RchiOBHm_Chr5g0036741

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000207
Physical Location & Seq
Forward (+)
31006770 .. 31010282
3513 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31554

Sequence Viewer

Length: 2439 bp
ATGAAGAACCTCTGCTTCATTCTTCTCTGCATCTGTTTCAGCAAACTTTCATCTGCAGCTGATACCCTTTCTTCATCTCAGAACATCACTGATGGCAACTCCTTGGTTTCCCCAGGTGGAGTATTTCAACTGGGTTTCTTCAGCCCAGGCAGTTCCAAATCCCGCTACTTGGGGATTTGGTACAAGAACATCCCAGTCCAAACGGTCGTTTGGGTTGCGAATCGAGGCACCCCGATCAACGACTCCTCAGGCCATTTGATGATCAACACCACCACAGGGGCTCTAGTTCTTCTCAACAACAACAAGACCGTTTTTTGGTCATCAAATTCGACGAAACAAACCCAGAATATTAGTCCTGTCGTTCAGTTACTAGACAATGGCAATCTTATTCTCAGAGACGAGAAAGAAGGAGCAAACTCCGAAAGCTATCTGTGGCAAAGCTTCGACTATCCGTCGGATACTTTGTTACCGGGGATGAAGCTGGGATGGGACTTGAGAACCGGGCTGAACCGGAGACTGACGGCGTGGAAGAGTCCAGATGACCCTTCTCCTGGAGACTTCATATGGGAGATGCAGCTGCATAACTATCCTGAGCCAGCTATGTTCAGAGCGGGCAAAGAGTTTTTGAGGAGTGGTCCGTGGAATGGTGTTTTATTCAGTGGAAAACCGGCAAAGGCGCTACCGGCGTTGAACTTCAGCTTCTTCATGGATGAGAATGAGGTTTACACAACAATTGGAATGGTGGACAAGTCAGCATTAGGGAGGATGATGCTGAATTTAACTGCAGATTACTACCGCCAGTCGTGGATTTGGTCTGAAGCAGACCGAAATTGGACACTCTATGCAGCATTTCCTAGGGATCCTTGTGACAGTTATGCCAAGTGTGGAGGAAATGGAAACTGTATGCTTAGTGCATCCCCGATGTGTCAATGTTTAGACAGGTTCAGGCCTAGATCAATGGAGAAGTGGAGCTTAAACAATTTTTCGCTCGGGTGTGAGCGAAAGACGCCATTGAGGTGCAAGAATGATGGATTTGTGACTTATACTGGGTTAAAATTGCCCGATACAACGCATACTTGGATCGATAAAGCTATGAATCTCAAGGAGTGCAGGGCCAAATGCTTGTCTAATTGTTCTTGTTCCGCGTACACAAACTTGGATGTCAGAGGAGGAGGTAGTGGTTGTGCAATCTGGTTTGATGATCTTGTAGACTTGAAGCAGATTCCGGGTGGTGACCAGGATATTTACATTAAGATCTCTGCTGCAGAACTAGGAGGGAAAGATAAGAAGTGGAAGATAGGAGTGATAGTTGCATCTGCCGTTGCTGTAATTCTTGCGATGTTCTTATTTGTCTATTGTTACATTCTCAGACTCAGACGCAGGAAAAGTTTCAAAGGTACTCAAAACAACATTGAAGAGCAGAAGGATGAAGACCTGGAGCTGCCATTGTTCGACTTGCCAACAATAGAGGCTGCTACCAATAAATTCTCAATCAATAATAAACTTGGAGAAGGTGGTTTTGGACCTGTGTACAAGGGTACACTAATAGATGGAAAAGAAATTGCAGTGAAGCGGCTCTCAAGAAGTTCTGGACAAGGAATGAAAGAGTTCAAAAATGAAGTAATACTGATTGCAAAACTTCAGCACCGCAATCTTGTAAAGCTTCTTGGTTGTTGTATTCAGGGAGAGGAGAAATTGCTGATCTATGAATACATGCCCAACAAAAGTTTAGATTCCTTCATTTTTGATGAAATGCGAAGAAAATTGTTAGATTGGCCTAAGCGCTTCCATATTATTTGCGGAATTGCTAGGGGGCTTCTCTATCTTCATCAGGACTCCAGGCTGAGGATTATACACAGAGATCTAAAAGCAAGCAATGTCTTGCTTGATCGTGAGATGAACCCCAAAATCTCAGATTTTGGTCTTGCTAGAACTTTTGGTGGTGACCAAACTGAAGGAAACACAAACAGAGTAGTTGGAACATATGGTTACATGGCCCCTGAATATGCTGTTGAAGGGCAGTTCTCAGTAAAATCCGATGTCTTTAGCTTTGGTATTTTACTGCTGGAGCTAATAAGTGGAAAGAAAAGTAAAGGGTTCTATCACTTGAACCACGACCAGAATCTTATTGGAAATGCATGGAGGTTATGGAACGGAGGGCGGCCATTAGAACTGATAGATGAAGGGTTTGGGGAGTCCTGCAACTTAACGGAGGTGTTGCGATGCATCCATGTCAGTCTCTTGTGTGTACAACAACAGCCTGACGACAGGCCGACCATGTCATCTGTAGTTCAGATGTTATGTAGTGAAAGTGCCTTGCCTCAGCCTAAAGAACCAGGATTCTTTTCAGAGAAAGATTTGGTTGGAGGAGGCTTTCCCTTTCTTAACAACGAAGCGTCTTATAATGGATTAACCATTTCCCTACTCGAGGCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

812

Amino Acids

91.02

Weight (kDa)

8.28

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 68 - 177 1.5e-37 D-mannose binding lectin
S_locus_glycop PF00954 210 - 318 3.3e-21 S-locus glycoprotein domain
PAN_2 PF08276 340 - 405 5.5e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 497 - 767 9.7e-50 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 497 - 765 1.1e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2403
AccB1I GGYRCC 1 cut(s) 227
AccBSI CCGCTC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 1209
AccII CGCG 1 cut(s) 1145
AciI CCGC 8 cut(s) 163, 611, 796, 1143, 1573, 1648, 1800, 2161
AclWI GGATC 3 cut(s) 854, 867, 1088
AcoI YGGCCR 1 cut(s) 2162
AcsI RAATTY 3 cut(s) 325, 775, 1484
AcuI CTGAAG 5 cut(s) 124, 679, 837, 1625, 1974
AcyI GRCGYC 1 cut(s) 1007
AfaI GTAC 6 cut(s) 182, 1148, 1399, 1532, 1540, 2250
AfeI AGCGCT 1 cut(s) 1784
AfiI CCNNNNNNNGG 7 cut(s) 169, 276, 315, 551, 644, 1845, 2428
AgsI TTSAA 8 cut(s) 128, 691, 1216, 1393, 1415, 1612, 2015, 2110
AhdI GACNNNNNGTC 1 cut(s) 451
AjnI CCWGG 7 cut(s) 112, 145, 550, 1236, 1434, 1838, 2335
AjuI GAANNNNNNNTTGG 2 cut(s) 1503, 1535
Alw26I GTCTC 4 cut(s) 390, 508, 549, 2243
AlwI GGATC 3 cut(s) 854, 867, 1088
Ama87I CYCGRG 2 cut(s) 989, 2426
Aor51HI AGCGCT 1 cut(s) 1784
AoxI GGCC 7 cut(s) 250, 947, 1113, 1775, 1995, 2162, 2270
ApeKI GCWGC 7 cut(s) 56, 574, 577, 845, 1262, 1441, 1472
ApoI RAATTY 3 cut(s) 325, 775, 1484
Asp700I GAANNNNTTC 2 cut(s) 1388, 1607
AspA2I CCTAGG 1 cut(s) 854
AspLEI GCGC 2 cut(s) 679, 1785
AspS9I GGNCC 4 cut(s) 635, 1113, 1523, 1996
AsuC2I CCSGG 3 cut(s) 471, 502, 1227
AsuHPI GGTGA 2 cut(s) 1244, 1955
AvaI CYCGRG 2 cut(s) 989, 2426
AvaII GGWCC 2 cut(s) 635, 1523
AvrII CCTAGG 1 cut(s) 854
AxyI CCTNAGG 1 cut(s) 247
BamHI GGATCC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 283
BbsI GAAGAC 1 cut(s) 1437
BbvCI CCTCAGC 2 cut(s) 1844, 2322
BbvI GCAGC 7 cut(s) 68, 564, 586, 857, 1249, 1428, 1459
