Agglutinin domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Agglutinin | PF07468 | 16 - 119 | 8.4e-13 | Agglutinin domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 27 |
| AciI | CCGC | 2 cut(s) | 25, 41 |
| AcoI | YGGCCR | 2 cut(s) | 22, 108 |
| AcuI | CTGAAG | 2 cut(s) | 61, 288 |
| AfaI | GTAC | 4 cut(s) | 115, 132, 191, 244 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 117 |
| AgsI | TTSAA | 1 cut(s) | 445 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 409 |
| AhlI | ACTAGT | 1 cut(s) | 127 |
| AjnI | CCWGG | 1 cut(s) | 19 |
| AluBI | AGCT | 3 cut(s) | 81, 266, 290 |
| AluI | AGCT | 3 cut(s) | 81, 266, 290 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 266 |
| AoxI | GGCC | 4 cut(s) | 22, 31, 108, 438 |
| ApeKI | GCWGC | 2 cut(s) | 276, 373 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 74, 389 |
| AspLEI | GCGC | 1 cut(s) | 146 |
| AspS9I | GGNCC | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 4 cut(s) | 115, 194, 391, 430 |
| AsuII | TTCGAA | 1 cut(s) | 96 |
| AvaII | GGWCC | 1 cut(s) | 223 |
| BauI | CACGAG | 1 cut(s) | 238 |
| BbsI | GAAGAC | 2 cut(s) | 16, 67 |
| BbvI | GCAGC | 2 cut(s) | 288, 385 |
| BccI | CCATC | 1 cut(s) | 266 |
| BceAI | ACGGC | 2 cut(s) | 123, 342 |
| BciT130I | CCWGG | 1 cut(s) | 21 |
| BcuI | ACTAGT | 1 cut(s) | 127 |
| BfaI | CTAG | 1 cut(s) | 128 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 30 |
| BisI | GCNGC | 3 cut(s) | 25, 277, 374 |
| BlsI | GCNGC | 3 cut(s) | 26, 278, 375 |
| BmcAI | AGTACT | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 1 cut(s) | 21 |
| Bme18I | GGWCC | 1 cut(s) | 223 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 409 |
| BmgT120I | GGNCC | 1 cut(s) | 223 |
| BmrFI | CCNGG | 1 cut(s) | 21 |
| BmrI | ACTGGG | 1 cut(s) | 126 |
| BmsI | GCATC | 1 cut(s) | 131 |
| BmuI | ACTGGG | 1 cut(s) | 126 |
| BpiI | GAAGAC | 2 cut(s) | 16, 67 |
| BpmI | CTGGAG | 1 cut(s) | 243 |
| Bpu10I | CCTNAGC | 1 cut(s) | 28 |
| Bpu14I | TTCGAA | 1 cut(s) | 96 |
| BpuEI | CTTGAG | 1 cut(s) | 376 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 57, 87 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 117 |
| Bse1I | ACTGG | 3 cut(s) | 111, 121, 260 |
| BseBI | CCWGG | 1 cut(s) | 21 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BseNI | ACTGG | 3 cut(s) | 111, 121, 260 |
| BseRI | GAGGAG | 1 cut(s) | 233 |
| BseXI | GCAGC | 2 cut(s) | 288, 385 |
| BshFI | GGCC | 4 cut(s) | 24, 33, 110, 440 |
| BslFI | GGGAC | 3 cut(s) | 133, 138, 347 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 117 |
| BsmFI | GGGAC | 3 cut(s) | 133, 138, 347 |
| BsnI | GGCC | 4 cut(s) | 24, 33, 110, 440 |
