RLG00000036313

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000217
Physical Location & Seq
Forward (+)
78961119 .. 78962844
1726 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036313

Sequence Viewer

Length: 1359 bp
ATGGGCCAGAATAGCGGGTACATCACTCCGGAGGCTGATGAACCAGAAGAAGACCAATCGAAATGGTCATGTACATTGTTCGAGCCCAGAGCTGTAGATGGCAATCCCGACCGCGTTCGGTTGTTCCATGTCCAGCGACAGCAATATCCAGTCGCAGTTGGTCACCCTATTCATTTTTGGGTAGGCTACAACAATCCAGGCCAACAGGATATCATGGATATCATTGACCTTGAATCGTTAGTTATATTGCCGAGGCATGTGGCATTCAAAGGAGACAACGGCAAATATCTTGGCATGGAAGACCAAAGTCTGCTATTCGCTTCCACCGATAAGGGGACTGCAACCGTGTGGTTTGAGGTCCGCACAGATGGTCATGGAAGGGCCCAGATCAAATCCTACAAAACTAAAACTTTTTTGAGGTACGACCAGAAAAAGAATGGGATTTGGGCTGACACAACCAACACCACCGACGACCAGACAACATTTTGGCCGGTAAAGGTGGACAAAAATGTCGTTGCACTCCGCAGCTTCGTTAATGACAATTTCTGCGGGCAGATTGAGAATAAGGCATATCTCAATGCTGCCTTCCCCACCATTTCCAAAGAGTCACGTCTGGTATTGGAAGAACTCGTGCTCTCAAGGAGAATCTACAATACTAATTTTGACCTTGACAATGCCGTAGTTTATGGGGAAACTCCCATGACAATGGCCACTACAAACGCCAGTAACAACACGCCGGTGGACAATATTGTGGAGTTCAAATTCACGTACAAAGAGAGTAAGAGCAGCACGTGGACTTCCAGCCACTCCTGGAAGCTGGGCATGAGTGTTGAATCCAAGCTCAAAATTCCATATTTCGGAGGCAGCAAAGTCACAATTTCTGGTGAGTACTCGGGATCCTACCAGTGGGGAGAAACAATTACGTCCGAAAATACATTGGAGACCACGTACAAGGTTGTTGTGCCAGCAAAGGCTTCCATATCGGTGAGCTTGATGGCGACCAAGGGTTCCTGCGACATTCCCTACTCGTATTATCAGCGGGATGTGCTTTACAACGGCAAAGCAGTTGTGTACAAGAAGGATGACGGTCTTTACACTGGTGTGAATTCCTACAACTTTAGATATGAAGTTGTACAAACAAGCAAAGAGACATCTGGGACTAATGAACCAACCACAATCACCACATATAAGGAAGATAAGATAGTGATGCCGTCCGAGGCAACCCAAGGACCAGTGAAGAAGACCACAAAGGAAAATGGCCATGTGCTTCTACAAAGGGAGGAGACCACCCAAGAACAAAAGTTGTCATTGCCATTGGAGAAGATGGCAGATGATGAAATACAAACACTGTCACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

453

Amino Acids

51.01

Weight (kDa)

5.47

Isoelectric Point (pI)

