pycom14g20120

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0000217
Physical Location & Seq
Reverse (-)
21233914 .. 21235401
1488 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g20120.1

Sequence Viewer

Length: 1488 bp
ATGGCATCACAATTGCCAAGCACTCTTGCCCTGAAATCAAACAGTAACAACAAATACTTGCGCTACATACACGAAGGTGACTTCCATGGGTTTCTCCAATTCTCCGGAGACGATGTTGTGAGCCCATACACAAAATTGCACGTGGAGCCGACCTCAAATGGTGGCAACAACGGCGGCCTAGGGCTTGTGAATATAAGATTCGCTTACAACAACAAATACTTGAGAAGACAAGACAAAGACCACTGGTGGATTGTAGCCGGGGCTGATGAACCAGTGGAAGATAAATCCCTTTGGTCATGCACACTCTGGGAGCCTCAGGTTGTCGGAGTAGACAGCAACAACAGCAACAAAGTCCTCCTCCGACTGCGCCACGTGCAACTGGGACACTACGCAAGGCCACTCTCGGCAAATGCCTTCCATTCGTGCCTGTTCGCATCCCAAAATAATCCCGACACTCAAACCTATGAGGATGTCTTTTCAGTCACCGACTGGGAATCCTTGGTGATTTTCCCCAAACTTGTTGCCTTCAAAGGCGACAATGACCAATACCTCACCCCCAAATCCATCGATGGACACCCCCATCTGCAGTTCTCAGCCTCTGGTCTCATTGATACGTCGGTGGGGCACGAGGTCTTCACCGCAGGTGATGGAAGCGTTCGCATAAAGTCCACTCACACTCAAAATTTCTGGAGGCGTAGTAGCACTAAAGATTGGATCTGGACCGACACAAACGACGCCACCAACAAGGACTCTGACATGCTGTTTTGGCCAGTCAAACTCGAGGCTGCCGACCACAACAATACTGACAATATTAATGTTGTAGCTCTCCGCAACTTGGGCAACAACAACTACAGCAAGAGATTCACTACCGGGTCCAAGATTAGTTGTCTCTGTGCGAACGTGCCTACAATTACCGTAGAGGCGCACCTTGCAGTTGAAGAGCCTGTTCTGTCCAGAAAAATCTCTGATATCGGTTTCCGTCTCACCGATGCTAGGATCTATGATAAAAGCGAGATCGTCGTGGCCACTGGAATAGCCGAAAACCGCACCAAAGAACCCACATATGCAATCATCCCGCTGGTCTACATGGACACTAGGGCTAGTACTTGGAATTCCATTGTCGATCACGTCTCATTCACGTCCCTCATCCCAACCACCATAACTTCCGCCACTCTATTCATCGTAGACGAAAAGGACAACGTTAAAGTAGTGGGTGATCAGTTTACTGGAGTCTATGAGTGGGGAAAAGCTCGCACATCACAAACTACAATTGTGACTGAATTTCCGGTTGTTGTGAAGCCAATGACTCGGGTGAAGGTGAGCCTGATAGCAACAAAGGGTTCATGCGATGTTCCCTTCTTCTACTCTCAGAAAGACACTCTTATTAGCACTGAGAAGAAAATCGTTACCTACTCCAAGGAGGGTGGCGTTTATACGGGTGTCTGTTTCTACAACTTGAAGCACAAGGAAGAAGAAGAACCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

496

Amino Acids

55.49

Weight (kDa)

6.12

Isoelectric Point (pI)

34.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 4 - 162 2.9e-28 Agglutinin domain
Agglutinin PF07468 171 - 305 2.3e-20 Agglutinin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 632
Acc36I ACCTGC 1 cut(s) 632
AccI GTMKAC 3 cut(s) 330, 1083, 1185
AccIII TCCGGA 1 cut(s) 104
AciI CCGC 6 cut(s) 174, 639, 829, 1045, 1076, 1167
AclI AACGTT 1 cut(s) 1200
AclWI GGATC 2 cut(s) 722, 1004
AcoI YGGCCR 2 cut(s) 767, 1023
AcsI RAATTY 3 cut(s) 682, 1111, 1280
