AT4G27300

Domain of unknown function (DUF3403)

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
13668676 .. 13672413
3738 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G27300.1

Sequence Viewer

Length: 2448 bp
ATGAGAGAAATTCATTCTCTGTTTTCGTTATCTCTGTTCTTAATTTCATCTTCTCTCTCTGTTGCTTTGGATTATAATGTCATCACTCCAAAAGAATTCCTTAAGGATGGAGATACCCTTAGTTCTCCAGACCAGGTTTTCCAACTTGGGTTCTTTAGTCTTGACCAAGAAGAGCAACCTCAACATCGGTTTCTTGGCTTGTGGTACATGGAACCATTTGCAGTCGTTTGGGTGGCCAACCGAAACAACCCTCTCTACGGCACATCTGGATTCTTAAACTTGAGTTCCCTTGGCGATCTTCAGCTATTCGACGGTGAACACAAAGCCTTGTGGTCATCATCATCATCATCAACAAAAGCTTCTAAAACAGCAAATAATCCTCTCTTGAAGATATCATGTTCAGGGAATCTCATATCTAGTGACGGAGAAGAAGCTGTGTTGTGGCAGAGTTTTGATTATCCCATGAATACAATACTCGCGGGTATGAAGCTTGGGAAAAACTTCAAGACACAAATGGAATGGTCTCTATCATCTTGGAAAACCCTAAAAGATCCATCACCAGGTGATTTCACGTTGTCTCTAGACACTCGAGGTTTACCACAATTGATCTTAAGGAAGAATGGAGATTCGAGTTATTCCTATCGCTTAGGATCTTGGAACGGCTTATCCTTCACCGGCGCTCCAGCTATGGGACGTGAGAATAGCTTATTCGACTACAAATTCACGTCGAGTGCGCAAGAAGTAAACTACTCGTGGACTCCACGGCACAGAATTGTCTCAAGATTGGTATTAAACAACACAGGGAAACTCCATAGGTTTATCCAGTCGAAGCAAAACCAGTGGATCTTAGCAAACACTGCACCAGAAGATGAGTGTGACTACTACTCTATATGTGGAGCTTACGCAGTTTGTGGGATTAATAGCAAAAACACACCTTCTTGTTCATGTTTACAAGGGTTCAAGCCTAAATCAGGTCGAAAGTGGAATATTTCAAGAGGAGCATACGGGTGTGTCCATGAGATTCCAACCAACTGTGAAAAGAAAGATGCATTTGTGAAGTTTCCAGGTCTGAAATTACCAGATACTTCATGGTCTTGGTATGATGCAAAAAATGAAATGACACTTGAGGATTGTAAGATCAAGTGTTCAAGTAACTGCTCTTGCACGGCTTATGCGAATACCGATATTCGCGAGGGAGGAAAAGGTTGTTTGCTTTGGTTTGGTGACTTGGTTGATATGAGAGAGTATTCTAGCTTTGGACAAGATGTTTACATAAGAATGGGTTTTGCTAAAATAGAGTTTAAAGGAAGAGAAGTGGTGGGAATGGTCGTTGGATCGGTGGTGGCAATTGCAGTTGTTTTGGTTGTAGTGTTTGCATGTTTCAGAAAGAAGATAATGAAGAGATATCGAGGTGAAAATTTCAGAAAAGGGATTGAGGAAGAGGACTTGGACTTGCCTATTTTTGACAGAAAAACGATTTCTATAGCCACTGATGATTTTTCATACGTGAACTTCCTAGGAAGAGGAGGTTTTGGACCAGTTTATAAGGGTAAGTTAGAAGATGGACAAGAGATTGCGGTGAAGAGGTTATCCGCGAACTCAGGACAAGGAGTGGAAGAATTCAAGAACGAAGTAAAACTAATCGCAAAACTTCAACATCGTAACCTCGTGAGGCTTTTAGGTTGTTGTATTCAAGGTGAAGAATGTATGTTGATCTATGAGTATATGCCTAACAAAAGTTTAGACTTCTTTATATTTGATGAAAGGAGAAGTACAGAATTGGATTGGAAGAAGAGAATGAACATTATCAATGGAGTAGCTCGTGGGATTCTCTATCTTCATCAAGATTCAAGATTGAGAATCATACATAGAGATTTAAAAGCTGGAAATGTTTTACTAGATAATGATATGAACCCTAAGATCTCAGATTTTGGATTGGCTAAATCTTTTGGGGGAGATCAGAGTGAATCAAGCACAAACAGAGTCGTGGGTACTTATGGTTACATGCCTCCGGAGTATGCAATTGATGGACATTTCTCTGTGAAATCTGATGTGTTCAGTTTCGGTGTATTAGTACTTGAGATCATAACTGGCAAGACGAATCGAGGGTTTCGTCATGCAGATCATGATCTTAATCTTCTTGGACACGTGTGGAAAATGTGGGTTGAAGACAGAGAAATAGAAGTACCAGAGGAAGAGTGGTTGGAAGAGACAAGTGTTATCCCAGAGGTACTAAGATGTATTCATGTTGCTTTGCTTTGTGTTCAACAAAAACCAGAAGACAGACCAACCATGGCTTCTGTTGTCTTGATGTTTGGGAGTGATAGTTCTCTTCCTCACCCTACACAGCCCGGTTTTTTCACCAACCGGAACGTTCCTGATATCTCTTCATCTTTAAGCTTACGTTCACAAAACGAAGTTTCCATCACAATGTTGCAGGGACGGTAG