BccI CCATC 4 cut(s) 86, 480, 1022, 1544
BceAI ACGGC 2 cut(s) 537, 1304
BciT130I CCWGG 7 cut(s) 114, 147, 552, 1238, 1436, 1840, 2337
BciVI GTATCC 1 cut(s) 451
BclI TGATCA 1 cut(s) 261
BcnI CCSGG 3 cut(s) 471, 502, 1227
BcoDI GTCTC 4 cut(s) 390, 508, 549, 2243
BfaI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1809, 1929
BfmI CTRYAG 4 cut(s) 54, 783, 1263, 2286
BfoI RGCGCY 2 cut(s) 680, 1786
BfuI GTATCC 1 cut(s) 451
BglII AGATCT 2 cut(s) 1254, 1861
BisI GCNGC 9 cut(s) 57, 575, 578, 846, 1263, 1442, 1473, 1574, 2162
BlnI CCTAGG 1 cut(s) 854
BlsI GCNGC 9 cut(s) 58, 576, 579, 847, 1264, 1443, 1474, 1575, 2163
Bme18I GGWCC 2 cut(s) 635, 1523
BmeRI GACNNNNNGTC 1 cut(s) 451
BmeT110I CYCGRG 2 cut(s) 989, 2426
BmgT120I GGNCC 4 cut(s) 635, 1113, 1523, 1996
BmiI GGNNCC 3 cut(s) 229, 861, 1998
BmrI ACTGGG 3 cut(s) 140, 188, 1056
BmsI GCATC 7 cut(s) 39, 561, 759, 923, 1322, 2213, 2235
BmuI ACTGGG 3 cut(s) 140, 188, 1056
BpiI GAAGAC 1 cut(s) 1437
BpmI CTGGAG 4 cut(s) 573, 1457, 1822, 2087
Bpu10I CCTNAGC 4 cut(s) 591, 1779, 1844, 2322
BpuEI CTTGAG 3 cut(s) 514, 1085, 1564
BpuMI CCSGG 3 cut(s) 471, 502, 1227
Bsa29I ATCGAT 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 1007
BsaJI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BsaWI WCCGGW 1 cut(s) 510
BsaXI ACNNNNNCTCC 2 cut(s) 1293, 1323
Bsc4I CCNNNNNNNGG 7 cut(s) 169, 276, 315, 551, 644, 1845, 2428
Bse118I RCCGGY 2 cut(s) 667, 682
Bse1I ACTGG 4 cut(s) 135, 194, 799, 1051
Bse21I CCTNAGG 1 cut(s) 247
Bse3DI GCAATG 1 cut(s) 1882
BseBI CCWGG 7 cut(s) 114, 147, 552, 1238, 1436, 1840, 2337
BseCI ATCGAT 1 cut(s) 1083
BseDI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BseGI GGATG 9 cut(s) 189, 480, 491, 715, 771, 914, 1165, 1432, 2226
BseLI CCNNNNNNNGG 7 cut(s) 169, 276, 315, 551, 644, 1845, 2428
BseMI GCAATG 1 cut(s) 1882
BseNI ACTGG 4 cut(s) 135, 194, 799, 1051
BseRI GAGGAG 6 cut(s) 235, 643, 1182, 1185, 1703, 2382
BseXI GCAGC 7 cut(s) 68, 564, 586, 857, 1249, 1428, 1459
BseYI CCCAGC 1 cut(s) 481
BsgI GTGCAG 1 cut(s) 1129
Bsh1236I CGCG 1 cut(s) 1145
Bsh1285I CGRYCG 1 cut(s) 207
BshFI GGCC 7 cut(s) 252, 949, 1115, 1777, 1997, 2164, 2272
BshNI GGYRCC 1 cut(s) 227
BshVI ATCGAT 1 cut(s) 1083
BsiEI CGRYCG 1 cut(s) 207
BsiHKCI CYCGRG 2 cut(s) 989, 2426
BsiSI CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