AcvI CACGTG 2 cut(s) 142, 373
AcyI GRCGYC 1 cut(s) 735
AfaI GTAC 1 cut(s) 1105
AfiI CCNNNNNNNGG 2 cut(s) 835, 993
AgsI TTSAA 3 cut(s) 529, 938, 1459
AjiI CACGTC 2 cut(s) 1129, 1140
AleI CACNNNNGTG 1 cut(s) 75
AluBI AGCT 2 cut(s) 824, 1250
AluI AGCT 2 cut(s) 824, 1250
Alw26I GTCTC 5 cut(s) 102, 608, 893, 986, 1135
AlwI GGATC 2 cut(s) 722, 1004
AlwNI CAGNNNCTG 1 cut(s) 599
Ama87I CYCGRG 2 cut(s) 779, 1308
Aor13HI TCCGGA 1 cut(s) 104
AoxI GGCC 4 cut(s) 175, 395, 767, 1023
ApeKI GCWGC 1 cut(s) 785
ApoI RAATTY 3 cut(s) 682, 1111, 1280
AseI ATTAAT 1 cut(s) 813
AspA2I CCTAGG 1 cut(s) 178
AspLEI GCGC 3 cut(s) 63, 369, 925
AspS9I GGNCC 2 cut(s) 720, 873
AsuC2I CCSGG 2 cut(s) 259, 871
AvaI CYCGRG 2 cut(s) 779, 1308
AvaII GGWCC 2 cut(s) 720, 873
AvrII CCTAGG 1 cut(s) 178
AxyI CCTNAGG 1 cut(s) 315
BaeGI GKGCMC 1 cut(s) 627
BaeI ACNNNNGTAYC 2 cut(s) 603, 636
BalI TGGCCA 2 cut(s) 769, 1025
BanII GRGCYC 1 cut(s) 125
BauI CACGAG 1 cut(s) 626
BbrPI CACGTG 2 cut(s) 142, 373
BbsI GAAGAC 2 cut(s) 232, 625
BbvI GCAGC 1 cut(s) 772
BccI CCATC 4 cut(s) 563, 572, 588, 641
BceAI ACGGC 1 cut(s) 187
BclI TGATCA 1 cut(s) 1216
BcnI CCSGG 2 cut(s) 259, 871
BcoDI GTCTC 5 cut(s) 102, 608, 893, 986, 1135
BfaI CTAG 4 cut(s) 179, 993, 1095, 1101
BfmI CTRYAG 2 cut(s) 584, 850
BfuAI ACCTGC 1 cut(s) 632
BisI GCNGC 2 cut(s) 175, 786
BlnI CCTAGG 1 cut(s) 178
BlsI GCNGC 2 cut(s) 176, 787
BmcAI AGTACT 1 cut(s) 1105
Bme1390I CCNGG 2 cut(s) 259, 871
Bme18I GGWCC 2 cut(s) 720, 873
BmeT110I CYCGRG 2 cut(s) 779, 1308
BmgBI CACGTC 2 cut(s) 1129, 1140
BmgT120I GGNCC 2 cut(s) 720, 873
BmiI GGNNCC 3 cut(s) 147, 312, 874
BmrFI CCNGG 2 cut(s) 259, 871
BmrI ACTGGG 2 cut(s) 389, 499
BmsI GCATC 3 cut(s) 14, 443, 979
BmuI ACTGGG 2 cut(s) 389, 499
BpiI GAAGAC 2 cut(s) 232, 625
BplI GAGNNNNNCTC 2 cut(s) 137, 169
BpmI CTGGAG 2 cut(s) 709, 1248
BpuEI CTTGAG 1 cut(s) 241
BpuMI CCSGG 2 cut(s) 259, 871
Bsa29I ATCGAT 1 cut(s) 567
BsaAI YACGTR 2 cut(s) 142, 373
BsaHI GRCGYC 1 cut(s) 735
BsaI GGTCTC 1 cut(s) 608
BsaJI CCNNGG 5 cut(s) 85, 178, 258, 498, 1416
BsaWI WCCGGW 2 cut(s) 104, 1285
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 682, 712
Bsc4I CCNNNNNNNGG 2 cut(s) 835, 993
Bse1I ACTGG 7 cut(s) 248, 272, 384, 494, 770, 1033, 1231
Bse21I CCTNAGG 1 cut(s) 315
BseAI TCCGGA 1 cut(s) 104
