Rh2CG553700

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000217
Physical Location & Seq
Forward (+)
73254784 .. 73256403
1620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG553700.1

Sequence Viewer

Length: 1620 bp
ATGTCGTTCCTATTACCACCCACTATTGCCCTCAGTTCAGTCTGGTTCTTTAGATTCGACGACTCCTACTTGATCTACAGGAATGATTCTGAATCTGAGACGCGTGGCTTTCTCAGAGTCAACGGAGCGAATGTCTTCAGCCCATTAGCAAAGTTTGAAGTGGTGACGGCCAATACTGGGACTGGACTAGTACATATCAGATGCTCTCAGAACAGGAAGTTCCTGCGAAGGAGATTTGAGAGTGATGTGCACCTTACTCCGGAGGCTGATGAACCAGAGGAGGACCAATCCAAATGGTCGTGTACATTATTTGAGCCTCAAGTTGCTGAAGATGGCAACCCCGACAGAGCCCGGTTGCTCCATGTCCAATCAAAAGAATATGCAACGGCATGGGACATAGGAGGAGCAGTAAGGGTCTTGAGGTTAATTGTTGCGCAGAATCAACAGAATATCTTTGATATCATCGACTTGGAGTCATTGGTGATATTGCCAAAGCATGTGGCTTTCAAAGGTGACAACGGCAATTACCTTATGGCGGAAGCTACGACAACGTCGAACCCGACCTTCTCGTCCACCGATAAAGGGATGCCTGAGTCGTGGTTCGAGGTCTCCACGGATGGCCATGGTAGGGTGCAAATCAAGTCATTCGACACCAACAGGTACCTGAGGAACGACGCTGGCCGCAACTGGATTTTGGCTGACTCAGCCGGCAACGCCACTGACCTGACTACCTTGTTTTGGCCAGTCAAGGTCGACACTAGTACGGTCGCTCTCAAAAGCTTGAGCAACAACAGATTTTGCTCCCGATACACCGACCTTGGTATAACAAGCGGTCTGAACGCAAGGCTGACCAGTATTACAGTACACTCACGCATGGCGCTGGAAGAGCTTGTTCTCTCTAGGACAATCTACAATACTGAATTCGACCTTGCCAATGCCATAATCTACGGCGAGACCCCGGTCACTATGGCCACCGCAAACGCCAGCAACAACACCTCAGCAGACAACACTGTGGAATTCAAGTTCGCGTACACGGAGAGTAAGAGCAGCACATGGAGCTCCAGCCACTCGTGGATGGTAGGCGTGAGTGTCACCGTCAGCTTAAGAATTCCATTCGGACTTGGCGGTGTTGAAAATACATATTCCGGGGAGTATAACGGATCCTACGAATGGGGAGAAACAATTACAACCGAAAACACATTGGAGACTACCTACACCGCCACTGTGCCGGCAAACACTTCTATATCTGTGAGTCTGATGGCGACCAAGGGATATTCCGACGTGCCTTACTCTTACTATCAGCGAGACGTGCTTTATAACGGTAAAACCGTTGTCTATAAGAAGGATGATGGGTTGTATACGGGAATAAATTCATACAACTTCCACTACGTGGTTACAACTCTGAGAGAACCAGAATCTAGAGCTGATTTGTCGACCAGAGAGCAGCAGTTGCCTGACCCATCCGTCGATCCGTCCAAACAACAAATACTACCTATGCCTGTGCTGTCTGGATCAATCACCAGAGTGCAAAACAATGTGACCTCGACCACCACCCTGGAACAAGAGTTGTCAAAGCTGGGATTAGAAGATGCAGCAGGTCGATCTGCCACGAAAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

539

Amino Acids

59.94

Weight (kDa)

5.13

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 21 - 155 8.8e-18 Agglutinin domain
Aerolysin PF01117 307 - 432 2.9e-06 Aerolysin toxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1317
AasI GACNNNNNNGTC 2 cut(s) 568, 1463
Acc16I TGCGCA 1 cut(s) 435
Acc36I ACCTGC 1 cut(s) 1586
Acc65I GGTACC 1 cut(s) 660
AccB1I GGYRCC 1 cut(s) 660