BslFI GGGAC 1 cut(s) 503
BslI CCNNNNNNNGG 7 cut(s) 169, 276, 315, 551, 644, 1845, 2428
BsmAI GTCTC 4 cut(s) 390, 508, 549, 2243
BsmBI CGTCTC 1 cut(s) 390
BsmFI GGGAC 1 cut(s) 503
BsnI GGCC 7 cut(s) 252, 949, 1115, 1777, 1997, 2164, 2272
BsoBI CYCGRG 2 cut(s) 989, 2426
Bsp1286I GDGCHC 1 cut(s) 283
Bsp1407I TGTACA 2 cut(s) 1530, 2248
BspACI CCGC 8 cut(s) 163, 611, 796, 1143, 1573, 1648, 1800, 2161
BspANI GGCC 7 cut(s) 252, 949, 1115, 1777, 1997, 2164, 2272
BspDI ATCGAT 1 cut(s) 1083
BspFNI CGCG 1 cut(s) 1145
BspLI GGNNCC 3 cut(s) 229, 861, 1998
BspMAI CTGCAG 3 cut(s) 58, 787, 1267
BspPI GGATC 3 cut(s) 854, 867, 1088
BspQI GCTCTTC 1 cut(s) 1410
BspT107I GGYRCC 1 cut(s) 227
BsrBI CCGCTC 1 cut(s) 611
BsrDI GCAATG 1 cut(s) 1882
BsrFI RCCGGY 2 cut(s) 667, 682
BsrGI TGTACA 2 cut(s) 1530, 2248
BsrI ACTGG 4 cut(s) 135, 194, 799, 1051
BssAI RCCGGY 2 cut(s) 667, 682
BssECI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BssNI GRCGYC 1 cut(s) 1007
BssT1I CCWWGG 2 cut(s) 102, 854
Bst2UI CCWGG 7 cut(s) 114, 147, 552, 1238, 1436, 1840, 2337
Bst4CI ACNGT 4 cut(s) 205, 310, 872, 902
Bst6I CTCTTC 2 cut(s) 524, 1410
BstACI GRCGYC 1 cut(s) 1007
BstAUI TGTACA 2 cut(s) 1530, 2248
BstC8I GCNNGC 3 cut(s) 597, 613, 1873
BstDSI CCRYGG 1 cut(s) 638
BstEII GGTNACC 2 cut(s) 1232, 1943
BstENI CCTNNNNNAGG 1 cut(s) 2426
BstF5I GGATG 9 cut(s) 189, 480, 491, 715, 771, 914, 1165, 1432, 2226
BstFNI CGCG 1 cut(s) 1145
BstH2I RGCGCY 2 cut(s) 680, 1786
BstHHI GCGC 2 cut(s) 679, 1785
BstMAI GTCTC 4 cut(s) 390, 508, 549, 2243
BstMCI CGRYCG 1 cut(s) 207
BstMWI GCNNNNNNNGC 2 cut(s) 683, 1006
BstNI CCWGG 7 cut(s) 114, 147, 552, 1238, 1436, 1840, 2337
BstNSI RCATGY 1 cut(s) 1717
BstPI GGTNACC 2 cut(s) 1232, 1943
BstSFI CTRYAG 4 cut(s) 54, 783, 1263, 2286
BstUI CGCG 1 cut(s) 1145
BstV1I GCAGC 7 cut(s) 68, 564, 586, 857, 1249, 1428, 1459
BstV2I GAAGAC 1 cut(s) 1437
BstX2I RGATCY 3 cut(s) 859, 1254, 1861
BstYI RGATCY 3 cut(s) 859, 1254, 1861
Bsu15I ATCGAT 1 cut(s) 1083
Bsu36I CCTNAGG 1 cut(s) 247
BsuI GTATCC 1 cut(s) 451
BsuRI GGCC 7 cut(s) 252, 949, 1115, 1777, 1997, 2164, 2272
BsuTUI ATCGAT 1 cut(s) 1083
BtgI CCRYGG 1 cut(s) 638
BtgZI GCGATG 2 cut(s) 1352, 2236
BtsCI GGATG 9 cut(s) 189, 480, 491, 715, 771, 914, 1165, 1432, 2226
BtsI GCAGTG 1 cut(s) 1572
BtsIMutI CAGTG 3 cut(s) 87, 664, 1572
