Rmu_sc0014333.1_g000002

divergent subfamily of APPLE domains

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014333.1
OG0000207
Physical Location & Seq
Reverse (-)
9752 .. 13449
3698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014333.1_g000002.1.cds

Sequence Viewer

Length: 2466 bp
atgcaaaccttgaaaaccctttttgtgtgcttgttcttaatttccttcctaagaacctcaaatacactagactctatcactccaactcaatttattaaagatggtcaaactctggtttcagcaggtggaagctatgaactgggattctttagtcctggtaaagtgaaaggcagatacttgggaatatggtacacattttctactgagacagttgtatgggtagcgaacagagaaataccacttaatgattctttaggagttttaaaggtcactgatcagggagttttagtccttctcaatagctcaaatggcactgtatggtcatccaattcatcaagaaccgcagggaatccagtctcacaactcttggattcgggaaatcttgttgtgaaagatggaaatgaaactaatcccgataacttcttgtggcagagttttgattatccttgtgatacacgcctgccagaaatgaagcttggttggaatttagttactggtttagataggtatgtctcatcttggaggagcacagaagatccggctcaaggagagtttttgctacggatggatactcatggtttcccacagatttttattatgaagggagctaaaatactgactagagcagggacatggaatggcgttgaattaactggatatcaaggaaagccaaatccagtagcggtttttgagtttgtgttgactaaggatgaagtctattatgagtacacactcctcaaccggtcaatgtttgcaagatatgtattaaacccatatggcattgcacagtggcttacttggacagaccactcacgtagttggcaacctttcatctcaactcaggcagatcagtgtgaaaactatgcctattgtggtgctaatgctagatgtaatgtcagtaacactcctgtatgtacatgcttgaaagggtttgtaccaaaatctccgaaagattggaactcgacaaattggtctgggggatgtgttcgggagactccattagcttgcagctctacagatggcttctcaaagtacagtaactttaaattgccagacacatcttcttcctggtatgacaagagcatgaccctcaaggagtgccagggattatgtttgggaaactgttcatgttctgcatatgcaaatttagatgtcagggaaggtggaagtggctgcttgctttggtttgggaacctcaatgacattagagaattcacctctgattctcaagacctctttatacggctggctgcatcagacctagatcctatagtgagaaagagcaagtccagcaagaaaaagctagcaggaattctgatcggctcatctgtatttcttgtgggaatgctaatagttgggttcattttgtataaacggaagaggaaactcagaaagcaaggagccagaagaaagctggattgcagaagggaggattaccgtggagaagacagggaagacttggagttgccactatttgacttgaccactattgctaatgccactaatgacttttcaagcagcaacaagctgggtgaaggtggttttggacctgtgtacaagggaacattgattggaggagaggaaattgcagtaaagaggctctcaaaaaattctggacagggattgagagagttcaaaaacgaagttctgctgatagccaaacttcagcatcggaatcttgtaaagcttcttggttgttgcattcaagaagatgaagaaattctagtatatgaatacatgcctaacagaagcttggacttctttatatttgatcaagaaagacagaagttgctcgactggcccacatgcttccatattattgagggaattgctcgagggcttctttatctccatcaagactctagattaagaattatccatagagatatgaaggctagcaatatcttgctggacaatgatatgaacccaaagatttcagacttcggcctggctaaaacatttgggggtgatcaaagtgaagacagtacaaatagagtggtgggaacatatggttatatggctcctgaatatgcagtagatggaactttctcaatgaaatccgatgtatttagctttggagttgtactgctagagatattgagcaggaagaagaacaggggattttgtcatccagatcaccatcttaaccttcttggacatgcatggacactatggactcaaaataatcctctggaactggttgatgtgacgttatgtgattcttgcaacacatccggagtgttgagatgtcttcatgtgggcctgttatgtgtgcaagaagcacctgaagatagaccaagcatgtcatctgtggttctaatgttgggaagtgaaattaagttgcctacgccaaaagagcctggtttttacactggacggaccgttccagttactgaatcaacatcaacgacaagtgacttgtgctcagcaaatagtttcagcacaatgttgttagaatctcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