AccB7I CCANNNNNTGG 1 cut(s) 1390
AccI GTMKAC 3 cut(s) 753, 1358, 1433
AccII CGCG 2 cut(s) 103, 1028
AccIII TCCGGA 1 cut(s) 259
AciI CCGC 6 cut(s) 536, 682, 831, 975, 1125, 1218
AclWI GGATC 4 cut(s) 1155, 1168, 1463, 1519
AcoI YGGCCR 5 cut(s) 168, 619, 679, 740, 969
AcsI RAATTY 4 cut(s) 920, 1016, 1107, 1369
AcuI CTGAAG 2 cut(s) 121, 348
AdeI CACNNNGTG 1 cut(s) 1390
AfaI GTAC 6 cut(s) 192, 304, 662, 763, 864, 1031
AfiI CCNNNNNNNGG 8 cut(s) 177, 259, 535, 582, 628, 738, 1170, 1390
AflII CTTAAG 1 cut(s) 1102
AflIII ACRYGT 1 cut(s) 101
AgsI TTSAA 4 cut(s) 158, 508, 1021, 1133
AhdI GACNNNNNGTC 1 cut(s) 472
AhlI ACTAGT 2 cut(s) 187, 758
AjiI CACGTC 2 cut(s) 1282, 1309
AjnI CCWGG 1 cut(s) 1554
AleI CACNNNNGTG 1 cut(s) 1523
AloI GAACNNNNNNTCC 2 cut(s) 1007, 1039
AluBI AGCT 7 cut(s) 542, 780, 889, 1059, 1101, 1424, 1576
AluI AGCT 7 cut(s) 542, 780, 889, 1059, 1101, 1424, 1576
Alw21I GWGCWC 2 cut(s) 252, 1061
Alw26I GTCTC 5 cut(s) 92, 613, 947, 1199, 1299
Alw44I GTGCAC 1 cut(s) 248
AlwI GGATC 4 cut(s) 1155, 1168, 1463, 1519
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 5 cut(s) 168, 619, 679, 740, 969
ApaLI GTGCAC 1 cut(s) 248
ApeKI GCWGC 3 cut(s) 1047, 1444, 1592
ApoI RAATTY 4 cut(s) 920, 1016, 1107, 1369
Asp700I GAANNNNTTC 2 cut(s) 134, 1369
Asp718I GGTACC 1 cut(s) 660
AspLEI GCGC 2 cut(s) 436, 880
AspS9I GGNCC 1 cut(s) 283
AsuC2I CCSGG 3 cut(s) 352, 959, 1147
AsuHPI GGTGA 5 cut(s) 175, 493, 524, 1084, 1510
AvaII GGWCC 1 cut(s) 283
AxyI CCTNAGG 1 cut(s) 665
BaeGI GKGCMC 1 cut(s) 252
BalI TGGCCA 3 cut(s) 621, 742, 971
BamHI GGATCC 1 cut(s) 1160
BanI GGYRCC 1 cut(s) 660
BanII GRGCYC 2 cut(s) 352, 1061
BauI CACGAG 1 cut(s) 1069
BbsI GAAGAC 1 cut(s) 127
Bbv12I GWGCWC 2 cut(s) 252, 1061
BbvCI CCTCAGC 1 cut(s) 997
BbvI GCAGC 3 cut(s) 1059, 1456, 1604
BccI CCATC 6 cut(s) 326, 611, 1069, 1252, 1343, 1468
BceAI ACGGC 4 cut(s) 183, 402, 535, 964
BciT130I CCWGG 1 cut(s) 1556
BcnI CCSGG 3 cut(s) 352, 959, 1147
BcoDI GTCTC 5 cut(s) 92, 613, 947, 1199, 1299
BcuI ACTAGT 2 cut(s) 187, 758
BfaI CTAG 4 cut(s) 188, 759, 900, 1419
BfmI CTRYAG 1 cut(s) 76
BfoI RGCGCY 1 cut(s) 881
BfrI CTTAAG 1 cut(s) 1102
BfuAI ACCTGC 1 cut(s) 1586
BisI GCNGC 4 cut(s) 682, 1048, 1445, 1593
BlsI GCNGC 4 cut(s) 683, 1049, 1446, 1594
Bme1390I CCNGG 4 cut(s) 352, 959, 1147, 1556
Bme18I GGWCC 1 cut(s) 283
