Prupe.2G097500_v2.0.a1

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000217
Physical Location & Seq
Reverse (-)
15245503 .. 15247062
1560 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G097500.1

Sequence Viewer

Length: 1560 bp
ATGACATTGCCAAGGTTTGTGGTGGTAAAATCAAACCACAACAAAAAGTACTTGCGCTACCTAAAAACAGAAGATGGAGAGGAGGACGCCCCGGCGGAGTTTCTCAAATTCACCGGAGAAGAGGCCGGGAGCCATTACGCAAAGTACGAAGTGGAGATGGCAAAGAGTACCGAGAACAAGGGATTTGTCCACATTAGATGCTGTTACAACAATAAATACTGGGTAAGCGTCAATGGCATGGATAAGTTCGAAGGCGATGTTTTGATTGTTGCAGGGGCAGACGAACCGGAGGAAGACCAATCCAAACCCTCATGTACCTTGTTCGAGCCGGTCTACGTAGATCCAATAGACGAAGAAGACGACGACAATAAACCGGACGATAAAGCTGAAGATGACCTTGAGGAGGACAATCAGGTAGTCCAATTTCGCCACGTCCAGCTCGGACGCTACACTTGCTTGCACAACGATTCGGATGCGCTAGTACTTTTCGGAGGCTCAAACTCTACCACAGACGATCCGAACAACCTAGAGTCCCGGGATGTGTGCACTGTCGTCAATTGGGAATCGCTGGTGATTTTGCCGAAACACGTGGTGTTCAAGGGCGATGATGACAACTACATCACCGCCCAAATGAGCGACTACCACGGGGACGACGACGATGGCGATGGACCAAACCTCATGTTCCACGGTAATGATATTAATGATCCGGGTGTGGCGAACGAGATCTTCATGAACGCGGACGGAACCCTACAAATAAAGAATATTTTTTTCGAAAGATATTGGAGACTCGCCAAGGAAGAGTGGATCTGGGCGGACGCATTTAACCCGACCCCCAGAGACAAAAACTATAAAGACACGTTGTATAAGGCGATCAAGCTTTACGACAAAACCATAGCTCTCATTAACGTTGGGAACAACAATTACTGCAAGAGATATGCGAGCGGGATATGTGCTCTCAGTGCCAACGTCCCTAATCTCTCCATATACTCTCATCTCAAGGTGGAAGAGCCTGTTAAGTCGAGGACCATATACAAAGTCAAGTATCGCCTTGACCACGCCAGGACCTACAATTACCAAACTGACTTCGAAATCGCCACCGCAGAGGCCGTCAACTTCACCCAAGAAACCACCACTGTAACCCTAAAGCTGTTGTACAGGAGGCTGAGTAGTTGCAGTTGGAATGATATCAACAGAATTTACTCGATGAAGCTCAAAACCACCATTGAAGCTCCAGGCGTTCCGAGAATCACGACACACGAAGGCGGATTGAATAAGGTTAAAATTTCGGATGGGTTTAAAGGAGATGTCCAGTGGGGAGAGACCGAGGCCTACCAAACTGAAGTGGAGACTCTGTGCGTGGTTGATGTGCCGGCAAAGAGTGTGCTGAAGGTGAGGCTGCTGGCCACGACCGCTTCATGTGACGTCCCGTTCTCCTACTCTCGTCAGGACACTCGTAGCAACGGCCAGGTGCATGTCACAAACGACTTGGACGATGGTTTTTACAGTGGTATCAATGCCTTCAACTTCAAGTACAATACCAAGGAAGAAAAGCTGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

520

Amino Acids

59.06

Weight (kDa)

4.87

Isoelectric Point (pI)

33.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1425
AccBSI CCGCTC 1 cut(s) 942
AccI GTMKAC 1 cut(s) 333
AccII CGCG 1 cut(s) 737
AciI CCGC 8 cut(s) 95, 624, 737, 812, 942, 1098, 1263, 1410
AclI AACGTT 1 cut(s) 906
