RLG00000021413

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000217
Physical Location & Seq
Forward (+)
75170299 .. 75171603
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021413

Sequence Viewer

Length: 1305 bp
ATGTCGTTCCTATTACCACCCACTATTGCGCTCAGTTCAGCCTGGTTCTTCAGTTTCAGCGACTCCTACCTGATCTACAGGAATGATTCTAATTCCGAGATGCGTGGCTTTCTCAGAGTCAACGGATCGAATGTCTTCAGCCCATTAGCAAAGTTCGAAGTGGTGACGGCCAACACTGGGACGGGACTAGTACATATCCGATGCTCTCAGAACAGAAAGTTCCTGCGAAGGAAATTTGAGAGTGATGTGCACCTTACTCCGGAGGCTGATGAACCAGAGGAGGACCAATCCAAATGGTCGTGTACATTATTTGAGCCTCAAGTAGCTGAAGATGGCAACCCCGACAAAGCCCGGTTGTTCCATGTCCAATCAAAACAATATGCAACGGCATGGGACATAGGTGGAGCAGTAAGGGTCTTGAGATTAATTGTTGCGCAGAATCAACAGAATATCTTTGATATCATCGACTTGGAGTCATTGGTGATATTGCCAAAGCATGAGGCCTTCAAAGGCCACACCGGCAATTACCTTCAGCTTGTGGCGGATGCTAAGCTCAGGTTCATATCCACCGATAAGGGGATTCCTGAGTCCTGGTTCGAGGTGTCCACTGATGGCCATGGAAGGGTACAAATCAAATCTTACCACGACAATAGCTACTTTTTTAACAGCAGTGACAGGATTTGGTCTGACCCAAGGGTTGCCGCCACCGATACTAGCACCTTGTTTTGGCCGGTGAAGGTCGACAGTAATAAGGTCGCTCTCAAAAGCAACAACAAGTTTTGCGCCCAAATCAGTGATGCTAATGGAACCGACGCCCTCAATGCAGTCTACATCAGCATTCCAACCAACTCACGCTTCACGCTGGAAGAGCTTGTTCTCTCTAGGAGAATTTACAACACCGACTTCGACCTTAAGAATGCCATAATCTACGGCGAGACCCCGGTCACTATGGCCACCGCAAATGCCAGCAACAACACCTCAGCAGACAACACTGTGGAATTCAAGTTCGCTTACACGGAGAGTAAGAGCAGCACGTGGAGCGCCAGCCACTCGTGGATAGTGGGAGTGAGTGCCACCGCCAGCTTCAAAGTTCCAATCATCGGCGGTACTGAGGTCACTGCTTCCGCAGAATATTCCGGATCATACGAGTGGGGAGAGACAATTACATCCGAAAACACGTTGGAGACCACCTACACGGTTACAGTGCCGGCAAACACTTCGATATCTGTGAGCCTGATGGCGACTAAGGGAACTTGCGATGTGCCTTACTCTTATTATCAGCGGGACGTGCTTTATAACGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

435

Amino Acids

48.35

Weight (kDa)

5.29

Isoelectric Point (pI)

29.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 21 - 155 3e-18 Agglutinin domain
Aerolysin PF01117 303 - 425 1.3e-09 Aerolysin toxin
ETX_MTX2 PF03318 312 - 424 3.9e-08 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1296
Acc16I TGCGCA 1 cut(s) 435
AccI GTMKAC 2 cut(s) 741, 828
AccIII TCCGGA 2 cut(s) 259, 1136
AciI CCGC 7 cut(s) 542, 702, 957, 1077, 1104, 1125, 1282
AclWI GGATC 2 cut(s) 133, 1147
AcoI YGGCCR 4 cut(s) 168, 613, 728, 951
AcsI RAATTY 3 cut(s) 233, 888, 998
AcuI CTGAAG 4 cut(s) 34, 121, 348, 515
AcvI CACGTG 1 cut(s) 1035
AcyI GRCGYC 1 cut(s) 813
AfaI GTAC 4 cut(s) 192, 304, 627, 1108
AfiI CCNNNNNNNGG 6 cut(s) 177, 259, 576, 622, 726, 1100
AflII CTTAAG 1 cut(s) 911