BmeRI GACNNNNNGTC 1 cut(s) 472
BmgBI CACGTC 2 cut(s) 1282, 1309
BmgT120I GGNCC 1 cut(s) 283
BmiI GGNNCC 2 cut(s) 662, 1162
BmrFI CCNGG 4 cut(s) 352, 959, 1147, 1556
BmrI ACTGGG 1 cut(s) 186
BmsI GCATC 3 cut(s) 191, 576, 1579
BmuI ACTGGG 1 cut(s) 186
BoxI GACNNNNGTC 1 cut(s) 959
BpiI GAAGAC 1 cut(s) 127
BpmI CTGGAG 1 cut(s) 1045
Bpu10I CCTNAGC 1 cut(s) 997
BpuEI CTTGAG 3 cut(s) 303, 439, 802
BpuMI CCSGG 3 cut(s) 352, 959, 1147
BsaAI YACGTR 1 cut(s) 1390
BsaI GGTCTC 2 cut(s) 613, 947
BsaJI CCNNGG 7 cut(s) 612, 622, 817, 957, 1146, 1266, 1554
BsaWI WCCGGW 1 cut(s) 259
BsaXI ACNNNNNCTCC 4 cut(s) 117, 147, 393, 423
Bsc4I CCNNNNNNNGG 8 cut(s) 177, 259, 535, 582, 628, 738, 1170, 1390
Bse118I RCCGGY 2 cut(s) 707, 1228
Bse1I ACTGG 5 cut(s) 181, 187, 692, 743, 852
Bse21I CCTNAGG 1 cut(s) 665
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 1 cut(s) 1556
BseDI CCNNGG 7 cut(s) 612, 622, 817, 957, 1146, 1266, 1554
BseGI GGATG 5 cut(s) 591, 622, 1080, 1351, 1460
BseLI CCNNNNNNNGG 8 cut(s) 177, 259, 535, 582, 628, 738, 1170, 1390
BseMII CTCAG 9 cut(s) 46, 87, 127, 221, 582, 656, 717, 1011, 1394
BseNI ACTGG 5 cut(s) 181, 187, 692, 743, 852
BseRI GAGGAG 2 cut(s) 293, 417
BseSI GKGCMC 1 cut(s) 252
BseXI GCAGC 3 cut(s) 1059, 1456, 1604
BseYI CCCAGC 1 cut(s) 1576
Bsh1236I CGCG 2 cut(s) 103, 1028
Bsh1285I CGRYCG 1 cut(s) 768
BshFI GGCC 5 cut(s) 170, 621, 681, 742, 971
BshNI GGYRCC 1 cut(s) 660
BsiEI CGRYCG 1 cut(s) 768
BsiHKAI GWGCWC 2 cut(s) 252, 1061
BsiSI CCGG 6 cut(s) 260, 352, 708, 959, 1146, 1229
BslFI GGGAC 2 cut(s) 193, 407
BslI CCNNNNNNNGG 8 cut(s) 177, 259, 535, 582, 628, 738, 1170, 1390
BsmAI GTCTC 5 cut(s) 92, 613, 947, 1199, 1299
BsmBI CGTCTC 2 cut(s) 92, 1299
BsmFI GGGAC 2 cut(s) 193, 407
BsnI GGCC 5 cut(s) 170, 621, 681, 742, 971
Bso31I GGTCTC 2 cut(s) 613, 947
Bsp1286I GDGCHC 3 cut(s) 252, 352, 1061
Bsp13I TCCGGA 1 cut(s) 259
Bsp1407I TGTACA 1 cut(s) 302
Bsp143I GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
Bsp19I CCATGG 1 cut(s) 622
BspACI CCGC 6 cut(s) 536, 682, 831, 975, 1125, 1218
BspANI GGCC 5 cut(s) 170, 621, 681, 742, 971
BspCNI CTCAG 9 cut(s) 45, 88, 126, 220, 583, 657, 716, 1010, 1395
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 2 cut(s) 103, 1028
BspLI GGNNCC 2 cut(s) 662, 1162
BspMI ACCTGC 1 cut(s) 1586
BspPI GGATC 4 cut(s) 1155, 1168, 1463, 1519
