FvH4_6g46040

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000217
Physical Location & Seq
Forward (+)
35193924 .. 35196071
2148 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g46040.t1

Sequence Viewer

Length: 1599 bp
ATGTCGGTCGTCTATTTGCCACCCACTATCGCTCTGAAATCAAACTGGTTCAACTTGTACTTGAACTACAGCGATGATTCCTATTCCTCGACGCAAGGTTTCGTCAAATTCAACGGATCCAATGTCTTCAGCCCGTTAGCCAAGTTCGAAGTGGTGTCGGCCAATACCGGGACGGGACGAGTACATCTCAGATGCCGGGCGAACAAGAAGTTTCTGCGGAGGAAAGATTCAACTTCTGTATTCATTACTCCGGAGGCAGATGAAGCAGAGGAGGACACAGCCAAATGGGGGTGTACACTGTTTGAGGCTCGAGAAGTTGAAGCTGGCAACACCACCCTAATCAATTTGTTCCATGTCCAATCACAATACTATACAAATGCCTGGGATGTTAGTGGAATCAGGTCCTTGAGATTAAATTCTGTCGGTCCGAATTTTCAGGGTAGGTATAATATCTTAGACCTGGAGTCAATGGTGATATTGCCGAAGTATGTGGCTTTCAAAGGCACCAACGGGAAGTACCTTAAGGTGGGAGCTACAGCGACGTCGTACCCAACATTCTCATCCACCGACAAGGGGTTTTCTGAGTGCGGGTTCGAGGTCATCACTGATGGCCATGGAAGGGCGCAAATTATGTCGTCCCACACCAAAAAGTACTTGAGGCTCGTCAAGGGCGGCAACTTTATTATGGCCGACTCAACTGGCGACACCACCGACCTGGACACCAAGTTTTGGCCTGTCAAGTTCAACAACGGTGCTGTCGCTCTCAAAAGCTTGGGCATCGACTTATTTTGTTGCCAATACACCCTCCCGACCTGGGGTGTAACAGACGGTTTACGCGCACTCCACGCCAGCATTAATATCGACGCAGTCTTAACTCTAGAAGAACTCGTGCACGAGAGGAGGATCTACAACACTAATTTTGACCTGAAGAATGCCATTATCTATGGCGAGACTCCGCTCACCATGGCCACTGCCAACGCCATCAATAACACCTCCAAAGACAACACGGTGGAATTCAAGTTCACGTACACGGAGAGTAAGAGCACCACGTGGACCTCCAGCCACTCGTGGATGGTCGGCATCAGTGTCACCGCCAGCTTCAAAGTCCCATTCATCGGCGGTGGTGAGGTCACCGCTAATGCAGAGTATTCTGGATCTTATGAGTGGGGAGAAACTCTTGAGTCCGAACAAACAGTGGAGAAAACGTACACGGCCACAGTACCGGCAAACTCTTCGATAAATCTGACCGCGATTGCAACACAGGGAACTTGCGACGTGCGTTACTCTTATTATCAGCGAGATTTGCTTTATAACGGTCAGACAGTTATTTACCAGAAAGATGATGGGTTGTGTACGGGAATTAATTCATATAACTTCCACATCGAGGTCACAACTGTGAAAGATCTGGGATCGACAGCTGAATCCAGGACAGTACAAAAGATACCTCTACCTCTATTGTCTGGACCAACCACCCCATTGACCTCGACCACCAGCACGGAACAAGAATTGTCAGAGGTGCAATTTGAAGAGTGGATTGTCCAAGAAGTACCAGCTCTGCCATTGAAGACCAACGAAGAAGGCGTAGAAACCATAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2 Fascin

Protein Analysis

533

Amino Acids

58.9

Weight (kDa)

5.24

Isoelectric Point (pI)

