) 542, 629, 673
AspS9I GGNCC 2 cut(s) 1267, 1306
AsuC2I CCSGG 2 cut(s) 184, 794
AsuHPI GGTGA 4 cut(s) 86, 322, 466, 790
AsuII TTCGAA 1 cut(s) 426
AvaII GGWCC 2 cut(s) 1267, 1306
AxyI CCTNAGG 1 cut(s) 488
BaeGI GKGCMC 1 cut(s) 137
BaeI ACNNNNGTAYC 4 cut(s) 667, 700, 951, 984
BalI TGGCCA 1 cut(s) 806
BamHI GGATCC 1 cut(s) 992
BanII GRGCYC 1 cut(s) 1350
BauI CACGAG 1 cut(s) 904
BbrPI CACGTG 1 cut(s) 888
Bbv12I GWGCWC 2 cut(s) 38, 137
BbvCI CCTCAGC 1 cut(s) 832
BbvI GCAGC 2 cut(s) 549, 894
BccI CCATC 9 cut(s) 158, 224, 434, 440, 866, 904, 1084, 1175, 1318
BceAI ACGGC 1 cut(s) 799
BcgI CGANNNNNNTGC 2 cut(s) 569, 603
BciT130I CCWGG 1 cut(s) 1372
BclI TGATCA 1 cut(s) 271
BcnI CCSGG 2 cut(s) 184, 794
BcoDI GTCTC 5 cut(s) 782, 931, 1004, 1031, 1217
BcuI ACTAGT 2 cut(s) 19, 584
BfaI CTAG 3 cut(s) 20, 585, 735
BfmI CTRYAG 5 cut(s) 159, 508, 1053, 1227, 1251
BfoI RGCGCY 1 cut(s) 543
BfrI CTTAAG 1 cut(s) 764
BisI GCNGC 5 cut(s) 499, 538, 591, 594, 883
BlsI GCNGC 5 cut(s) 500, 539, 592, 595, 884
Bme1390I CCNGG 3 cut(s) 184, 794, 1372
Bme18I GGWCC 2 cut(s) 1267, 1306
BmeRI GACNNNNNGTC 1 cut(s) 301
BmgBI CACGTC 2 cut(s) 1114, 1141
BmgT120I GGNCC 2 cut(s) 1267, 1306
BmiI GGNNCC 3 cut(s) 994, 1269, 1308
BmrFI CCNGG 3 cut(s) 184, 794, 1372
BmrI ACTGGG 1 cut(s) 18
BmuI ACTGGG 1 cut(s) 18
BoxI GACNNNNGTC 1 cut(s) 794
Bpu10I CCTNAGC 3 cut(s) 383, 832, 1344
Bpu14I TTCGAA 1 cut(s) 426
BpuEI CTTGAG 2 cut(s) 135, 960
BpuMI CCSGG 2 cut(s) 184, 794
BsaAI YACGTR 1 cut(s) 888
BsaHI GRCGYC 1 cut(s) 966
BsaI GGTCTC 3 cut(s) 782, 1004, 1031
BsaJI CCNNGG 4 cut(s) 792, 801, 1098, 1371
BsaWI WCCGGW 2 cut(s) 91, 989
Bsc4I CCNNNNNNNGG 5 cut(s) 9, 405, 489, 953, 1002
Bse118I RCCGGY 2 cut(s) 1060, 1243
Bse1I ACTGG 3 cut(s) 13, 302, 521
Bse21I CCTNAGG 1 cut(s) 488
BseAI TCCGGA 2 cut(s) 91, 989
BseBI CCWGG 1 cut(s) 1372
BseDI CCNNGG 4 cut(s) 792, 801, 1098, 1371
BseGI GGATG 4 cut(s) 877, 915, 1019, 1183
BseLI CCNNNNNNNGG 5 cut(s) 9, 405, 489, 953, 1002
BseMII CTCAG 4 cut(s) 397, 479, 846, 1335
BseNI ACTGG 3 cut(s) 13, 302, 521
BseRI GAGGAG 2 cut(s) 125, 128
BseSI GKGCMC 1 cut(s) 137
BseX3I CGGCCG 2 cut(s) 591, 1275
BseXI GCAGC 2 cut(s) 549, 894
BseYI CCCAGC 1 cut(s) 708
Bsh1236I CGCG 1 cut(s) 671
Bsh1285I CGRYCG 3 cut(s) 594, 1278, 1317
BshFI GGCC 5 cut(s) 332, 593, 806, 896, 1277
BsiEI CGRYCG 3 cut(s) 594, 1278, 1317
BsiHKAI GWGCWC 2 cut(s) 38, 137