BspQI GCTCTTC 1 cut(s) 879
BspT107I GGYRCC 1 cut(s) 660
BspTI CTTAAG 1 cut(s) 1102
BspTNI GGTCTC 2 cut(s) 613, 947
BsrFI RCCGGY 2 cut(s) 707, 1228
BsrGI TGTACA 1 cut(s) 302
BsrI ACTGG 5 cut(s) 181, 187, 692, 743, 852
BssAI RCCGGY 2 cut(s) 707, 1228
BssECI CCNNGG 7 cut(s) 612, 622, 817, 957, 1146, 1266, 1554
BssMI GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
BssNAI GTATAC 1 cut(s) 1359
BssSI CACGAG 1 cut(s) 1069
BssT1I CCWWGG 3 cut(s) 622, 817, 1266
Bst1107I GTATAC 1 cut(s) 1359
Bst2BI CACGAG 1 cut(s) 1069
Bst2UI CCWGG 1 cut(s) 1556
Bst4CI ACNGT 7 cut(s) 766, 862, 1012, 1096, 1225, 1322, 1330
Bst6I CTCTTC 1 cut(s) 879
BstAFI CTTAAG 1 cut(s) 1102
BstAPI GCANNNNNTGC 1 cut(s) 1450
BstAUI TGTACA 1 cut(s) 302
BstBAI YACGTR 1 cut(s) 1390
BstC8I GCNNGC 4 cut(s) 679, 709, 985, 1230
BstDSI CCRYGG 2 cut(s) 612, 622
BstF5I GGATG 5 cut(s) 591, 622, 1080, 1351, 1460
BstFNI CGCG 2 cut(s) 103, 1028
BstH2I RGCGCY 1 cut(s) 881
BstHHI GCGC 2 cut(s) 436, 880
BstKTI GATC 5 cut(s) 75, 1163, 1471, 1514, 1604
BstMAI GTCTC 5 cut(s) 92, 613, 947, 1199, 1299
BstMBI GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
BstMCI CGRYCG 1 cut(s) 768
BstMWI GCNNNNNNNGC 6 cut(s) 704, 713, 886, 1056, 1309, 1450
BstNI CCWGG 1 cut(s) 1556
BstNSI RCATGY 1 cut(s) 500
BstPAI GACNNNNGTC 1 cut(s) 959
BstSCI CCNGG 4 cut(s) 350, 957, 1145, 1554
BstSFI CTRYAG 1 cut(s) 76
BstSLI GKGCMC 1 cut(s) 252
BstUI CGCG 2 cut(s) 103, 1028
BstV1I GCAGC 3 cut(s) 1059, 1456, 1604
BstV2I GAAGAC 1 cut(s) 127
BstX2I RGATCY 1 cut(s) 1160
BstXI CCANNNNNNTGG 1 cut(s) 1555
BstYI RGATCY 1 cut(s) 1160
BstZ17I GTATAC 1 cut(s) 1359
Bsu36I CCTNAGG 1 cut(s) 665
BsuRI GGCC 5 cut(s) 170, 621, 681, 742, 971
BtgI CCRYGG 2 cut(s) 612, 622
BtrI CACGTC 2 cut(s) 1282, 1309
BtsCI GGATG 5 cut(s) 591, 622, 1080, 1351, 1460
BtsIMutI CAGTG 3 cut(s) 717, 1008, 1221
BveI ACCTGC 1 cut(s) 1586
Cac8I GCNNGC 4 cut(s) 679, 709, 985, 1230
CfoI GCGC 2 cut(s) 436, 880
Cfr10I RCCGGY 2 cut(s) 707, 1228
Cfr13I GGNCC 1 cut(s) 283
CseI GACGC 2 cut(s) 109, 683
Csp6I GTAC 6 cut(s) 191, 303, 661, 762, 863, 1030
CspCI CAANNNNNGTGG 2 cut(s) 480, 515
CviAII CATG 6 cut(s) 362, 390, 497, 623, 874, 1053
CviQI GTAC 6 cut(s) 191, 303, 661, 762, 863, 1030
DpnI GATC 5 cut(s) 74, 1162, 1470, 1513, 1603
DpnII GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