26.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 6 - 131 2.6e-18 Agglutinin domain
Aerolysin PF01117 307 - 430 6.3e-07 Aerolysin toxin
ETX_MTX2 PF03318 317 - 427 6.9e-06 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1311
AatII GACGTC 1 cut(s) 545
AccB1I GGYRCC 1 cut(s) 503
AccB7I CCANNNNNTGG 1 cut(s) 729
AccBSI CCGCTC 1 cut(s) 958
AccII CGCG 2 cut(s) 837, 1250
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 8 cut(s) 217, 588, 672, 956, 1092, 1119, 1134, 1248
AclWI GGATC 5 cut(s) 111, 124, 911, 1162, 1417
AcoI YGGCCR 5 cut(s) 159, 610, 687, 966, 1212
AcsI RAATTY 4 cut(s) 107, 415, 430, 1013
AcuI CTGAAG 2 cut(s) 112, 947
AcvI CACGTG 1 cut(s) 1050
AcyI GRCGYC 1 cut(s) 542
AdeI CACNNNGTG 1 cut(s) 1050
AflII CTTAAG 1 cut(s) 521
AhdI GACNNNNNGTC 1 cut(s) 463
AjiI CACGTC 1 cut(s) 1276
AjnI CCWGG 5 cut(s) 380, 459, 714, 812, 1424
AleI CACNNNNGTG 1 cut(s) 1394
AloI GAACNNNNNNTCC 2 cut(s) 1004, 1036
AluBI AGCT 7 cut(s) 323, 533, 771, 1098, 1418, 1553, 1595
AluI AGCT 7 cut(s) 323, 533, 771, 1098, 1418, 1553, 1595
Alw21I GWGCWC 2 cut(s) 894, 1046
Alw26I GTCTC 1 cut(s) 944
Alw44I GTGCAC 1 cut(s) 890
AlwI GGATC 5 cut(s) 111, 124, 911, 1162, 1417
Ama87I CYCGRG 1 cut(s) 309
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 6 cut(s) 159, 610, 687, 731, 966, 1212
ApaLI GTGCAC 1 cut(s) 890
ApoI RAATTY 4 cut(s) 107, 415, 430, 1013
AseI ATTAAT 2 cut(s) 855, 1362
Asp700I GAANNNNTTC 1 cut(s) 1363
AspLEI GCGC 2 cut(s) 625, 839
AspS9I GGNCC 4 cut(s) 402, 425, 1053, 1463
AsuC2I CCSGG 2 cut(s) 169, 197
AsuHPI GGTGA 5 cut(s) 484, 952, 1081, 1123, 1136
AsuII TTCGAA 1 cut(s) 147
AvaI CYCGRG 1 cut(s) 309
AvaII GGWCC 4 cut(s) 402, 425, 1053, 1463
BaeGI GKGCMC 1 cut(s) 894
BalI TGGCCA 2 cut(s) 612, 968
BamHI GGATCC 1 cut(s) 116
BanI GGYRCC 1 cut(s) 503
BauI CACGAG 3 cut(s) 887, 893, 1066
BbrPI CACGTG 1 cut(s) 1050
BbsI GAAGAC 2 cut(s) 118, 1571
Bbv12I GWGCWC 2 cut(s) 894, 1046
BccI CCATC 4 cut(s) 602, 989, 1066, 1337
BceAI ACGGC 1 cut(s) 1227
BcgI CGANNNNNNTGC 4 cut(s) 841, 875, 1215, 1249
BciT130I CCWGG 5 cut(s) 382, 461, 716, 814, 1426
BcnI CCSGG 2 cut(s) 169, 197
BcoDI GTCTC 1 cut(s) 944
BfaI CTAG 1 cut(s) 878
BfmI CTRYAG 2 cut(s) 67, 534
BfrI CTTAAG 1 cut(s) 521
BglII AGATCT 1 cut(s) 1402
BisI GCNGC 1 cut(s) 673
BlsI GCNGC 1 cut(s) 674
BmcAI AGTACT 1 cut(s) 653
Bme1390I CCNGG 7 cut(s) 169, 197, 382, 461, 716, 814, 1426
Bme18I GGWCC 4 cut(s) 402, 425, 1053, 1463
BmeRI GACNNNNNGTC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 309
BmgBI CACGTC 1 cut(s) 1276
BmgT120I GGNCC 4 cut(s) 402, 425, 1053, 1463