Protein Analysis

815

Amino Acids

91.87

Weight (kDa)

6.47

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 180 1.8e-28 D-mannose binding lectin
S_locus_glycop PF00954 214 - 324 1.9e-30 S-locus glycoprotein domain
PAN_2 PF08276 345 - 413 5.8e-22 PAN-like domain
Pkinase PF00069 502 - 769 2.2e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 504 - 769 1.3e-49 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 775 - 815 3.8e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 75, 1545
Acc16I TGCGCA 1 cut(s) 735
AccII CGCG 3 cut(s) 479, 1191, 1595
AccIII TCCGGA 1 cut(s) 2011
AciI CCGC 3 cut(s) 479, 1577, 1593
AclI AACGTT 1 cut(s) 2373
AclWI GGATC 4 cut(s) 545, 658, 851, 1342
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 5 cut(s) 9, 95, 719, 1417, 1619
AcuI CTGAAG 1 cut(s) 284
AcvI CACGTG 1 cut(s) 2149
AdeI CACNNNGTG 1 cut(s) 563
AfaI GTAC 6 cut(s) 206, 1774, 1993, 2076, 2187, 2232
AfiI CCNNNNNNNGG 4 cut(s) 257, 560, 689, 971
AflII CTTAAG 2 cut(s) 101, 610
AflIII ACRYGT 2 cut(s) 2146, 2148
AjiI CACGTC 2 cut(s) 695, 726
AjnI CCWGG 3 cut(s) 132, 559, 1063
AjuI GAANNNNNNNTTGG 2 cut(s) 2281, 2313
AloI GAACNNNNNNTCC 4 cut(s) 650, 682, 2311, 2343
Alw26I GTCTC 4 cut(s) 528, 582, 781, 2204
AlwI GGATC 4 cut(s) 545, 658, 851, 1342
Ama87I CYCGRG 1 cut(s) 588
Aor13HI TCCGGA 1 cut(s) 2011
AoxI GGCC 1 cut(s) 234
ApoI RAATTY 5 cut(s) 9, 95, 719, 1417, 1619
AseI ATTAAT 1 cut(s) 918
Asp700I GAANNNNTTC 1 cut(s) 500
AspA2I CCTAGG 1 cut(s) 1516
AspLEI GCGC 2 cut(s) 680, 736
AspS9I GGNCC 1 cut(s) 1535
AsuC2I CCSGG 1 cut(s) 2352
AvaI CYCGRG 1 cut(s) 588
AvaII GGWCC 1 cut(s) 1535
AvrII CCTAGG 1 cut(s) 1516
BalI TGGCCA 1 cut(s) 236
BauI CACGAG 3 cut(s) 751, 1667, 1821
BbrPI CACGTG 1 cut(s) 2149
BbsI GAAGAC 2 cut(s) 2175, 2286
BccI CCATC 5 cut(s) 101, 562, 1556, 2021, 2432
BceAI ACGGC 4 cut(s) 274, 676, 779, 1182
BciT130I CCWGG 3 cut(s) 134, 561, 1065
BcnI CCSGG 1 cut(s) 2352
BcoDI GTCTC 4 cut(s) 528, 582, 781, 2204
BfaI CTAG 5 cut(s) 417, 581, 1251, 1517, 1898
BfmI CTRYAG 1 cut(s) 1482
BfoI RGCGCY 1 cut(s) 681
BfrI CTTAAG 2 cut(s) 101, 610
BglII AGATCT 1 cut(s) 1920
BlnI CCTAGG 1 cut(s) 1516
BmcAI AGTACT 1 cut(s) 2076
Bme1390I CCNGG 4 cut(s) 134, 561, 1065, 2352