AclWI GGATC 4 cut(s) 335, 509, 698, 812
AcoI YGGCCR 2 cut(s) 1401, 1462
AcsI RAATTY 3 cut(s) 107, 1194, 1281
AcuI CTGAAG 3 cut(s) 408, 1359, 1406
AcvI CACGTG 1 cut(s) 589
AcyI GRCGYC 2 cut(s) 87, 1422
AdeI CACNNNGTG 1 cut(s) 592
AfaI GTAC 7 cut(s) 50, 146, 169, 316, 483, 1154, 1532
AfiI CCNNNNNNNGG 1 cut(s) 403
AflIII ACRYGT 2 cut(s) 586, 855
AgsI TTSAA 5 cut(s) 598, 1226, 1270, 1522, 1528
AjiI CACGTC 1 cut(s) 433
AjnI CCWGG 3 cut(s) 1058, 1231, 1464
AluBI AGCT 8 cut(s) 386, 439, 877, 896, 1147, 1210, 1229, 1552
AluI AGCT 8 cut(s) 386, 439, 877, 896, 1147, 1210, 1229, 1552
Alw21I GWGCWC 2 cut(s) 548, 955
Alw26I GTCTC 4 cut(s) 778, 831, 1313, 1340
Alw44I GTGCAC 1 cut(s) 544
AlwI GGATC 4 cut(s) 335, 509, 698, 812
Ama87I CYCGRG 1 cut(s) 534
AoxI GGCC 5 cut(s) 123, 1104, 1326, 1401, 1462
ApaLI GTGCAC 1 cut(s) 544
ApeKI GCWGC 1 cut(s) 1396
ApoI RAATTY 3 cut(s) 107, 1194, 1281
AseI ATTAAT 1 cut(s) 699
AspLEI GCGC 2 cut(s) 57, 478
AspS9I GGNCC 3 cut(s) 668, 1023, 1062
AsuC2I CCSGG 5 cut(s) 92, 127, 535, 536, 708
AsuHPI GGTGA 5 cut(s) 103, 583, 613, 1108, 1402
AsuII TTCGAA 3 cut(s) 249, 771, 1086
AvaI CYCGRG 1 cut(s) 534
AvaII GGWCC 3 cut(s) 668, 1023, 1062
BaeGI GKGCMC 1 cut(s) 548
BaeI ACNNNNGTAYC 2 cut(s) 1492, 1525
BalI TGGCCA 1 cut(s) 1403
BbrPI CACGTG 1 cut(s) 589
BbsI GAAGAC 2 cut(s) 300, 363
Bbv12I GWGCWC 2 cut(s) 548, 955
BbvI GCAGC 1 cut(s) 1383
BccI CCATC 6 cut(s) 68, 151, 653, 659, 1283, 1487
BceAI ACGGC 2 cut(s) 1091, 1477
BcgI CGANNNNNNTGC 2 cut(s) 455, 489
BciT130I CCWGG 3 cut(s) 1060, 1233, 1466
BcnI CCSGG 5 cut(s) 92, 127, 535, 536, 708
BcoDI GTCTC 4 cut(s) 778, 831, 1313, 1340
BfaI CTAG 2 cut(s) 479, 527
BglII AGATCT 1 cut(s) 723
BisI GCNGC 1 cut(s) 1397
BlsI GCNGC 1 cut(s) 1398
BmcAI AGTACT 2 cut(s) 50, 483
Bme1390I CCNGG 8 cut(s) 92, 127, 535, 536, 708, 1060, 1233, 1466
Bme18I GGWCC 3 cut(s) 668, 1023, 1062
BmeT110I CYCGRG 1 cut(s) 534
BmgBI CACGTC 1 cut(s) 433
BmgT120I GGNCC 3 cut(s) 668, 1023, 1062
BmiI GGNNCC 2 cut(s) 131, 745
BmrFI CCNGG 8 cut(s) 92, 127, 535, 536, 708, 1060, 1233, 1466
BmrI ACTGGG 1 cut(s) 229
BmsI GCATC 2 cut(s) 188, 463
BmuI ACTGGG 1 cut(s) 229
BpiI GAAGAC 2 cut(s) 300, 363
BpmI CTGGAG 1 cut(s) 1215