DraIII CACNNNGTG 1 cut(s) 1390
DrdI GACNNNNNNGTC 2 cut(s) 568, 1463
DriI GACNNNNNGTC 1 cut(s) 472
DseDI GACNNNNNNGTC 2 cut(s) 568, 1463
EaeI YGGCCR 5 cut(s) 168, 619, 679, 740, 969
Eam1104I CTCTTC 1 cut(s) 879
Eam1105I GACNNNNNGTC 1 cut(s) 472
EarI CTCTTC 1 cut(s) 879
EciI GGCGGA 1 cut(s) 551
Ecl136II GAGCTC 1 cut(s) 1059
Eco130I CCWWGG 3 cut(s) 622, 817, 1266
Eco24I GRGCYC 2 cut(s) 352, 1061
Eco31I GGTCTC 2 cut(s) 613, 947
Eco32I GATATC 1 cut(s) 460
Eco47I GGWCC 1 cut(s) 283
Eco53kI GAGCTC 1 cut(s) 1059
Eco57I CTGAAG 2 cut(s) 121, 348
Eco81I CCTNAGG 1 cut(s) 665
EcoICRI GAGCTC 1 cut(s) 1059
EcoRI GAATTC 3 cut(s) 920, 1016, 1107
EcoRII CCWGG 1 cut(s) 1554
EcoRV GATATC 1 cut(s) 460
EcoT14I CCWWGG 3 cut(s) 622, 817, 1266
EcoT38I GRGCYC 2 cut(s) 352, 1061
ErhI CCWWGG 3 cut(s) 622, 817, 1266
Esp3I CGTCTC 2 cut(s) 92, 1299
FaeI CATG 6 cut(s) 365, 393, 500, 626, 877, 1056
FaqI GGGAC 2 cut(s) 193, 407
FatI CATG 6 cut(s) 361, 389, 496, 622, 873, 1052
FblI GTMKAC 3 cut(s) 753, 1358, 1433
Fnu4HI GCNGC 4 cut(s) 682, 1048, 1445, 1593
FokI GGATG 5 cut(s) 598, 629, 1087, 1358, 1447
FriOI GRGCYC 2 cut(s) 352, 1061
Fsp4HI GCNGC 4 cut(s) 682, 1048, 1445, 1593
FspBI CTAG 4 cut(s) 188, 759, 900, 1419
FspI TGCGCA 1 cut(s) 435
GlaI GCGC 2 cut(s) 435, 879
GluI GCNGC 4 cut(s) 682, 1048, 1445, 1593
GsaI CCCAGC 1 cut(s) 1580
GsuI CTGGAG 1 cut(s) 1045
HaeII RGCGCY 1 cut(s) 881
HaeIII GGCC 5 cut(s) 170, 621, 681, 742, 971
HapII CCGG 6 cut(s) 260, 352, 708, 959, 1146, 1229
HgaI GACGC 2 cut(s) 109, 683
HhaI GCGC 2 cut(s) 436, 880
Hin1II CATG 6 cut(s) 365, 393, 500, 626, 877, 1056
Hin6I GCGC 2 cut(s) 434, 878
HinP1I GCGC 2 cut(s) 434, 878
HincII GTYRAC 3 cut(s) 121, 754, 1434
HindII GTYRAC 3 cut(s) 121, 754, 1434
HindIII AAGCTT 1 cut(s) 778
HpaII CCGG 6 cut(s) 260, 352, 708, 959, 1146, 1229
HphI GGTGA 5 cut(s) 175, 493, 524, 1084, 1510
Hpy166II GTNNAC 9 cut(s) 121, 250, 303, 573, 754, 865, 1032, 1359, 1434
Hpy188III TCNNGA 5 cut(s) 260, 418, 804, 1419, 1509
Hpy8I GTNNAC 9 cut(s) 121, 250, 303, 573, 754, 865, 1032, 1359, 1434
Hpy99I CGWCG 5 cut(s) 62, 556, 677, 1283, 1469
HpyAV CCTTC 3 cut(s) 222, 574, 1336
HpyCH4III ACNGT 7 cut(s) 766, 862, 1012, 1096, 1225, 1322, 1330
HpyCH4IV ACGT 4 cut(s) 551, 1281, 1308, 1389
HpyCH4V TGCA 5 cut(s) 250, 383, 634, 1528, 1592