Bme18I GGWCC 1 cut(s) 1535
BmeT110I CYCGRG 1 cut(s) 588
BmgBI CACGTC 2 cut(s) 695, 726
BmgT120I GGNCC 1 cut(s) 1535
BmiI GGNNCC 1 cut(s) 213
BmrFI CCNGG 4 cut(s) 134, 561, 1065, 2352
BmsI GCATC 2 cut(s) 1036, 1093
BpiI GAAGAC 2 cut(s) 2175, 2286
BpmI CTGGAG 2 cut(s) 111, 666
Bpu10I CCTNAGC 1 cut(s) 646
BpuEI CTTGAG 4 cut(s) 301, 763, 1145, 2099
BpuMI CCSGG 1 cut(s) 2352
BsaAI YACGTR 2 cut(s) 1507, 2149
BsaBI GATNNNNATC 2 cut(s) 2127, 2133
BsaI GGTCTC 1 cut(s) 528
BsaJI CCNNGG 4 cut(s) 289, 761, 1516, 2292
BsaWI WCCGGW 2 cut(s) 2011, 2367
BsaXI ACNNNNNCTCC 4 cut(s) 664, 694, 2311, 2341
Bsc4I CCNNNNNNNGG 4 cut(s) 257, 560, 689, 971
Bse118I RCCGGY 1 cut(s) 674
Bse1I ACTGG 4 cut(s) 823, 838, 1538, 2095
Bse8I GATNNNNATC 2 cut(s) 2127, 2133
BseAI TCCGGA 1 cut(s) 2011
BseBI CCWGG 3 cut(s) 134, 561, 1065
BseDI CCNNGG 4 cut(s) 289, 761, 1516, 2292
BseGI GGATG 1 cut(s) 112
BseJI GATNNNNATC 2 cut(s) 2127, 2133
BseLI CCNNNNNNNGG 4 cut(s) 257, 560, 689, 971
BseMII CTCAG 2 cut(s) 1614, 1938
BseNI ACTGG 4 cut(s) 823, 838, 1538, 2095
BseRI GAGGAG 2 cut(s) 1011, 1539
BsgI GTGCAG 1 cut(s) 843
Bsh1236I CGCG 3 cut(s) 479, 1191, 1595
BshFI GGCC 1 cut(s) 236
BsiHKCI CYCGRG 1 cut(s) 588
BsiSI CCGG 4 cut(s) 675, 2012, 2352, 2368
BslFI GGGAC 1 cut(s) 705
BslI CCNNNNNNNGG 4 cut(s) 257, 560, 689, 971
BsmAI GTCTC 4 cut(s) 528, 582, 781, 2204
BsmFI GGGAC 1 cut(s) 705
BsnI GGCC 1 cut(s) 236
Bso31I GGTCTC 1 cut(s) 528
BsoBI CYCGRG 1 cut(s) 588
Bsp13I TCCGGA 1 cut(s) 2011
Bsp19I CCATGG 1 cut(s) 2292
Bsp68I TCGCGA 1 cut(s) 1191
BspACI CCGC 3 cut(s) 479, 1577, 1593
BspANI GGCC 1 cut(s) 236
BspCNI CTCAG 2 cut(s) 1613, 1937
BspEI TCCGGA 1 cut(s) 2011
BspFNI CGCG 3 cut(s) 479, 1191, 1595
BspHI TCATGA 1 cut(s) 2125
BspLI GGNNCC 1 cut(s) 213
BspPI GGATC 4 cut(s) 545, 658, 851, 1342
BspQI GCTCTTC 1 cut(s) 165
BspTI CTTAAG 2 cut(s) 101, 610
BspTNI GGTCTC 1 cut(s) 528
BsrFI RCCGGY 1 cut(s) 674
BsrI ACTGG 4 cut(s) 823, 838, 1538, 2095
BssAI RCCGGY 1 cut(s) 674
BssECI CCNNGG 4 cut(s) 289, 761, 1516, 2292
BssSI CACGAG 3 cut(s) 751, 1667, 1821
BssT1I CCWWGG 3 cut(s) 289, 1516, 2292
Bst2BI CACGAG 3 cut(s) 751, 1667, 1821
Bst2UI CCWGG 3 cut(s) 134, 561, 1065