AflIII ACRYGT 1 cut(s) 1176
AgsI TTSAA 3 cut(s) 508, 1003, 1087
AhdI GACNNNNNGTC 1 cut(s) 472
AhlI ACTAGT 1 cut(s) 187
AjiI CACGTC 1 cut(s) 1288
AjnI CCWGG 2 cut(s) 41, 590
AjuI GAANNNNNNNTTGG 2 cut(s) 839, 871
AloI GAACNNNNNNTCC 2 cut(s) 989, 1021
AluBI AGCT 6 cut(s) 326, 535, 553, 654, 871, 1083
AluI AGCT 6 cut(s) 326, 535, 553, 654, 871, 1083
Alw21I GWGCWC 1 cut(s) 252
Alw26I GTCTC 3 cut(s) 929, 1151, 1178
Alw44I GTGCAC 1 cut(s) 248
AlwI GGATC 2 cut(s) 133, 1147
Aor13HI TCCGGA 2 cut(s) 259, 1136
AoxI GGCC 6 cut(s) 168, 501, 511, 613, 728, 951
ApaLI GTGCAC 1 cut(s) 248
ApeKI GCWGC 1 cut(s) 1029
ApoI RAATTY 3 cut(s) 233, 888, 998
AseI ATTAAT 1 cut(s) 425
Asp700I GAANNNNTTC 1 cut(s) 134
AspLEI GCGC 4 cut(s) 31, 436, 785, 1043
AspS9I GGNCC 1 cut(s) 283
AsuC2I CCSGG 2 cut(s) 352, 941
AsuHPI GGTGA 3 cut(s) 175, 493, 745
AsuII TTCGAA 1 cut(s) 156
AvaII GGWCC 1 cut(s) 283
BaeGI GKGCMC 1 cut(s) 252
BaeI ACNNNNGTAYC 2 cut(s) 1098, 1131
BalI TGGCCA 2 cut(s) 615, 953
BauI CACGAG 1 cut(s) 1051
BbrPI CACGTG 1 cut(s) 1035
BbsI GAAGAC 1 cut(s) 127
Bbv12I GWGCWC 1 cut(s) 252
BbvCI CCTCAGC 1 cut(s) 979
BbvI GCAGC 1 cut(s) 1041
BccI CCATC 3 cut(s) 326, 605, 1231
BceAI ACGGC 3 cut(s) 183, 402, 946
BcgI CGANNNNNNTGC 2 cut(s) 1200, 1234
BciT130I CCWGG 2 cut(s) 43, 592
BcnI CCSGG 2 cut(s) 352, 941
BcoDI GTCTC 3 cut(s) 929, 1151, 1178
BcuI ACTAGT 1 cut(s) 187
BfaI CTAG 3 cut(s) 188, 714, 882
BfmI CTRYAG 1 cut(s) 76
BfoI RGCGCY 1 cut(s) 1044
BfrI CTTAAG 1 cut(s) 911
BglI GCCNNNNNGGC 1 cut(s) 519
BisI GCNGC 2 cut(s) 702, 1030
BlpI GCTNAGC 1 cut(s) 549
BlsI GCNGC 2 cut(s) 703, 1031
Bme1390I CCNGG 4 cut(s) 43, 352, 592, 941
Bme18I GGWCC 1 cut(s) 283
BmeRI GACNNNNNGTC 1 cut(s) 472
BmgBI CACGTC 1 cut(s) 1288
BmgT120I GGNCC 1 cut(s) 283
BmiI GGNNCC 1 cut(s) 808
BmrFI CCNGG 4 cut(s) 43, 352, 592, 941
BmrI ACTGGG 1 cut(s) 186
BmsI GCATC 4 cut(s) 90, 191, 535, 787
BmuI ACTGGG 1 cut(s) 186
BoxI GACNNNNGTC 1 cut(s) 941
BpiI GAAGAC 1 cut(s) 127
Bpu10I CCTNAGC 2 cut(s) 554, 979
Bpu1102I GCTNAGC 1 cut(s) 549
Bpu14I TTCGAA 1 cut(s) 156
BpuEI CTTGAG 2 cut(s) 303, 439
BpuMI CCSGG 2 cut(s) 352, 941
BsaAI YACGTR 1 cut(s) 1035
BsaHI GRCGYC 1 cut(s) 813
BsaI GGTCTC 2 cut(s) 929, 1178
BsaJI CCNNGG 3 cut(s) 616, 692, 939
BsaWI WCCGGW 2 cut(s) 259, 1136
Bsc4I CCNNNNNNNGG 6 cut(s) 177, 259, 576, 622, 726, 1100
Bse118I RCCGGY 3 cut(s) 518, 730, 1207
