Rh1BG118400

Agglutinin domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000217
Physical Location & Seq
Forward (+)
20230527 .. 20232556
2030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG118400.1

Sequence Viewer

Length: 1176 bp
ATGCTTGTGTTTACAAAAAATGTTCCATATGAGCCAGCAGGGTTCATGAAGTGCATTAGAGAACAAGTTGTGAGTCCACAGGCAAAGTTTGAAGTGGAGATGGCAAAGACTGGGAATGGACTGGTGCACATAAGATGCTGCTACAACAACAAGTACTGGGTGACAAACCAGGCTGCTAGGGATTATCCAAACTGGATAGTTGCGTCCGCGGACAAACCAGAGGAAGACCAATCAAAAAGCTCCTGCACCTTGTTCGAGCCTAGGTTTGCAGAAGGCCAAACACAAGTCCGATTTATCCACGTCCAACTCCGGATCTCCGTATCCTTGTGGAAGAGTGCTACTACATTCGAGAATGCCTTATATCTAGGAGCACGCGGCTATGTTTTCGAAGTTGTTGACTGGGAATCGCTGGTGATACTTCCCCCACGGGTGGCCTTCAAATCCTTAGAAGATGGCAGTTACCTCTGTTCCCGCTGGATCGAACGACACCCATATCAAAGGTTCGAGTCCAACTTGGATGTTGGAGATCCATTGGTGGCCAAGGAGTTATTCGTCACTGTTGATGGAAGCCTTCGTATAAAGGACGGGCACTATGGCAAATTCTGGAGGCGTAGCCCTAACTGGATCTGGGCTGATGCATCATCCGAAAACACGTCCGACGACACTTTGTTTTGGCCTGTCAAAATCCAAGACAACGTCATTGCTCTTCACAACTTGGGTAACAAAAATGTTTGCGGTGGACTCACCACCGAATTCAAAACCAACTGTCTCAACGCCGCCTACCCTAATATCTGTAAACAGTCAAAGCTGGTGGTGGAAGAGCTTGTTCTTTCAAGGAACATCTACAATATCAATTTCCGACTCTCCGACTCCAGGATCTACCACGAGCAGGTCATAGAAATGGACACAGCTCTCACCGTTAACGACAACCCAAACAGAGACTCCACTATCAGCCTCAAGTTTGTGGAAAAAGATTCCAGGACCCGTAGTTGGAATGGCAGCGTTTCATTGAAGTTGGGTGTCAAAACAACTCTCCAAGTCAAATCTGTTCCACTAATTCTTGACGGAAATATCGAACTTTCGGCTGAGGTTACGACAGCATACCAGTGGGGAGAAACTACCACAGTTGAACATACCAGGGAAGCCAATTATGCTGTTGTTGTGCCACCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aerolysin Agglutinin ETX_MTX2

Protein Analysis

391

Amino Acids

44.57

Weight (kDa)

6.42

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agglutinin PF07468 20 - 118 6.7e-17 Agglutinin domain
Agglutinin PF07468 143 - 272 1.1e-07 Agglutinin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000217)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g17710 FvH4_6g45590 FvH4_6g45591 FvH4_6g45770 FvH4_6g45770 FvH4_6g46030 FvH4_6g46040 FvH4_7g07020 FvH4_7g07071 FvH4_7g07080
malus_domestica MD01G1104300.v1.1 MD02G1240000.v1.1 MD02G1240200.v1.1 MD03G1201400.v1.1 MD03G1201500.v1.1 MD07G1171100.v1.1