BmiI GGNNCC 2 cut(s) 118, 505
BmrFI CCNGG 7 cut(s) 169, 197, 382, 461, 716, 814, 1426
BmsI GCATC 3 cut(s) 182, 786, 1089
BpiI GAAGAC 2 cut(s) 118, 1571
BplI GAGNNNNNCTC 2 cut(s) 171, 203
BpmI CTGGAG 2 cut(s) 482, 1042
Bpu14I TTCGAA 1 cut(s) 147
BpuEI CTTGAG 3 cut(s) 427, 676, 1199
BpuMI CCSGG 2 cut(s) 169, 197
BsaAI YACGTR 2 cut(s) 1026, 1050
BsaHI GRCGYC 1 cut(s) 542
BsaJI CCNNGG 4 cut(s) 381, 613, 813, 963
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 4 cut(s) 825, 855, 1190, 1220
Bse118I RCCGGY 1 cut(s) 1222
Bse1I ACTGG 2 cut(s) 50, 703
BseAI TCCGGA 1 cut(s) 250
BseBI CCWGG 5 cut(s) 382, 461, 716, 814, 1426
BseDI CCNNGG 4 cut(s) 381, 613, 813, 963
BseGI GGATG 3 cut(s) 391, 560, 1077
BseMII CTCAG 2 cut(s) 202, 573
BseNI ACTGG 2 cut(s) 50, 703
BseRI GAGGAG 2 cut(s) 284, 913
BseSI GKGCMC 1 cut(s) 894
Bsh1236I CGCG 2 cut(s) 837, 1250
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 6 cut(s) 161, 612, 689, 733, 968, 1214
BshNI GGYRCC 1 cut(s) 503
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 2 cut(s) 894, 1046
BsiHKCI CYCGRG 1 cut(s) 309
BsiSI CCGG 4 cut(s) 168, 196, 251, 1223
BslFI GGGAC 4 cut(s) 184, 189, 622, 1091
BsmAI GTCTC 1 cut(s) 944
BsmFI GGGAC 4 cut(s) 184, 189, 622, 1091
BsmI GAATGC 1 cut(s) 937
BsnI GGCC 6 cut(s) 161, 612, 689, 733, 968, 1214
BsoBI CYCGRG 1 cut(s) 309
Bsp119I TTCGAA 1 cut(s) 147
Bsp1286I GDGCHC 2 cut(s) 894, 1046
Bsp13I TCCGGA 1 cut(s) 250
Bsp1407I TGTACA 1 cut(s) 293
Bsp143I GATC 5 cut(s) 116, 903, 1154, 1402, 1409
Bsp19I CCATGG 2 cut(s) 613, 963
BspACI CCGC 8 cut(s) 217, 588, 672, 956, 1092, 1119, 1134, 1248
BspANI GGCC 6 cut(s) 161, 612, 689, 733, 968, 1214
BspCNI CTCAG 2 cut(s) 201, 574
BspEI TCCGGA 1 cut(s) 250
BspFNI CGCG 2 cut(s) 837, 1250
BspLI GGNNCC 2 cut(s) 118, 505
BspPI GGATC 5 cut(s) 111, 124, 911, 1162, 1417
BspT104I TTCGAA 1 cut(s) 147
BspT107I GGYRCC 1 cut(s) 503
BspTI CTTAAG 1 cut(s) 521
BsrBI CCGCTC 1 cut(s) 958
BsrFI RCCGGY 1 cut(s) 1222
BsrGI TGTACA 1 cut(s) 293
BsrI ACTGG 2 cut(s) 50, 703
BssAI RCCGGY 1 cut(s) 1222
BssECI CCNNGG 4 cut(s) 381, 613, 813, 963
BssMI GATC 5 cut(s) 116, 903, 1154, 1402, 1409
BssNI GRCGYC 1 cut(s) 542
BssSI CACGAG 3 cut(s) 887, 893, 1066
BssT1I CCWWGG 2 cut(s) 613, 963
Bst2BI CACGAG 3 cut(s) 887, 893, 1066
Bst2UI CCWGG 5 cut(s) 382, 461, 716, 814, 1426
Bst6I CTCTTC 2 cut(s) 1237, 1521
BstACI GRCGYC 1 cut(s) 542
BstAFI CTTAAG 1 cut(s) 521
BstAUI TGTACA 1 cut(s) 293
BstBAI YACGTR 2 cut(s) 1026, 1050
BstBI TTCGAA 1 cut(s) 147
BstC8I GCNNGC 3 cut(s) 325, 850, 1096
BstDEI CTNAG 3 cut(s) 188, 454, 582
