RLG00000029310

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000217
Physical Location & Seq
Forward (+)
36368502 .. 36370529
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029310

Sequence Viewer

Length: 1851 bp
ATGACGGAGGGCGAGATTAATAGAACAGAGAATCCGAGTGATGAAACCACATTACCAAGATTTGTGGTTCTGAAATCAAACAACAACAACAAATACTTGAGCTACACAAAGATTAATGAGGAAAATGTTGATCAGGTGCCCATGGGGCTTCTTAAATTCTCTGGAGAAGAAGTCGGGAGCCATTATGCAAAGTTCGAAGTGGAGATGGCAAAGAGTAAATTAAATGATCCAATTGTTGACGAAGAGAACGATGATGATGCCATCAGCGATGCTGAGAATGATGATACCGAACAGCATCAAAATCAGGAAGTCATCGATACTCATCCAGATGCTGATGTCATCGAGCACCTTCAAGATCACGATGCCACTGATGATCCTCATAACAATGGCAACCGGAGATTAGATGAAGGTTTTCAAGATCAGCATCATGGTAGAGATGAATCAAACATCCCTGAGGAACACCAAGCAAATGAATTAGTGAATCACGATGATGATGAGGAGATCAACAACGACGACGAAGAAGATGATGATAATAATAATCGTCGTGCTCGTGCTCATCCTTGTCCTCCACGAAACGAAATGGATAGGAAGAGAATATTAGTCCGTCTTCGCCATGTCCAACTCGGACACTACGTAGGCTTGCGGAGGTACAATGTCGACGCACAACACTTCATGGGAGGCTTATCCACTTCACCTGACAATGATACCAACAGCAGTATGGATGAGAATACTACTAGTATTAATGAACAAACTAACCGTACAGGTGAGAATAGTAACAGTGCGGATGATCAGACTAATAATAACAATACAAATGATCAAACTAACTATACAAATGATATAGCACCGTGTGATGTGTTCATTGTCATTAATTGGGAATCATTGGTGATATTTCCCAAACATGTGGCATTCAGGGGAGACAATGGTGTCTTCCTTAGCACTGATAGTCGCAGCTGGTATGAAGGTCACATGTGTTTGGAGTACCGAGCCGATGACTTTAGAGATGCAATGGCAGCTCATGAGATTTTTACTAATCCAGACGGAAGCATCCGCATAAAATCCAATTATTTGGGCAAGTTTTGGTGTCGTAGGCCGGGTGACCCTAACTGGGTCGTTCCTGACTCGGATGACCCGACTCGCAACGACACGTTGTTTCAGCCGATTAAAATTGACGAAAACGAATTTGCTCTCCGCAATATGGGAAACTTTCACATCTGCAAGAGATATACACTCGGTTGCATGGTCGGTTTCACTGCAAATGTCACCAATATTCCCATATATGCCCACCTGAGAATTGAAGAGATTGTTAAGTCAAGAATTGTGTATGATGTTAGTCATCACCTCACGCAAGCTAGGATCTACGATTATGAAAACGAGGTCGAAATTGCCATTGGAGAGGCCGTGAATTTGACCCAAGAAACCACTGGGATGACATTTAATCTATCATACAAAAGGACCAAGAGCACGTGTTGGAATGATGCGAAAACCATGTCTATCAAGTCTGGCGGCGTTAAAACAACCATGCAAGCTGGTGTTCCGGTAATTGGAGACGACGAAAAGCTTGTAATTAGTTCAAGTGAGTTTACGAGTGGATCAACAATATTCAAGTGGGGAGAAGTTGAGACATGGGAAACTCCAGTGCAGAGCGTGTGCAGAGTTGACGTGCCGGCAAAGACTAAGTTGAATGTGAGTCTTGTGGCGAATAAAGCTTCATATGAAGTTCCATTTAACTATTCTCGCCGCGACACTCGTACCAATGGTCAAATAAGCATTGACAACGACAAGGATGATGGCATTTACATTGGGCTCAATTTCTATAACTTCAAGTACAACATCAAGCAAAAAACTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

617

Amino Acids

70.34

Weight (kDa)

4.73