Bst4CI ACNGT 3 cut(s) 314, 1034, 2445
BstAFI CTTAAG 2 cut(s) 101, 610
BstAPI GCANNNNNTGC 1 cut(s) 857
BstBAI YACGTR 2 cut(s) 1507, 2149
BstDEI CTNAG 7 cut(s) 119, 646, 847, 1600, 1917, 1924, 2234
BstDSI CCRYGG 2 cut(s) 761, 2292
BstENI CCTNNNNNAGG 1 cut(s) 969
BstF5I GGATG 1 cut(s) 112
BstFNI CGCG 3 cut(s) 479, 1191, 1595
BstH2I RGCGCY 1 cut(s) 681
BstHHI GCGC 2 cut(s) 680, 736
BstMAI GTCTC 4 cut(s) 528, 582, 781, 2204
BstMWI GCNNNNNNNGC 1 cut(s) 857
BstNI CCWGG 3 cut(s) 134, 561, 1065
BstNSI RCATGY 2 cut(s) 1380, 2008
BstSCI CCNGG 4 cut(s) 132, 559, 1063, 2350
BstSFI CTRYAG 1 cut(s) 1482
BstUI CGCG 3 cut(s) 479, 1191, 1595
BstV2I GAAGAC 2 cut(s) 2175, 2286
BstX2I RGATCY 4 cut(s) 550, 650, 843, 1920
BstYI RGATCY 4 cut(s) 550, 650, 843, 1920
BsuRI GGCC 1 cut(s) 236
BtgI CCRYGG 2 cut(s) 761, 2292
BtrI CACGTC 2 cut(s) 695, 726
BtsCI GGATG 1 cut(s) 112
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 3 cut(s) 845, 855, 1488
BtuMI TCGCGA 1 cut(s) 1191
CciI TCATGA 1 cut(s) 2125
CfoI GCGC 2 cut(s) 680, 736
Cfr10I RCCGGY 1 cut(s) 674
Cfr13I GGNCC 1 cut(s) 1535
CsiI ACCWGGT 2 cut(s) 132, 559
Csp6I GTAC 6 cut(s) 205, 1773, 1992, 2075, 2186, 2231
CspCI CAANNNNNGTGG 2 cut(s) 821, 856
CviQI GTAC 6 cut(s) 205, 1773, 1992, 2075, 2186, 2231
DdeI CTNAG 7 cut(s) 119, 646, 847, 1600, 1917, 1924, 2234
DraI TTTAAA 2 cut(s) 1303, 1878
DraIII CACNNNGTG 1 cut(s) 563
EaeI YGGCCR 1 cut(s) 234
Eco130I CCWWGG 3 cut(s) 289, 1516, 2292
Eco31I GGTCTC 1 cut(s) 528
Eco32I GATATC 3 cut(s) 393, 1406, 2383
Eco47I GGWCC 1 cut(s) 1535
Eco57I CTGAAG 1 cut(s) 284
Eco72I CACGTG 1 cut(s) 2149
Eco88I CYCGRG 1 cut(s) 588
EcoNI CCTNNNNNAGG 1 cut(s) 969
EcoRI GAATTC 2 cut(s) 95, 1619
EcoRII CCWGG 3 cut(s) 132, 559, 1063
EcoRV GATATC 3 cut(s) 393, 1406, 2383
EcoT14I CCWWGG 3 cut(s) 289, 1516, 2292
EcoT22I ATGCAT 1 cut(s) 1051
ErhI CCWWGG 3 cut(s) 289, 1516, 2292
FalI AAGNNNNNCTT 2 cut(s) 84, 116
FaqI GGGAC 1 cut(s) 705
FauI CCCGC 1 cut(s) 472
FokI GGATG 1 cut(s) 119
FspBI CTAG 5 cut(s) 417, 581, 1251, 1517, 1898
FspI TGCGCA 1 cut(s) 735
GlaI GCGC 2 cut(s) 679, 735
GsuI CTGGAG 2 cut(s) 111, 666
HaeII RGCGCY 1 cut(s) 681
HaeIII GGCC 1 cut(s) 236
HapII CCGG 4 cut(s) 675, 2012, 2352, 2368