BstDSI CCRYGG 2 cut(s) 613, 963
BstEII GGTNACC 1 cut(s) 1129
BstF5I GGATG 3 cut(s) 391, 560, 1077
BstFNI CGCG 2 cut(s) 837, 1250
BstHHI GCGC 2 cut(s) 625, 839
BstKTI GATC 5 cut(s) 119, 906, 1157, 1405, 1412
BstMAI GTCTC 1 cut(s) 944
BstMBI GATC 5 cut(s) 116, 903, 1154, 1402, 1409
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 3 cut(s) 263, 845, 1303
BstNI CCWGG 5 cut(s) 382, 461, 716, 814, 1426
BstPI GGTNACC 1 cut(s) 1129
BstSCI CCNGG 7 cut(s) 167, 195, 380, 459, 714, 812, 1424
BstSFI CTRYAG 2 cut(s) 67, 534
BstSLI GKGCMC 1 cut(s) 894
BstUI CGCG 2 cut(s) 837, 1250
BstV2I GAAGAC 2 cut(s) 118, 1571
BstX2I RGATCY 4 cut(s) 116, 903, 1154, 1402
BstXI CCANNNNNNTGG 1 cut(s) 715
BstYI RGATCY 4 cut(s) 116, 903, 1154, 1402
BsuRI GGCC 6 cut(s) 161, 612, 689, 733, 968, 1214
BtgI CCRYGG 2 cut(s) 613, 963
BtgZI GCGATG 1 cut(s) 87
BtrI CACGTC 1 cut(s) 1276
BtsCI GGATG 3 cut(s) 391, 560, 1077
BtsI GCAGTG 1 cut(s) 969
BtsIMutI CAGTG 5 cut(s) 296, 603, 969, 1090, 1200
Cac8I GCNNGC 3 cut(s) 325, 850, 1096
CfoI GCGC 2 cut(s) 625, 839
Cfr10I RCCGGY 1 cut(s) 1222
Cfr13I GGNCC 4 cut(s) 402, 425, 1053, 1463
CpoI CGGWCCG 1 cut(s) 425
CseI GACGC 2 cut(s) 100, 872
CspI CGGWCCG 1 cut(s) 425
CviAII CATG 3 cut(s) 353, 614, 964
DdeI CTNAG 3 cut(s) 188, 454, 582
DpnI GATC 5 cut(s) 118, 905, 1156, 1404, 1411
DpnII GATC 5 cut(s) 116, 903, 1154, 1402, 1409
DraIII CACNNNGTG 1 cut(s) 1050
DriI GACNNNNNGTC 1 cut(s) 463
EaeI YGGCCR 5 cut(s) 159, 610, 687, 966, 1212
Eam1104I CTCTTC 2 cut(s) 1237, 1521
Eam1105I GACNNNNNGTC 1 cut(s) 463
EarI CTCTTC 2 cut(s) 1237, 1521
Eco130I CCWWGG 2 cut(s) 613, 963
Eco47I GGWCC 4 cut(s) 402, 425, 1053, 1463
Eco57I CTGAAG 2 cut(s) 112, 947
Eco72I CACGTG 1 cut(s) 1050
Eco88I CYCGRG 1 cut(s) 309
Eco91I GGTNACC 1 cut(s) 1129
EcoO109I RGGNCCY 1 cut(s) 402
EcoO65I GGTNACC 1 cut(s) 1129
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 5 cut(s) 380, 459, 714, 812, 1424
EcoT14I CCWWGG 2 cut(s) 613, 963
ErhI CCWWGG 2 cut(s) 613, 963
FaeI CATG 3 cut(s) 356, 617, 967
FaqI GGGAC 4 cut(s) 184, 189, 622, 1091
FatI CATG 3 cut(s) 352, 613, 963
FauI CCCGC 1 cut(s) 581
Fnu4HI GCNGC 1 cut(s) 673
FokI GGATG 3 cut(s) 398, 547, 1084
Fsp4HI GCNGC 1 cut(s) 673
FspBI CTAG 1 cut(s) 878
GlaI GCGC 2 cut(s) 624, 838
GluI GCNGC 1 cut(s) 673
GsuI CTGGAG 2 cut(s) 482, 1042
HaeIII GGCC 6 cut(s) 161, 612, 689, 733, 968, 1214
HapII CCGG 4 cut(s) 168, 196, 251, 1223
HgaI GACGC 2 cut(s) 100, 872
HhaI GCGC 2 cut(s) 625, 839
Hin1I GRCGYC 1 cut(s) 542
Hin1II CATG 3 cut(s) 356, 617, 967
Hin6I GCGC 2 cut(s) 623, 837