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 300 - 412 3.8e-14 Agglutinin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 923
AccB1I GGYRCC 1 cut(s) 136
AccI GTMKAC 1 cut(s) 657
AccII CGCG 1 cut(s) 1740
AciI CCGC 6 cut(s) 643, 782, 1048, 1189, 1503, 1738
AclWI GGATC 4 cut(s) 221, 368, 1361, 1597
AcsI RAATTY 3 cut(s) 155, 1178, 1402
AcvI CACGTG 1 cut(s) 1464
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 5 cut(s) 650, 760, 980, 1750, 1826
AfiI CCNNNNNNNGG 3 cut(s) 1105, 1195, 1541
AflIII ACRYGT 4 cut(s) 898, 966, 1143, 1463
AgsI TTSAA 7 cut(s) 353, 416, 1295, 1572, 1603, 1681, 1822
AhlI ACTAGT 1 cut(s) 734
AjiI CACGTC 1 cut(s) 1660
AjuI GAANNNNNNNTTGG 2 cut(s) 1371, 1403
AloI GAACNNNNNNTCC 2 cut(s) 16, 48
AluBI AGCT 7 cut(s) 102, 951, 1013, 1349, 1526, 1558, 1706
AluI AGCT 7 cut(s) 102, 951, 1013, 1349, 1526, 1558, 1706
Alw21I GWGCWC 4 cut(s) 348, 550, 556, 1463
Alw26I GTCTC 3 cut(s) 909, 1539, 1613
AlwI GGATC 4 cut(s) 221, 368, 1361, 1597
AlwNI CAGNNNCTG 1 cut(s) 332
AoxI GGCC 2 cut(s) 1088, 1395
ApeKI GCWGC 2 cut(s) 948, 1010
ApoI RAATTY 3 cut(s) 155, 1178, 1402
ArsI GACNNNNNNTTYG 2 cut(s) 1472, 1504
AseI ATTAAT 4 cut(s) 18, 114, 741, 867
Asp700I GAANNNNTTC 1 cut(s) 411
AspS9I GGNCC 1 cut(s) 1452
AsuC2I CCSGG 1 cut(s) 1092
AsuHPI GGTGA 6 cut(s) 684, 776, 895, 1106, 1252, 1328
AsuII TTCGAA 1 cut(s) 195
AvaII GGWCC 1 cut(s) 1452
AxyI CCTNAGG 1 cut(s) 453
BaeGI GKGCMC 1 cut(s) 141
BaeI ACNNNNGTAYC 2 cut(s) 1732, 1765
BanI GGYRCC 1 cut(s) 136
BanII GRGCYC 1 cut(s) 1806
BauI CACGAG 1 cut(s) 549
BbrPI CACGTG 1 cut(s) 1464
BbsI GAAGAC 2 cut(s) 599, 919
Bbv12I GWGCWC 4 cut(s) 348, 550, 556, 1463
BbvI GCAGC 2 cut(s) 960, 1022
BccI CCATC 3 cut(s) 199, 269, 1781
BceAI ACGGC 1 cut(s) 1382
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BclI TGATCA 3 cut(s) 130, 787, 814
BcnI CCSGG 1 cut(s) 1092
BcoDI GTCTC 3 cut(s) 909, 1539, 1613
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 2 cut(s) 735, 1350
BglI GCCNNNNNGGC 1 cut(s) 145
BisI GCNGC 4 cut(s) 949, 1011, 1504, 1738
BlsI GCNGC 4 cut(s) 950, 1012, 1505, 1739
Bme1390I CCNGG 1 cut(s) 1092
Bme18I GGWCC 1 cut(s) 1452
BmgBI CACGTC 1 cut(s) 1660
BmgT120I GGNCC 1 cut(s) 1452
BmiI GGNNCC 2 cut(s) 138, 179
BmrFI CCNGG 1 cut(s) 1092