HhaI GCGC 2 cut(s) 680, 736
Hin6I GCGC 2 cut(s) 678, 734
HinP1I GCGC 2 cut(s) 678, 734
HindIII AAGCTT 3 cut(s) 357, 488, 2398
HpaII CCGG 4 cut(s) 675, 2012, 2352, 2368
Hpy166II GTNNAC 8 cut(s) 317, 596, 745, 756, 950, 1270, 1510, 2408
Hpy188I TCNGA 6 cut(s) 1071, 1385, 1424, 1927, 1962, 2050
Hpy8I GTNNAC 8 cut(s) 317, 596, 745, 756, 950, 1270, 1510, 2408
Hpy99I CGWCG 2 cut(s) 314, 730
HpyAV CCTTC 2 cut(s) 679, 945
HpyCH4III ACNGT 3 cut(s) 314, 1034, 2445
HpyCH4IV ACGT 7 cut(s) 572, 694, 725, 1506, 2148, 2373, 2404
HpyF10VI GCNNNNNNNGC 1 cut(s) 857
HpyF3I CTNAG 7 cut(s) 119, 646, 847, 1600, 1917, 1924, 2234
HpySE526I ACGT 7 cut(s) 572, 694, 725, 1506, 2148, 2373, 2404
HspAI GCGC 2 cut(s) 678, 734
Kpn2I TCCGGA 1 cut(s) 2011
LguI GCTCTTC 1 cut(s) 165
LmnI GCTCC 3 cut(s) 685, 896, 998
LweI GCATC 2 cut(s) 1036, 1093
MabI ACCWGGT 2 cut(s) 132, 559
MaeI CTAG 5 cut(s) 417, 581, 1251, 1517, 1898
MaeII ACGT 7 cut(s) 572, 694, 725, 1506, 2148, 2373, 2404
MaeIII GTNAC 6 cut(s) 419, 875, 1151, 1223, 1661, 2000
MfeI CAATTG 3 cut(s) 602, 1347, 2022
MflI RGATCY 4 cut(s) 550, 650, 843, 1920
MlsI TGGCCA 1 cut(s) 236
MluNI TGGCCA 1 cut(s) 236
MlyI GAGTC 2 cut(s) 751, 1992
MmeI TCCRAC 4 cut(s) 166, 1049, 1312, 2184
Mox20I TGGCCA 1 cut(s) 236
Mph1103I ATGCAT 1 cut(s) 1051
MroI TCCGGA 1 cut(s) 2011
MroXI GAANNNNTTC 1 cut(s) 500
MscI TGGCCA 1 cut(s) 236
MslI CAYNNNNRTG 3 cut(s) 1006, 1277, 2429
Msp20I TGGCCA 1 cut(s) 236
MspCI CTTAAG 2 cut(s) 101, 610
MspI CCGG 4 cut(s) 675, 2012, 2352, 2368
MspR9I CCNGG 4 cut(s) 134, 561, 1065, 2352
MunI CAATTG 3 cut(s) 602, 1347, 2022
MvaI CCWGG 3 cut(s) 134, 561, 1065
MvnI CGCG 3 cut(s) 479, 1191, 1595
MwoI GCNNNNNNNGC 1 cut(s) 857
NciI CCSGG 1 cut(s) 2352
NcoI CCATGG 1 cut(s) 2292
NlaIV GGNNCC 1 cut(s) 213
NmuCI GTSAC 3 cut(s) 419, 875, 1223
NruI TCGCGA 1 cut(s) 1191
NsbI TGCGCA 1 cut(s) 735
NsiI ATGCAT 1 cut(s) 1051
NspI RCATGY 2 cut(s) 1380, 2008
PaeR7I CTCGAG 1 cut(s) 588
PagI TCATGA 1 cut(s) 2125
PciSI GCTCTTC 1 cut(s) 165
PcsI WCGNNNNNNNCGW 2 cut(s) 1172, 2110
PdmI GAANNNNTTC 1 cut(s) 500
PfeI GAWTC 9 cut(s) 270, 406, 626, 1021, 1828, 1847, 1860, 1967, 2101
PleI GAGTC 2 cut(s) 751, 1991
PmaCI CACGTG 1 cut(s) 2149