HinP1I GCGC 2 cut(s) 623, 837
HindIII AAGCTT 1 cut(s) 769
HinfI GANTC 8 cut(s) 77, 227, 396, 464, 692, 952, 1181, 1421
HpaII CCGG 4 cut(s) 168, 196, 251, 1223
HphI GGTGA 5 cut(s) 484, 952, 1081, 1123, 1136
Hpy166II GTNNAC 9 cut(s) 294, 296, 833, 892, 1023, 1029, 1053, 1209, 1353
Hpy188I TCNGA 8 cut(s) 36, 191, 429, 583, 1186, 1245, 1320, 1513
Hpy188III TCNNGA 7 cut(s) 251, 311, 808, 878, 1152, 1178, 1461
Hpy8I GTNNAC 9 cut(s) 294, 296, 833, 892, 1023, 1029, 1053, 1209, 1353
Hpy99I CGWCG 5 cut(s) 94, 544, 547, 866, 1277
HpyAV CCTTC 2 cut(s) 612, 1571
HpyCH4IV ACGT 5 cut(s) 542, 1025, 1049, 1205, 1275
HpyCH4V TGCA 4 cut(s) 892, 1142, 1256, 1519
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 845, 1303
HpyF3I CTNAG 3 cut(s) 188, 454, 582
HpySE526I ACGT 5 cut(s) 542, 1025, 1049, 1205, 1275
Hsp92I GRCGYC 1 cut(s) 542
Hsp92II CATG 3 cut(s) 356, 617, 967
HspAI GCGC 2 cut(s) 623, 837
Kpn2I TCCGGA 1 cut(s) 250
Kzo9I GATC 5 cut(s) 116, 903, 1154, 1402, 1409
LmnI GCTCC 1 cut(s) 530
LweI GCATC 3 cut(s) 182, 786, 1089
MaeI CTAG 1 cut(s) 878
MaeII ACGT 5 cut(s) 542, 1025, 1049, 1205, 1275
MaeIII GTNAC 5 cut(s) 820, 1087, 1129, 1280, 1387
MalI GATC 5 cut(s) 118, 905, 1156, 1404, 1411
MbiI CCGCTC 1 cut(s) 958
MboI GATC 5 cut(s) 116, 903, 1154, 1402, 1409
MboII GAAGA 7 cut(s) 118, 893, 940, 1224, 1538, 1576, 1586
MflI RGATCY 4 cut(s) 116, 903, 1154, 1402
MhlI GDGCHC 2 cut(s) 894, 1046
MlsI TGGCCA 2 cut(s) 612, 968
MluNI TGGCCA 2 cut(s) 612, 968
MlyI GAGTC 4 cut(s) 473, 686, 946, 1190
Mox20I TGGCCA 2 cut(s) 612, 968
MroI TCCGGA 1 cut(s) 250
MroXI GAANNNNTTC 1 cut(s) 1363
MscI TGGCCA 2 cut(s) 612, 968
MseI TTAA 5 cut(s) 413, 522, 855, 872, 1362
MslI CAYNNNNRTG 1 cut(s) 1394
Msp20I TGGCCA 2 cut(s) 612, 968
MspA1I CMGCKG 1 cut(s) 1418
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 4 cut(s) 168, 196, 251, 1223
MspR9I CCNGG 7 cut(s) 169, 197, 382, 461, 716, 814, 1426
Mva1269I GAATGC 1 cut(s) 937
MvaI CCWGG 5 cut(s) 382, 461, 716, 814, 1426
MvnI CGCG 2 cut(s) 837, 1250
MwoI GCNNNNNNNGC 3 cut(s) 263, 845, 1303
NciI CCSGG 2 cut(s) 169, 197
NcoI CCATGG 2 cut(s) 613, 963
NdeII GATC 5 cut(s) 116, 903, 1154, 1402, 1409
NlaIII CATG 3 cut(s) 356, 617, 967
NlaIV GGNNCC 2 cut(s) 118, 505
NmuCI GTSAC 3 cut(s) 1087, 1129, 1387
NspV TTCGAA 1 cut(s) 147
OliI CACNNNNGTG 1 cut(s) 1394
PaeR7I CTCGAG 1 cut(s) 309
PcsI WCGNNNNNNNCGW 1 cut(s) 1578
PctI GAATGC 1 cut(s) 937
PdmI GAANNNNTTC 1 cut(s) 1363
PfeI GAWTC 4 cut(s) 77, 227, 396, 1421
PflFI GACNNNGTC 1 cut(s) 866
PflMI CCANNNNNTGG 1 cut(s) 729
PfoI TCCNGGA 1 cut(s) 1424
