Rorug02G0503900

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000217
Physical Location & Seq
Forward (+)
63568213 .. 63570381
2169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0503900.1

Sequence Viewer

Length: 1323 bp
ATGAAACGTGTTTTGCCTGTTGTTGATTCCATGGCTTATAGTAGTACTAGTAAGAAGCACCGTCTGAAAGACGATGCCTCTTTCCGGCGTTTCGTGCCACTTGTTTCGATTACATGTTTAGGAGTTTTCCTGCTGATCTTCCTGTTAAGAATGAATTCAAGTTCGAATTTTGTGGTACCGTTTTCGGATGAGTTTGATGAGGTGTTGTTAAGGAGTTACAATCGATCACTTATTAGCCGAAAACTTAACCTTCCAAAGCAGAATGAATTTTCAATTGAGTTGGAGAAGAGAAATCAGATGCCTCCTAGAAATTTAGATCTGTATCCGAGTCTAGCCAAGTATCATATAACTGTTGTTCTTTATGTACACAACCGGCCACAATATCTGAAAGTAGCTGTTGATAGTATATCTCAGGTTGTAGGAATCAATGAGACTTTACTGATAGTTAGCCATGATGGGTACTTTGAGGAAATGAATAAGATTGTTGAGGATATTAGGTTTTGCCAAGTCAAGCAGATATTTGCCCCTTTCTCACCACATGTCTTTCCCAGTGGCTTTCCGGGAGTGTCACCTGGGGATTGTAAGGATAAGGATGATGGTGCGGAGAAGCACTGTAAAGGGACTCCTGATCAGTATGGGAACCATCGGTCGCCAAAGATTGTGTCCTTGAAGCATCATTGGTGGTGGATGATGAACACGGTGTGGGATGGATTGAATGAGACTAGGAATCACAATGGTCATATTCTTTTCATAGAGGAAGACCACTTTCTGTATCCCAATGCCTATCAGAACTTGAAGATACTGACAGCACTGAAGCCTCAAAAATGCCCCCATTGCTATGCCGCTAATTTGGCACCTTGTGATGTGAATGCCAGGGGAGAAGGTTGGGATAGTTTGATTGCAGAGAGAATGGGGAATGTGGGCTATACATTTAACCGTACTGTTTGGAGGAAGATCCATAAGAAGACCAACAAATTCTGTTTCTTTGATGATTACAATTGGGATATAACAATGTGGGCAACGGTCTATCCCTCATTTGGTAATCCTGTTTTCACGTTACGAGGGCCTAGGACAAGCGCAGTGCACTTCGGAAAGTGTGGTTTGCACCAGGGCCAGGAGGGTGAGAAAGCATGCATTGATAATGGCGTGGTGAACTTTCAAGTGGAGGATGTAGACAAGGTTGCAAACATCAATTCAGACTGGGAAGTGCGAGTCTTTGAGAATCAGCCCGGGTATAAAGCTGGGTTCAAGGGTTGGGGAGGCTGGGGGGACAAGCGAGACCATCAGTTGTGCTTGAATTTTGCTCAGATGTATCATTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

440

Amino Acids

50.72

Weight (kDa)