Bpu14I TTCGAA 3 cut(s) 249, 771, 1086
BpuEI CTTGAG 2 cut(s) 419, 980
BpuMI CCSGG 5 cut(s) 92, 127, 535, 536, 708
BsaAI YACGTR 2 cut(s) 337, 589
BsaHI GRCGYC 2 cut(s) 87, 1422
BsaI GGTCTC 1 cut(s) 1313
BsaJI CCNNGG 8 cut(s) 11, 90, 534, 643, 685, 792, 1323, 1539
BsaWI WCCGGW 3 cut(s) 113, 286, 373
BsaXI ACNNNNNCTCC 4 cut(s) 1150, 1180, 1337, 1367
Bsc4I CCNNNNNNNGG 1 cut(s) 403
Bse118I RCCGGY 2 cut(s) 328, 1369
Bse1I ACTGG 2 cut(s) 224, 1309
Bse3DI GCAATG 1 cut(s) 5
BseBI CCWGG 3 cut(s) 1060, 1233, 1466
BseDI CCNNGG 8 cut(s) 11, 90, 534, 643, 685, 792, 1323, 1539
BseGI GGATG 3 cut(s) 478, 544, 1294
BseLI CCNNNNNNNGG 1 cut(s) 403
BseMI GCAATG 1 cut(s) 5
BseMII CTCAG 2 cut(s) 970, 1154
BseNI ACTGG 2 cut(s) 224, 1309
BseRI GAGGAG 2 cut(s) 95, 416
BseSI GKGCMC 1 cut(s) 548
BseXI GCAGC 1 cut(s) 1383
BseYI CCCAGC 1 cut(s) 1552
Bsh1236I CGCG 1 cut(s) 737
Bsh1285I CGRYCG 1 cut(s) 1410
BshFI GGCC 5 cut(s) 125, 1106, 1328, 1403, 1464
BsiEI CGRYCG 1 cut(s) 1410
BsiHKAI GWGCWC 2 cut(s) 548, 955
BsiHKCI CYCGRG 1 cut(s) 534
BsiSI CCGG 9 cut(s) 92, 114, 126, 287, 329, 374, 535, 707, 1370
BslFI GGGAC 4 cut(s) 517, 662, 953, 1409
BslI CCNNNNNNNGG 1 cut(s) 403
BsmAI GTCTC 4 cut(s) 778, 831, 1313, 1340
BsmFI GGGAC 4 cut(s) 517, 662, 953, 1409
BsnI GGCC 5 cut(s) 125, 1106, 1328, 1403, 1464
Bso31I GGTCTC 1 cut(s) 1313
BsoBI CYCGRG 1 cut(s) 534
Bsp119I TTCGAA 3 cut(s) 249, 771, 1086
Bsp1286I GDGCHC 2 cut(s) 548, 955
Bsp1407I TGTACA 1 cut(s) 1152
Bsp143I GATC 6 cut(s) 340, 514, 703, 723, 804, 870
BspACI CCGC 8 cut(s) 95, 624, 737, 812, 942, 1098, 1263, 1410
BspANI GGCC 5 cut(s) 125, 1106, 1328, 1403, 1464
BspCNI CTCAG 2 cut(s) 969, 1155
BspFNI CGCG 1 cut(s) 737
BspHI TCATGA 1 cut(s) 729
BspLI GGNNCC 2 cut(s) 131, 745
BspPI GGATC 4 cut(s) 335, 509, 698, 812
BspQI GCTCTTC 1 cut(s) 999
BspT104I TTCGAA 3 cut(s) 249, 771, 1086
BspTNI GGTCTC 1 cut(s) 1313
BsrBI CCGCTC 1 cut(s) 942
BsrDI GCAATG 1 cut(s) 5
BsrFI RCCGGY 2 cut(s) 328, 1369
BsrGI TGTACA 1 cut(s) 1152
BsrI ACTGG 2 cut(s) 224, 1309
BssAI RCCGGY 2 cut(s) 328, 1369
BssECI CCNNGG 8 cut(s) 11, 90, 534, 643, 685, 792, 1323, 1539
BssMI GATC 6 cut(s) 340, 514, 703, 723, 804, 870
BssNI GRCGYC 2 cut(s) 87, 1422