821

Amino Acids

91.88

Weight (kDa)

6.46

Isoelectric Point (pI)

37.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 113
AasI GACNNNNNNGTC 1 cut(s) 970
Acc36I ACCTGC 1 cut(s) 113
AccIII TCCGGA 1 cut(s) 2234
AciI CCGC 2 cut(s) 342, 683
AclWI GGATC 2 cut(s) 530, 1259
AcsI RAATTY 6 cut(s) 484, 1144, 1211, 1311, 1609, 1719
AcuI CTGAAG 2 cut(s) 1649, 2307
AfaI GTAC 8 cut(s) 191, 728, 916, 936, 1034, 1556, 1987, 2085
AfiI CCNNNNNNNGG 1 cut(s) 545
AgeI ACCGGT 1 cut(s) 741
AgsI TTSAA 6 cut(s) 13, 647, 925, 1515, 1636, 1706
AjnI CCWGG 5 cut(s) 154, 1067, 1101, 1947, 2359
AjuI GAANNNNNNNTTGG 4 cut(s) 459, 491, 1527, 1559
AloI GAACNNNNNNTCC 2 cut(s) 2367, 2399
Alw21I GWGCWC 2 cut(s) 530, 2426
Alw26I GTCTC 4 cut(s) 200, 361, 517, 986
AlwI GGATC 2 cut(s) 530, 1259
AlwNI CAGNNNCTG 1 cut(s) 2393
Ama87I CYCGRG 1 cut(s) 1833
Aor13HI TCCGGA 1 cut(s) 2234
AoxI GGCC 3 cut(s) 1799, 1945, 2260
ApeKI GCWGC 4 cut(s) 1008, 1173, 1250, 1518
ApoI RAATTY 6 cut(s) 484, 1144, 1211, 1311, 1609, 1719
AsiGI ACCGGT 1 cut(s) 741
Asp700I GAANNNNTTC 2 cut(s) 1123, 1719
AspS9I GGNCC 4 cut(s) 1547, 1800, 2260, 2379
AsuHPI GGTGA 4 cut(s) 1207, 1544, 1979, 2129
AsuNHI GCTAGC 2 cut(s) 1303, 1895
AvaI CYCGRG 1 cut(s) 1833
AvaII GGWCC 2 cut(s) 1547, 2379
BbsI GAAGAC 4 cut(s) 1452, 1461, 1986, 2243
Bbv12I GWGCWC 2 cut(s) 530, 2426
BbvI GCAGC 4 cut(s) 1020, 1160, 1237, 1530
BccI CCATC 7 cut(s) 95, 389, 559, 1013, 1860, 2033, 2148
BceAI ACGGC 1 cut(s) 1259
BciT130I CCWGG 5 cut(s) 156, 1069, 1103, 1949, 2361
BciVI GTATCC 1 cut(s) 562
BclI TGATCA 3 cut(s) 274, 1771, 1969
BcoDI GTCTC 4 cut(s) 200, 361, 517, 986
BfmI CTRYAG 2 cut(s) 1014, 1269
BfuAI ACCTGC 1 cut(s) 113
BfuI GTATCC 1 cut(s) 562
BisI GCNGC 4 cut(s) 1009, 1174, 1251, 1519
BlpI GCTNAGC 1 cut(s) 2425
BlsI GCNGC 4 cut(s) 1010, 1175, 1252, 1520
Bme1390I CCNGG 5 cut(s) 156, 1069, 1103, 1949, 2361
Bme18I GGWCC 2 cut(s) 1547, 2379
BmeT110I CYCGRG 1 cut(s) 1833
BmgT120I GGNCC 4 cut(s) 1547, 1800, 2260, 2379
BmiI GGNNCC 3 cut(s) 1193, 1402, 2022
BmrFI CCNGG 5 cut(s) 156, 1069, 1103, 1949, 2361
BmrI ACTGGG 1 cut(s) 149
BmsI GCATC 2 cut(s) 1262, 1678
BmtI GCTAGC 2 cut(s) 1307, 1899
BmuI ACTGGG 1 cut(s) 149