8.5

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGAT2 PF05060 100 - 431 1.9e-100 N-acetylglucosaminyltransferase II (MGAT2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 175
AccB1I GGYRCC 2 cut(s) 175, 853
AccI GTMKAC 1 cut(s) 1173
AciI CCGC 2 cut(s) 602, 843
AclWI GGATC 1 cut(s) 949
AcoI YGGCCR 1 cut(s) 374
AcsI RAATTY 6 cut(s) 154, 166, 266, 310, 974, 1297
AcuI CTGAAG 1 cut(s) 833
AdeI CACNNNGTG 2 cut(s) 702, 860
AfaI GTAC 5 cut(s) 46, 177, 366, 461, 940
AfiI CCNNNNNNNGG 3 cut(s) 84, 1037, 1114
AflIII ACRYGT 3 cut(s) 7, 113, 538
AgsI TTSAA 8 cut(s) 159, 273, 670, 715, 796, 1160, 1249, 1297
AhlI ACTAGT 1 cut(s) 47
AjnI CCWGG 4 cut(s) 571, 872, 1107, 1113
AluBI AGCT 2 cut(s) 395, 1241
AluI AGCT 2 cut(s) 395, 1241
Alw21I GWGCWC 1 cut(s) 1086
Alw26I GTCTC 3 cut(s) 425, 713, 1272
Alw44I GTGCAC 1 cut(s) 1082
AlwI GGATC 1 cut(s) 949
Ama87I CYCGRG 1 cut(s) 1229
AoxI GGCC 3 cut(s) 374, 1064, 1111
ApaLI GTGCAC 1 cut(s) 1082
ApoI RAATTY 6 cut(s) 154, 166, 266, 310, 974, 1297
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
Asp700I GAANNNNTTC 1 cut(s) 154
Asp718I GGTACC 1 cut(s) 175
AspA2I CCTAGG 1 cut(s) 1067
AspLEI GCGC 1 cut(s) 1079
AspS9I GGNCC 2 cut(s) 1064, 1111
AsuC2I CCSGG 3 cut(s) 561, 1230, 1231
AsuHPI GGTGA 4 cut(s) 525, 561, 1133, 1162
AsuII TTCGAA 1 cut(s) 164
AvaI CYCGRG 1 cut(s) 1229
AvrII CCTAGG 1 cut(s) 1067
BaeGI GKGCMC 1 cut(s) 1086
BanI GGYRCC 2 cut(s) 175, 853
BbsI GAAGAC 2 cut(s) 765, 971
Bbv12I GWGCWC 1 cut(s) 1086
BccI CCATC 5 cut(s) 449, 590, 651, 701, 1290
BciT130I CCWGG 4 cut(s) 573, 874, 1109, 1115
BciVI GTATCC 2 cut(s) 333, 783
BclI TGATCA 1 cut(s) 628
BcnI CCSGG 3 cut(s) 561, 1230, 1231
BcoDI GTCTC 3 cut(s) 425, 713, 1272
BcuI ACTAGT 1 cut(s) 47
BfaI CTAG 5 cut(s) 48, 306, 332, 723, 1068
BfuI GTATCC 2 cut(s) 333, 783
BglII AGATCT 1 cut(s) 316
BisI GCNGC 1 cut(s) 843
BlnI CCTAGG 1 cut(s) 1067
BlsI GCNGC 1 cut(s) 844
BmcAI AGTACT 1 cut(s) 46
Bme1390I CCNGG 7 cut(s) 561, 573, 874, 1109, 1115, 1230, 1231
BmeT110I CYCGRG 1 cut(s) 1229
BmgT120I GGNCC 2 cut(s) 1064, 1111
BmiI GGNNCC 3 cut(s) 177, 641, 855
BmrFI CCNGG 7 cut(s) 561, 573, 874, 1109, 1115, 1230, 1231
BmrI ACTGGG 2 cut(s) 543, 1210
BmsI GCATC 3 cut(s) 64, 288, 682
BmuI ACTGGG 2 cut(s) 543, 1210
BpiI GAAGAC 2 cut(s) 765, 971
Bpu14I TTCGAA 1 cut(s) 164
BpuMI CCSGG 3 cut(s) 561, 1230, 1231
Bsa29I ATCGAT 1 cut(s) 223
BsaBI GATNNNNATC 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 1272
BsaJI CCNNGG 6 cut(s) 30, 572, 873, 1067, 1108, 1229
Bsc4I CCNNNNNNNGG 3 cut(s) 84, 1037, 1114
Bse118I RCCGGY 1 cut(s) 372
Bse1I ACTGG 2 cut(s) 549, 1205
Bse3DI GCAATG 1 cut(s) 832
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 4 cut(s) 573, 874, 1109, 1115