HpyF10VI GCNNNNNNNGC 6 cut(s) 704, 713, 886, 1056, 1309, 1450
HpySE526I ACGT 4 cut(s) 551, 1281, 1308, 1389
Hsp92II CATG 6 cut(s) 365, 393, 500, 626, 877, 1056
HspAI GCGC 2 cut(s) 434, 878
Kpn2I TCCGGA 1 cut(s) 259
KpnI GGTACC 1 cut(s) 664
KroI GCCGGC 2 cut(s) 707, 1228
KroNI GCCGGC 2 cut(s) 709, 1230
Kzo9I GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 6 cut(s) 125, 363, 404, 806, 1056, 1064
Lsp1109I GCAGC 3 cut(s) 1059, 1456, 1604
LweI GCATC 3 cut(s) 191, 576, 1579
MaeI CTAG 4 cut(s) 188, 759, 900, 1419
MaeII ACGT 4 cut(s) 551, 1281, 1308, 1389
MaeIII GTNAC 6 cut(s) 163, 512, 961, 1090, 1393, 1537
MalI GATC 5 cut(s) 74, 1162, 1470, 1513, 1603
MboI GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
MboII GAAGA 4 cut(s) 127, 341, 896, 1598
MflI RGATCY 1 cut(s) 1160
MhlI GDGCHC 3 cut(s) 252, 352, 1061
MlsI TGGCCA 3 cut(s) 621, 742, 971
MluCI AATT 7 cut(s) 426, 523, 920, 1016, 1107, 1182, 1369
MluI ACGCGT 1 cut(s) 101
MluNI TGGCCA 3 cut(s) 621, 742, 971
MlyI GAGTC 6 cut(s) 56, 126, 482, 602, 695, 1261
MmeI TCCRAC 1 cut(s) 1302
Mox20I TGGCCA 3 cut(s) 621, 742, 971
MroI TCCGGA 1 cut(s) 259
MroNI GCCGGC 2 cut(s) 707, 1228
MroXI GAANNNNTTC 2 cut(s) 134, 1369
MscI TGGCCA 3 cut(s) 621, 742, 971
MseI TTAA 2 cut(s) 425, 1103
MslI CAYNNNNRTG 1 cut(s) 1523
Msp20I TGGCCA 3 cut(s) 621, 742, 971
MspCI CTTAAG 1 cut(s) 1102
MspI CCGG 6 cut(s) 260, 352, 708, 959, 1146, 1229
MspR9I CCNGG 4 cut(s) 352, 959, 1147, 1556
MvaI CCWGG 1 cut(s) 1556
MvnI CGCG 2 cut(s) 103, 1028
MwoI GCNNNNNNNGC 6 cut(s) 704, 713, 886, 1056, 1309, 1450
NaeI GCCGGC 2 cut(s) 709, 1230
NciI CCSGG 3 cut(s) 352, 959, 1147
NcoI CCATGG 1 cut(s) 622
NdeII GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
NgoMIV GCCGGC 2 cut(s) 707, 1228
NlaIII CATG 6 cut(s) 365, 393, 500, 626, 877, 1056
NlaIV GGNNCC 2 cut(s) 662, 1162
NmuCI GTSAC 5 cut(s) 163, 512, 961, 1090, 1537
NsbI TGCGCA 1 cut(s) 435
NspI RCATGY 1 cut(s) 500
OliI CACNNNNGTG 1 cut(s) 1523
PciSI GCTCTTC 1 cut(s) 879
PcsI WCGNNNNNNNCGW 4 cut(s) 551, 557, 1164, 1326
PdiI GCCGGC 2 cut(s) 709, 1230
PdmI GAANNNNTTC 2 cut(s) 134, 1369
PfeI GAWTC 5 cut(s) 54, 86, 92, 439, 1415
PflFI GACNNNGTC 1 cut(s) 550
PflMI CCANNNNNTGG 1 cut(s) 1390
PkrI GCNGC 4 cut(s) 683, 1049, 1446, 1594
PleI GAGTC 6 cut(s) 56, 125, 481, 601, 695, 1260
PpsI GAGTC 6 cut(s) 56, 125, 481, 601, 695, 1260