27.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 3 - 49 8.2e-06 Agglutinin domain
Aerolysin PF01117 220 - 344 3.2e-07 Aerolysin toxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 509
AccII CGCG 1 cut(s) 114
AccIII TCCGGA 1 cut(s) 28
AciI CCGC 6 cut(s) 15, 112, 361, 523, 549, 1039
AclWI GGATC 2 cut(s) 891, 904
AcoI YGGCCR 3 cut(s) 488, 708, 1258
AcsI RAATTY 3 cut(s) 761, 846, 1105
AcvI CACGTG 1 cut(s) 792
AfaI GTAC 8 cut(s) 20, 73, 422, 770, 890, 950, 1073, 1134
AfiI CCNNNNNNNGG 3 cut(s) 333, 857, 906
AgsI TTSAA 4 cut(s) 233, 268, 760, 833
AjiI CACGTC 1 cut(s) 611
AjnI CCWGG 2 cut(s) 196, 809
AleI CACNNNNGTG 2 cut(s) 737, 1100
AluBI AGCT 5 cut(s) 92, 528, 817, 841, 990
AluI AGCT 5 cut(s) 92, 528, 817, 841, 990
Alw21I GWGCWC 1 cut(s) 636
Alw26I GTCTC 4 cut(s) 267, 935, 1142, 1277
AlwI GGATC 2 cut(s) 891, 904
Ama87I CYCGRG 1 cut(s) 892
Aor13HI TCCGGA 1 cut(s) 28
AoxI GGCC 6 cut(s) 4, 199, 381, 488, 708, 1258
ApaI GGGCCC 1 cut(s) 385
ApeKI GCWGC 4 cut(s) 525, 581, 786, 864
ApoI RAATTY 3 cut(s) 761, 846, 1105
AspS9I GGNCC 5 cut(s) 4, 358, 381, 382, 1229
AsuHPI GGTGA 5 cut(s) 155, 896, 997, 1171, 1344
AvaI CYCGRG 1 cut(s) 892
AvaII GGWCC 2 cut(s) 358, 1229
BaeGI GKGCMC 1 cut(s) 385
BalI TGGCCA 2 cut(s) 710, 1260
BamHI GGATCC 1 cut(s) 896
BanII GRGCYC 2 cut(s) 87, 385
BauI CACGAG 1 cut(s) 629
BbrPI CACGTG 1 cut(s) 792
BbsI GAAGAC 3 cut(s) 57, 306, 1247
Bbv12I GWGCWC 1 cut(s) 636
BbvI GCAGC 4 cut(s) 537, 568, 798, 876
BccI CCATC 4 cut(s) 92, 362, 988, 1318
BceAI ACGGC 4 cut(s) 295, 662, 1072, 1195
BciT130I CCWGG 2 cut(s) 198, 811
BcoDI GTCTC 4 cut(s) 267, 935, 1142, 1277
BfmI CTRYAG 1 cut(s) 93
BisI GCNGC 4 cut(s) 526, 582, 787, 865
BlsI GCNGC 4 cut(s) 527, 583, 788, 866
BmcAI AGTACT 1 cut(s) 890
Bme1390I CCNGG 2 cut(s) 198, 811
Bme18I GGWCC 2 cut(s) 358, 1229
BmeT110I CYCGRG 1 cut(s) 892
BmgBI CACGTC 1 cut(s) 611
BmgT120I GGNCC 5 cut(s) 4, 358, 381, 382, 1229
BmiI GGNNCC 3 cut(s) 383, 898, 1009
BmrFI CCNGG 2 cut(s) 198, 811
BmsI GCATC 1 cut(s) 1197
BoxI GACNNNNGTC 1 cut(s) 306
BpiI GAAGAC 3 cut(s) 57, 306, 1247
BpuEI CTTGAG 1 cut(s) 622
BsaAI YACGTR 3 cut(s) 768, 792, 948
BsaBI GATNNNNATC 1 cut(s) 102
BsaI GGTCTC 2 cut(s) 935, 1277
BsaJI CCNNGG 4 cut(s) 251, 1002, 1215, 1225
BsaWI WCCGGW 1 cut(s) 28
BsaXI ACNNNNNCTCC 2 cut(s) 932, 962
Bsc4I CCNNNNNNNGG 3 cut(s) 333, 857, 906
Bse118I RCCGGY 2 cut(s) 490, 736
Bse1I ACTGG 5 cut(s) 149, 723, 904, 1102, 1232
Bse3DI GCAATG 1 cut(s) 1307
Bse8I GATNNNNATC 1 cut(s) 102
BseAI TCCGGA 1 cut(s) 28
BseBI CCWGG 2 cut(s) 198, 811
BseDI CCNNGG 4 cut(s) 251, 1002, 1215, 1225
BseGI GGATG 2 cut(s) 1048, 1087
BseJI GATNNNNATC 1 cut(s) 102
BseLI CCNNNNNNNGG 3 cut(s) 333, 857, 906
