Rmu_co8279377.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8279377.1
Physical Location & Seq
Reverse (-)
2 .. 814
813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8279377.1_g000001.1.cds

Sequence Viewer

Length: 813 bp
atgggatgggactttaggacaggtcttaaaaggggattatcagcatggaacaattcagaagacccatgtccaggggaattcacttatggaattgaaatggaacctcatgcataccctgaggcatattttcggaaaggtggcctgaaattttatcgttctggcccatggaatggcctaagattcagtggtgcaccagaactaaggcctaatccaatttatagtttctattttgtgtataatgatgatgaagtttactacatgtacaaacttcaaagcaagtctgtaatttcaatcatggtcttaaatggaaccactagcacacgcgatcgccttacatggattggagccgagcaaacttggagggcctatgcatcagtacctagagatttctgtgatcaatataacctctgtggagcaaatgcaaattgtatcatcagtaacaatccagtatgtgaatgtctacaaggattcacgcctaagtcaccagagaaatggaattcgacagactggtcacttggatgtatgcgcaagaaacccctaagctgccaggaaagtgataaagatgggtttgtcaagttcaataacttgaaattgccggatactacacattcttggctgaacaaaagtatgaacatcaaggaatgcaaagccaaatgtttgaacaactgttcctgtatggcttatacaagctcggacatcagagcaggaggttctggctgcgccatttggtttggtgatctactagatatcagaaagtttccggatgctggccaggatctatacattcgaatgtcggcttcagagataggtatg

Protein Analysis

271

Amino Acids

30.79

Weight (kDa)

7.88

Isoelectric Point (pI)