Bse1I ACTGG 1 cut(s) 181
BseAI TCCGGA 2 cut(s) 259, 1136
BseBI CCWGG 2 cut(s) 43, 592
BseDI CCNNGG 3 cut(s) 616, 692, 939
BseGI GGATG 2 cut(s) 550, 1166
BseLI CCNNNNNNNGG 6 cut(s) 177, 259, 576, 622, 726, 1100
BseMII CTCAG 7 cut(s) 46, 127, 221, 568, 576, 993, 1101
BseNI ACTGG 1 cut(s) 181
BseRI GAGGAG 1 cut(s) 293
BseSI GKGCMC 1 cut(s) 252
BseXI GCAGC 1 cut(s) 1041
BshFI GGCC 6 cut(s) 170, 503, 513, 615, 730, 953
BsiHKAI GWGCWC 1 cut(s) 252
BsiSI CCGG 7 cut(s) 260, 352, 519, 731, 941, 1137, 1208
BslFI GGGAC 4 cut(s) 193, 198, 407, 1298
BslI CCNNNNNNNGG 6 cut(s) 177, 259, 576, 622, 726, 1100
BsmAI GTCTC 3 cut(s) 929, 1151, 1178
BsmFI GGGAC 4 cut(s) 193, 198, 407, 1298
BsmI GAATGC 2 cut(s) 837, 922
BsnI GGCC 6 cut(s) 170, 503, 513, 615, 730, 953
Bso31I GGTCTC 2 cut(s) 929, 1178
Bsp119I TTCGAA 1 cut(s) 156
Bsp1286I GDGCHC 1 cut(s) 252
Bsp13I TCCGGA 2 cut(s) 259, 1136
Bsp1407I TGTACA 1 cut(s) 302
Bsp143I GATC 3 cut(s) 72, 125, 1139
Bsp1720I GCTNAGC 1 cut(s) 549
Bsp19I CCATGG 1 cut(s) 616
BspACI CCGC 7 cut(s) 542, 702, 957, 1077, 1104, 1125, 1282
BspANI GGCC 6 cut(s) 170, 503, 513, 615, 730, 953
BspCNI CTCAG 7 cut(s) 45, 126, 220, 567, 577, 992, 1102
BspEI TCCGGA 2 cut(s) 259, 1136
BspLI GGNNCC 1 cut(s) 808
BspPI GGATC 2 cut(s) 133, 1147
BspQI GCTCTTC 1 cut(s) 861
BspT104I TTCGAA 1 cut(s) 156
BspTI CTTAAG 1 cut(s) 911
BspTNI GGTCTC 2 cut(s) 929, 1178
BsrFI RCCGGY 3 cut(s) 518, 730, 1207
BsrGI TGTACA 1 cut(s) 302
BsrI ACTGG 1 cut(s) 181
BssAI RCCGGY 3 cut(s) 518, 730, 1207
BssECI CCNNGG 3 cut(s) 616, 692, 939
BssMI GATC 3 cut(s) 72, 125, 1139
BssNI GRCGYC 1 cut(s) 813
BssSI CACGAG 1 cut(s) 1051
BssT1I CCWWGG 2 cut(s) 616, 692
Bst2BI CACGAG 1 cut(s) 1051
Bst2UI CCWGG 2 cut(s) 43, 592
Bst4CI ACNGT 5 cut(s) 746, 994, 1198, 1204, 1301
Bst6I CTCTTC 1 cut(s) 861
BstACI GRCGYC 1 cut(s) 813
BstAFI CTTAAG 1 cut(s) 911
BstAUI TGTACA 1 cut(s) 302
BstBAI YACGTR 1 cut(s) 1035
BstBI TTCGAA 1 cut(s) 156
BstC8I GCNNGC 4 cut(s) 967, 1045, 1081, 1209
BstDEI CTNAG 9 cut(s) 32, 113, 207, 549, 554, 585, 979, 1110, 1245
BstDSI CCRYGG 1 cut(s) 616
BstF5I GGATG 2 cut(s) 550, 1166
BstH2I RGCGCY 1 cut(s) 1044
BstHHI GCGC 4 cut(s) 31, 436, 785, 1043
BstKTI GATC 3 cut(s) 75, 128, 1142
BstMAI GTCTC 3 cut(s) 929, 1151, 1178
BstMBI GATC 3 cut(s) 72, 125, 1139
BstMWI GCNNNNNNNGC 5 cut(s) 519, 821, 868, 1038, 1288