BpiI GAAGAC 4 cut(s) 1452, 1461, 1986, 2243
Bpu1102I GCTNAGC 1 cut(s) 2425
BpuEI CTTGAG 3 cut(s) 528, 1076, 1212
BsaAI YACGTR 1 cut(s) 815
BsaBI GATNNNNATC 1 cut(s) 2139
BsaJI CCNNGG 2 cut(s) 1102, 1438
BsaWI WCCGGW 2 cut(s) 741, 2234
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 1 cut(s) 545
Bse118I RCCGGY 1 cut(s) 741
Bse1I ACTGG 9 cut(s) 144, 353, 499, 658, 677, 1802, 2202, 2377, 2387
Bse3DI GCAATG 1 cut(s) 780
Bse8I GATNNNNATC 1 cut(s) 2139
BseAI TCCGGA 1 cut(s) 2234
BseBI CCWGG 5 cut(s) 156, 1069, 1103, 1949, 2361
BseDI CCNNGG 2 cut(s) 1102, 1438
BseGI GGATG 6 cut(s) 323, 570, 715, 986, 2128, 2231
BseJI GATNNNNATC 1 cut(s) 2139
BseLI CCNNNNNNNGG 1 cut(s) 545
BseMI GCAATG 1 cut(s) 780
BseMII CTCAG 4 cut(s) 195, 854, 1402, 2439
BseNI ACTGG 9 cut(s) 144, 353, 499, 658, 677, 1802, 2202, 2377, 2387
BseRI GAGGAG 3 cut(s) 538, 725, 1590
BseXI GCAGC 4 cut(s) 1020, 1160, 1237, 1530
BseYI CCCAGC 1 cut(s) 1528
BshFI GGCC 3 cut(s) 1801, 1947, 2262
BshTI ACCGGT 1 cut(s) 741
BsiHKAI GWGCWC 2 cut(s) 530, 2426
BsiHKCI CYCGRG 1 cut(s) 1833
BsiSI CCGG 3 cut(s) 539, 742, 2235
BslFI GGGAC 1 cut(s) 643
BslI CCNNNNNNNGG 1 cut(s) 545
BsmAI GTCTC 4 cut(s) 200, 361, 517, 986
BsmFI GGGAC 1 cut(s) 643
BsmI GAATGC 2 cut(s) 1350, 1701
BsnI GGCC 3 cut(s) 1801, 1947, 2262
BsoBI CYCGRG 1 cut(s) 1833
Bsp1286I GDGCHC 2 cut(s) 530, 2426
Bsp13I TCCGGA 1 cut(s) 2234
Bsp1407I TGTACA 2 cut(s) 914, 1554
Bsp143I GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
Bsp1720I GCTNAGC 1 cut(s) 2425
BspACI CCGC 2 cut(s) 342, 683
BspANI GGCC 3 cut(s) 1801, 1947, 2262
BspCNI CTCAG 4 cut(s) 196, 853, 1401, 2438
BspEI TCCGGA 1 cut(s) 2234
BspLI GGNNCC 3 cut(s) 1193, 1402, 2022
BspMI ACCTGC 1 cut(s) 113
BspOI GCTAGC 2 cut(s) 1307, 1899
BspPI GGATC 2 cut(s) 530, 1259
BsrDI GCAATG 1 cut(s) 780
BsrFI RCCGGY 1 cut(s) 741
BsrGI TGTACA 2 cut(s) 914, 1554
BsrI ACTGG 9 cut(s) 144, 353, 499, 658, 677, 1802, 2202, 2377, 2387
BssAI RCCGGY 1 cut(s) 741
BssECI CCNNGG 2 cut(s) 1102, 1438
BssMI GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
Bst2UI CCWGG 5 cut(s) 156, 1069, 1103, 1949, 2361
Bst4CI ACNGT 8 cut(s) 211, 316, 789, 1037, 1124, 1439, 1985, 2383
Bst6I CTCTTC 1 cut(s) 1373