Cac8I GCNNGC 3 cut(s) 597, 613, 1873
CfoI GCGC 2 cut(s) 679, 1785
Cfr10I RCCGGY 2 cut(s) 667, 682
Cfr13I GGNCC 4 cut(s) 635, 1113, 1523, 1996
ClaI ATCGAT 1 cut(s) 1083
CseI GACGC 3 cut(s) 1015, 1386, 2385
Csp6I GTAC 6 cut(s) 181, 1147, 1398, 1531, 1539, 2249
CviAII CATG 6 cut(s) 706, 1714, 1993, 2139, 2231, 2278
CviQI GTAC 6 cut(s) 181, 1147, 1398, 1531, 1539, 2249
DriI GACNNNNNGTC 1 cut(s) 451
EaeI YGGCCR 1 cut(s) 2162
Eam1104I CTCTTC 2 cut(s) 524, 1410
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 2 cut(s) 524, 1410
Eco130I CCWWGG 2 cut(s) 102, 854
Eco147I AGGCCT 1 cut(s) 949
Eco24I GRGCYC 1 cut(s) 283
Eco47I GGWCC 2 cut(s) 635, 1523
Eco47III AGCGCT 1 cut(s) 1784
Eco57I CTGAAG 5 cut(s) 124, 679, 837, 1625, 1974
Eco81I CCTNAGG 1 cut(s) 247
Eco88I CYCGRG 2 cut(s) 989, 2426
Eco91I GGTNACC 2 cut(s) 1232, 1943
EcoNI CCTNNNNNAGG 1 cut(s) 2426
EcoO65I GGTNACC 2 cut(s) 1232, 1943
EcoRII CCWGG 7 cut(s) 112, 145, 550, 1236, 1434, 1838, 2335
EcoT14I CCWWGG 2 cut(s) 102, 854
EcoT22I ATGCAT 2 cut(s) 2140, 2228
EcoT38I GRGCYC 1 cut(s) 283
ErhI CCWWGG 2 cut(s) 102, 854
Esp3I CGTCTC 1 cut(s) 390
FaeI CATG 6 cut(s) 709, 1717, 1996, 2142, 2234, 2281
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 1 cut(s) 503
FatI CATG 6 cut(s) 705, 1713, 1992, 2138, 2230, 2277
FauI CCCGC 2 cut(s) 170, 604
FauNDI CATATG 2 cut(s) 563, 1984
FbaI TGATCA 1 cut(s) 261
FblI GTMKAC 1 cut(s) 1209
Fnu4HI GCNGC 9 cut(s) 57, 575, 578, 846, 1263, 1442, 1473, 1574, 2162
FokI GGATG 9 cut(s) 176, 487, 498, 722, 778, 901, 1172, 1439, 2213
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 9 cut(s) 57, 575, 578, 846, 1263, 1442, 1473, 1574, 2162
FspBI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1809, 1929
GlaI GCGC 2 cut(s) 678, 1784
GluI GCNGC 9 cut(s) 57, 575, 578, 846, 1263, 1442, 1473, 1574, 2162
GsaI CCCAGC 1 cut(s) 485
GsuI CTGGAG 4 cut(s) 573, 1457, 1822, 2087
HaeII RGCGCY 2 cut(s) 680, 1786
HaeIII GGCC 7 cut(s) 252, 949, 1115, 1777, 1997, 2164, 2272
HapII CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
HgaI GACGC 3 cut(s) 1015, 1386, 2385
HhaI GCGC 2 cut(s) 679, 1785
Hin1I GRCGYC 1 cut(s) 1007
Hin1II CATG 6 cut(s) 709, 1717, 1996, 2142, 2234, 2281
Hin6I GCGC 2 cut(s) 677, 1783
HinP1I GCGC 2 cut(s) 677, 1783
HindIII AAGCTT 2 cut(s) 439, 1661
HpaII CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