BsiSI CCGG 7 cut(s) 92, 184, 794, 990, 1061, 1244, 1304
BslFI GGGAC 2 cut(s) 25, 30
BslI CCNNNNNNNGG 5 cut(s) 9, 405, 489, 953, 1002
BsmAI GTCTC 5 cut(s) 782, 931, 1004, 1031, 1217
BsmFI GGGAC 2 cut(s) 25, 30
BsmI GAATGC 1 cut(s) 775
BsnI GGCC 5 cut(s) 332, 593, 806, 896, 1277
Bso31I GGTCTC 3 cut(s) 782, 1004, 1031
Bsp119I TTCGAA 1 cut(s) 426
Bsp1286I GDGCHC 3 cut(s) 38, 137, 1350
Bsp13I TCCGGA 2 cut(s) 91, 989
Bsp1407I TGTACA 1 cut(s) 1188
Bsp143I GATC 3 cut(s) 271, 992, 1361
Bsp19I CCATGG 1 cut(s) 801
BspACI CCGC 6 cut(s) 498, 590, 594, 810, 957, 1216
BspANI GGCC 5 cut(s) 332, 593, 806, 896, 1277
BspCNI CTCAG 4 cut(s) 396, 480, 845, 1336
BspEI TCCGGA 2 cut(s) 91, 989
BspFNI CGCG 1 cut(s) 671
BspLI GGNNCC 3 cut(s) 994, 1269, 1308
BspPI GGATC 3 cut(s) 987, 1000, 1369
BspQI GCTCTTC 1 cut(s) 714
BspT104I TTCGAA 1 cut(s) 426
BspTI CTTAAG 1 cut(s) 764
BspTNI GGTCTC 3 cut(s) 782, 1004, 1031
BsrBI CCGCTC 1 cut(s) 596
BsrFI RCCGGY 2 cut(s) 1060, 1243
BsrGI TGTACA 1 cut(s) 1188
BsrI ACTGG 3 cut(s) 13, 302, 521
BssAI RCCGGY 2 cut(s) 1060, 1243
BssECI CCNNGG 4 cut(s) 792, 801, 1098, 1371
BssMI GATC 3 cut(s) 271, 992, 1361
BssNI GRCGYC 1 cut(s) 966
BssSI CACGAG 1 cut(s) 904
BssT1I CCWWGG 2 cut(s) 801, 1098
Bst2BI CACGAG 1 cut(s) 904
Bst2UI CCWGG 1 cut(s) 1372
Bst4CI ACNGT 7 cut(s) 220, 263, 662, 680, 847, 1057, 1356
Bst6I CTCTTC 1 cut(s) 714
BstACI GRCGYC 1 cut(s) 966
BstAFI CTTAAG 1 cut(s) 764
BstAUI TGTACA 1 cut(s) 1188
BstBAI YACGTR 1 cut(s) 888
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 5 cut(s) 343, 820, 898, 934, 1062
BstDEI CTNAG 4 cut(s) 383, 488, 832, 1344
BstDSI CCRYGG 1 cut(s) 801
BstEII GGTNACC 1 cut(s) 796
BstENI CCTNNNNNAGG 1 cut(s) 487
BstF5I GGATG 4 cut(s) 877, 915, 1019, 1183
BstFNI CGCG 1 cut(s) 671
BstH2I RGCGCY 1 cut(s) 543
BstHHI GCGC 3 cut(s) 542, 629, 673
BstKTI GATC 3 cut(s) 274, 995, 1364
BstMAI GTCTC 5 cut(s) 782, 931, 1004, 1031, 1217
BstMBI GATC 3 cut(s) 271, 992, 1361
BstMCI CGRYCG 3 cut(s) 594, 1278, 1317
BstMWI GCNNNNNNNGC 3 cut(s) 155, 338, 721
BstNI CCWGG 1 cut(s) 1372
BstNSI RCATGY 1 cut(s) 329
BstPAI GACNNNNGTC 1 cut(s) 794
BstPI GGTNACC 1 cut(s) 796
BstSCI CCNGG 3 cut(s) 182, 792, 1370
BstSFI CTRYAG 5 cut(s) 159, 508, 1053, 1227, 1251
BstSLI GKGCMC 1 cut(s) 137
BstUI CGCG 1 cut(s) 671
BstV1I GCAGC 2 cut(s) 549, 894
BstX2I RGATCY 1 cut(s) 992
BstYI RGATCY 1 cut(s) 992
BstZI CGGCCG 2 cut(s) 591, 1275
Bsu36I CCTNAGG 1 cut(s) 488