BseMI GCAATG 1 cut(s) 1307
BseNI ACTGG 5 cut(s) 149, 723, 904, 1102, 1232
BseRI GAGGAG 1 cut(s) 1295
BseSI GKGCMC 1 cut(s) 385
BseXI GCAGC 4 cut(s) 537, 568, 798, 876
BseYI CCCAGC 1 cut(s) 817
Bsh1236I CGCG 1 cut(s) 114
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 6 cut(s) 6, 201, 383, 490, 710, 1260
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 1 cut(s) 636
BsiHKCI CYCGRG 1 cut(s) 892
BsiSI CCGG 3 cut(s) 29, 491, 737
BslFI GGGAC 2 cut(s) 349, 1171
BslI CCNNNNNNNGG 3 cut(s) 333, 857, 906
BsmAI GTCTC 4 cut(s) 267, 935, 1142, 1277
BsmFI GGGAC 2 cut(s) 349, 1171
BsmI GAATGC 1 cut(s) 263
BsnI GGCC 6 cut(s) 6, 201, 383, 490, 710, 1260
Bso31I GGTCTC 2 cut(s) 935, 1277
BsoBI CYCGRG 1 cut(s) 892
Bsp120I GGGCCC 1 cut(s) 381
Bsp1286I GDGCHC 3 cut(s) 87, 385, 636
Bsp13I TCCGGA 1 cut(s) 28
Bsp1407I TGTACA 3 cut(s) 71, 1071, 1132
Bsp143I GATC 2 cut(s) 387, 896
BspACI CCGC 6 cut(s) 15, 112, 361, 523, 549, 1039
BspANI GGCC 6 cut(s) 6, 201, 383, 490, 710, 1260
BspEI TCCGGA 1 cut(s) 28
BspFNI CGCG 1 cut(s) 114
BspLI GGNNCC 3 cut(s) 383, 898, 1009
BspPI GGATC 2 cut(s) 891, 904
BspTNI GGTCTC 2 cut(s) 935, 1277
BsrDI GCAATG 1 cut(s) 1307
BsrFI RCCGGY 2 cut(s) 490, 736
BsrGI TGTACA 3 cut(s) 71, 1071, 1132
BsrI ACTGG 5 cut(s) 149, 723, 904, 1102, 1232
BssAI RCCGGY 2 cut(s) 490, 736
BssECI CCNNGG 4 cut(s) 251, 1002, 1215, 1225
BssMI GATC 2 cut(s) 387, 896
BssSI CACGAG 1 cut(s) 629
BssT1I CCWWGG 2 cut(s) 1002, 1225
Bst2BI CACGAG 1 cut(s) 629
Bst2UI CCWGG 2 cut(s) 198, 811
Bst4CI ACNGT 3 cut(s) 346, 1088, 1350
BstAUI TGTACA 3 cut(s) 71, 1071, 1132
BstBAI YACGTR 3 cut(s) 768, 792, 948
BstC8I GCNNGC 2 cut(s) 551, 966
BstEII GGTNACC 1 cut(s) 161
BstF5I GGATG 2 cut(s) 1048, 1087
BstFNI CGCG 1 cut(s) 114
BstKTI GATC 2 cut(s) 390, 899
BstMAI GTCTC 4 cut(s) 267, 935, 1142, 1277
BstMBI GATC 2 cut(s) 387, 896
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 2 cut(s) 12, 1045
BstNI CCWGG 2 cut(s) 198, 811
BstNSI RCATGY 1 cut(s) 260
BstPAI GACNNNNGTC 1 cut(s) 306
BstPI GGTNACC 1 cut(s) 161
BstSCI CCNGG 2 cut(s) 196, 809
BstSFI CTRYAG 1 cut(s) 93
BstSLI GKGCMC 1 cut(s) 385
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 4 cut(s) 537, 568, 798, 876
BstV2I GAAGAC 3 cut(s) 57, 306, 1247
BstX2I RGATCY 1 cut(s) 896
BstXI CCANNNNNNTGG 1 cut(s) 706
BstYI RGATCY 1 cut(s) 896
BsuRI GGCC 6 cut(s) 6, 201, 383, 490, 710, 1260
BtrI CACGTC 1 cut(s) 611
BtsCI GGATG 2 cut(s) 1048, 1087
BtsIMutI CAGTG 4 cut(s) 911, 1095, 1239, 1346
Cac8I GCNNGC 2 cut(s) 551, 966
Cfr10I RCCGGY 2 cut(s) 490, 736
Cfr13I GGNCC 5 cut(s) 4, 358, 381, 382, 1229
Csp6I GTAC 8 cut(s) 19, 72, 421, 769, 889, 949, 1072, 1133
CviAII CATG 9 cut(s) 69, 128, 214, 257, 295, 374, 700, 823, 1262