| Bsp119I | TTCGAA | 1 cut(s) | 96 |
| Bsp1407I | TGTACA | 1 cut(s) | 242 |
| BspACI | CCGC | 2 cut(s) | 25, 41 |
| BspANI | GGCC | 4 cut(s) | 24, 33, 110, 440 |
| BspCNI | CTCAG | 1 cut(s) | 41 |
| BspT104I | TTCGAA | 1 cut(s) | 96 |
| BsrBI | CCGCTC | 1 cut(s) | 27 |
| BsrGI | TGTACA | 1 cut(s) | 242 |
| BsrI | ACTGG | 3 cut(s) | 111, 121, 260 |
| BssSI | CACGAG | 1 cut(s) | 238 |
| Bst2BI | CACGAG | 1 cut(s) | 238 |
| Bst2UI | CCWGG | 1 cut(s) | 21 |
| BstAUI | TGTACA | 1 cut(s) | 242 |
| BstBI | TTCGAA | 1 cut(s) | 96 |
| BstC8I | GCNNGC | 1 cut(s) | 451 |
| BstDEI | CTNAG | 1 cut(s) | 28 |
| BstHHI | GCGC | 1 cut(s) | 146 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 30, 446 |
| BstNI | CCWGG | 1 cut(s) | 21 |
| BstNSI | RCATGY | 2 cut(s) | 17, 437 |
| BstSCI | CCNGG | 1 cut(s) | 19 |
| BstV1I | GCAGC | 2 cut(s) | 288, 385 |
| BstV2I | GAAGAC | 2 cut(s) | 16, 67 |
| BsuRI | GGCC | 4 cut(s) | 24, 33, 110, 440 |
| Cac8I | GCNNGC | 1 cut(s) | 451 |
| CaiI | CAGNNNCTG | 1 cut(s) | 266 |
| CfoI | GCGC | 1 cut(s) | 146 |
| Cfr13I | GGNCC | 1 cut(s) | 223 |
| Csp6I | GTAC | 4 cut(s) | 114, 131, 190, 243 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 417, 452 |
| CviAII | CATG | 5 cut(s) | 14, 302, 330, 377, 434 |
| CviQI | GTAC | 4 cut(s) | 114, 131, 190, 243 |
| DdeI | CTNAG | 1 cut(s) | 28 |
| DriI | GACNNNNNGTC | 1 cut(s) | 409 |
| EaeI | YGGCCR | 2 cut(s) | 22, 108 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 409 |
| Eco32I | GATATC | 1 cut(s) | 397 |
| Eco47I | GGWCC | 1 cut(s) | 223 |
| Eco57I | CTGAAG | 2 cut(s) | 61, 288 |
| EcoRII | CCWGG | 1 cut(s) | 19 |
| EcoRV | GATATC | 1 cut(s) | 397 |
| FaeI | CATG | 5 cut(s) | 17, 305, 333, 380, 437 |
| FaqI | GGGAC | 3 cut(s) | 133, 138, 347 |
| FatI | CATG | 5 cut(s) | 13, 301, 329, 376, 433 |
| FauNDI | CATATG | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 3 cut(s) | 25, 277, 374 |
| Fsp4HI | GCNGC | 3 cut(s) | 25, 277, 374 |
| FspBI | CTAG | 1 cut(s) | 128 |
| GlaI | GCGC | 1 cut(s) | 145 |
| GluI | GCNGC | 3 cut(s) | 25, 277, 374 |
| GsuI | CTGGAG | 1 cut(s) | 243 |
| HaeIII | GGCC | 4 cut(s) | 24, 33, 110, 440 |
| HhaI | GCGC | 1 cut(s) | 146 |
| Hin1II | CATG | 5 cut(s) | 17, 305, 333, 380, 437 |
| Hin6I | GCGC | 1 cut(s) | 144 |
| HinP1I | GCGC | 1 cut(s) | 144 |
| HinfI | GANTC | 2 cut(s) | 37, 410 |
| HphI | GGTGA | 4 cut(s) | 115, 194, 391, 430 |
| Hpy166II | GTNNAC | 3 cut(s) | 190, 243, 245 |
| Hpy188I | TCNGA | 2 cut(s) | 201, 384 |
| Hpy188III | TCNNGA | 1 cut(s) | 355 |
| Hpy8I | GTNNAC | 3 cut(s) | 190, 243, 245 |
| HpyAV | CCTTC | 3 cut(s) | 196, 335, 451 |
| HpyCH4IV | ACGT | 1 cut(s) | 336 |