BsuRI GGCC 5 cut(s) 332, 593, 806, 896, 1277
BtgI CCRYGG 1 cut(s) 801
BtgZI GCGATG 1 cut(s) 459
BtrI CACGTC 2 cut(s) 1114, 1141
BtsCI GGATG 4 cut(s) 877, 915, 1019, 1183
BtsI GCAGTG 2 cut(s) 508, 969
BtsIMutI CAGTG 5 cut(s) 291, 508, 843, 969, 1062
Cac8I GCNNGC 5 cut(s) 343, 820, 898, 934, 1062
CaiI CAGNNNCTG 1 cut(s) 516
CciNI GCGGCCGC 1 cut(s) 591
CfoI GCGC 3 cut(s) 542, 629, 673
Cfr10I RCCGGY 2 cut(s) 1060, 1243
Cfr13I GGNCC 2 cut(s) 1267, 1306
Csp6I GTAC 5 cut(s) 82, 684, 960, 1189, 1352
CspCI CAANNNNNGTGG 2 cut(s) 309, 344
CviAII CATG 3 cut(s) 194, 326, 802
CviQI GTAC 5 cut(s) 82, 684, 960, 1189, 1352
DdeI CTNAG 4 cut(s) 383, 488, 832, 1344
DpnI GATC 3 cut(s) 273, 994, 1363
DpnII GATC 3 cut(s) 271, 992, 1361
DrdI GACNNNNNNGTC 1 cut(s) 1313
DriI GACNNNNNGTC 1 cut(s) 301
DseDI GACNNNNNNGTC 1 cut(s) 1313
EaeI YGGCCR 3 cut(s) 591, 804, 1275
EagI CGGCCG 2 cut(s) 591, 1275
Eam1104I CTCTTC 1 cut(s) 714
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 1 cut(s) 714
EclXI CGGCCG 2 cut(s) 591, 1275
Eco130I CCWWGG 2 cut(s) 801, 1098
Eco24I GRGCYC 1 cut(s) 1350
Eco31I GGTCTC 3 cut(s) 782, 1004, 1031
Eco32I GATATC 1 cut(s) 289
Eco47I GGWCC 2 cut(s) 1267, 1306
Eco52I CGGCCG 2 cut(s) 591, 1275
Eco57I CTGAAG 1 cut(s) 344
Eco72I CACGTG 1 cut(s) 888
Eco81I CCTNAGG 1 cut(s) 488
Eco91I GGTNACC 1 cut(s) 796
EcoNI CCTNNNNNAGG 1 cut(s) 487
EcoO65I GGTNACC 1 cut(s) 796
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 1 cut(s) 1370
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 2 cut(s) 801, 1098
EcoT38I GRGCYC 1 cut(s) 1350
ErhI CCWWGG 2 cut(s) 801, 1098
FaeI CATG 3 cut(s) 197, 329, 805
FalI AAGNNNNNCTT 2 cut(s) 1128, 1160
FaqI GGGAC 2 cut(s) 25, 30
FatI CATG 3 cut(s) 193, 325, 801
FbaI TGATCA 1 cut(s) 271
FblI GTMKAC 2 cut(s) 579, 1317
Fnu4HI GCNGC 5 cut(s) 499, 538, 591, 594, 883
FokI GGATG 4 cut(s) 884, 922, 1006, 1190
FriOI GRGCYC 1 cut(s) 1350
Fsp4HI GCNGC 5 cut(s) 499, 538, 591, 594, 883
FspBI CTAG 3 cut(s) 20, 585, 735
GlaI GCGC 3 cut(s) 541, 628, 672
GluI GCNGC 5 cut(s) 499, 538, 591, 594, 883
GsaI CCCAGC 1 cut(s) 712
HaeII RGCGCY 1 cut(s) 543
HaeIII GGCC 5 cut(s) 332, 593, 806, 896, 1277
HapII CCGG 7 cut(s) 92, 184, 794, 990, 1061, 1244, 1304
HhaI GCGC 3 cut(s) 542, 629, 673
Hin1I GRCGYC 1 cut(s) 966
Hin1II CATG 3 cut(s) 197, 329, 805
Hin6I GCGC 3 cut(s) 540, 627, 671
HinP1I GCGC 3 cut(s) 540, 627, 671