BmrI ACTGGG 2 cut(s) 1114, 1431
BmsI GCATC 9 cut(s) 247, 259, 304, 319, 352, 433, 991, 1053, 1465
BmuI ACTGGG 2 cut(s) 1114, 1431
BpiI GAAGAC 2 cut(s) 599, 919
BpmI CTGGAG 2 cut(s) 183, 1617
Bpu10I CCTNAGC 1 cut(s) 932
Bpu14I TTCGAA 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 118
BpuMI CCSGG 1 cut(s) 1092
Bsa29I ATCGAT 1 cut(s) 315
BsaAI YACGTR 2 cut(s) 634, 1464
BsaBI GATNNNNATC 2 cut(s) 321, 423
BsaJI CCNNGG 1 cut(s) 141
BsaWI WCCGGW 2 cut(s) 393, 1534
BsaXI ACNNNNNCTCC 4 cut(s) 156, 186, 1383, 1413
Bsc4I CCNNNNNNNGG 3 cut(s) 1105, 1195, 1541
Bse118I RCCGGY 1 cut(s) 1663
Bse1I ACTGG 3 cut(s) 1109, 1426, 1634
Bse21I CCTNAGG 1 cut(s) 453
Bse3DI GCAATG 1 cut(s) 1011
Bse8I GATNNNNATC 2 cut(s) 321, 423
BseCI ATCGAT 1 cut(s) 315
BseDI CCNNGG 1 cut(s) 141
BseGI GGATG 9 cut(s) 322, 447, 556, 727, 790, 1044, 1129, 1431, 1789
BseJI GATNNNNATC 2 cut(s) 321, 423
BseLI CCNNNNNNNGG 3 cut(s) 1105, 1195, 1541
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 3 cut(s) 264, 444, 1277
BseNI ACTGG 3 cut(s) 1109, 1426, 1634
BseRI GAGGAG 1 cut(s) 512
BseSI GKGCMC 1 cut(s) 141
BseXI GCAGC 2 cut(s) 960, 1022
BsgI GTGCAG 2 cut(s) 1658, 1669
Bsh1236I CGCG 1 cut(s) 1740
BshFI GGCC 2 cut(s) 1090, 1397
BshNI GGYRCC 1 cut(s) 136
BshVI ATCGAT 1 cut(s) 315
BsiHKAI GWGCWC 4 cut(s) 348, 550, 556, 1463
BsiSI CCGG 4 cut(s) 394, 1091, 1535, 1664
BslI CCNNNNNNNGG 3 cut(s) 1105, 1195, 1541
BsmAI GTCTC 3 cut(s) 909, 1539, 1613
BsmBI CGTCTC 1 cut(s) 1539
BsmI GAATGC 1 cut(s) 905
BsnI GGCC 2 cut(s) 1090, 1397
Bsp119I TTCGAA 1 cut(s) 195
Bsp1286I GDGCHC 6 cut(s) 141, 348, 550, 556, 1463, 1806
Bsp19I CCATGG 1 cut(s) 141
BspACI CCGC 6 cut(s) 643, 782, 1048, 1189, 1503, 1738
BspANI GGCC 2 cut(s) 1090, 1397
BspCNI CTCAG 3 cut(s) 265, 445, 1278
BspDI ATCGAT 1 cut(s) 315
BspFNI CGCG 1 cut(s) 1740
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 2 cut(s) 138, 179
BspPI GGATC 4 cut(s) 221, 368, 1361, 1597
BspT104I TTCGAA 1 cut(s) 195
BspT107I GGYRCC 1 cut(s) 136
BsrDI GCAATG 1 cut(s) 1011
BsrFI RCCGGY 1 cut(s) 1663
BsrI ACTGG 3 cut(s) 1109, 1426, 1634
BssAI RCCGGY 1 cut(s) 1663
BssECI CCNNGG 1 cut(s) 141
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 1 cut(s) 141
Bst2BI CACGAG 1 cut(s) 549