PmlI CACGTG 1 cut(s) 2149
PpsI GAGTC 2 cut(s) 751, 1991
Ppu21I YACGTR 2 cut(s) 1507, 2149
PshBI ATTAAT 1 cut(s) 918
PsiI TTATAA 2 cut(s) 75, 1545
Psp1406I AACGTT 1 cut(s) 2373
Psp6I CCWGG 3 cut(s) 132, 559, 1063
PspCI CACGTG 1 cut(s) 2149
PspGI CCWGG 3 cut(s) 132, 559, 1063
PspN4I GGNNCC 1 cut(s) 213
PspPI GGNCC 1 cut(s) 1535
PspXI VCTCGAGB 1 cut(s) 588
PsuI RGATCY 4 cut(s) 550, 650, 843, 1920
RruI TCGCGA 1 cut(s) 1191
RsaI GTAC 6 cut(s) 206, 1774, 1993, 2076, 2187, 2232
RsaNI GTAC 6 cut(s) 205, 1773, 1992, 2075, 2186, 2231
RseI CAYNNNNRTG 3 cut(s) 1006, 1277, 2429
SapI GCTCTTC 1 cut(s) 165
Sau96I GGNCC 1 cut(s) 1535
ScaI AGTACT 1 cut(s) 2076
SchI GAGTC 2 cut(s) 751, 1992
ScrFI CCNGG 4 cut(s) 134, 561, 1065, 2352
SexAI ACCWGGT 2 cut(s) 132, 559
SfaNI GCATC 2 cut(s) 1036, 1093
SfcI CTRYAG 1 cut(s) 1482
Sfr274I CTCGAG 1 cut(s) 588
SgrAI CRCCGGYG 1 cut(s) 674
SinI GGWCC 1 cut(s) 1535
SlaI CTCGAG 1 cut(s) 588
SmiMI CAYNNNNRTG 3 cut(s) 1006, 1277, 2429
SmlI CTYRAG 7 cut(s) 101, 280, 588, 610, 778, 1124, 2078
SmoI CTYRAG 7 cut(s) 101, 280, 588, 610, 778, 1124, 2078
SsiI CCGC 3 cut(s) 479, 1577, 1593
SspI AATATT 1 cut(s) 988
SspMI CTAG 5 cut(s) 417, 581, 1251, 1517, 1898
StyD4I CCNGG 4 cut(s) 132, 559, 1063, 2350
StyI CCWWGG 3 cut(s) 289, 1516, 2292
TaaI ACNGT 3 cut(s) 314, 1034, 2445
TaiI ACGT 7 cut(s) 575, 697, 728, 1509, 2151, 2376, 2407
TaqI TCGA 9 cut(s) 309, 589, 629, 711, 728, 827, 976, 1408, 2104
TatI WGTACW 2 cut(s) 1772, 2074
TfiI GAWTC 9 cut(s) 270, 406, 626, 1021, 1828, 1847, 1860, 1967, 2101
TscAI CASTG 3 cut(s) 845, 862, 1495
TseFI GTSAC 3 cut(s) 419, 875, 1223
Tsp45I GTSAC 3 cut(s) 419, 875, 1223
TspGWI ACGGA 1 cut(s) 438
TspRI CASTG 3 cut(s) 845, 862, 1495
Vha464I CTTAAG 2 cut(s) 101, 610
VpaK11BI GGWCC 1 cut(s) 1535
VspI ATTAAT 1 cut(s) 918
XagI CCTNNNNNAGG 1 cut(s) 969
XapI RAATTY 5 cut(s) 9, 95, 719, 1417, 1619
XbaI TCTAGA 1 cut(s) 580
XceI RCATGY 2 cut(s) 1380, 2008
XcmI CCANNNNNNNNNTGG 2 cut(s) 1086, 2196
XhoI CTCGAG 1 cut(s) 588
XmaJI CCTAGG 1 cut(s) 1516
XmnI GAANNNNTTC 1 cut(s) 500
XspI CTAG 5 cut(s) 417, 581, 1251, 1517, 1898
ZrmI AGTACT 1 cut(s) 2076
Zsp2I ATGCAT 1 cut(s) 1051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.