prunus_persica Prupe.2G087400_v2.0.a1 Prupe.2G097500_v2.0.a1 Prupe.2G097700_v2.0.a1 Prupe.2G097800_v2.0.a1 Prupe.3G153100_v2.0.a1 Prupe.3G153300_v2.0.a1 Prupe.3G153600_v2.0.a1 Prupe.5G237200_v2.0.a1
pyrus_communis pycom03g15270 pycom06g20700 pycom07g06030 pycom10g01810 pycom10g01820 pycom10g12090 pycom14g20090 pycom14g20100 pycom14g20110 pycom14g20120
rosa_chinensis RchiOBHm_Chr1g0336971 RchiOBHm_Chr1g0337031 RchiOBHm_Chr2g0163571 RchiOBHm_Chr2g0163591 RchiOBHm_Chr2g0163631 RchiOBHm_Chr2g0163661 RchiOBHm_Chr2g0163671 RchiOBHm_Chr2g0163691 RchiOBHm_Chr2g0163741 RchiOBHm_Chr5g0011821 RchiOBHm_Chr5g0011831 RchiOBHm_Chr5g0011841 RchiOBHm_Chr5g0053101 RchiOBHm_Chr5g0072501
rosa_laevigata RLG00000010009 RLG00000021413 RLG00000029310 RLG00000029318 RLG00000036313
rosa_multiflora Rmu_co7975848.1_g000001 Rmu_co8020886.1_g000001 Rmu_co8136580.1_g000001 Rmu_co8177372.1_g000001 Rmu_co8207014.1_g000001 Rmu_co8232187.1_g000001 Rmu_co8277595.1_g000001 Rmu_co8389219.1_g000001 Rmu_co8427877.1_g000001 Rmu_co8467587.1_g000001 Rmu_sc0001475.1_g000015 Rmu_sc0001475.1_g000016 Rmu_sc0001475.1_g000017 Rmu_sc0003462.1_g000002 Rmu_sc0003462.1_g000003 Rmu_sc0003484.1_g000002 Rmu_sc0004918.1_g000004 Rmu_sc0004918.1_g000006 Rmu_sc0004918.1_g000007 Rmu_sc0004918.1_g000009 Rmu_sc0006596.1_g000003 Rmu_sc0006596.1_g000005 Rmu_sc0006596.1_g000010 Rmu_sc0008676.1_g000021 Rmu_sc0014330.1_g000002 Rmu_sc0016133.1_g000002 Rmu_sc0016133.1_g000003 Rmu_sc0016133.1_g000004 Rmu_sc0026453.1_g000003 Rmu_sc0026453.1_g000004 Rmu_sc0030660.1_g000001
rosa_roxburghii Rroxscaffold_1G00008700 Rroxscaffold_1G00064740 Rroxscaffold_2G00086950 Rroxscaffold_2G00087100 Rroxscaffold_2G00087140 Rroxscaffold_4G00302080 Rroxscaffold_4G00315020 Rroxscaffold_4G00315170 Rroxscaffold_5G00358800
rosa_rugosa Rorug01G0129200 Rorug01G0130600 Rorug01G0130700 Rorug02G0503700 Rorug02G0503800 Rorug02G0503900 Rorug02G0504000 Rorug02G0504300 Rorug05G0268200 Rorug05G0418700 Rorug05G0418800
rosa_samantha Rh1AG151100 Rh1AG151300 Rh1BG118400 Rh1BG120600 Rh1CG141500 Rh1CG142500 Rh1DG157300 Rh1DG158500 Rh2AG570600 Rh2AG570800 Rh2AG571200 Rh2AG571300 Rh2AG571500 Rh2AG571900 Rh2AG572000 Rh2AG572200 Rh2CG552600 Rh2CG552800 Rh2CG553000 Rh2CG553300 Rh2CG553400 Rh2CG553700 Rh5CG100400 Rh5CG100500 Rh5CG100600 Rh5CG100700 Rh5CG519100 Rh5DG086600 Rh5DG086700 Rh5DG086800 Rh5DG086900 Rh5DG087000 Rh5DG087100 Rh5DG367600 Rh5DG507300