Bst4CI ACNGT 3 cut(s) 758, 779, 846
Bst6I CTCTTC 3 cut(s) 237, 584, 1290
BstBAI YACGTR 2 cut(s) 634, 1464
BstBI TTCGAA 1 cut(s) 195
BstC8I GCNNGC 4 cut(s) 641, 1347, 1524, 1665
BstDEI CTNAG 5 cut(s) 273, 453, 932, 1286, 1674
BstDSI CCRYGG 1 cut(s) 141
BstEII GGTNACC 1 cut(s) 1094
BstF5I GGATG 9 cut(s) 322, 447, 556, 727, 790, 1044, 1129, 1431, 1789
BstFNI CGCG 1 cut(s) 1740
BstMAI GTCTC 3 cut(s) 909, 1539, 1613
BstMWI GCNNNNNNNGC 3 cut(s) 145, 1010, 1703
BstNSI RCATGY 2 cut(s) 902, 970
BstPI GGTNACC 1 cut(s) 1094
BstSCI CCNGG 1 cut(s) 1090
BstSLI GKGCMC 1 cut(s) 141
BstSNI TACGTA 1 cut(s) 634
BstUI CGCG 1 cut(s) 1740
BstV1I GCAGC 2 cut(s) 960, 1022
BstV2I GAAGAC 2 cut(s) 599, 919
BstX2I RGATCY 1 cut(s) 1353
BstXI CCANNNNNNTGG 2 cut(s) 901, 1066
BstYI RGATCY 1 cut(s) 1353
Bsu15I ATCGAT 1 cut(s) 315
Bsu36I CCTNAGG 1 cut(s) 453
BsuRI GGCC 2 cut(s) 1090, 1397
BsuTUI ATCGAT 1 cut(s) 315
BtgI CCRYGG 1 cut(s) 141
BtgZI GCGATG 1 cut(s) 282
BtrI CACGTC 1 cut(s) 1660
BtsCI GGATG 9 cut(s) 322, 447, 556, 727, 790, 1044, 1129, 1431, 1789
BtsI GCAGTG 1 cut(s) 1248
BtsIMutI CAGTG 6 cut(s) 366, 784, 936, 1248, 1419, 1641
Cac8I GCNNGC 4 cut(s) 641, 1347, 1524, 1665
CaiI CAGNNNCTG 1 cut(s) 332
CciI TCATGA 1 cut(s) 1015
Cfr10I RCCGGY 1 cut(s) 1663
Cfr13I GGNCC 1 cut(s) 1452
ClaI ATCGAT 1 cut(s) 315
CseI GACGC 1 cut(s) 668
Csp6I GTAC 5 cut(s) 649, 759, 979, 1749, 1825
CspCI CAANNNNNGTGG 2 cut(s) 45, 80
CviQI GTAC 5 cut(s) 649, 759, 979, 1749, 1825
DdeI CTNAG 5 cut(s) 273, 453, 932, 1286, 1674
DraIII CACNNNGTG 1 cut(s) 848
DrdI GACNNNNNNGTC 1 cut(s) 923
DseDI GACNNNNNNGTC 1 cut(s) 923
Eam1104I CTCTTC 3 cut(s) 237, 584, 1290
EarI CTCTTC 3 cut(s) 237, 584, 1290
Eco105I TACGTA 1 cut(s) 634
Eco130I CCWWGG 1 cut(s) 141
Eco24I GRGCYC 1 cut(s) 1806
Eco47I GGWCC 1 cut(s) 1452
Eco72I CACGTG 1 cut(s) 1464
Eco81I CCTNAGG 1 cut(s) 453
Eco91I GGTNACC 1 cut(s) 1094
EcoO65I GGTNACC 1 cut(s) 1094
EcoT14I CCWWGG 1 cut(s) 141
EcoT38I GRGCYC 1 cut(s) 1806
ErhI CCWWGG 1 cut(s) 141
Esp3I CGTCTC 1 cut(s) 1539
FauNDI CATATG 1 cut(s) 1711
FbaI TGATCA 3 cut(s) 130, 787, 814
FblI GTMKAC 1 cut(s) 657
Fnu4HI GCNGC 4 cut(s) 949, 1011, 1504, 1738
FokI GGATG 9 cut(s) 309, 434, 543, 734, 797, 1031, 1136, 1438, 1796
FriOI GRGCYC 1 cut(s) 1806