HincII GTYRAC 2 cut(s) 580, 1318
HindII GTYRAC 2 cut(s) 580, 1318
HinfI GANTC 2 cut(s) 409, 741
HpaII CCGG 7 cut(s) 92, 184, 794, 990, 1061, 1244, 1304
HphI GGTGA 4 cut(s) 86, 322, 466, 790
Hpy166II GTNNAC 8 cut(s) 82, 135, 396, 435, 580, 1189, 1191, 1318
Hpy188I TCNGA 4 cut(s) 267, 666, 1024, 1134
Hpy188III TCNNGA 3 cut(s) 92, 990, 1359
Hpy8I GTNNAC 8 cut(s) 82, 135, 396, 435, 580, 1189, 1191, 1318
Hpy99I CGWCG 1 cut(s) 1276
HpyAV CCTTC 4 cut(s) 343, 368, 886, 1168
HpyCH4III ACNGT 7 cut(s) 220, 263, 662, 680, 847, 1057, 1356
HpyCH4IV ACGT 5 cut(s) 84, 887, 966, 1113, 1140
HpyCH4V TGCA 4 cut(s) 135, 215, 863, 1378
HpyF10VI GCNNNNNNNGC 3 cut(s) 155, 338, 721
HpyF3I CTNAG 4 cut(s) 383, 488, 832, 1344
HpySE526I ACGT 5 cut(s) 84, 887, 966, 1113, 1140
Hsp92I GRCGYC 1 cut(s) 966
Hsp92II CATG 3 cut(s) 197, 329, 805
HspAI GCGC 3 cut(s) 540, 627, 671
Kpn2I TCCGGA 2 cut(s) 91, 989
KroI GCCGGC 1 cut(s) 1060
KroNI GCCGGC 1 cut(s) 1062
Ksp22I TGATCA 1 cut(s) 271
Kzo9I GATC 3 cut(s) 271, 992, 1361
LguI GCTCTTC 1 cut(s) 714
LmnI GCTCC 2 cut(s) 41, 115
Lsp1109I GCAGC 2 cut(s) 549, 894
MaeI CTAG 3 cut(s) 20, 585, 735
MaeII ACGT 5 cut(s) 84, 887, 966, 1113, 1140
MaeIII GTNAC 5 cut(s) 503, 702, 796, 967, 1109
MalI GATC 3 cut(s) 273, 994, 1363
MbiI CCGCTC 1 cut(s) 596
MboI GATC 3 cut(s) 271, 992, 1361
MboII GAAGA 3 cut(s) 238, 274, 731
MflI RGATCY 1 cut(s) 992
MhlI GDGCHC 3 cut(s) 38, 137, 1350
MlsI TGGCCA 1 cut(s) 806
MluCI AATT 8 cut(s) 66, 251, 478, 620, 851, 942, 1201, 1210
MluNI TGGCCA 1 cut(s) 806
Mox20I TGGCCA 1 cut(s) 806
MroI TCCGGA 2 cut(s) 91, 989
MroNI GCCGGC 1 cut(s) 1060
MscI TGGCCA 1 cut(s) 806
MseI TTAA 1 cut(s) 765
MslI CAYNNNNRTG 2 cut(s) 639, 1373
Msp20I TGGCCA 1 cut(s) 806
MspCI CTTAAG 1 cut(s) 764
MspI CCGG 7 cut(s) 92, 184, 794, 990, 1061, 1244, 1304
MspR9I CCNGG 3 cut(s) 184, 794, 1372
Mva1269I GAATGC 1 cut(s) 775
MvaI CCWGG 1 cut(s) 1372
MvnI CGCG 1 cut(s) 671
MwoI GCNNNNNNNGC 3 cut(s) 155, 338, 721
NaeI GCCGGC 1 cut(s) 1062
NciI CCSGG 2 cut(s) 184, 794
NcoI CCATGG 1 cut(s) 801
NdeII GATC 3 cut(s) 271, 992, 1361
NgoMIV GCCGGC 1 cut(s) 1060
NlaIII CATG 3 cut(s) 197, 329, 805
NlaIV GGNNCC 3 cut(s) 994, 1269, 1308
NmuCI GTSAC 5 cut(s) 503, 702, 796, 967, 1109
NotI GCGGCCGC 1 cut(s) 591
NspI RCATGY 1 cut(s) 329
NspV TTCGAA 1 cut(s) 426
OliI CACNNNNGTG 1 cut(s) 1373
PciSI GCTCTTC 1 cut(s) 714
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PctI GAATGC 1 cut(s) 775