Ppu21I YACGTR 1 cut(s) 1390
PshAI GACNNNNGTC 1 cut(s) 959
PsiI TTATAA 1 cut(s) 1317
Psp124BI GAGCTC 1 cut(s) 1061
Psp6I CCWGG 1 cut(s) 1554
PspFI CCCAGC 1 cut(s) 1576
PspGI CCWGG 1 cut(s) 1554
PspN4I GGNNCC 2 cut(s) 662, 1162
PspPI GGNCC 1 cut(s) 283
PsuI RGATCY 1 cut(s) 1160
PsyI GACNNNGTC 1 cut(s) 550
RsaI GTAC 6 cut(s) 192, 304, 662, 763, 864, 1031
RsaNI GTAC 6 cut(s) 191, 303, 661, 762, 863, 1030
RseI CAYNNNNRTG 1 cut(s) 1523
SacI GAGCTC 1 cut(s) 1061
SalI GTCGAC 2 cut(s) 752, 1432
SapI GCTCTTC 1 cut(s) 879
SaqAI TTAA 2 cut(s) 425, 1103
SatI GCNGC 4 cut(s) 682, 1048, 1445, 1593
Sau3AI GATC 5 cut(s) 72, 1160, 1468, 1511, 1601
Sau96I GGNCC 1 cut(s) 283
SchI GAGTC 6 cut(s) 56, 126, 482, 602, 695, 1261
ScrFI CCNGG 4 cut(s) 352, 959, 1147, 1556
SduI GDGCHC 3 cut(s) 252, 352, 1061
SfaNI GCATC 3 cut(s) 191, 576, 1579
SfcI CTRYAG 1 cut(s) 76
SinI GGWCC 1 cut(s) 283
SmiMI CAYNNNNRTG 1 cut(s) 1523
SmlI CTYRAG 4 cut(s) 318, 418, 781, 1102
SmoI CTYRAG 4 cut(s) 318, 418, 781, 1102
SpeI ACTAGT 2 cut(s) 187, 758
Sse9I AATT 7 cut(s) 426, 523, 920, 1016, 1107, 1182, 1369
SsiI CCGC 6 cut(s) 536, 682, 831, 975, 1125, 1218
SspMI CTAG 4 cut(s) 188, 759, 900, 1419
SstI GAGCTC 1 cut(s) 1061
StyD4I CCNGG 4 cut(s) 350, 957, 1145, 1554
StyI CCWWGG 3 cut(s) 622, 817, 1266
TaaI ACNGT 7 cut(s) 766, 862, 1012, 1096, 1225, 1322, 1330
TaiI ACGT 4 cut(s) 554, 1284, 1311, 1392
TasI AATT 7 cut(s) 426, 523, 920, 1016, 1107, 1182, 1369
TatI WGTACW 3 cut(s) 190, 302, 862
TauI GCSGC 1 cut(s) 684
TfiI GAWTC 5 cut(s) 54, 86, 92, 439, 1415
Tru1I TTAA 2 cut(s) 425, 1103
Tru9I TTAA 2 cut(s) 425, 1103
TscAI CASTG 3 cut(s) 724, 1015, 1228
TseFI GTSAC 5 cut(s) 163, 512, 961, 1090, 1537
TseI GCWGC 3 cut(s) 1047, 1444, 1592
Tsp45I GTSAC 5 cut(s) 163, 512, 961, 1090, 1537
TspDTI ATGAA 2 cut(s) 285, 1362
TspGWI ACGGA 6 cut(s) 138, 629, 1049, 1173, 1453, 1461
TspRI CASTG 3 cut(s) 724, 1015, 1228
Tth111I GACNNNGTC 1 cut(s) 550
Van91I CCANNNNNTGG 1 cut(s) 1390
Vha464I CTTAAG 1 cut(s) 1102
VneI GTGCAC 1 cut(s) 248
VpaK11BI GGWCC 1 cut(s) 283
XapI RAATTY 4 cut(s) 920, 1016, 1107, 1369
XbaI TCTAGA 1 cut(s) 1418
XceI RCATGY 1 cut(s) 500
XmiI GTMKAC 3 cut(s) 753, 1358, 1433
XmnI GAANNNNTTC 2 cut(s) 134, 1369
XspI CTAG 4 cut(s) 188, 759, 900, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.