rosa_wichuraiana Rw1G012130 Rw1G012240 Rw1G012380 Rw2G047240 Rw2G047260 Rw2G047270 Rw2G047290 Rw5G007940 Rw5G044120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 880
AccII CGCG 2 cut(s) 209, 375
AccIII TCCGGA 1 cut(s) 309
AciI CCGC 6 cut(s) 207, 209, 375, 472, 735, 777
AclWI GGATC 5 cut(s) 320, 485, 521, 632, 884
AcoI YGGCCR 1 cut(s) 537
AcsI RAATTY 2 cut(s) 599, 752
AfaI GTAC 1 cut(s) 155
AfiI CCNNNNNNNGG 4 cut(s) 430, 873, 889, 990
AflIII ACRYGT 1 cut(s) 651
AgsI TTSAA 6 cut(s) 92, 439, 757, 834, 1012, 1130
AjiI CACGTC 2 cut(s) 301, 654
AjnI CCWGG 4 cut(s) 168, 872, 977, 1136
AjuI GAANNNNNNNTTGG 2 cut(s) 533, 565
AleI CACNNNNGTG 1 cut(s) 1171
AluBI AGCT 4 cut(s) 240, 808, 823, 911
AluI AGCT 4 cut(s) 240, 808, 823, 911
Alw21I GWGCWC 2 cut(s) 129, 373
Alw26I GTCTC 2 cut(s) 773, 933
Alw44I GTGCAC 1 cut(s) 125
AlwI GGATC 5 cut(s) 320, 485, 521, 632, 884
Aor13HI TCCGGA 1 cut(s) 309
AoxI GGCC 4 cut(s) 274, 432, 537, 674
ApaLI GTGCAC 1 cut(s) 125
ApeKI GCWGC 3 cut(s) 138, 173, 999
ApoI RAATTY 2 cut(s) 599, 752
AspA2I CCTAGG 1 cut(s) 260
AspS9I GGNCC 1 cut(s) 981
AsuHPI GGTGA 4 cut(s) 172, 424, 736, 907
AsuII TTCGAA 1 cut(s) 387
AvaII GGWCC 1 cut(s) 981
AvrII CCTAGG 1 cut(s) 260
BaeGI GKGCMC 2 cut(s) 129, 591
BalI TGGCCA 1 cut(s) 539
BauI CACGAG 1 cut(s) 884
BbsI GAAGAC 1 cut(s) 231
Bbv12I GWGCWC 2 cut(s) 129, 373
BbvCI CCTCAGC 1 cut(s) 1086
BbvI GCAGC 3 cut(s) 125, 160, 1011
BccI CCATC 3 cut(s) 94, 446, 557
BcgI CGANNNNNNTGC 2 cut(s) 235, 269
BciT130I CCWGG 4 cut(s) 170, 874, 979, 1138
BciVI GTATCC 1 cut(s) 331
BcoDI GTCTC 2 cut(s) 773, 933
BfaI CTAG 3 cut(s) 177, 261, 365
BfuAI ACCTGC 1 cut(s) 880
BfuI GTATCC 1 cut(s) 331
BisI GCNGC 5 cut(s) 139, 174, 376, 777, 1000
BlnI CCTAGG 1 cut(s) 260
BlsI GCNGC 5 cut(s) 140, 175, 377, 778, 1001
BmcAI AGTACT 1 cut(s) 155
Bme1390I CCNGG 4 cut(s) 170, 874, 979, 1138
Bme18I GGWCC 1 cut(s) 981
BmgBI CACGTC 2 cut(s) 301, 654
BmgT120I GGNCC 1 cut(s) 981
BmiI GGNNCC 1 cut(s) 983