Fsp4HI GCNGC 4 cut(s) 949, 1011, 1504, 1738
FspBI CTAG 2 cut(s) 735, 1350
GluI GCNGC 4 cut(s) 949, 1011, 1504, 1738
GsuI CTGGAG 2 cut(s) 183, 1617
HaeIII GGCC 2 cut(s) 1090, 1397
HapII CCGG 4 cut(s) 394, 1091, 1535, 1664
HgaI GACGC 1 cut(s) 668
HincII GTYRAC 3 cut(s) 238, 658, 1657
HindII GTYRAC 3 cut(s) 238, 658, 1657
HindIII AAGCTT 2 cut(s) 1556, 1704
HinfI GANTC 7 cut(s) 31, 440, 481, 875, 1118, 1132, 1687
HpaII CCGG 4 cut(s) 394, 1091, 1535, 1664
HphI GGTGA 6 cut(s) 684, 776, 895, 1106, 1252, 1328
Hpy166II GTNNAC 4 cut(s) 238, 658, 1581, 1657
Hpy188I TCNGA 6 cut(s) 36, 72, 626, 792, 1123, 1850
Hpy8I GTNNAC 4 cut(s) 238, 658, 1581, 1657
Hpy99I CGWCG 5 cut(s) 515, 518, 546, 662, 1553
HpyAV CCTTC 3 cut(s) 359, 401, 953
HpyCH4III ACNGT 3 cut(s) 758, 779, 846
HpyCH4IV ACGT 4 cut(s) 633, 1145, 1463, 1659
HpyCH4V TGCA 8 cut(s) 188, 1004, 1215, 1236, 1253, 1522, 1639, 1650
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 1010, 1703
HpyF3I CTNAG 5 cut(s) 273, 453, 932, 1286, 1674
HpySE526I ACGT 4 cut(s) 633, 1145, 1463, 1659
KroI GCCGGC 1 cut(s) 1663
KroNI GCCGGC 1 cut(s) 1665
Ksp22I TGATCA 3 cut(s) 130, 787, 814
LmnI GCTCC 1 cut(s) 177
Lsp1109I GCAGC 2 cut(s) 960, 1022
LweI GCATC 9 cut(s) 247, 259, 304, 319, 352, 433, 991, 1053, 1465
MaeI CTAG 2 cut(s) 735, 1350
MaeII ACGT 4 cut(s) 633, 1145, 1463, 1659
MaeIII GTNAC 4 cut(s) 773, 962, 1094, 1258
MboII GAAGA 8 cut(s) 179, 254, 530, 533, 599, 601, 919, 1307
MfeI CAATTG 1 cut(s) 231
MflI RGATCY 1 cut(s) 1353
MhlI GDGCHC 6 cut(s) 141, 348, 550, 556, 1463, 1806
MlyI GAGTC 3 cut(s) 1112, 1126, 1696
MmeI TCCRAC 2 cut(s) 643, 1448
MroNI GCCGGC 1 cut(s) 1663
MroXI GAANNNNTTC 1 cut(s) 411
MslI CAYNNNNRTG 4 cut(s) 327, 384, 489, 1424
MspA1I CMGCKG 1 cut(s) 951
MspI CCGG 4 cut(s) 394, 1091, 1535, 1664
MspR9I CCNGG 1 cut(s) 1092
MunI CAATTG 1 cut(s) 231
Mva1269I GAATGC 1 cut(s) 905
MvnI CGCG 1 cut(s) 1740
MwoI GCNNNNNNNGC 3 cut(s) 145, 1010, 1703
NaeI GCCGGC 1 cut(s) 1665
NciI CCSGG 1 cut(s) 1092
NcoI CCATGG 1 cut(s) 141
NdeI CATATG 1 cut(s) 1711
NgoMIV GCCGGC 1 cut(s) 1663
NlaIV GGNNCC 2 cut(s) 138, 179
NmuCI GTSAC 3 cut(s) 962, 1094, 1258
NspI RCATGY 2 cut(s) 902, 970
NspV TTCGAA 1 cut(s) 195
PagI TCATGA 1 cut(s) 1015