HphI GGTGA 2 cut(s) 1244, 1955
Hpy166II GTNNAC 7 cut(s) 724, 745, 1149, 1210, 1531, 1541, 2249
Hpy188III TCNNGA 6 cut(s) 536, 590, 1581, 1590, 1832, 1892
Hpy8I GTNNAC 7 cut(s) 724, 745, 1149, 1210, 1531, 1541, 2249
Hpy99I CGWCG 2 cut(s) 334, 457
HpyAV CCTTC 8 cut(s) 401, 555, 1417, 1505, 1747, 1949, 2009, 2177
HpyCH4III ACNGT 4 cut(s) 205, 310, 872, 902
HpyF10VI GCNNNNNNNGC 2 cut(s) 683, 1006
Hsp92I GRCGYC 1 cut(s) 1007
Hsp92II CATG 6 cut(s) 709, 1717, 1996, 2142, 2234, 2281
HspAI GCGC 2 cut(s) 677, 1783
Ksp22I TGATCA 1 cut(s) 261
LguI GCTCTTC 1 cut(s) 1410
LmnI GCTCC 4 cut(s) 410, 969, 1438, 2068
Lsp1109I GCAGC 7 cut(s) 68, 564, 586, 857, 1249, 1428, 1459
LweI GCATC 7 cut(s) 39, 561, 759, 923, 1322, 2213, 2235
MaeI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1809, 1929
MaeIII GTNAC 8 cut(s) 366, 465, 866, 1036, 1232, 1358, 1943, 1988
MbiI CCGCTC 1 cut(s) 611
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 3 cut(s) 859, 1254, 1861
MhlI GDGCHC 1 cut(s) 283
MlyI GAGTC 5 cut(s) 236, 541, 1365, 1829, 2204
MmeI TCCRAC 3 cut(s) 435, 1957, 2344
Mph1103I ATGCAT 2 cut(s) 2140, 2228
MroXI GAANNNNTTC 2 cut(s) 1388, 1607
MseI TTAA 8 cut(s) 779, 974, 1052, 1251, 2207, 2385, 2411, 2437
MslI CAYNNNNRTG 1 cut(s) 1015
MspA1I CMGCKG 2 cut(s) 59, 577
MspI CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
MunI CAATTG 1 cut(s) 732
MvaI CCWGG 7 cut(s) 114, 147, 552, 1238, 1436, 1840, 2337
MvnI CGCG 1 cut(s) 1145
MwoI GCNNNNNNNGC 2 cut(s) 683, 1006
NciI CCSGG 3 cut(s) 471, 502, 1227
NdeI CATATG 2 cut(s) 563, 1984
NlaIII CATG 6 cut(s) 709, 1717, 1996, 2142, 2234, 2281
NlaIV GGNNCC 3 cut(s) 229, 861, 1998
NmuCI GTSAC 4 cut(s) 866, 1036, 1232, 1943
NsiI ATGCAT 2 cut(s) 2140, 2228
NspI RCATGY 1 cut(s) 1717
PaeR7I CTCGAG 1 cut(s) 2426
PceI AGGCCT 1 cut(s) 949
PciSI GCTCTTC 1 cut(s) 1410
PdmI GAANNNNTTC 2 cut(s) 1388, 1607
PfeI GAWTC 6 cut(s) 220, 1096, 1222, 1733, 2122, 2340
PflFI GACNNNGTC 1 cut(s) 2278
PfoI TCCNGGA 1 cut(s) 550
PkrI GCNGC 9 cut(s) 58, 576, 579, 847, 1264, 1443, 1474, 1575, 2163
PleI GAGTC 5 cut(s) 236, 540, 1365, 1829, 2203
PpsI GAGTC 5 cut(s) 236, 540, 1365, 1829, 2203
PsiI TTATAA 1 cut(s) 2403
Psp6I CCWGG 7 cut(s) 112, 145, 550, 1236, 1434, 1838, 2335
PspEI GGTNACC 2 cut(s) 1232, 1943
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 7 cut(s) 112, 145, 550, 1236, 1434, 1838, 2335