BseCI ATCGAT 1 cut(s) 223
BseDI CCNNGG 6 cut(s) 30, 572, 873, 1067, 1108, 1229
BseGI GGATG 5 cut(s) 193, 598, 693, 712, 1174
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 3 cut(s) 84, 1037, 1114
BseMI GCAATG 1 cut(s) 832
BseMII CTCAG 2 cut(s) 425, 1319
BseNI ACTGG 2 cut(s) 549, 1205
BseSI GKGCMC 1 cut(s) 1086
BseYI CCCAGC 2 cut(s) 1241, 1263
Bsh1285I CGRYCG 1 cut(s) 650
BshFI GGCC 3 cut(s) 376, 1066, 1113
BshNI GGYRCC 2 cut(s) 175, 853
BshVI ATCGAT 1 cut(s) 223
BsiEI CGRYCG 1 cut(s) 650
BsiHKAI GWGCWC 1 cut(s) 1086
BsiHKCI CYCGRG 1 cut(s) 1229
BsiSI CCGG 4 cut(s) 85, 373, 560, 1230
BslFI GGGAC 2 cut(s) 634, 1283
BslI CCNNNNNNNGG 3 cut(s) 84, 1037, 1114
BsmAI GTCTC 3 cut(s) 425, 713, 1272
BsmFI GGGAC 2 cut(s) 634, 1283
BsmI GAATGC 1 cut(s) 874
BsnI GGCC 3 cut(s) 376, 1066, 1113
Bso31I GGTCTC 1 cut(s) 1272
BsoBI CYCGRG 1 cut(s) 1229
Bsp119I TTCGAA 1 cut(s) 164
Bsp1286I GDGCHC 1 cut(s) 1086
Bsp1407I TGTACA 1 cut(s) 364
Bsp143I GATC 5 cut(s) 135, 224, 316, 628, 954
Bsp19I CCATGG 1 cut(s) 30
BspACI CCGC 2 cut(s) 602, 843
BspANI GGCC 3 cut(s) 376, 1066, 1113
BspCNI CTCAG 2 cut(s) 424, 1318
BspDI ATCGAT 1 cut(s) 223
BspLI GGNNCC 3 cut(s) 177, 641, 855
BspPI GGATC 1 cut(s) 949
BspT104I TTCGAA 1 cut(s) 164
BspT107I GGYRCC 2 cut(s) 175, 853
BspTNI GGTCTC 1 cut(s) 1272
BsrDI GCAATG 1 cut(s) 832
BsrFI RCCGGY 1 cut(s) 372
BsrGI TGTACA 1 cut(s) 364
BsrI ACTGG 2 cut(s) 549, 1205
BssAI RCCGGY 1 cut(s) 372
BssECI CCNNGG 6 cut(s) 30, 572, 873, 1067, 1108, 1229
BssMI GATC 5 cut(s) 135, 224, 316, 628, 954
BssT1I CCWWGG 2 cut(s) 30, 1067
Bst2UI CCWGG 4 cut(s) 573, 874, 1109, 1115
Bst4CI ACNGT 8 cut(s) 62, 180, 352, 614, 700, 938, 943, 1024
Bst6I CTCTTC 1 cut(s) 281
BstAUI TGTACA 1 cut(s) 364
BstBI TTCGAA 1 cut(s) 164
BstC8I GCNNGC 1 cut(s) 1132
BstDEI CTNAG 2 cut(s) 411, 1305
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 5 cut(s) 193, 598, 693, 712, 1174
BstHHI GCGC 1 cut(s) 1079
BstKTI GATC 5 cut(s) 138, 227, 319, 631, 957
BstMAI GTCTC 3 cut(s) 425, 713, 1272
BstMBI GATC 5 cut(s) 135, 224, 316, 628, 954
BstMCI CGRYCG 1 cut(s) 650
BstMWI GCNNNNNNNGC 3 cut(s) 94, 834, 851
BstNI CCWGG 4 cut(s) 573, 874, 1109, 1115
BstNSI RCATGY 3 cut(s) 117, 542, 1134
BstSCI CCNGG 7 cut(s) 559, 571, 872, 1107, 1113, 1228, 1229
BstSLI GKGCMC 1 cut(s) 1086
BstV2I GAAGAC 2 cut(s) 765, 971
BstX2I RGATCY 2 cut(s) 316, 954
BstYI RGATCY 2 cut(s) 316, 954
Bsu15I ATCGAT 1 cut(s) 223
BsuI GTATCC 2 cut(s) 333, 783
BsuRI GGCC 3 cut(s) 376, 1066, 1113
BsuTUI ATCGAT 1 cut(s) 223
BtgI CCRYGG 1 cut(s) 30
BtsCI GGATG 5 cut(s) 193, 598, 693, 712, 1174
BtsI GCAGTG 1 cut(s) 1086
BtsIMutI CAGTG 4 cut(s) 556, 610, 809, 1086
Cac8I GCNNGC 1 cut(s) 1132
CfoI GCGC 1 cut(s) 1079
Cfr10I RCCGGY 1 cut(s) 372