BstNI CCWGG 2 cut(s) 43, 592
BstPAI GACNNNNGTC 1 cut(s) 941
BstSCI CCNGG 4 cut(s) 41, 350, 590, 939
BstSFI CTRYAG 1 cut(s) 76
BstSLI GKGCMC 1 cut(s) 252
BstV1I GCAGC 1 cut(s) 1041
BstV2I GAAGAC 1 cut(s) 127
BsuRI GGCC 6 cut(s) 170, 503, 513, 615, 730, 953
BtgI CCRYGG 1 cut(s) 616
BtgZI GCGATG 1 cut(s) 1272
BtrI CACGTC 1 cut(s) 1288
BtsCI GGATG 2 cut(s) 550, 1166
BtsI GCAGTG 2 cut(s) 676, 1116
BtsIMutI CAGTG 7 cut(s) 174, 606, 676, 799, 990, 1116, 1209
Cac8I GCNNGC 4 cut(s) 967, 1045, 1081, 1209
CfoI GCGC 4 cut(s) 31, 436, 785, 1043
Cfr10I RCCGGY 3 cut(s) 518, 730, 1207
Cfr13I GGNCC 1 cut(s) 283
CseI GACGC 1 cut(s) 821
Csp6I GTAC 4 cut(s) 191, 303, 626, 1107
CviAII CATG 4 cut(s) 362, 390, 497, 617
CviQI GTAC 4 cut(s) 191, 303, 626, 1107
DdeI CTNAG 9 cut(s) 32, 113, 207, 549, 554, 585, 979, 1110, 1245
DpnI GATC 3 cut(s) 74, 127, 1141
DpnII GATC 3 cut(s) 72, 125, 1139
DriI GACNNNNNGTC 1 cut(s) 472
EaeI YGGCCR 4 cut(s) 168, 613, 728, 951
Eam1104I CTCTTC 1 cut(s) 861
Eam1105I GACNNNNNGTC 1 cut(s) 472
EarI CTCTTC 1 cut(s) 861
EciI GGCGGA 1 cut(s) 557
Eco130I CCWWGG 2 cut(s) 616, 692
Eco147I AGGCCT 1 cut(s) 503
Eco31I GGTCTC 2 cut(s) 929, 1178
Eco32I GATATC 2 cut(s) 460, 1224
Eco47I GGWCC 1 cut(s) 283
Eco57I CTGAAG 4 cut(s) 34, 121, 348, 515
Eco72I CACGTG 1 cut(s) 1035
EcoRI GAATTC 1 cut(s) 998
EcoRII CCWGG 2 cut(s) 41, 590
EcoRV GATATC 2 cut(s) 460, 1224
EcoT14I CCWWGG 2 cut(s) 616, 692
ErhI CCWWGG 2 cut(s) 616, 692
FaeI CATG 4 cut(s) 365, 393, 500, 620
FaqI GGGAC 4 cut(s) 193, 198, 407, 1298
FatI CATG 4 cut(s) 361, 389, 496, 616
FauI CCCGC 1 cut(s) 1275
FblI GTMKAC 2 cut(s) 741, 828
Fnu4HI GCNGC 2 cut(s) 702, 1030
FokI GGATG 2 cut(s) 557, 1153
Fsp4HI GCNGC 2 cut(s) 702, 1030
FspBI CTAG 3 cut(s) 188, 714, 882
FspI TGCGCA 1 cut(s) 435
GlaI GCGC 4 cut(s) 30, 435, 784, 1042
GluI GCNGC 2 cut(s) 702, 1030
HaeII RGCGCY 1 cut(s) 1044
HaeIII GGCC 6 cut(s) 170, 503, 513, 615, 730, 953
HapII CCGG 7 cut(s) 260, 352, 519, 731, 941, 1137, 1208
HgaI GACGC 1 cut(s) 821
HhaI GCGC 4 cut(s) 31, 436, 785, 1043
Hin1I GRCGYC 1 cut(s) 813
Hin1II CATG 4 cut(s) 365, 393, 500, 620
Hin6I GCGC 4 cut(s) 29, 434, 783, 1041
HinP1I GCGC 4 cut(s) 29, 434, 783, 1041
HincII GTYRAC 2 cut(s) 121, 742
HindII GTYRAC 2 cut(s) 121, 742
HinfI GANTC 7 cut(s) 62, 86, 117, 439, 473, 580, 587
HpaII CCGG 7 cut(s) 260, 352, 519, 731, 941, 1137, 1208