BmrFI CCNGG 4 cut(s) 170, 874, 979, 1138
BmrI ACTGGG 3 cut(s) 120, 166, 409
BmsI GCATC 3 cut(s) 125, 625, 647
BmuI ACTGGG 3 cut(s) 120, 166, 409
BpiI GAAGAC 1 cut(s) 231
BpmI CTGGAG 2 cut(s) 625, 856
Bpu10I CCTNAGC 1 cut(s) 1086
Bpu14I TTCGAA 1 cut(s) 387
BpuEI CTTGAG 1 cut(s) 941
BsaJI CCNNGG 6 cut(s) 207, 260, 425, 540, 1137, 1169
BsaWI WCCGGW 1 cut(s) 309
BsaXI ACNNNNNCTCC 2 cut(s) 926, 956
Bsc4I CCNNNNNNNGG 4 cut(s) 430, 873, 889, 990
Bse1I ACTGG 7 cut(s) 115, 126, 161, 197, 404, 626, 1105
Bse3DI GCAATG 1 cut(s) 699
BseAI TCCGGA 1 cut(s) 309
BseBI CCWGG 4 cut(s) 170, 874, 979, 1138
BseDI CCNNGG 6 cut(s) 207, 260, 425, 540, 1137, 1169
BseGI GGATG 2 cut(s) 523, 641
BseLI CCNNNNNNNGG 4 cut(s) 430, 873, 889, 990
BseMI GCAATG 1 cut(s) 699
BseMII CTCAG 1 cut(s) 1077
BseNI ACTGG 7 cut(s) 115, 126, 161, 197, 404, 626, 1105
BseSI GKGCMC 2 cut(s) 129, 591
BseXI GCAGC 3 cut(s) 125, 160, 1011
BsgI GTGCAG 1 cut(s) 229
Bsh1236I CGCG 2 cut(s) 209, 375
BshFI GGCC 4 cut(s) 276, 434, 539, 676
BsiHKAI GWGCWC 2 cut(s) 129, 373
BsiSI CCGG 1 cut(s) 310
BslI CCNNNNNNNGG 4 cut(s) 430, 873, 889, 990
BsmAI GTCTC 2 cut(s) 773, 933
BsmI GAATGC 1 cut(s) 358
BsnI GGCC 4 cut(s) 276, 434, 539, 676
Bsp119I TTCGAA 1 cut(s) 387
Bsp1286I GDGCHC 3 cut(s) 129, 373, 591
Bsp13I TCCGGA 1 cut(s) 309
Bsp143I GATC 5 cut(s) 312, 477, 526, 624, 876
BspACI CCGC 6 cut(s) 207, 209, 375, 472, 735, 777
BspANI GGCC 4 cut(s) 276, 434, 539, 676
BspCNI CTCAG 1 cut(s) 1078
BspEI TCCGGA 1 cut(s) 309
BspFNI CGCG 2 cut(s) 209, 375
BspHI TCATGA 1 cut(s) 45
BspLI GGNNCC 1 cut(s) 983
BspMI ACCTGC 1 cut(s) 880
BspPI GGATC 5 cut(s) 320, 485, 521, 632, 884
BspQI GCTCTTC 2 cut(s) 711, 813
BspT104I TTCGAA 1 cut(s) 387
BsrDI GCAATG 1 cut(s) 699
BsrI ACTGG 7 cut(s) 115, 126, 161, 197, 404, 626, 1105
BssECI CCNNGG 6 cut(s) 207, 260, 425, 540, 1137, 1169
BssMI GATC 5 cut(s) 312, 477, 526, 624, 876
BssSI CACGAG 1 cut(s) 884
BssT1I CCWWGG 3 cut(s) 260, 540, 1169
Bst2BI CACGAG 1 cut(s) 884
Bst2UI CCWGG 4 cut(s) 170, 874, 979, 1138
Bst4CI ACNGT 5 cut(s) 559, 767, 801, 919, 1126
Bst6I CTCTTC 3 cut(s) 326, 711, 813
BstBI TTCGAA 1 cut(s) 387
BstC8I GCNNGC 2 cut(s) 36, 373
BstDEI CTNAG 2 cut(s) 445, 1086