CviQI GTAC 8 cut(s) 19, 72, 421, 769, 889, 949, 1072, 1133
DpnI GATC 2 cut(s) 389, 898
DpnII GATC 2 cut(s) 387, 896
DrdI GACNNNNNNGTC 1 cut(s) 509
DseDI GACNNNNNNGTC 1 cut(s) 509
EaeI YGGCCR 3 cut(s) 488, 708, 1258
Eco130I CCWWGG 2 cut(s) 1002, 1225
Eco24I GRGCYC 2 cut(s) 87, 385
Eco31I GGTCTC 2 cut(s) 935, 1277
Eco32I GATATC 2 cut(s) 211, 220
Eco47I GGWCC 2 cut(s) 358, 1229
Eco72I CACGTG 1 cut(s) 792
Eco88I CYCGRG 1 cut(s) 892
Eco91I GGTNACC 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 381
EcoO65I GGTNACC 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 2 cut(s) 196, 809
EcoRV GATATC 2 cut(s) 211, 220
EcoT14I CCWWGG 2 cut(s) 1002, 1225
EcoT38I GRGCYC 2 cut(s) 87, 385
ErhI CCWWGG 2 cut(s) 1002, 1225
FaeI CATG 9 cut(s) 72, 131, 217, 260, 298, 377, 703, 826, 1265
FaqI GGGAC 2 cut(s) 349, 1171
FatI CATG 9 cut(s) 68, 127, 213, 256, 294, 373, 699, 822, 1261
FauI CCCGC 3 cut(s) 8, 542, 1032
Fnu4HI GCNGC 4 cut(s) 526, 582, 787, 865
FokI GGATG 2 cut(s) 1055, 1094
FriOI GRGCYC 2 cut(s) 87, 385
Fsp4HI GCNGC 4 cut(s) 526, 582, 787, 865
GluI GCNGC 4 cut(s) 526, 582, 787, 865
GsaI CCCAGC 1 cut(s) 821
HaeIII GGCC 6 cut(s) 6, 201, 383, 490, 710, 1260
HapII CCGG 3 cut(s) 29, 491, 737
Hin1II CATG 9 cut(s) 72, 131, 217, 260, 298, 377, 703, 826, 1265
HinfI GANTC 4 cut(s) 233, 605, 645, 833
HpaII CCGG 3 cut(s) 29, 491, 737
HphI GGTGA 5 cut(s) 155, 896, 997, 1171, 1344
Hpy166II GTNNAC 4 cut(s) 502, 742, 795, 1072
Hpy188I TCNGA 3 cut(s) 860, 928, 1216
Hpy188III TCNNGA 3 cut(s) 29, 107, 894
Hpy8I GTNNAC 4 cut(s) 502, 742, 795, 1072
Hpy99I CGWCG 1 cut(s) 473
HpyAV CCTTC 3 cut(s) 372, 595, 1072
HpyCH4III ACNGT 3 cut(s) 346, 1088, 1350
HpyCH4IV ACGT 5 cut(s) 610, 767, 791, 923, 947
HpyCH4V TGCA 2 cut(s) 341, 518
HpyF10VI GCNNNNNNNGC 2 cut(s) 12, 1045
HpySE526I ACGT 5 cut(s) 610, 767, 791, 923, 947
Hsp92II CATG 9 cut(s) 72, 131, 217, 260, 298, 377, 703, 826, 1265
Kpn2I TCCGGA 1 cut(s) 28
Kzo9I GATC 2 cut(s) 387, 896
Lsp1109I GCAGC 4 cut(s) 537, 568, 798, 876
LweI GCATC 1 cut(s) 1197
MaeII ACGT 5 cut(s) 610, 767, 791, 923, 947
MaeIII GTNAC 5 cut(s) 161, 606, 725, 871, 1350
MalI GATC 2 cut(s) 389, 898
MboI GATC 2 cut(s) 387, 896
MboII GAAGA 8 cut(s) 59, 62, 311, 635, 1205, 1249, 1252, 1333
MflI RGATCY 1 cut(s) 896
MhlI GDGCHC 3 cut(s) 87, 385, 636
MlsI TGGCCA 2 cut(s) 710, 1260
MluCI AATT 7 cut(s) 541, 658, 761, 846, 876, 918, 1105
MluNI TGGCCA 2 cut(s) 710, 1260
MlyI GAGTC 1 cut(s) 614
MnlI CCTC 7 cut(s) 25, 246, 349, 411, 854, 1210, 1273
Mox20I TGGCCA 2 cut(s) 710, 1260
MroI TCCGGA 1 cut(s) 28
MscI TGGCCA 2 cut(s) 710, 1260
MseI TTAA 2 cut(s) 534, 1357
MslI CAYNNNNRTG 4 cut(s) 704, 737, 983, 1100