BseCI ATCGAT 1 cut(s) 567
BseDI CCNNGG 5 cut(s) 85, 178, 258, 498, 1416
BseGI GGATG 4 cut(s) 434, 475, 1071, 1146
BseLI CCNNNNNNNGG 2 cut(s) 835, 993
BseMII CTCAG 4 cut(s) 329, 606, 1382, 1383
BseNI ACTGG 7 cut(s) 248, 272, 384, 494, 770, 1033, 1231
BseRI GAGGAG 1 cut(s) 347
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 1 cut(s) 772
BshFI GGCC 4 cut(s) 177, 397, 769, 1025
BshVI ATCGAT 1 cut(s) 567
BsiHKCI CYCGRG 2 cut(s) 779, 1308
BsiSI CCGG 4 cut(s) 105, 258, 870, 1286
BslFI GGGAC 2 cut(s) 396, 1126
BslI CCNNNNNNNGG 2 cut(s) 835, 993
BsmAI GTCTC 5 cut(s) 102, 608, 893, 986, 1135
BsmBI CGTCTC 3 cut(s) 102, 986, 1135
BsmFI GGGAC 2 cut(s) 396, 1126
BsnI GGCC 4 cut(s) 177, 397, 769, 1025
Bso31I GGTCTC 1 cut(s) 608
BsoBI CYCGRG 2 cut(s) 779, 1308
Bsp1286I GDGCHC 2 cut(s) 125, 627
Bsp13I TCCGGA 1 cut(s) 104
Bsp143I GATC 5 cut(s) 714, 996, 1014, 1123, 1216
Bsp19I CCATGG 1 cut(s) 85
BspACI CCGC 6 cut(s) 174, 639, 829, 1045, 1076, 1167
BspANI GGCC 4 cut(s) 177, 397, 769, 1025
BspCNI CTCAG 4 cut(s) 328, 605, 1381, 1384
BspDI ATCGAT 1 cut(s) 567
BspEI TCCGGA 1 cut(s) 104
BspLI GGNNCC 3 cut(s) 147, 312, 874
BspMAI CTGCAG 1 cut(s) 588
BspMI ACCTGC 1 cut(s) 632
BspPI GGATC 2 cut(s) 722, 1004
BspQI GCTCTTC 1 cut(s) 933
BspTNI GGTCTC 1 cut(s) 608
BsrI ACTGG 7 cut(s) 248, 272, 384, 494, 770, 1033, 1231
BssECI CCNNGG 5 cut(s) 85, 178, 258, 498, 1416
BssMI GATC 5 cut(s) 714, 996, 1014, 1123, 1216
BssNI GRCGYC 1 cut(s) 735
BssSI CACGAG 1 cut(s) 626
BssT1I CCWWGG 4 cut(s) 85, 178, 498, 1416
Bst2BI CACGAG 1 cut(s) 626
Bst4CI ACNGT 3 cut(s) 44, 916, 1485
Bst6I CTCTTC 1 cut(s) 933
BstACI GRCGYC 1 cut(s) 735
BstBAI YACGTR 2 cut(s) 142, 373
BstC8I GCNNGC 1 cut(s) 1252
BstDEI CTNAG 4 cut(s) 315, 592, 1368, 1392
BstDSI CCRYGG 1 cut(s) 85
BstF5I GGATG 4 cut(s) 434, 475, 1071, 1146
BstHHI GCGC 3 cut(s) 63, 369, 925
BstKTI GATC 5 cut(s) 717, 999, 1017, 1126, 1219
BstMAI GTCTC 5 cut(s) 102, 608, 893, 986, 1135
BstMBI GATC 5 cut(s) 714, 996, 1014, 1123, 1216
BstMWI GCNNNNNNNGC 7 cut(s) 145, 171, 342, 373, 766, 837, 929
BstNSI RCATGY 1 cut(s) 760
BstSCI CCNGG 2 cut(s) 257, 869
BstSFI CTRYAG 2 cut(s) 584, 850
BstSLI GKGCMC 1 cut(s) 627
BstV1I GCAGC 1 cut(s) 772
BstV2I GAAGAC 2 cut(s) 232, 625
BstX2I RGATCY 2 cut(s) 714, 996
BstYI RGATCY 2 cut(s) 714, 996