PkrI GCNGC 1 cut(s) 674
PleI GAGTC 4 cut(s) 472, 686, 946, 1189
PmaCI CACGTG 1 cut(s) 1050
PmlI CACGTG 1 cut(s) 1050
PpsI GAGTC 4 cut(s) 472, 686, 946, 1189
Ppu21I YACGTR 2 cut(s) 1026, 1050
PpuMI RGGWCCY 1 cut(s) 402
PshBI ATTAAT 2 cut(s) 855, 1362
PsiI TTATAA 1 cut(s) 1311
Psp5II RGGWCCY 1 cut(s) 402
Psp6I CCWGG 5 cut(s) 380, 459, 714, 812, 1424
PspCI CACGTG 1 cut(s) 1050
PspEI GGTNACC 1 cut(s) 1129
PspGI CCWGG 5 cut(s) 380, 459, 714, 812, 1424
PspN4I GGNNCC 2 cut(s) 118, 505
PspPI GGNCC 4 cut(s) 402, 425, 1053, 1463
PspPPI RGGWCCY 1 cut(s) 402
PsuI RGATCY 4 cut(s) 116, 903, 1154, 1402
PsyI GACNNNGTC 1 cut(s) 866
PvuII CAGCTG 1 cut(s) 1418
RseI CAYNNNNRTG 1 cut(s) 1394
Rsr2I CGGWCCG 1 cut(s) 425
RsrII CGGWCCG 1 cut(s) 425
SaqAI TTAA 5 cut(s) 413, 522, 855, 872, 1362
SatI GCNGC 1 cut(s) 673
Sau3AI GATC 5 cut(s) 116, 903, 1154, 1402, 1409
Sau96I GGNCC 4 cut(s) 402, 425, 1053, 1463
ScaI AGTACT 1 cut(s) 653
SchI GAGTC 4 cut(s) 473, 686, 946, 1190
ScrFI CCNGG 7 cut(s) 169, 197, 382, 461, 716, 814, 1426
SduI GDGCHC 2 cut(s) 894, 1046
SfaNI GCATC 3 cut(s) 182, 786, 1089
SfcI CTRYAG 2 cut(s) 67, 534
Sfr274I CTCGAG 1 cut(s) 309
SfuI TTCGAA 1 cut(s) 147
SinI GGWCC 4 cut(s) 402, 425, 1053, 1463
SlaI CTCGAG 1 cut(s) 309
SmiMI CAYNNNNRTG 1 cut(s) 1394
SmlI CTYRAG 5 cut(s) 309, 406, 521, 655, 1178
SmoI CTYRAG 5 cut(s) 309, 406, 521, 655, 1178
SsiI CCGC 8 cut(s) 217, 588, 672, 956, 1092, 1119, 1134, 1248
SspMI CTAG 1 cut(s) 878
StyD4I CCNGG 7 cut(s) 167, 195, 380, 459, 714, 812, 1424
StyI CCWWGG 2 cut(s) 613, 963
TaiI ACGT 5 cut(s) 545, 1028, 1052, 1208, 1278
TaqII GACCGA 1 cut(s) 413
TatI WGTACW 5 cut(s) 57, 181, 293, 651, 1432
TauI GCSGC 1 cut(s) 675
TfiI GAWTC 4 cut(s) 77, 227, 396, 1421
Tru1I TTAA 5 cut(s) 413, 522, 855, 872, 1362
Tru9I TTAA 5 cut(s) 413, 522, 855, 872, 1362
TscAI CASTG 5 cut(s) 303, 610, 976, 1090, 1200
TseFI GTSAC 3 cut(s) 1087, 1129, 1387
Tsp45I GTSAC 3 cut(s) 1087, 1129, 1387
TspDTI ATGAA 4 cut(s) 232, 276, 1102, 1356
TspGWI ACGGA 3 cut(s) 129, 1046, 1511
TspRI CASTG 5 cut(s) 303, 610, 976, 1090, 1200
Tth111I GACNNNGTC 1 cut(s) 866
Van91I CCANNNNNTGG 1 cut(s) 729
Vha464I CTTAAG 1 cut(s) 521
VneI GTGCAC 1 cut(s) 890
VpaK11BI GGWCC 4 cut(s) 402, 425, 1053, 1463
VspI ATTAAT 2 cut(s) 855, 1362
XapI RAATTY 4 cut(s) 107, 415, 430, 1013
XbaI TCTAGA 1 cut(s) 877
XcmI CCANNNNNNNNNTGG 2 cut(s) 148, 1340
XhoI CTCGAG 1 cut(s) 309
XmnI GAANNNNTTC 1 cut(s) 1363
XspI CTAG 1 cut(s) 878
ZraI GACGTC 1 cut(s) 543
ZrmI AGTACT 1 cut(s) 653
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.