Cfr13I GGNCC 2 cut(s) 1064, 1111
Cfr9I CCCGGG 1 cut(s) 1229
ClaI ATCGAT 1 cut(s) 223
Csp6I GTAC 5 cut(s) 45, 176, 365, 460, 939
CviAII CATG 5 cut(s) 31, 114, 452, 539, 1131
CviQI GTAC 5 cut(s) 45, 176, 365, 460, 939
DdeI CTNAG 2 cut(s) 411, 1305
DpnI GATC 5 cut(s) 137, 226, 318, 630, 956
DpnII GATC 5 cut(s) 135, 224, 316, 628, 954
DraIII CACNNNGTG 2 cut(s) 702, 860
EaeI YGGCCR 1 cut(s) 374
Eam1104I CTCTTC 1 cut(s) 281
EarI CTCTTC 1 cut(s) 281
Eco130I CCWWGG 2 cut(s) 30, 1067
Eco31I GGTCTC 1 cut(s) 1272
Eco57I CTGAAG 1 cut(s) 833
Eco88I CYCGRG 1 cut(s) 1229
EcoO109I RGGNCCY 1 cut(s) 1064
EcoRI GAATTC 1 cut(s) 154
EcoRII CCWGG 4 cut(s) 571, 872, 1107, 1113
EcoT14I CCWWGG 2 cut(s) 30, 1067
EcoT22I ATGCAT 1 cut(s) 1136
ErhI CCWWGG 2 cut(s) 30, 1067
FaeI CATG 5 cut(s) 34, 117, 455, 542, 1134
FaqI GGGAC 2 cut(s) 634, 1283
FatI CATG 5 cut(s) 30, 113, 451, 538, 1130
FbaI TGATCA 1 cut(s) 628
FblI GTMKAC 1 cut(s) 1173
Fnu4HI GCNGC 1 cut(s) 843
FokI GGATG 5 cut(s) 200, 605, 700, 719, 1181
Fsp4HI GCNGC 1 cut(s) 843
FspBI CTAG 5 cut(s) 48, 306, 332, 723, 1068
GlaI GCGC 1 cut(s) 1078
GluI GCNGC 1 cut(s) 843
GsaI CCCAGC 2 cut(s) 1245, 1267
HaeIII GGCC 3 cut(s) 376, 1066, 1113
HapII CCGG 4 cut(s) 85, 373, 560, 1230
HhaI GCGC 1 cut(s) 1079
Hin1II CATG 5 cut(s) 34, 117, 455, 542, 1134
Hin6I GCGC 1 cut(s) 1077
HinP1I GCGC 1 cut(s) 1077
HinfI GANTC 7 cut(s) 26, 328, 423, 622, 727, 1212, 1222
HpaII CCGG 4 cut(s) 85, 373, 560, 1230
HphI GGTGA 4 cut(s) 525, 561, 1133, 1162
Hpy166II GTNNAC 4 cut(s) 367, 1084, 1153, 1174
Hpy188I TCNGA 9 cut(s) 66, 187, 297, 327, 387, 789, 1091, 1198, 1308
Hpy188III TCNNGA 1 cut(s) 626
Hpy8I GTNNAC 4 cut(s) 367, 1084, 1153, 1174
HpyAV CCTTC 2 cut(s) 260, 875
HpyCH4III ACNGT 8 cut(s) 62, 180, 352, 614, 700, 938, 943, 1024
HpyCH4IV ACGT 2 cut(s) 7, 1055
HpyCH4V TGCA 5 cut(s) 902, 1084, 1105, 1134, 1184
HpyF10VI GCNNNNNNNGC 3 cut(s) 94, 834, 851
HpyF3I CTNAG 2 cut(s) 411, 1305
HpySE526I ACGT 2 cut(s) 7, 1055
Hsp92II CATG 5 cut(s) 34, 117, 455, 542, 1134
HspAI GCGC 1 cut(s) 1077
KpnI GGTACC 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 628
Kzo9I GATC 5 cut(s) 135, 224, 316, 628, 954
LweI GCATC 3 cut(s) 64, 288, 682
MaeI CTAG 5 cut(s) 48, 306, 332, 723, 1068
MaeII ACGT 2 cut(s) 7, 1055
MaeIII GTNAC 3 cut(s) 215, 567, 1056
MalI GATC 5 cut(s) 137, 226, 318, 630, 956
MboI GATC 5 cut(s) 135, 224, 316, 628, 954
MboII GAAGA 6 cut(s) 130, 298, 770, 808, 964, 976
MfeI CAATTG 2 cut(s) 273, 997
MflI RGATCY 2 cut(s) 316, 954
MhlI GDGCHC 1 cut(s) 1086
MlyI GAGTC 3 cut(s) 337, 616, 1221
MmeI TCCRAC 1 cut(s) 261
Mph1103I ATGCAT 1 cut(s) 1136
MroXI GAANNNNTTC 1 cut(s) 154
MseI TTAA 4 cut(s) 146, 209, 246, 933
MslI CAYNNNNRTG 1 cut(s) 837