BstDSI CCRYGG 2 cut(s) 207, 425
BstF5I GGATG 2 cut(s) 523, 641
BstFNI CGCG 2 cut(s) 209, 375
BstKTI GATC 5 cut(s) 315, 480, 529, 627, 879
BstMAI GTCTC 2 cut(s) 773, 933
BstMBI GATC 5 cut(s) 312, 477, 526, 624, 876
BstMWI GCNNNNNNNGC 1 cut(s) 1151
BstNI CCWGG 4 cut(s) 170, 874, 979, 1138
BstSCI CCNGG 4 cut(s) 168, 872, 977, 1136
BstSLI GKGCMC 2 cut(s) 129, 591
BstUI CGCG 2 cut(s) 209, 375
BstV1I GCAGC 3 cut(s) 125, 160, 1011
BstV2I GAAGAC 1 cut(s) 231
BstX2I RGATCY 4 cut(s) 312, 526, 624, 876
BstYI RGATCY 4 cut(s) 312, 526, 624, 876
BsuI GTATCC 1 cut(s) 331
BsuRI GGCC 4 cut(s) 276, 434, 539, 676
BtgI CCRYGG 2 cut(s) 207, 425
BtrI CACGTC 2 cut(s) 301, 654
BtsCI GGATG 2 cut(s) 523, 641
BtsIMutI CAGTG 2 cut(s) 555, 1112
BveI ACCTGC 1 cut(s) 880
Cac8I GCNNGC 2 cut(s) 36, 373
CciI TCATGA 1 cut(s) 45
Cfr13I GGNCC 1 cut(s) 981
Cfr42I CCGCGG 1 cut(s) 210
CseI GACGC 1 cut(s) 192
Csp6I GTAC 1 cut(s) 154
CspCI CAANNNNNGTGG 2 cut(s) 792, 827
CviAII CATG 1 cut(s) 46
CviQI GTAC 1 cut(s) 154
DdeI CTNAG 2 cut(s) 445, 1086
DpnI GATC 5 cut(s) 314, 479, 528, 626, 878
DpnII GATC 5 cut(s) 312, 477, 526, 624, 876
EaeI YGGCCR 1 cut(s) 537
Eam1104I CTCTTC 3 cut(s) 326, 711, 813
EarI CTCTTC 3 cut(s) 326, 711, 813
Eco130I CCWWGG 3 cut(s) 260, 540, 1169
Eco47I GGWCC 1 cut(s) 981
EcoO109I RGGNCCY 1 cut(s) 981
EcoRI GAATTC 1 cut(s) 752
EcoRII CCWGG 4 cut(s) 168, 872, 977, 1136
EcoT14I CCWWGG 3 cut(s) 260, 540, 1169
EcoT22I ATGCAT 1 cut(s) 640
ErhI CCWWGG 3 cut(s) 260, 540, 1169
FaeI CATG 1 cut(s) 49
FatI CATG 1 cut(s) 45
FauI CCCGC 1 cut(s) 479
FauNDI CATATG 1 cut(s) 28
Fnu4HI GCNGC 5 cut(s) 139, 174, 376, 777, 1000
FokI GGATG 2 cut(s) 530, 628
Fsp4HI GCNGC 5 cut(s) 139, 174, 376, 777, 1000
FspBI CTAG 3 cut(s) 177, 261, 365
GluI GCNGC 5 cut(s) 139, 174, 376, 777, 1000
GsuI CTGGAG 2 cut(s) 625, 856
HaeIII GGCC 4 cut(s) 276, 434, 539, 676
HapII CCGG 1 cut(s) 310
HgaI GACGC 1 cut(s) 192
Hin1II CATG 1 cut(s) 49
HincII GTYRAC 2 cut(s) 397, 922
HindII GTYRAC 2 cut(s) 397, 922
HinfI GANTC 8 cut(s) 73, 404, 506, 741, 861, 869, 941, 974
HpaI GTTAAC 1 cut(s) 922
HpaII CCGG 1 cut(s) 310
HphI GGTGA 4 cut(s) 172, 424, 736, 907