BssT1I CCWWGG 3 cut(s) 11, 792, 1539
Bst2UI CCWGG 3 cut(s) 1060, 1233, 1466
Bst4CI ACNGT 4 cut(s) 550, 689, 1135, 1505
Bst6I CTCTTC 3 cut(s) 114, 792, 999
BstACI GRCGYC 2 cut(s) 87, 1422
BstAUI TGTACA 1 cut(s) 1152
BstBAI YACGTR 2 cut(s) 337, 589
BstBI TTCGAA 3 cut(s) 249, 771, 1086
BstC8I GCNNGC 4 cut(s) 458, 940, 1371, 1401
BstDEI CTNAG 2 cut(s) 956, 1163
BstDSI CCRYGG 2 cut(s) 643, 685
BstENI CCTNNNNNAGG 1 cut(s) 401
BstF5I GGATG 3 cut(s) 478, 544, 1294
BstFNI CGCG 1 cut(s) 737
BstHHI GCGC 2 cut(s) 57, 478
BstKTI GATC 6 cut(s) 343, 517, 706, 726, 807, 873
BstMAI GTCTC 4 cut(s) 778, 831, 1313, 1340
BstMBI GATC 6 cut(s) 340, 514, 703, 723, 804, 870
BstMCI CGRYCG 1 cut(s) 1410
BstMWI GCNNNNNNNGC 4 cut(s) 234, 453, 959, 1409
BstNI CCWGG 3 cut(s) 1060, 1233, 1466
BstNSI RCATGY 1 cut(s) 1475
BstSCI CCNGG 8 cut(s) 90, 125, 533, 534, 706, 1058, 1231, 1464
BstSLI GKGCMC 1 cut(s) 548
BstSNI TACGTA 1 cut(s) 337
BstUI CGCG 1 cut(s) 737
BstV1I GCAGC 1 cut(s) 1383
BstV2I GAAGAC 2 cut(s) 300, 363
BstX2I RGATCY 3 cut(s) 340, 723, 804
BstYI RGATCY 3 cut(s) 340, 723, 804
BsuRI GGCC 5 cut(s) 125, 1106, 1328, 1403, 1464
BtgI CCRYGG 2 cut(s) 643, 685
BtgZI GCGATG 3 cut(s) 270, 618, 678
BtrI CACGTC 1 cut(s) 433
BtsCI GGATG 3 cut(s) 478, 544, 1294
BtsIMutI CAGTG 5 cut(s) 546, 964, 1131, 1316, 1510
Cac8I GCNNGC 4 cut(s) 458, 940, 1371, 1401
CciI TCATGA 1 cut(s) 729
CfoI GCGC 2 cut(s) 57, 478
Cfr10I RCCGGY 2 cut(s) 328, 1369
Cfr13I GGNCC 3 cut(s) 668, 1023, 1062
Cfr9I CCCGGG 1 cut(s) 534
CseI GACGC 4 cut(s) 95, 217, 453, 824
Csp6I GTAC 7 cut(s) 49, 145, 168, 315, 482, 1153, 1531
CspCI CAANNNNNGTGG 1 cut(s) 35
CviAII CATG 6 cut(s) 238, 312, 679, 730, 1416, 1472
CviQI GTAC 7 cut(s) 49, 145, 168, 315, 482, 1153, 1531
DdeI CTNAG 2 cut(s) 956, 1163
DpnI GATC 6 cut(s) 342, 516, 705, 725, 806, 872
DpnII GATC 6 cut(s) 340, 514, 703, 723, 804, 870
DraI TTTAAA 1 cut(s) 1297
DraIII CACNNNGTG 1 cut(s) 592
EaeI YGGCCR 2 cut(s) 1401, 1462
Eam1104I CTCTTC 3 cut(s) 114, 792, 999
EarI CTCTTC 3 cut(s) 114, 792, 999
EciI GGCGGA 3 cut(s) 110, 827, 1278
Eco105I TACGTA 1 cut(s) 337
Eco130I CCWWGG 3 cut(s) 11, 792, 1539
Eco147I AGGCCT 1 cut(s) 1328