MspI CCGG 4 cut(s) 85, 373, 560, 1230
MspR9I CCNGG 7 cut(s) 561, 573, 874, 1109, 1115, 1230, 1231
MunI CAATTG 2 cut(s) 273, 997
Mva1269I GAATGC 1 cut(s) 874
MvaI CCWGG 4 cut(s) 573, 874, 1109, 1115
MwoI GCNNNNNNNGC 3 cut(s) 94, 834, 851
NciI CCSGG 3 cut(s) 561, 1230, 1231
NcoI CCATGG 1 cut(s) 30
NdeII GATC 5 cut(s) 135, 224, 316, 628, 954
NlaIII CATG 5 cut(s) 34, 117, 455, 542, 1134
NlaIV GGNNCC 3 cut(s) 177, 641, 855
NmuCI GTSAC 1 cut(s) 567
NsiI ATGCAT 1 cut(s) 1136
NspI RCATGY 3 cut(s) 117, 542, 1134
NspV TTCGAA 1 cut(s) 164
PaeI GCATGC 1 cut(s) 1134
PciI ACATGT 2 cut(s) 113, 538
PctI GAATGC 1 cut(s) 874
PdmI GAANNNNTTC 1 cut(s) 154
PfeI GAWTC 4 cut(s) 26, 423, 727, 1222
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 1 cut(s) 844
PleI GAGTC 3 cut(s) 336, 616, 1220
PpsI GAGTC 3 cut(s) 336, 616, 1220
PscI ACATGT 2 cut(s) 113, 538
Psp6I CCWGG 4 cut(s) 571, 872, 1107, 1113
PspFI CCCAGC 2 cut(s) 1241, 1263
PspGI CCWGG 4 cut(s) 571, 872, 1107, 1113
PspN4I GGNNCC 3 cut(s) 177, 641, 855
PspPI GGNCC 2 cut(s) 1064, 1111
PsuI RGATCY 2 cut(s) 316, 954
RsaI GTAC 5 cut(s) 46, 177, 366, 461, 940
RsaNI GTAC 5 cut(s) 45, 176, 365, 460, 939
RseI CAYNNNNRTG 1 cut(s) 837
SaqAI TTAA 4 cut(s) 146, 209, 246, 933
SatI GCNGC 1 cut(s) 843
Sau3AI GATC 5 cut(s) 135, 224, 316, 628, 954
Sau96I GGNCC 2 cut(s) 1064, 1111
ScaI AGTACT 1 cut(s) 46
SchI GAGTC 3 cut(s) 337, 616, 1221
ScrFI CCNGG 7 cut(s) 561, 573, 874, 1109, 1115, 1230, 1231
SduI GDGCHC 1 cut(s) 1086
SfaNI GCATC 3 cut(s) 64, 288, 682
SfuI TTCGAA 1 cut(s) 164
SmaI CCCGGG 1 cut(s) 1231
SmiMI CAYNNNNRTG 1 cut(s) 837
SpeI ACTAGT 1 cut(s) 47
SphI GCATGC 1 cut(s) 1134
SsiI CCGC 2 cut(s) 602, 843
SspMI CTAG 5 cut(s) 48, 306, 332, 723, 1068
StyD4I CCNGG 7 cut(s) 559, 571, 872, 1107, 1113, 1228, 1229
StyI CCWWGG 2 cut(s) 30, 1067
TaaI ACNGT 8 cut(s) 62, 180, 352, 614, 700, 938, 943, 1024
TaiI ACGT 2 cut(s) 10, 1058
TaqI TCGA 3 cut(s) 107, 164, 223
TaqII GACCGA 1 cut(s) 636
TatI WGTACW 2 cut(s) 44, 364
TauI GCSGC 1 cut(s) 845
TfiI GAWTC 4 cut(s) 26, 423, 727, 1222
Tru1I TTAA 4 cut(s) 146, 209, 246, 933
Tru9I TTAA 4 cut(s) 146, 209, 246, 933
TscAI CASTG 4 cut(s) 556, 617, 816, 1086
TseFI GTSAC 1 cut(s) 567
Tsp45I GTSAC 1 cut(s) 567
TspDTI ATGAA 6 cut(s) 17, 167, 279, 488, 707, 739
TspMI CCCGGG 1 cut(s) 1229
TspRI CASTG 4 cut(s) 556, 617, 816, 1086
VneI GTGCAC 1 cut(s) 1082
XapI RAATTY 6 cut(s) 154, 166, 266, 310, 974, 1297
XceI RCATGY 3 cut(s) 117, 542, 1134
XmaI CCCGGG 1 cut(s) 1229
XmaJI CCTAGG 1 cut(s) 1067
XmiI GTMKAC 1 cut(s) 1173
XmnI GAANNNNTTC 1 cut(s) 154
XspI CTAG 5 cut(s) 48, 306, 332, 723, 1068
ZrmI AGTACT 1 cut(s) 46
Zsp2I ATGCAT 1 cut(s) 1136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.