Bsu15I ATCGAT 1 cut(s) 567
Bsu36I CCTNAGG 1 cut(s) 315
BsuRI GGCC 4 cut(s) 177, 397, 769, 1025
BsuTUI ATCGAT 1 cut(s) 567
BtgI CCRYGG 1 cut(s) 85
BtgZI GCGATG 1 cut(s) 1362
BtrI CACGTC 2 cut(s) 1129, 1140
BtsCI GGATG 4 cut(s) 434, 475, 1071, 1146
BtsIMutI CAGTG 5 cut(s) 241, 279, 1026, 1389, 1481
BveI ACCTGC 1 cut(s) 632
Cac8I GCNNGC 1 cut(s) 1252
CaiI CAGNNNCTG 1 cut(s) 599
CfoI GCGC 3 cut(s) 63, 369, 925
Cfr13I GGNCC 2 cut(s) 720, 873
ClaI ATCGAT 1 cut(s) 567
CseI GACGC 1 cut(s) 743
Csp6I GTAC 1 cut(s) 1104
CspCI CAANNNNNGTGG 2 cut(s) 1405, 1440
CviAII CATG 5 cut(s) 86, 297, 757, 1087, 1344
CviQI GTAC 1 cut(s) 1104
DdeI CTNAG 4 cut(s) 315, 592, 1368, 1392
DpnI GATC 5 cut(s) 716, 998, 1016, 1125, 1218
DpnII GATC 5 cut(s) 714, 996, 1014, 1123, 1216
EaeI YGGCCR 2 cut(s) 767, 1023
Eam1104I CTCTTC 1 cut(s) 933
EarI CTCTTC 1 cut(s) 933
EciI GGCGGA 1 cut(s) 1156
Eco130I CCWWGG 4 cut(s) 85, 178, 498, 1416
Eco24I GRGCYC 1 cut(s) 125
Eco31I GGTCTC 1 cut(s) 608
Eco32I GATATC 1 cut(s) 970
Eco47I GGWCC 2 cut(s) 720, 873
Eco72I CACGTG 2 cut(s) 142, 373
Eco81I CCTNAGG 1 cut(s) 315
Eco88I CYCGRG 2 cut(s) 779, 1308
EcoRI GAATTC 1 cut(s) 1111
EcoRV GATATC 1 cut(s) 970
EcoT14I CCWWGG 4 cut(s) 85, 178, 498, 1416
EcoT38I GRGCYC 1 cut(s) 125
ErhI CCWWGG 4 cut(s) 85, 178, 498, 1416
Esp3I CGTCTC 3 cut(s) 102, 986, 1135
FaeI CATG 5 cut(s) 89, 300, 760, 1090, 1347
FalI AAGNNNNNCTT 4 cut(s) 187, 219, 1365, 1397
FaqI GGGAC 2 cut(s) 396, 1126
FatI CATG 5 cut(s) 85, 296, 756, 1086, 1343
FauI CCCGC 1 cut(s) 1083
FauNDI CATATG 1 cut(s) 1063
FbaI TGATCA 1 cut(s) 1216
FblI GTMKAC 3 cut(s) 330, 1083, 1185
Fnu4HI GCNGC 2 cut(s) 175, 786
FokI GGATG 4 cut(s) 421, 482, 1058, 1133
FriOI GRGCYC 1 cut(s) 125
Fsp4HI GCNGC 2 cut(s) 175, 786
FspBI CTAG 4 cut(s) 179, 993, 1095, 1101
GlaI GCGC 3 cut(s) 62, 368, 924
GluI GCNGC 2 cut(s) 175, 786
GsuI CTGGAG 2 cut(s) 709, 1248
HaeIII GGCC 4 cut(s) 177, 397, 769, 1025
HapII CCGG 4 cut(s) 105, 258, 870, 1286
HgaI GACGC 1 cut(s) 743
HhaI GCGC 3 cut(s) 63, 369, 925
Hin1I GRCGYC 1 cut(s) 735
Hin1II CATG 5 cut(s) 89, 300, 760, 1090, 1347
Hin6I GCGC 3 cut(s) 61, 367, 923
HinP1I GCGC 3 cut(s) 61, 367, 923
HinfI GANTC 6 cut(s) 198, 494, 749, 861, 1230, 1306
HpaII CCGG 4 cut(s) 105, 258, 870, 1286
Hpy166II GTNNAC 5 cut(s) 331, 669, 1084, 1186, 1224