Eco31I GGTCTC 1 cut(s) 1313
Eco32I GATATC 1 cut(s) 1186
Eco47I GGWCC 3 cut(s) 668, 1023, 1062
Eco57I CTGAAG 3 cut(s) 408, 1359, 1406
Eco72I CACGTG 1 cut(s) 589
Eco88I CYCGRG 1 cut(s) 534
EcoNI CCTNNNNNAGG 1 cut(s) 401
EcoO109I RGGNCCY 1 cut(s) 1062
EcoRII CCWGG 3 cut(s) 1058, 1231, 1464
EcoRV GATATC 1 cut(s) 1186
EcoT14I CCWWGG 3 cut(s) 11, 792, 1539
ErhI CCWWGG 3 cut(s) 11, 792, 1539
FaeI CATG 6 cut(s) 241, 315, 682, 733, 1419, 1475
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FaqI GGGAC 4 cut(s) 517, 662, 953, 1409
FatI CATG 6 cut(s) 237, 311, 678, 729, 1415, 1471
FauI CCCGC 1 cut(s) 935
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 1 cut(s) 1397
FokI GGATG 3 cut(s) 485, 551, 1301
Fsp4HI GCNGC 1 cut(s) 1397
FspBI CTAG 2 cut(s) 479, 527
GlaI GCGC 2 cut(s) 56, 477
GluI GCNGC 1 cut(s) 1397
GsaI CCCAGC 1 cut(s) 1556
GsuI CTGGAG 1 cut(s) 1215
HaeIII GGCC 5 cut(s) 125, 1106, 1328, 1403, 1464
HapII CCGG 9 cut(s) 92, 114, 126, 287, 329, 374, 535, 707, 1370
HgaI GACGC 4 cut(s) 95, 217, 453, 824
HhaI GCGC 2 cut(s) 57, 478
Hin1I GRCGYC 2 cut(s) 87, 1422
Hin1II CATG 6 cut(s) 241, 315, 682, 733, 1419, 1475
Hin6I GCGC 2 cut(s) 55, 476
HinP1I GCGC 2 cut(s) 55, 476
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HindIII AAGCTT 1 cut(s) 875
HinfI GANTC 6 cut(s) 467, 530, 563, 786, 1245, 1348
HpaII CCGG 9 cut(s) 92, 114, 126, 287, 329, 374, 535, 707, 1370
HphI GGTGA 5 cut(s) 103, 583, 613, 1108, 1402
Hpy166II GTNNAC 4 cut(s) 190, 334, 546, 1111
Hpy188I TCNGA 6 cut(s) 443, 472, 491, 519, 1242, 1288
Hpy188III TCNNGA 3 cut(s) 730, 1249, 1445
Hpy8I GTNNAC 4 cut(s) 190, 334, 546, 1111
Hpy99I CGWCG 3 cut(s) 365, 656, 659
HpyAV CCTTC 4 cut(s) 245, 1253, 1381, 1528
HpyCH4III ACNGT 4 cut(s) 550, 689, 1135, 1505
HpyCH4IV ACGT 7 cut(s) 336, 432, 588, 857, 906, 966, 1422
HpyCH4V TGCA 6 cut(s) 272, 460, 546, 927, 1173, 1471
HpyF10VI GCNNNNNNNGC 4 cut(s) 234, 453, 959, 1409
HpyF3I CTNAG 2 cut(s) 956, 1163
HpySE526I ACGT 7 cut(s) 336, 432, 588, 857, 906, 966, 1422
Hsp92I GRCGYC 2 cut(s) 87, 1422
Hsp92II CATG 6 cut(s) 241, 315, 682, 733, 1419, 1475
HspAI GCGC 2 cut(s) 55, 476
KroI GCCGGC 1 cut(s) 1369
KroNI GCCGGC 1 cut(s) 1371