PciI ACATGT 2 cut(s) 898, 966
PcsI WCGNNNNNNNCGW 4 cut(s) 246, 547, 630, 1127
PctI GAATGC 1 cut(s) 905
PdiI GCCGGC 1 cut(s) 1665
PdmI GAANNNNTTC 1 cut(s) 411
PfeI GAWTC 4 cut(s) 31, 440, 481, 875
PkrI GCNGC 4 cut(s) 950, 1012, 1505, 1739
PleI GAGTC 3 cut(s) 1112, 1126, 1695
PmaCI CACGTG 1 cut(s) 1464
PmlI CACGTG 1 cut(s) 1464
PpsI GAGTC 3 cut(s) 1112, 1126, 1695
Ppu21I YACGTR 2 cut(s) 634, 1464
PscI ACATGT 2 cut(s) 898, 966
PshBI ATTAAT 4 cut(s) 18, 114, 741, 867
PspCI CACGTG 1 cut(s) 1464
PspEI GGTNACC 1 cut(s) 1094
PspN4I GGNNCC 2 cut(s) 138, 179
PspPI GGNCC 1 cut(s) 1452
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 1 cut(s) 1353
PvuII CAGCTG 1 cut(s) 951
RsaI GTAC 5 cut(s) 650, 760, 980, 1750, 1826
RsaNI GTAC 5 cut(s) 649, 759, 979, 1749, 1825
RseI CAYNNNNRTG 4 cut(s) 327, 384, 489, 1424
SalI GTCGAC 1 cut(s) 656
SatI GCNGC 4 cut(s) 949, 1011, 1504, 1738
Sau96I GGNCC 1 cut(s) 1452
SchI GAGTC 3 cut(s) 1112, 1126, 1696
ScrFI CCNGG 1 cut(s) 1092
SduI GDGCHC 6 cut(s) 141, 348, 550, 556, 1463, 1806
SfaNI GCATC 9 cut(s) 247, 259, 304, 319, 352, 433, 991, 1053, 1465
SfuI TTCGAA 1 cut(s) 195
SinI GGWCC 1 cut(s) 1452
SmiMI CAYNNNNRTG 4 cut(s) 327, 384, 489, 1424
SmlI CTYRAG 1 cut(s) 97
SmoI CTYRAG 1 cut(s) 97
SnaBI TACGTA 1 cut(s) 634
SpeI ACTAGT 1 cut(s) 734
SsiI CCGC 6 cut(s) 643, 782, 1048, 1189, 1503, 1738
SspI AATATT 3 cut(s) 597, 1267, 1599
SspMI CTAG 2 cut(s) 735, 1350
StyD4I CCNGG 1 cut(s) 1090
StyI CCWWGG 1 cut(s) 141
TaaI ACNGT 3 cut(s) 758, 779, 846
TaiI ACGT 4 cut(s) 636, 1148, 1466, 1662
TaqI TCGA 5 cut(s) 195, 315, 342, 657, 1377
TatI WGTACW 1 cut(s) 1824
TauI GCSGC 2 cut(s) 1506, 1740
TfiI GAWTC 4 cut(s) 31, 440, 481, 875
TscAI CASTG 6 cut(s) 373, 784, 943, 1255, 1426, 1641
TseFI GTSAC 3 cut(s) 962, 1094, 1258
TseI GCWGC 2 cut(s) 948, 1010
Tsp45I GTSAC 3 cut(s) 962, 1094, 1258
TspGWI ACGGA 3 cut(s) 20, 593, 1053
TspRI CASTG 6 cut(s) 373, 784, 943, 1255, 1426, 1641
VpaK11BI GGWCC 1 cut(s) 1452
VspI ATTAAT 4 cut(s) 18, 114, 741, 867
XapI RAATTY 3 cut(s) 155, 1178, 1402
XceI RCATGY 2 cut(s) 902, 970
XcmI CCANNNNNNNNNTGG 2 cut(s) 715, 1418
XmiI GTMKAC 1 cut(s) 657
XmnI GAANNNNTTC 1 cut(s) 411
XspI CTAG 2 cut(s) 735, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.