Hpy188I TCNGA 5 cut(s) 326, 362, 754, 967, 1371
Hpy188III TCNNGA 5 cut(s) 105, 449, 688, 718, 954
Hpy8I GTNNAC 5 cut(s) 331, 669, 1084, 1186, 1224
Hpy99I CGWCG 3 cut(s) 619, 737, 1022
HpyAV CCTTC 5 cut(s) 68, 424, 535, 1309, 1366
HpyCH4III ACNGT 3 cut(s) 44, 916, 1485
HpyCH4IV ACGT 7 cut(s) 141, 372, 614, 900, 1128, 1139, 1200
HpyCH4V TGCA 6 cut(s) 139, 300, 376, 586, 932, 1067
HpyF10VI GCNNNNNNNGC 7 cut(s) 145, 171, 342, 373, 766, 837, 929
HpyF3I CTNAG 4 cut(s) 315, 592, 1368, 1392
HpySE526I ACGT 7 cut(s) 141, 372, 614, 900, 1128, 1139, 1200
Hsp92I GRCGYC 1 cut(s) 735
Hsp92II CATG 5 cut(s) 89, 300, 760, 1090, 1347
HspAI GCGC 3 cut(s) 61, 367, 923
Kpn2I TCCGGA 1 cut(s) 104
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 5 cut(s) 714, 996, 1014, 1123, 1216
LguI GCTCTTC 1 cut(s) 933
LmnI GCTCC 2 cut(s) 145, 310
Lsp1109I GCAGC 1 cut(s) 772
LweI GCATC 3 cut(s) 14, 443, 979
MaeI CTAG 4 cut(s) 179, 993, 1095, 1101
MaeII ACGT 7 cut(s) 141, 372, 614, 900, 1128, 1139, 1200
MaeIII GTNAC 5 cut(s) 44, 77, 481, 1273, 1405
MalI GATC 5 cut(s) 716, 998, 1016, 1125, 1218
MboI GATC 5 cut(s) 714, 996, 1014, 1123, 1216
MboII GAAGA 9 cut(s) 237, 290, 625, 950, 1351, 1408, 1481, 1484, 1487
MfeI CAATTG 2 cut(s) 11, 1269
MflI RGATCY 2 cut(s) 714, 996
MhlI GDGCHC 2 cut(s) 125, 627
MlsI TGGCCA 2 cut(s) 769, 1025
MluCI AATT 8 cut(s) 11, 98, 134, 682, 909, 1111, 1269, 1280
MluNI TGGCCA 2 cut(s) 769, 1025
MlyI GAGTC 3 cut(s) 743, 1239, 1300
MmeI TCCRAC 2 cut(s) 304, 385
Mox20I TGGCCA 2 cut(s) 769, 1025
MroI TCCGGA 1 cut(s) 104
MscI TGGCCA 2 cut(s) 769, 1025
MseI TTAA 2 cut(s) 813, 1203
MslI CAYNNNNRTG 1 cut(s) 75
Msp20I TGGCCA 2 cut(s) 769, 1025
MspA1I CMGCKG 1 cut(s) 1078
MspI CCGG 4 cut(s) 105, 258, 870, 1286
MspR9I CCNGG 2 cut(s) 259, 871
MunI CAATTG 2 cut(s) 11, 1269
MwoI GCNNNNNNNGC 7 cut(s) 145, 171, 342, 373, 766, 837, 929
NciI CCSGG 2 cut(s) 259, 871
NcoI CCATGG 1 cut(s) 85
NdeI CATATG 1 cut(s) 1063
NdeII GATC 5 cut(s) 714, 996, 1014, 1123, 1216
NlaIII CATG 5 cut(s) 89, 300, 760, 1090, 1347
NlaIV GGNNCC 3 cut(s) 147, 312, 874
NmeAIII GCCGAG 1 cut(s) 383
NmuCI GTSAC 3 cut(s) 77, 481, 1273
NspI RCATGY 1 cut(s) 760
OliI CACNNNNGTG 1 cut(s) 75
PaeR7I CTCGAG 1 cut(s) 779
PaqCI CACCTGC 1 cut(s) 632
PciSI GCTCTTC 1 cut(s) 933
PcsI WCGNNNNNNNCGW 1 cut(s) 786
PfeI GAWTC 3 cut(s) 198, 494, 861