BstAUI TGTACA 2 cut(s) 914, 1554
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 6 cut(s) 461, 1006, 1178, 1248, 1305, 1897
BstDEI CTNAG 6 cut(s) 50, 204, 705, 840, 1388, 2425
BstDSI CCRYGG 1 cut(s) 1438
BstF5I GGATG 6 cut(s) 323, 570, 715, 986, 2128, 2231
BstKTI GATC 8 cut(s) 277, 538, 850, 1267, 1320, 1774, 1972, 2137
BstMAI GTCTC 4 cut(s) 200, 361, 517, 986
BstMBI GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
BstMWI GCNNNNNNNGC 4 cut(s) 309, 1290, 1798, 2356
BstNI CCWGG 5 cut(s) 156, 1069, 1103, 1949, 2361
BstNSI RCATGY 5 cut(s) 921, 1741, 1809, 2162, 2305
BstSCI CCNGG 5 cut(s) 154, 1067, 1101, 1947, 2359
BstSFI CTRYAG 2 cut(s) 1014, 1269
BstV1I GCAGC 4 cut(s) 1020, 1160, 1237, 1530
BstV2I GAAGAC 4 cut(s) 1452, 1461, 1986, 2243
BstX2I RGATCY 2 cut(s) 535, 1264
BstYI RGATCY 2 cut(s) 535, 1264
BsuI GTATCC 1 cut(s) 562
BsuRI GGCC 3 cut(s) 1801, 1947, 2262
BtgI CCRYGG 1 cut(s) 1438
BtsCI GGATG 6 cut(s) 323, 570, 715, 986, 2128, 2231
BtsIMutI CAGTG 5 cut(s) 270, 312, 794, 857, 2370
BveI ACCTGC 1 cut(s) 113
Cac8I GCNNGC 6 cut(s) 461, 1006, 1178, 1248, 1305, 1897
CaiI CAGNNNCTG 1 cut(s) 2393
Cfr10I RCCGGY 1 cut(s) 741
Cfr13I GGNCC 4 cut(s) 1547, 1800, 2260, 2379
CpoI CGGWCCG 1 cut(s) 2379
Csp6I GTAC 8 cut(s) 190, 727, 915, 935, 1033, 1555, 1986, 2084
CspAI ACCGGT 1 cut(s) 741
CspCI CAANNNNNGTGG 2 cut(s) 1977, 2012
CspI CGGWCCG 1 cut(s) 2379
CviQI GTAC 8 cut(s) 190, 727, 915, 935, 1033, 1555, 1986, 2084
DdeI CTNAG 6 cut(s) 50, 204, 705, 840, 1388, 2425
DpnI GATC 8 cut(s) 276, 537, 849, 1266, 1319, 1773, 1971, 2136
DpnII GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
DraI TTTAAA 2 cut(s) 264, 1045
DrdI GACNNNNNNGTC 1 cut(s) 970
DseDI GACNNNNNNGTC 1 cut(s) 970
Eam1104I CTCTTC 1 cut(s) 1373
EarI CTCTTC 1 cut(s) 1373
Eco32I GATATC 1 cut(s) 659
Eco47I GGWCC 2 cut(s) 1547, 2379
Eco57I CTGAAG 2 cut(s) 1649, 2307
Eco88I CYCGRG 1 cut(s) 1833
EcoRI GAATTC 2 cut(s) 1211, 1311
EcoRII CCWGG 5 cut(s) 154, 1067, 1101, 1947, 2359
EcoRV GATATC 1 cut(s) 659
EcoT22I ATGCAT 1 cut(s) 2164
FaqI GGGAC 1 cut(s) 643
FauNDI CATATG 3 cut(s) 775, 1138, 2008
FbaI TGATCA 3 cut(s) 274, 1771, 1969
Fnu4HI GCNGC 4 cut(s) 1009, 1174, 1251, 1519