PdiI GCCGGC 1 cut(s) 1062
PfeI GAWTC 2 cut(s) 409, 741
PkrI GCNGC 5 cut(s) 500, 539, 592, 595, 884
PmaCI CACGTG 1 cut(s) 888
PmlI CACGTG 1 cut(s) 888
Ppu21I YACGTR 1 cut(s) 888
PshAI GACNNNNGTC 1 cut(s) 794
PsiI TTATAA 1 cut(s) 1149
Psp6I CCWGG 1 cut(s) 1370
PspCI CACGTG 1 cut(s) 888
PspEI GGTNACC 1 cut(s) 796
PspFI CCCAGC 1 cut(s) 708
PspGI CCWGG 1 cut(s) 1370
PspN4I GGNNCC 3 cut(s) 994, 1269, 1308
PspPI GGNCC 2 cut(s) 1267, 1306
PsrI GAACNNNNNNTAC 4 cut(s) 467, 499, 1323, 1355
PstNI CAGNNNCTG 1 cut(s) 516
PsuI RGATCY 1 cut(s) 992
RsaI GTAC 5 cut(s) 83, 685, 961, 1190, 1353
RsaNI GTAC 5 cut(s) 82, 684, 960, 1189, 1352
RseI CAYNNNNRTG 2 cut(s) 639, 1373
SalI GTCGAC 2 cut(s) 578, 1316
SapI GCTCTTC 1 cut(s) 714
SaqAI TTAA 1 cut(s) 765
SatI GCNGC 5 cut(s) 499, 538, 591, 594, 883
Sau3AI GATC 3 cut(s) 271, 992, 1361
Sau96I GGNCC 2 cut(s) 1267, 1306
ScrFI CCNGG 3 cut(s) 184, 794, 1372
SduI GDGCHC 3 cut(s) 38, 137, 1350
SfcI CTRYAG 5 cut(s) 159, 508, 1053, 1227, 1251
SfuI TTCGAA 1 cut(s) 426
SinI GGWCC 2 cut(s) 1267, 1306
SmiMI CAYNNNNRTG 2 cut(s) 639, 1373
SmlI CTYRAG 3 cut(s) 150, 764, 975
SmoI CTYRAG 3 cut(s) 150, 764, 975
SpeI ACTAGT 2 cut(s) 19, 584
Sse9I AATT 8 cut(s) 66, 251, 478, 620, 851, 942, 1201, 1210
SsiI CCGC 6 cut(s) 498, 590, 594, 810, 957, 1216
SspMI CTAG 3 cut(s) 20, 585, 735
StyD4I CCNGG 3 cut(s) 182, 792, 1370
StyI CCWWGG 2 cut(s) 801, 1098
TaaI ACNGT 7 cut(s) 220, 263, 662, 680, 847, 1057, 1356
TaiI ACGT 5 cut(s) 87, 890, 969, 1116, 1143
TaqI TCGA 5 cut(s) 285, 426, 545, 579, 1317
TaqII GACCGA 1 cut(s) 1303
TasI AATT 8 cut(s) 66, 251, 478, 620, 851, 942, 1201, 1210
TatI WGTACW 1 cut(s) 1188
TauI GCSGC 3 cut(s) 501, 593, 596
TfiI GAWTC 2 cut(s) 409, 741
Tru1I TTAA 1 cut(s) 765
Tru9I TTAA 1 cut(s) 765
TscAI CASTG 5 cut(s) 298, 508, 850, 976, 1062
TseFI GTSAC 5 cut(s) 503, 702, 796, 967, 1109
TseI GCWGC 2 cut(s) 537, 882
Tsp45I GTSAC 5 cut(s) 503, 702, 796, 967, 1109
TspDTI ATGAA 3 cut(s) 117, 940, 1194
TspGWI ACGGA 3 cut(s) 546, 1150, 1249
TspRI CASTG 5 cut(s) 298, 508, 850, 976, 1062
Vha464I CTTAAG 1 cut(s) 764
VneI GTGCAC 1 cut(s) 133
VpaK11BI GGWCC 2 cut(s) 1267, 1306
XagI CCTNNNNNAGG 1 cut(s) 487
XapI RAATTY 3 cut(s) 620, 851, 942
XceI RCATGY 1 cut(s) 329
XmiI GTMKAC 2 cut(s) 579, 1317
XspI CTAG 3 cut(s) 20, 585, 735
ZraI GACGTC 1 cut(s) 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.