HphI GGTGA 3 cut(s) 175, 493, 745
Hpy166II GTNNAC 6 cut(s) 121, 250, 303, 606, 742, 829
Hpy188I TCNGA 6 cut(s) 97, 116, 200, 210, 688, 1171
Hpy188III TCNNGA 4 cut(s) 260, 418, 584, 1137
Hpy8I GTNNAC 6 cut(s) 121, 250, 303, 606, 742, 829
Hpy99I CGWCG 1 cut(s) 815
HpyAV CCTTC 5 cut(s) 222, 514, 539, 615, 730
HpyCH4III ACNGT 5 cut(s) 746, 994, 1198, 1204, 1301
HpyCH4IV ACGT 3 cut(s) 1034, 1178, 1287
HpyCH4V TGCA 3 cut(s) 250, 383, 824
HpyF10VI GCNNNNNNNGC 5 cut(s) 519, 821, 868, 1038, 1288
HpyF3I CTNAG 9 cut(s) 32, 113, 207, 549, 554, 585, 979, 1110, 1245
HpySE526I ACGT 3 cut(s) 1034, 1178, 1287
Hsp92I GRCGYC 1 cut(s) 813
Hsp92II CATG 4 cut(s) 365, 393, 500, 620
HspAI GCGC 4 cut(s) 29, 434, 783, 1041
Kpn2I TCCGGA 2 cut(s) 259, 1136
KroI GCCGGC 1 cut(s) 1207
KroNI GCCGGC 1 cut(s) 1209
Kzo9I GATC 3 cut(s) 72, 125, 1139
LguI GCTCTTC 1 cut(s) 861
LmnI GCTCC 2 cut(s) 404, 1038
Lsp1109I GCAGC 1 cut(s) 1041
LweI GCATC 4 cut(s) 90, 191, 535, 787
MaeI CTAG 3 cut(s) 188, 714, 882
MaeII ACGT 3 cut(s) 1034, 1178, 1287
MaeIII GTNAC 5 cut(s) 163, 671, 943, 1114, 1198
MalI GATC 3 cut(s) 74, 127, 1141
MboI GATC 3 cut(s) 72, 125, 1139
MboII GAAGA 4 cut(s) 40, 127, 341, 878
MhlI GDGCHC 1 cut(s) 252
MlsI TGGCCA 2 cut(s) 615, 953
MluCI AATT 7 cut(s) 91, 233, 426, 523, 888, 998, 1161
MluNI TGGCCA 2 cut(s) 615, 953
MlyI GAGTC 4 cut(s) 56, 126, 482, 596
MmeI TCCRAC 2 cut(s) 866, 1161
MnlI CCTC 9 cut(s) 256, 271, 274, 327, 493, 592, 827, 988, 1105
Mox20I TGGCCA 2 cut(s) 615, 953
MroI TCCGGA 2 cut(s) 259, 1136
MroNI GCCGGC 1 cut(s) 1207
MroXI GAANNNNTTC 1 cut(s) 134
MscI TGGCCA 2 cut(s) 615, 953
MseI TTAA 4 cut(s) 425, 663, 912, 1303
MslI CAYNNNNRTG 1 cut(s) 1147
Msp20I TGGCCA 2 cut(s) 615, 953
MspA1I CMGCKG 1 cut(s) 1282
MspCI CTTAAG 1 cut(s) 911
MspI CCGG 7 cut(s) 260, 352, 519, 731, 941, 1137, 1208
MspR9I CCNGG 4 cut(s) 43, 352, 592, 941
Mva1269I GAATGC 2 cut(s) 837, 922
MvaI CCWGG 2 cut(s) 43, 592
MwoI GCNNNNNNNGC 5 cut(s) 519, 821, 868, 1038, 1288
NaeI GCCGGC 1 cut(s) 1209
NciI CCSGG 2 cut(s) 352, 941
NcoI CCATGG 1 cut(s) 616
NdeII GATC 3 cut(s) 72, 125, 1139
NgoMIV GCCGGC 1 cut(s) 1207
NlaIII CATG 4 cut(s) 365, 393, 500, 620
NlaIV GGNNCC 1 cut(s) 808
NmuCI GTSAC 4 cut(s) 163, 671, 943, 1114
NsbI TGCGCA 1 cut(s) 435
NspV TTCGAA 1 cut(s) 156
PceI AGGCCT 1 cut(s) 503
PciSI GCTCTTC 1 cut(s) 861
PctI GAATGC 2 cut(s) 837, 922