Kzo9I GATC 6 cut(s) 340, 514, 703, 723, 804, 870
LguI GCTCTTC 1 cut(s) 999
LmnI GCTCC 2 cut(s) 129, 1234
Lsp1109I GCAGC 1 cut(s) 1383
LweI GCATC 2 cut(s) 188, 463
MaeI CTAG 2 cut(s) 479, 527
MaeII ACGT 7 cut(s) 336, 432, 588, 857, 906, 966, 1422
MaeIII GTNAC 4 cut(s) 203, 1135, 1418, 1474
MalI GATC 6 cut(s) 342, 516, 705, 725, 806, 872
MbiI CCGCTC 1 cut(s) 942
MboI GATC 6 cut(s) 340, 514, 703, 723, 804, 870
MfeI CAATTG 1 cut(s) 556
MflI RGATCY 3 cut(s) 340, 723, 804
MhlI GDGCHC 2 cut(s) 548, 955
MlsI TGGCCA 1 cut(s) 1403
MluCI AATT 7 cut(s) 107, 422, 556, 919, 1069, 1194, 1281
MluNI TGGCCA 1 cut(s) 1403
MlyI GAGTC 3 cut(s) 539, 780, 1342
MmeI TCCRAC 1 cut(s) 1157
Mox20I TGGCCA 1 cut(s) 1403
MroNI GCCGGC 1 cut(s) 1369
MscI TGGCCA 1 cut(s) 1403
MseI TTAA 6 cut(s) 699, 822, 903, 1014, 1278, 1296
MslI CAYNNNNRTG 1 cut(s) 690
Msp20I TGGCCA 1 cut(s) 1403
MspI CCGG 9 cut(s) 92, 114, 126, 287, 329, 374, 535, 707, 1370
MspR9I CCNGG 8 cut(s) 92, 127, 535, 536, 708, 1060, 1233, 1466
MunI CAATTG 1 cut(s) 556
MvaI CCWGG 3 cut(s) 1060, 1233, 1466
MvnI CGCG 1 cut(s) 737
MwoI GCNNNNNNNGC 4 cut(s) 234, 453, 959, 1409
NaeI GCCGGC 1 cut(s) 1371
NciI CCSGG 5 cut(s) 92, 127, 535, 536, 708
NdeII GATC 6 cut(s) 340, 514, 703, 723, 804, 870
NgoMIV GCCGGC 1 cut(s) 1369
NlaIII CATG 6 cut(s) 241, 315, 682, 733, 1419, 1475
NlaIV GGNNCC 2 cut(s) 131, 745
NmuCI GTSAC 2 cut(s) 1418, 1474
NspI RCATGY 1 cut(s) 1475
NspV TTCGAA 3 cut(s) 249, 771, 1086
PagI TCATGA 1 cut(s) 729
PceI AGGCCT 1 cut(s) 1328
PciSI GCTCTTC 1 cut(s) 999
PcsI WCGNNNNNNNCGW 5 cut(s) 144, 357, 651, 660, 1488
PdiI GCCGGC 1 cut(s) 1371
PfeI GAWTC 3 cut(s) 467, 563, 1245
PkrI GCNGC 1 cut(s) 1398
PleI GAGTC 3 cut(s) 538, 780, 1342
PmaCI CACGTG 1 cut(s) 589
PmlI CACGTG 1 cut(s) 589
PpsI GAGTC 3 cut(s) 538, 780, 1342
Ppu21I YACGTR 2 cut(s) 337, 589
PpuMI RGGWCCY 1 cut(s) 1062
PshBI ATTAAT 1 cut(s) 699
Psp1406I AACGTT 1 cut(s) 906
Psp5II RGGWCCY 1 cut(s) 1062
Psp6I CCWGG 3 cut(s) 1058, 1231, 1464
PspCI CACGTG 1 cut(s) 589
PspFI CCCAGC 1 cut(s) 1552
PspGI CCWGG 3 cut(s) 1058, 1231, 1464
PspN4I GGNNCC 2 cut(s) 131, 745
PspPI GGNCC 3 cut(s) 668, 1023, 1062
PspPPI RGGWCCY 1 cut(s) 1062
PsrI GAACNNNNNNTAC 2 cut(s) 905, 937