46.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 508
Acc16I TGCGCA 1 cut(s) 527
AccB7I CCANNNNNTGG 1 cut(s) 170
AccI GTMKAC 1 cut(s) 460
AccII CGCG 1 cut(s) 324
AccIII TCCGGA 1 cut(s) 760
AclWI GGATC 1 cut(s) 783
AcoI YGGCCR 1 cut(s) 769
AcsI RAATTY 3 cut(s) 77, 146, 496
AcuI CTGAAG 1 cut(s) 783
AfaI GTAC 2 cut(s) 263, 378
AfiI CCNNNNNNNGG 3 cut(s) 71, 170, 767
AflIII ACRYGT 1 cut(s) 258
AgsI TTSAA 6 cut(s) 95, 272, 291, 580, 589, 661
AjnI CCWGG 3 cut(s) 70, 546, 771
AloI GAACNNNNNNTCC 2 cut(s) 653, 685
AluBI AGCT 2 cut(s) 543, 690
AluI AGCT 2 cut(s) 543, 690
Alw21I GWGCWC 1 cut(s) 193
Alw44I GTGCAC 1 cut(s) 189
AlwI GGATC 1 cut(s) 783
Aor13HI TCCGGA 1 cut(s) 760
AoxI GGCC 6 cut(s) 139, 160, 172, 203, 363, 769
ApaLI GTGCAC 1 cut(s) 189
ApeKI GCWGC 2 cut(s) 543, 717
ApoI RAATTY 3 cut(s) 77, 146, 496
AsiSI GCGATCGC 1 cut(s) 328
AspLEI GCGC 2 cut(s) 528, 722
AspS9I GGNCC 2 cut(s) 161, 363
AsuHPI GGTGA 2 cut(s) 474, 746
AsuII TTCGAA 1 cut(s) 787
AxyI CCTNAGG 1 cut(s) 117
BaeGI GKGCMC 1 cut(s) 193
BalI TGGCCA 1 cut(s) 771
BbsI GAAGAC 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 193
BbvI GCAGC 2 cut(s) 530, 704
BccI CCATC 1 cut(s) 557
BciT130I CCWGG 3 cut(s) 72, 548, 773
BciVI GTATCC 1 cut(s) 592
BclI TGATCA 1 cut(s) 394
BfaI CTAG 3 cut(s) 315, 381, 743
BfuI GTATCC 1 cut(s) 592
BisI GCNGC 2 cut(s) 544, 718
BlsI GCNGC 2 cut(s) 545, 719
Bme1390I CCNGG 3 cut(s) 72, 548, 773
BmgT120I GGNCC 2 cut(s) 161, 363
BmiI GGNNCC 3 cut(s) 102, 310, 346
BmrFI CCNGG 3 cut(s) 72, 548, 773
BmsI GCATC 2 cut(s) 380, 754
BoxI GACNNNNGTC 1 cut(s) 66
BpiI GAAGAC 1 cut(s) 66
Bpu10I CCTNAGC 1 cut(s) 539
Bpu14I TTCGAA 1 cut(s) 787
BsaJI CCNNGG 2 cut(s) 71, 164
BsaWI WCCGGW 1 cut(s) 760
Bsc4I CCNNNNNNNGG 3 cut(s) 71, 170, 767
Bse1I ACTGG 2 cut(s) 446, 512
Bse21I CCTNAGG 1 cut(s) 117
BseAI TCCGGA 1 cut(s) 760
BseBI CCWGG 3 cut(s) 72, 548, 773
BseDI CCNNGG 2 cut(s) 71, 164
BseGI GGATG 3 cut(s) 11, 524, 769
BseLI CCNNNNNNNGG 3 cut(s) 71, 170, 767
BseMII CTCAG 1 cut(s) 108
BseNI ACTGG 2 cut(s) 446, 512
BseSI GKGCMC 1 cut(s) 193
BseXI GCAGC 2 cut(s) 530, 704
Bsh1236I CGCG 1 cut(s) 324
Bsh1285I CGRYCG 1 cut(s) 328
BshFI GGCC 6 cut(s) 141, 162, 174, 205, 365, 771
BsiEI CGRYCG 1 cut(s) 328
BsiHKAI GWGCWC 1 cut(s) 193
BsiSI CCGG 2 cut(s) 596, 761
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 3 cut(s) 71, 170, 767
BsmFI GGGAC 1 cut(s) 23
BsmI GAATGC 1 cut(s) 647
BsnI GGCC 6 cut(s) 141, 162, 174, 205, 365, 771
Bsp119I TTCGAA 1 cut(s) 787
Bsp1286I GDGCHC 1 cut(s) 193
Bsp13I TCCGGA 1 cut(s) 760
Bsp1407I TGTACA 1 cut(s) 261
Bsp143I GATC 4 cut(s) 325, 394, 736, 775
Bsp19I CCATGG 1 cut(s) 164
BspANI GGCC 6 cut(s) 141, 162, 174, 205, 365, 771
BspCNI CTCAG 1 cut(s) 109
BspEI TCCGGA 1 cut(s) 760
BspFNI CGCG 1 cut(s) 324
BspLI GGNNCC 3 cut(s) 102, 310, 346
BspPI GGATC 1 cut(s) 783
BspT104I TTCGAA 1 cut(s) 787
BsrGI TGTACA 1 cut(s) 261
BsrI ACTGG 2 cut(s) 446, 512
BssECI CCNNGG 2 cut(s) 71, 164
BssMI GATC 4 cut(s) 325, 394, 736, 775
BssT1I CCWWGG 1 cut(s) 164
Bst2UI CCWGG 3 cut(s) 72, 548, 773
Bst4CI ACNGT 1 cut(s) 668
BstAUI TGTACA 1 cut(s) 261
BstBI TTCGAA 1 cut(s) 787
BstC8I GCNNGC 1 cut(s) 769
BstDEI CTNAG 5 cut(s) 117, 176, 200, 477, 539
BstDSI CCRYGG 1 cut(s) 164
BstF5I GGATG 3 cut(s) 11, 524, 769
BstFNI CGCG 1 cut(s) 324
BstHHI GCGC 2 cut(s) 528, 722
BstKTI GATC 4 cut(s) 328, 397, 739, 778
BstMBI GATC 4 cut(s) 325, 394, 736, 775
BstMCI CGRYCG 1 cut(s) 328
BstNI CCWGG 3 cut(s) 72, 548, 773
BstNSI RCATGY 1 cut(s) 262