FokI GGATG 6 cut(s) 310, 577, 722, 993, 2115, 2218
Fsp4HI GCNGC 4 cut(s) 1009, 1174, 1251, 1519
GluI GCNGC 4 cut(s) 1009, 1174, 1251, 1519
GsaI CCCAGC 1 cut(s) 1532
HaeIII GGCC 3 cut(s) 1801, 1947, 2262
HapII CCGG 3 cut(s) 539, 742, 2235
HincII GTYRAC 1 cut(s) 702
HindII GTYRAC 1 cut(s) 702
HindIII AAGCTT 3 cut(s) 473, 1685, 1750
HpaII CCGG 3 cut(s) 539, 742, 2235
HphI GGTGA 4 cut(s) 1207, 1544, 1979, 2129
Hpy166II GTNNAC 4 cut(s) 192, 702, 729, 1555
Hpy188I TCNGA 8 cut(s) 948, 1222, 1258, 1317, 1391, 1674, 1939, 2062
Hpy8I GTNNAC 4 cut(s) 192, 702, 729, 1555
HpyAV CCTTC 8 cut(s) 55, 302, 595, 1154, 1419, 1529, 1885, 2159
HpyCH4III ACNGT 8 cut(s) 211, 316, 789, 1037, 1124, 1439, 1985, 2383
HpyCH4IV ACGT 2 cut(s) 814, 2210
HpyF10VI GCNNNNNNNGC 4 cut(s) 309, 1290, 1798, 2356
HpyF3I CTNAG 6 cut(s) 50, 204, 705, 840, 1388, 2425
HpySE526I ACGT 2 cut(s) 814, 2210
Kpn2I TCCGGA 1 cut(s) 2234
Ksp22I TGATCA 3 cut(s) 274, 1771, 1969
Kzo9I GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
LmnI GCTCC 4 cut(s) 525, 605, 1400, 2026
Lsp1109I GCAGC 4 cut(s) 1020, 1160, 1237, 1530
LweI GCATC 2 cut(s) 1262, 1678
MaeII ACGT 2 cut(s) 814, 2210
MaeIII GTNAC 7 cut(s) 268, 490, 899, 1037, 2206, 2389, 2414
MalI GATC 8 cut(s) 276, 537, 849, 1266, 1319, 1773, 1971, 2136
MboI GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
MflI RGATCY 2 cut(s) 535, 1264
MhlI GDGCHC 2 cut(s) 530, 2426
MlyI GAGTC 4 cut(s) 65, 988, 1853, 2170
MmeI TCCRAC 2 cut(s) 107, 461
Mph1103I ATGCAT 1 cut(s) 2164
MroI TCCGGA 1 cut(s) 2234
MroXI GAANNNNTTC 2 cut(s) 1123, 1719
MspI CCGG 3 cut(s) 539, 742, 2235
MspR9I CCNGG 5 cut(s) 156, 1069, 1103, 1949, 2361
Mva1269I GAATGC 2 cut(s) 1350, 1701
MvaI CCWGG 5 cut(s) 156, 1069, 1103, 1949, 2361
MwoI GCNNNNNNNGC 4 cut(s) 309, 1290, 1798, 2356
NdeI CATATG 3 cut(s) 775, 1138, 2008
NdeII GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
NheI GCTAGC 2 cut(s) 1303, 1895
NlaIV GGNNCC 3 cut(s) 1193, 1402, 2022
NmuCI GTSAC 3 cut(s) 268, 2206, 2414
NsiI ATGCAT 1 cut(s) 2164
NspI RCATGY 5 cut(s) 921, 1741, 1809, 2162, 2305
PaeR7I CTCGAG 1 cut(s) 1833
PaqCI CACCTGC 1 cut(s) 113
PctI GAATGC 2 cut(s) 1350, 1701
PdmI GAANNNNTTC 2 cut(s) 1123, 1719