PkrI GCNGC 2 cut(s) 176, 787
PleI GAGTC 3 cut(s) 743, 1238, 1300
PmaCI CACGTG 2 cut(s) 142, 373
PmlI CACGTG 2 cut(s) 142, 373
PpsI GAGTC 3 cut(s) 743, 1238, 1300
Ppu21I YACGTR 2 cut(s) 142, 373
PshBI ATTAAT 1 cut(s) 813
Psp1406I AACGTT 1 cut(s) 1200
PspCI CACGTG 2 cut(s) 142, 373
PspN4I GGNNCC 3 cut(s) 147, 312, 874
PspPI GGNCC 2 cut(s) 720, 873
PspXI VCTCGAGB 1 cut(s) 779
PstI CTGCAG 1 cut(s) 588
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 2 cut(s) 714, 996
RsaI GTAC 1 cut(s) 1105
RsaNI GTAC 1 cut(s) 1104
RseI CAYNNNNRTG 1 cut(s) 75
SapI GCTCTTC 1 cut(s) 933
SaqAI TTAA 2 cut(s) 813, 1203
SatI GCNGC 2 cut(s) 175, 786
Sau3AI GATC 5 cut(s) 714, 996, 1014, 1123, 1216
Sau96I GGNCC 2 cut(s) 720, 873
ScaI AGTACT 1 cut(s) 1105
SchI GAGTC 3 cut(s) 743, 1239, 1300
ScrFI CCNGG 2 cut(s) 259, 871
SduI GDGCHC 2 cut(s) 125, 627
SfaNI GCATC 3 cut(s) 14, 443, 979
SfcI CTRYAG 2 cut(s) 584, 850
Sfr274I CTCGAG 1 cut(s) 779
SinI GGWCC 2 cut(s) 720, 873
SlaI CTCGAG 1 cut(s) 779
SmiMI CAYNNNNRTG 1 cut(s) 75
SmlI CTYRAG 2 cut(s) 220, 779
SmoI CTYRAG 2 cut(s) 220, 779
Sse9I AATT 8 cut(s) 11, 98, 134, 682, 909, 1111, 1269, 1280
SsiI CCGC 6 cut(s) 174, 639, 829, 1045, 1076, 1167
SspI AATATT 1 cut(s) 811
SspMI CTAG 4 cut(s) 179, 993, 1095, 1101
StyD4I CCNGG 2 cut(s) 257, 869
StyI CCWWGG 4 cut(s) 85, 178, 498, 1416
TaaI ACNGT 3 cut(s) 44, 916, 1485
TaiI ACGT 7 cut(s) 144, 375, 617, 903, 1131, 1142, 1203
TaqI TCGA 3 cut(s) 567, 780, 1122
TaqII GACCGA 1 cut(s) 737
TasI AATT 8 cut(s) 11, 98, 134, 682, 909, 1111, 1269, 1280
TatI WGTACW 1 cut(s) 1103
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 3 cut(s) 198, 494, 861
Tru1I TTAA 2 cut(s) 813, 1203
Tru9I TTAA 2 cut(s) 813, 1203
TscAI CASTG 5 cut(s) 248, 279, 1033, 1396, 1488
TseFI GTSAC 3 cut(s) 77, 481, 1273
TseI GCWGC 1 cut(s) 785
Tsp45I GTSAC 3 cut(s) 77, 481, 1273
TspDTI ATGAA 3 cut(s) 282, 1168, 1332
TspGWI ACGGA 1 cut(s) 968
TspRI CASTG 5 cut(s) 248, 279, 1033, 1396, 1488
VpaK11BI GGWCC 2 cut(s) 720, 873
VspI ATTAAT 1 cut(s) 813
XapI RAATTY 3 cut(s) 682, 1111, 1280
XceI RCATGY 1 cut(s) 760
XhoI CTCGAG 1 cut(s) 779
XmaJI CCTAGG 1 cut(s) 178
XmiI GTMKAC 3 cut(s) 330, 1083, 1185
XspI CTAG 4 cut(s) 179, 993, 1095, 1101
ZrmI AGTACT 1 cut(s) 1105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.