Hpy166II GTNNAC 7 cut(s) 12, 77, 127, 397, 740, 797, 922
Hpy188I TCNGA 5 cut(s) 290, 646, 658, 860, 868
Hpy188III TCNNGA 5 cut(s) 46, 310, 349, 604, 1061
Hpy8I GTNNAC 7 cut(s) 12, 77, 127, 397, 740, 797, 922
Hpy99I CGWCG 1 cut(s) 662
HpyAV CCTTC 3 cut(s) 266, 445, 581
HpyCH4III ACNGT 5 cut(s) 559, 767, 801, 919, 1126
HpyCH4IV ACGT 3 cut(s) 300, 653, 696
HpyCH4V TGCA 5 cut(s) 54, 127, 246, 269, 638
HpyF10VI GCNNNNNNNGC 1 cut(s) 1151
HpyF3I CTNAG 2 cut(s) 445, 1086
HpySE526I ACGT 3 cut(s) 300, 653, 696
Hsp92II CATG 1 cut(s) 49
Kpn2I TCCGGA 1 cut(s) 309
KspAI GTTAAC 1 cut(s) 922
KspI CCGCGG 1 cut(s) 210
Kzo9I GATC 5 cut(s) 312, 477, 526, 624, 876
LguI GCTCTTC 2 cut(s) 711, 813
LmnI GCTCC 2 cut(s) 245, 368
Lsp1109I GCAGC 3 cut(s) 125, 160, 1011
LweI GCATC 3 cut(s) 125, 625, 647
MaeI CTAG 3 cut(s) 177, 261, 365
MaeII ACGT 3 cut(s) 300, 653, 696
MaeIII GTNAC 5 cut(s) 160, 458, 553, 719, 1090
MalI GATC 5 cut(s) 314, 479, 528, 626, 878
MboI GATC 5 cut(s) 312, 477, 526, 624, 876
MboII GAAGA 5 cut(s) 236, 343, 461, 698, 830
MflI RGATCY 4 cut(s) 312, 526, 624, 876
MhlI GDGCHC 3 cut(s) 129, 373, 591
MlsI TGGCCA 1 cut(s) 539
MluCI AATT 5 cut(s) 599, 752, 853, 1056, 1147
MluNI TGGCCA 1 cut(s) 539
MlyI GAGTC 6 cut(s) 82, 515, 735, 855, 863, 935
MmeI TCCRAC 7 cut(s) 328, 502, 534, 681, 883, 891, 971
MnlI CCTC 5 cut(s) 214, 473, 600, 965, 1081
Mox20I TGGCCA 1 cut(s) 539
Mph1103I ATGCAT 1 cut(s) 640
MroI TCCGGA 1 cut(s) 309
MscI TGGCCA 1 cut(s) 539
MseI TTAA 1 cut(s) 921
MslI CAYNNNNRTG 3 cut(s) 899, 1105, 1171
Msp20I TGGCCA 1 cut(s) 539
MspA1I CMGCKG 2 cut(s) 209, 474
MspI CCGG 1 cut(s) 310
MspR9I CCNGG 4 cut(s) 170, 874, 979, 1138
Mva1269I GAATGC 1 cut(s) 358
MvaI CCWGG 4 cut(s) 170, 874, 979, 1138
MvnI CGCG 2 cut(s) 209, 375
MwoI GCNNNNNNNGC 1 cut(s) 1151
NdeI CATATG 1 cut(s) 28
NdeII GATC 5 cut(s) 312, 477, 526, 624, 876
NlaIII CATG 1 cut(s) 49
NlaIV GGNNCC 1 cut(s) 983
NmuCI GTSAC 2 cut(s) 160, 553
NsiI ATGCAT 1 cut(s) 640
NspV TTCGAA 1 cut(s) 387
OliI CACNNNNGTG 1 cut(s) 1171
PagI TCATGA 1 cut(s) 45
PciSI GCTCTTC 2 cut(s) 711, 813
PcsI WCGNNNNNNNCGW 1 cut(s) 1071
PctI GAATGC 1 cut(s) 358
PfeI GAWTC 2 cut(s) 404, 974