PfeI GAWTC 9 cut(s) 144, 248, 349, 371, 1223, 1675, 2219, 2396, 2456
PinAI ACCGGT 1 cut(s) 741
PkrI GCNGC 4 cut(s) 1010, 1175, 1252, 1520
PleI GAGTC 4 cut(s) 65, 988, 1853, 2170
PpsI GAGTC 4 cut(s) 65, 988, 1853, 2170
Ppu21I YACGTR 1 cut(s) 815
Psp6I CCWGG 5 cut(s) 154, 1067, 1101, 1947, 2359
PspFI CCCAGC 1 cut(s) 1528
PspGI CCWGG 5 cut(s) 154, 1067, 1101, 1947, 2359
PspN4I GGNNCC 3 cut(s) 1193, 1402, 2022
PspPI GGNCC 4 cut(s) 1547, 1800, 2260, 2379
PspXI VCTCGAGB 1 cut(s) 1833
PsrI GAACNNNNNNTAC 2 cut(s) 46, 78
PstNI CAGNNNCTG 1 cut(s) 2393
PsuI RGATCY 2 cut(s) 535, 1264
RsaI GTAC 8 cut(s) 191, 728, 916, 936, 1034, 1556, 1987, 2085
RsaNI GTAC 8 cut(s) 190, 727, 915, 935, 1033, 1555, 1986, 2084
Rsr2I CGGWCCG 1 cut(s) 2379
RsrII CGGWCCG 1 cut(s) 2379
SatI GCNGC 4 cut(s) 1009, 1174, 1251, 1519
Sau3AI GATC 8 cut(s) 274, 535, 847, 1264, 1317, 1771, 1969, 2134
Sau96I GGNCC 4 cut(s) 1547, 1800, 2260, 2379
SchI GAGTC 4 cut(s) 65, 988, 1853, 2170
ScrFI CCNGG 5 cut(s) 156, 1069, 1103, 1949, 2361
SduI GDGCHC 2 cut(s) 530, 2426
SfaNI GCATC 2 cut(s) 1262, 1678
SfcI CTRYAG 2 cut(s) 1014, 1269
Sfr274I CTCGAG 1 cut(s) 1833
SinI GGWCC 2 cut(s) 1547, 2379
SlaI CTCGAG 1 cut(s) 1833
SmlI CTYRAG 4 cut(s) 543, 1091, 1227, 1833
SmoI CTYRAG 4 cut(s) 543, 1091, 1227, 1833
SsiI CCGC 2 cut(s) 342, 683
StyD4I CCNGG 5 cut(s) 154, 1067, 1101, 1947, 2359
TaaI ACNGT 8 cut(s) 211, 316, 789, 1037, 1124, 1439, 1985, 2383
TaiI ACGT 2 cut(s) 817, 2213
TaqI TCGA 3 cut(s) 962, 1794, 1834
TatI WGTACW 6 cut(s) 726, 914, 1032, 1554, 1985, 2083
TfiI GAWTC 9 cut(s) 144, 248, 349, 371, 1223, 1675, 2219, 2396, 2456
TscAI CASTG 5 cut(s) 277, 319, 794, 857, 2377
TseFI GTSAC 3 cut(s) 268, 2206, 2414
TseI GCWGC 4 cut(s) 1008, 1173, 1250, 1518
Tsp45I GTSAC 3 cut(s) 268, 2206, 2414
TspGWI ACGGA 3 cut(s) 577, 1390, 2392
TspRI CASTG 5 cut(s) 277, 319, 794, 857, 2377
VpaK11BI GGWCC 2 cut(s) 1547, 2379
XapI RAATTY 6 cut(s) 484, 1144, 1211, 1311, 1609, 1719
XbaI TCTAGA 1 cut(s) 1862
XceI RCATGY 5 cut(s) 921, 1741, 1809, 2162, 2305
XcmI CCANNNNNNNNNTGG 1 cut(s) 1411
XhoI CTCGAG 1 cut(s) 1833
XmnI GAANNNNTTC 2 cut(s) 1123, 1719
Zsp2I ATGCAT 1 cut(s) 2164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.