PdiI GCCGGC 1 cut(s) 1209
PdmI GAANNNNTTC 1 cut(s) 134
PfeI GAWTC 3 cut(s) 86, 439, 580
PkrI GCNGC 2 cut(s) 703, 1031
PleI GAGTC 4 cut(s) 56, 125, 481, 595
PmaCI CACGTG 1 cut(s) 1035
PmlI CACGTG 1 cut(s) 1035
PpsI GAGTC 4 cut(s) 56, 125, 481, 595
Ppu21I YACGTR 1 cut(s) 1035
PshAI GACNNNNGTC 1 cut(s) 941
PshBI ATTAAT 1 cut(s) 425
PsiI TTATAA 1 cut(s) 1296
Psp6I CCWGG 2 cut(s) 41, 590
PspCI CACGTG 1 cut(s) 1035
PspGI CCWGG 2 cut(s) 41, 590
PspN4I GGNNCC 1 cut(s) 808
PspPI GGNCC 1 cut(s) 283
RsaI GTAC 4 cut(s) 192, 304, 627, 1108
RsaNI GTAC 4 cut(s) 191, 303, 626, 1107
RseI CAYNNNNRTG 1 cut(s) 1147
SalI GTCGAC 1 cut(s) 740
SapI GCTCTTC 1 cut(s) 861
SaqAI TTAA 4 cut(s) 425, 663, 912, 1303
SatI GCNGC 2 cut(s) 702, 1030
Sau3AI GATC 3 cut(s) 72, 125, 1139
Sau96I GGNCC 1 cut(s) 283
SchI GAGTC 4 cut(s) 56, 126, 482, 596
ScrFI CCNGG 4 cut(s) 43, 352, 592, 941
SduI GDGCHC 1 cut(s) 252
SfaNI GCATC 4 cut(s) 90, 191, 535, 787
SfcI CTRYAG 1 cut(s) 76
SfuI TTCGAA 1 cut(s) 156
SinI GGWCC 1 cut(s) 283
SmiMI CAYNNNNRTG 1 cut(s) 1147
SmlI CTYRAG 3 cut(s) 318, 418, 911
SmoI CTYRAG 3 cut(s) 318, 418, 911
SpeI ACTAGT 1 cut(s) 187
Sse9I AATT 7 cut(s) 91, 233, 426, 523, 888, 998, 1161
SseBI AGGCCT 1 cut(s) 503
SsiI CCGC 7 cut(s) 542, 702, 957, 1077, 1104, 1125, 1282
SspI AATATT 1 cut(s) 1133
SspMI CTAG 3 cut(s) 188, 714, 882
StuI AGGCCT 1 cut(s) 503
StyD4I CCNGG 4 cut(s) 41, 350, 590, 939
StyI CCWWGG 2 cut(s) 616, 692
TaaI ACNGT 5 cut(s) 746, 994, 1198, 1204, 1301
TaiI ACGT 3 cut(s) 1037, 1181, 1290
TaqI TCGA 7 cut(s) 128, 156, 465, 597, 741, 906, 1220
TasI AATT 7 cut(s) 91, 233, 426, 523, 888, 998, 1161
TatI WGTACW 2 cut(s) 190, 302
TauI GCSGC 1 cut(s) 704
TfiI GAWTC 3 cut(s) 86, 439, 580
Tru1I TTAA 4 cut(s) 425, 663, 912, 1303
Tru9I TTAA 4 cut(s) 425, 663, 912, 1303
TscAI CASTG 7 cut(s) 181, 613, 676, 799, 997, 1123, 1209
TseFI GTSAC 4 cut(s) 163, 671, 943, 1114
TseI GCWGC 1 cut(s) 1029
Tsp45I GTSAC 4 cut(s) 163, 671, 943, 1114
TspDTI ATGAA 2 cut(s) 285, 550
TspGWI ACGGA 2 cut(s) 138, 1031
TspRI CASTG 7 cut(s) 181, 613, 676, 799, 997, 1123, 1209
Vha464I CTTAAG 1 cut(s) 911
VneI GTGCAC 1 cut(s) 248
VpaK11BI GGWCC 1 cut(s) 283
VspI ATTAAT 1 cut(s) 425
XapI RAATTY 3 cut(s) 233, 888, 998
XmiI GTMKAC 2 cut(s) 741, 828
XmnI GAANNNNTTC 1 cut(s) 134
XspI CTAG 3 cut(s) 188, 714, 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.