PflFI GACNNNGTC 1 cut(s) 695
PfoI TCCNGGA 2 cut(s) 872, 977
PkrI GCNGC 5 cut(s) 140, 175, 377, 778, 1001
PleI GAGTC 6 cut(s) 81, 514, 735, 855, 863, 935
PpsI GAGTC 6 cut(s) 81, 514, 735, 855, 863, 935
PpuMI RGGWCCY 1 cut(s) 981
Psp5II RGGWCCY 1 cut(s) 981
Psp6I CCWGG 4 cut(s) 168, 872, 977, 1136
PspGI CCWGG 4 cut(s) 168, 872, 977, 1136
PspN4I GGNNCC 1 cut(s) 983
PspPI GGNCC 1 cut(s) 981
PspPPI RGGWCCY 1 cut(s) 981
PsuI RGATCY 4 cut(s) 312, 526, 624, 876
PsyI GACNNNGTC 1 cut(s) 695
RsaI GTAC 1 cut(s) 155
RsaNI GTAC 1 cut(s) 154
RseI CAYNNNNRTG 3 cut(s) 899, 1105, 1171
SacII CCGCGG 1 cut(s) 210
SapI GCTCTTC 2 cut(s) 711, 813
SaqAI TTAA 1 cut(s) 921
SatI GCNGC 5 cut(s) 139, 174, 376, 777, 1000
Sau3AI GATC 5 cut(s) 312, 477, 526, 624, 876
Sau96I GGNCC 1 cut(s) 981
ScaI AGTACT 1 cut(s) 155
SchI GAGTC 6 cut(s) 82, 515, 735, 855, 863, 935
ScrFI CCNGG 4 cut(s) 170, 874, 979, 1138
SduI GDGCHC 3 cut(s) 129, 373, 591
SfaNI GCATC 3 cut(s) 125, 625, 647
Sfr303I CCGCGG 1 cut(s) 210
SfuI TTCGAA 1 cut(s) 387
SgrBI CCGCGG 1 cut(s) 210
SinI GGWCC 1 cut(s) 981
SmiMI CAYNNNNRTG 3 cut(s) 899, 1105, 1171
SmlI CTYRAG 1 cut(s) 956
SmoI CTYRAG 1 cut(s) 956
Sse9I AATT 5 cut(s) 599, 752, 853, 1056, 1147
SsiI CCGC 6 cut(s) 207, 209, 375, 472, 735, 777
SspMI CTAG 3 cut(s) 177, 261, 365
StyD4I CCNGG 4 cut(s) 168, 872, 977, 1136
StyI CCWWGG 3 cut(s) 260, 540, 1169
TaaI ACNGT 5 cut(s) 559, 767, 801, 919, 1126
TaiI ACGT 3 cut(s) 303, 656, 699
TaqI TCGA 6 cut(s) 255, 348, 387, 480, 504, 1074
TasI AATT 5 cut(s) 599, 752, 853, 1056, 1147
TatI WGTACW 1 cut(s) 153
TauI GCSGC 2 cut(s) 378, 779
TfiI GAWTC 2 cut(s) 404, 974
Tru1I TTAA 1 cut(s) 921
Tru9I TTAA 1 cut(s) 921
TscAI CASTG 2 cut(s) 562, 1112
TseFI GTSAC 2 cut(s) 160, 553
TseI GCWGC 3 cut(s) 138, 173, 999
Tsp45I GTSAC 2 cut(s) 160, 553
TspDTI ATGAA 3 cut(s) 34, 62, 996
TspGWI ACGGA 2 cut(s) 307, 1080
TspRI CASTG 2 cut(s) 562, 1112
Tth111I GACNNNGTC 1 cut(s) 695
VneI GTGCAC 1 cut(s) 125
VpaK11BI GGWCC 1 cut(s) 981
XapI RAATTY 2 cut(s) 599, 752
XmaJI CCTAGG 1 cut(s) 260
XspI CTAG 3 cut(s) 177, 261, 365
ZrmI AGTACT 1 cut(s) 155
Zsp2I ATGCAT 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.