Msp20I TGGCCA 2 cut(s) 710, 1260
MspA1I CMGCKG 1 cut(s) 1039
MspI CCGG 3 cut(s) 29, 491, 737
MspR9I CCNGG 2 cut(s) 198, 811
Mva1269I GAATGC 1 cut(s) 263
MvaI CCWGG 2 cut(s) 198, 811
MvnI CGCG 1 cut(s) 114
MwoI GCNNNNNNNGC 2 cut(s) 12, 1045
NdeII GATC 2 cut(s) 387, 896
NlaIII CATG 9 cut(s) 72, 131, 217, 260, 298, 377, 703, 826, 1265
NlaIV GGNNCC 3 cut(s) 383, 898, 1009
NmeAIII GCCGAG 1 cut(s) 276
NmuCI GTSAC 4 cut(s) 161, 606, 871, 1350
NspI RCATGY 1 cut(s) 260
OliI CACNNNNGTG 2 cut(s) 737, 1100
PcsI WCGNNNNNNNCGW 1 cut(s) 324
PctI GAATGC 1 cut(s) 263
PfeI GAWTC 3 cut(s) 233, 645, 833
PfoI TCCNGGA 1 cut(s) 809
PkrI GCNGC 4 cut(s) 527, 583, 788, 866
PleI GAGTC 1 cut(s) 613
PmaCI CACGTG 1 cut(s) 792
PmlI CACGTG 1 cut(s) 792
PpsI GAGTC 1 cut(s) 613
Ppu21I YACGTR 3 cut(s) 768, 792, 948
PshAI GACNNNNGTC 1 cut(s) 306
Psp6I CCWGG 2 cut(s) 196, 809
PspCI CACGTG 1 cut(s) 792
PspEI GGTNACC 1 cut(s) 161
PspFI CCCAGC 1 cut(s) 817
PspGI CCWGG 2 cut(s) 196, 809
PspN4I GGNNCC 3 cut(s) 383, 898, 1009
PspOMI GGGCCC 1 cut(s) 381
PspPI GGNCC 5 cut(s) 4, 358, 381, 382, 1229
PsuI RGATCY 1 cut(s) 896
RsaI GTAC 8 cut(s) 20, 73, 422, 770, 890, 950, 1073, 1134
RsaNI GTAC 8 cut(s) 19, 72, 421, 769, 889, 949, 1072, 1133
RseI CAYNNNNRTG 4 cut(s) 704, 737, 983, 1100
SaqAI TTAA 2 cut(s) 534, 1357
SatI GCNGC 4 cut(s) 526, 582, 787, 865
Sau3AI GATC 2 cut(s) 387, 896
Sau96I GGNCC 5 cut(s) 4, 358, 381, 382, 1229
ScaI AGTACT 1 cut(s) 890
SchI GAGTC 1 cut(s) 614
ScrFI CCNGG 2 cut(s) 198, 811
SduI GDGCHC 3 cut(s) 87, 385, 636
SfaNI GCATC 1 cut(s) 1197
SfcI CTRYAG 1 cut(s) 93
SgrAI CRCCGGYG 1 cut(s) 736
SinI GGWCC 2 cut(s) 358, 1229
SmiMI CAYNNNNRTG 4 cut(s) 704, 737, 983, 1100
SmlI CTYRAG 1 cut(s) 637
SmoI CTYRAG 1 cut(s) 637
Sse9I AATT 7 cut(s) 541, 658, 761, 846, 876, 918, 1105
SsiI CCGC 6 cut(s) 15, 112, 361, 523, 549, 1039
SspI AATATT 1 cut(s) 748
StyD4I CCNGG 2 cut(s) 196, 809
StyI CCWWGG 2 cut(s) 1002, 1225
TaaI ACNGT 3 cut(s) 346, 1088, 1350
TaiI ACGT 5 cut(s) 613, 770, 794, 926, 950
TaqI TCGA 2 cut(s) 59, 81
TasI AATT 7 cut(s) 541, 658, 761, 846, 876, 918, 1105
TatI WGTACW 4 cut(s) 71, 888, 1071, 1132
TfiI GAWTC 3 cut(s) 233, 645, 833
Tru1I TTAA 2 cut(s) 534, 1357
Tru9I TTAA 2 cut(s) 534, 1357
TscAI CASTG 4 cut(s) 911, 1102, 1239, 1353
TseFI GTSAC 4 cut(s) 161, 606, 871, 1350
TseI GCWGC 4 cut(s) 525, 581, 786, 864
Tsp45I GTSAC 4 cut(s) 161, 606, 871, 1350
TspDTI ATGAA 5 cut(s) 54, 161, 1140, 1179, 1350
TspRI CASTG 4 cut(s) 911, 1102, 1239, 1353
VpaK11BI GGWCC 2 cut(s) 358, 1229
XapI RAATTY 3 cut(s) 761, 846, 1105
XceI RCATGY 1 cut(s) 260
XcmI CCANNNNNNNNNTGG 1 cut(s) 434
ZrmI AGTACT 1 cut(s) 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.