PsuI RGATCY 3 cut(s) 340, 723, 804
RsaI GTAC 7 cut(s) 50, 146, 169, 316, 483, 1154, 1532
RsaNI GTAC 7 cut(s) 49, 145, 168, 315, 482, 1153, 1531
RseI CAYNNNNRTG 1 cut(s) 690
SapI GCTCTTC 1 cut(s) 999
SaqAI TTAA 6 cut(s) 699, 822, 903, 1014, 1278, 1296
SatI GCNGC 1 cut(s) 1397
Sau3AI GATC 6 cut(s) 340, 514, 703, 723, 804, 870
Sau96I GGNCC 3 cut(s) 668, 1023, 1062
ScaI AGTACT 2 cut(s) 50, 483
SchI GAGTC 3 cut(s) 539, 780, 1342
ScrFI CCNGG 8 cut(s) 92, 127, 535, 536, 708, 1060, 1233, 1466
SduI GDGCHC 2 cut(s) 548, 955
SfaNI GCATC 2 cut(s) 188, 463
SfuI TTCGAA 3 cut(s) 249, 771, 1086
SinI GGWCC 3 cut(s) 668, 1023, 1062
SmaI CCCGGG 1 cut(s) 536
SmiMI CAYNNNNRTG 1 cut(s) 690
SmlI CTYRAG 2 cut(s) 398, 995
SmoI CTYRAG 2 cut(s) 398, 995
SnaBI TACGTA 1 cut(s) 337
Sse9I AATT 7 cut(s) 107, 422, 556, 919, 1069, 1194, 1281
SseBI AGGCCT 1 cut(s) 1328
SsiI CCGC 8 cut(s) 95, 624, 737, 812, 942, 1098, 1263, 1410
SspI AATATT 1 cut(s) 763
SspMI CTAG 2 cut(s) 479, 527
StuI AGGCCT 1 cut(s) 1328
StyD4I CCNGG 8 cut(s) 90, 125, 533, 534, 706, 1058, 1231, 1464
StyI CCWWGG 3 cut(s) 11, 792, 1539
TaaI ACNGT 4 cut(s) 550, 689, 1135, 1505
TaiI ACGT 7 cut(s) 339, 435, 591, 860, 909, 969, 1425
TaqI TCGA 6 cut(s) 249, 324, 771, 1019, 1086, 1202
TaqII GACCGA 1 cut(s) 1337
TasI AATT 7 cut(s) 107, 422, 556, 919, 1069, 1194, 1281
TatI WGTACW 4 cut(s) 48, 481, 1152, 1530
TfiI GAWTC 3 cut(s) 467, 563, 1245
Tru1I TTAA 6 cut(s) 699, 822, 903, 1014, 1278, 1296
Tru9I TTAA 6 cut(s) 699, 822, 903, 1014, 1278, 1296
TscAI CASTG 5 cut(s) 553, 964, 1138, 1316, 1510
TseFI GTSAC 2 cut(s) 1418, 1474
TseI GCWGC 1 cut(s) 1396
Tsp45I GTSAC 2 cut(s) 1418, 1474
TspDTI ATGAA 4 cut(s) 718, 746, 1220, 1404
TspGWI ACGGA 1 cut(s) 756
TspMI CCCGGG 1 cut(s) 534
TspRI CASTG 5 cut(s) 553, 964, 1138, 1316, 1510
VneI GTGCAC 1 cut(s) 544
VpaK11BI GGWCC 3 cut(s) 668, 1023, 1062
VspI ATTAAT 1 cut(s) 699
XagI CCTNNNNNAGG 1 cut(s) 401
XapI RAATTY 3 cut(s) 107, 1194, 1281
XceI RCATGY 1 cut(s) 1475
XmaI CCCGGG 1 cut(s) 534
XmiI GTMKAC 1 cut(s) 333
XspI CTAG 2 cut(s) 479, 527
ZraI GACGTC 1 cut(s) 1423
ZrmI AGTACT 2 cut(s) 50, 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.