PspN4I GGNNCC 3 cut(s) 229, 861, 1998
PspPI GGNCC 4 cut(s) 635, 1113, 1523, 1996
PspXI VCTCGAGB 1 cut(s) 2426
PstI CTGCAG 3 cut(s) 58, 787, 1267
PsuI RGATCY 3 cut(s) 859, 1254, 1861
PsyI GACNNNGTC 1 cut(s) 2278
PvuII CAGCTG 2 cut(s) 59, 577
RsaI GTAC 6 cut(s) 182, 1148, 1399, 1532, 1540, 2250
RsaNI GTAC 6 cut(s) 181, 1147, 1398, 1531, 1539, 2249
RseI CAYNNNNRTG 1 cut(s) 1015
SapI GCTCTTC 1 cut(s) 1410
SaqAI TTAA 8 cut(s) 779, 974, 1052, 1251, 2207, 2385, 2411, 2437
SatI GCNGC 9 cut(s) 57, 575, 578, 846, 1263, 1442, 1473, 1574, 2162
Sau96I GGNCC 4 cut(s) 635, 1113, 1523, 1996
SchI GAGTC 5 cut(s) 236, 541, 1365, 1829, 2204
SduI GDGCHC 1 cut(s) 283
SfaNI GCATC 7 cut(s) 39, 561, 759, 923, 1322, 2213, 2235
SfcI CTRYAG 4 cut(s) 54, 783, 1263, 2286
Sfr274I CTCGAG 1 cut(s) 2426
SinI GGWCC 2 cut(s) 635, 1523
SlaI CTCGAG 1 cut(s) 2426
SmiMI CAYNNNNRTG 1 cut(s) 1015
SmlI CTYRAG 4 cut(s) 493, 1100, 1579, 2426
SmoI CTYRAG 4 cut(s) 493, 1100, 1579, 2426
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 8 cut(s) 163, 611, 796, 1143, 1573, 1648, 1800, 2161
SspI AATATT 1 cut(s) 349
SspMI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1809, 1929
StuI AGGCCT 1 cut(s) 949
StyI CCWWGG 2 cut(s) 102, 854
TaaI ACNGT 4 cut(s) 205, 310, 872, 902
TaqI TCGA 6 cut(s) 223, 329, 444, 1083, 1452, 2427
TaqII GACCGA 1 cut(s) 840
TatI WGTACW 2 cut(s) 1530, 2248
TauI GCSGC 2 cut(s) 1576, 2164
TfiI GAWTC 6 cut(s) 220, 1096, 1222, 1733, 2122, 2340
Tru1I TTAA 8 cut(s) 779, 974, 1052, 1251, 2207, 2385, 2411, 2437
Tru9I TTAA 8 cut(s) 779, 974, 1052, 1251, 2207, 2385, 2411, 2437
TscAI CASTG 3 cut(s) 94, 664, 1572
TseFI GTSAC 4 cut(s) 866, 1036, 1232, 1943
TseI GCWGC 7 cut(s) 56, 574, 577, 845, 1262, 1441, 1472
Tsp45I GTSAC 4 cut(s) 866, 1036, 1232, 1943
TspGWI ACGGA 4 cut(s) 441, 627, 2169, 2225
TspRI CASTG 3 cut(s) 94, 664, 1572
Tth111I GACNNNGTC 1 cut(s) 2278
VpaK11BI GGWCC 2 cut(s) 635, 1523
XagI CCTNNNNNAGG 1 cut(s) 2426
XapI RAATTY 3 cut(s) 325, 775, 1484
XceI RCATGY 1 cut(s) 1717
XcmI CCANNNNNNNNNTGG 1 cut(s) 2126
XhoI CTCGAG 1 cut(s) 2426
XmaJI CCTAGG 1 cut(s) 854
XmiI GTMKAC 1 cut(s) 1209
XmnI GAANNNNTTC 2 cut(s) 1388, 1607
XspI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1809, 1929
Zsp2I ATGCAT 2 cut(s) 2140, 2228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.