| HpyCH4V | TGCA | 2 cut(s) | 17, 323 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 30, 446 |
| HpyF3I | CTNAG | 1 cut(s) | 28 |
| HpySE526I | ACGT | 1 cut(s) | 336 |
| Hsp92II | CATG | 5 cut(s) | 17, 305, 333, 380, 437 |
| HspAI | GCGC | 1 cut(s) | 144 |
| Lsp1109I | GCAGC | 2 cut(s) | 288, 385 |
| LweI | GCATC | 1 cut(s) | 131 |
| MaeI | CTAG | 1 cut(s) | 128 |
| MaeII | ACGT | 1 cut(s) | 336 |
| MaeIII | GTNAC | 1 cut(s) | 103 |
| MbiI | CCGCTC | 1 cut(s) | 27 |
| MboII | GAAGA | 4 cut(s) | 21, 67, 281, 382 |
| MluCI | AATT | 1 cut(s) | 174 |
| MlyI | GAGTC | 2 cut(s) | 46, 419 |
| MnlI | CCTC | 4 cut(s) | 172, 211, 214, 267 |
| MroXI | GAANNNNTTC | 2 cut(s) | 74, 389 |
| MspR9I | CCNGG | 1 cut(s) | 21 |
| MvaI | CCWGG | 1 cut(s) | 21 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 30, 446 |
| NdeI | CATATG | 1 cut(s) | 135 |
| NlaIII | CATG | 5 cut(s) | 17, 305, 333, 380, 437 |
| NmuCI | GTSAC | 1 cut(s) | 103 |
| NspI | RCATGY | 2 cut(s) | 17, 437 |
| NspV | TTCGAA | 1 cut(s) | 96 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 399 |
| PdmI | GAANNNNTTC | 2 cut(s) | 74, 389 |
| PkrI | GCNGC | 3 cut(s) | 26, 278, 375 |
| PleI | GAGTC | 2 cut(s) | 45, 418 |
| PpsI | GAGTC | 2 cut(s) | 45, 418 |
| Psp6I | CCWGG | 1 cut(s) | 19 |
| PspGI | CCWGG | 1 cut(s) | 19 |
| PspPI | GGNCC | 1 cut(s) | 223 |
| PstNI | CAGNNNCTG | 1 cut(s) | 266 |
| RsaI | GTAC | 4 cut(s) | 115, 132, 191, 244 |
| RsaNI | GTAC | 4 cut(s) | 114, 131, 190, 243 |
| SatI | GCNGC | 3 cut(s) | 25, 277, 374 |
| Sau96I | GGNCC | 1 cut(s) | 223 |
| ScaI | AGTACT | 1 cut(s) | 115 |
| SchI | GAGTC | 2 cut(s) | 46, 419 |
| ScrFI | CCNGG | 1 cut(s) | 21 |
| SetI | ASST | 8 cut(s) | 22, 83, 195, 268, 292, 339, 462, 468 |
| SfaNI | GCATC | 1 cut(s) | 131 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 30 |
| SfuI | TTCGAA | 1 cut(s) | 96 |
| SinI | GGWCC | 1 cut(s) | 223 |
| SmlI | CTYRAG | 1 cut(s) | 355 |
| SmoI | CTYRAG | 1 cut(s) | 355 |
| SpeI | ACTAGT | 1 cut(s) | 127 |
| Sse9I | AATT | 1 cut(s) | 174 |
| SsiI | CCGC | 2 cut(s) | 25, 41 |
| SspMI | CTAG | 1 cut(s) | 128 |
| StyD4I | CCNGG | 1 cut(s) | 19 |
| TaiI | ACGT | 1 cut(s) | 339 |
| TaqI | TCGA | 3 cut(s) | 7, 96, 393 |
| TasI | AATT | 1 cut(s) | 174 |
| TatI | WGTACW | 3 cut(s) | 113, 130, 242 |
| TauI | GCSGC | 1 cut(s) | 27 |
| TseFI | GTSAC | 1 cut(s) | 103 |
| TseI | GCWGC | 2 cut(s) | 276, 373 |
| Tsp45I | GTSAC | 1 cut(s) | 103 |
| TspDTI | ATGAA | 1 cut(s) | 225 |
| VpaK11BI | GGWCC | 1 cut(s) | 223 |
| XceI | RCATGY | 2 cut(s) | 17, 437 |
| XmnI | GAANNNNTTC | 2 cut(s) | 74, 389 |
| XspI | CTAG | 1 cut(s) | 128 |
| ZrmI | AGTACT | 1 cut(s) | 115 |