BstPAI GACNNNNGTC 1 cut(s) 66
BstSCI CCNGG 3 cut(s) 70, 546, 771
BstSLI GKGCMC 1 cut(s) 193
BstUI CGCG 1 cut(s) 324
BstV1I GCAGC 2 cut(s) 530, 704
BstV2I GAAGAC 1 cut(s) 66
BstX2I RGATCY 1 cut(s) 775
BstXI CCANNNNNNTGG 1 cut(s) 492
BstYI RGATCY 1 cut(s) 775
Bsu36I CCTNAGG 1 cut(s) 117
BsuI GTATCC 1 cut(s) 592
BsuRI GGCC 6 cut(s) 141, 162, 174, 205, 365, 771
BtgI CCRYGG 1 cut(s) 164
BtsCI GGATG 3 cut(s) 11, 524, 769
BtsIMutI CAGTG 1 cut(s) 190
Cac8I GCNNGC 1 cut(s) 769
CfoI GCGC 2 cut(s) 528, 722
Cfr13I GGNCC 2 cut(s) 161, 363
Csp6I GTAC 2 cut(s) 262, 377
CviAII CATG 7 cut(s) 45, 66, 107, 165, 259, 295, 336
CviQI GTAC 2 cut(s) 262, 377
DdeI CTNAG 5 cut(s) 117, 176, 200, 477, 539
DpnI GATC 4 cut(s) 327, 396, 738, 777
DpnII GATC 4 cut(s) 325, 394, 736, 775
DrdI GACNNNNNNGTC 1 cut(s) 508
DseDI GACNNNNNNGTC 1 cut(s) 508
EaeI YGGCCR 1 cut(s) 769
Eco130I CCWWGG 1 cut(s) 164
Eco147I AGGCCT 1 cut(s) 205
Eco32I GATATC 1 cut(s) 748
Eco57I CTGAAG 1 cut(s) 783
Eco81I CCTNAGG 1 cut(s) 117
EcoO109I RGGNCCY 1 cut(s) 363
EcoRI GAATTC 2 cut(s) 77, 496
EcoRII CCWGG 3 cut(s) 70, 546, 771
EcoRV GATATC 1 cut(s) 748
EcoT14I CCWWGG 1 cut(s) 164
EcoT22I ATGCAT 2 cut(s) 112, 373
ErhI CCWWGG 1 cut(s) 164
FaeI CATG 7 cut(s) 48, 69, 110, 168, 262, 298, 339
FaqI GGGAC 1 cut(s) 23
FatI CATG 7 cut(s) 44, 65, 106, 164, 258, 294, 335
FbaI TGATCA 1 cut(s) 394
FblI GTMKAC 1 cut(s) 460
Fnu4HI GCNGC 2 cut(s) 544, 718
FokI GGATG 3 cut(s) 18, 531, 776
Fsp4HI GCNGC 2 cut(s) 544, 718
FspBI CTAG 3 cut(s) 315, 381, 743
FspI TGCGCA 1 cut(s) 527
GlaI GCGC 2 cut(s) 527, 721
GluI GCNGC 2 cut(s) 544, 718
HaeIII GGCC 6 cut(s) 141, 162, 174, 205, 365, 771
HapII CCGG 2 cut(s) 596, 761
HhaI GCGC 2 cut(s) 528, 722
Hin1II CATG 7 cut(s) 48, 69, 110, 168, 262, 298, 339
Hin6I GCGC 2 cut(s) 526, 720
HinP1I GCGC 2 cut(s) 526, 720
HinfI GANTC 2 cut(s) 180, 468
HpaII CCGG 2 cut(s) 596, 761
HphI GGTGA 2 cut(s) 474, 746
Hpy166II GTNNAC 3 cut(s) 191, 253, 461
Hpy188I TCNGA 6 cut(s) 58, 132, 694, 701, 752, 802
Hpy188III TCNNGA 1 cut(s) 761
Hpy8I GTNNAC 3 cut(s) 191, 253, 461
HpyCH4III ACNGT 1 cut(s) 668
HpyCH4V TGCA 5 cut(s) 110, 191, 371, 422, 645
HpyF3I CTNAG 5 cut(s) 117, 176, 200, 477, 539
Hsp92II CATG 7 cut(s) 48, 69, 110, 168, 262, 298, 339
HspAI GCGC 2 cut(s) 526, 720
Kpn2I TCCGGA 1 cut(s) 760
Ksp22I TGATCA 1 cut(s) 394
Kzo9I GATC 4 cut(s) 325, 394, 736, 775
LmnI GCTCC 2 cut(s) 344, 413
Lsp1109I GCAGC 2 cut(s) 530, 704
LweI GCATC 2 cut(s) 380, 754
MaeI CTAG 3 cut(s) 315, 381, 743
MaeIII GTNAC 3 cut(s) 437, 480, 510
MalI GATC 4 cut(s) 327, 396, 738, 777
MboI GATC 4 cut(s) 325, 394, 736, 775
MboII GAAGA 1 cut(s) 71
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 1 cut(s) 193
MlsI TGGCCA 1 cut(s) 771
MluCI AATT 9 cut(s) 52, 77, 90, 146, 213, 285, 424, 496, 590
MluNI TGGCCA 1 cut(s) 771
MnlI CCTC 5 cut(s) 112, 114, 354, 416, 701
Mox20I TGGCCA 1 cut(s) 771
Mph1103I ATGCAT 2 cut(s) 112, 373
MroI TCCGGA 1 cut(s) 760
MscI TGGCCA 1 cut(s) 771
MseI TTAA 2 cut(s) 27, 302
MslI CAYNNNNRTG 2 cut(s) 517, 788
Msp20I TGGCCA 1 cut(s) 771
MspI CCGG 2 cut(s) 596, 761
MspR9I CCNGG 3 cut(s) 72, 548, 773
Mva1269I GAATGC 1 cut(s) 647
MvaI CCWGG 3 cut(s) 72, 548, 773
MvnI CGCG 1 cut(s) 324
NcoI CCATGG 1 cut(s) 164
NdeII GATC 4 cut(s) 325, 394, 736, 775
NlaIII CATG 7 cut(s) 48, 69, 110, 168, 262, 298, 339
NlaIV GGNNCC 3 cut(s) 102, 310, 346
NmeAIII GCCGAG 1 cut(s) 373
NmuCI GTSAC 2 cut(s) 480, 510
NsbI TGCGCA 1 cut(s) 527
NsiI ATGCAT 2 cut(s) 112, 373
NspI RCATGY 1 cut(s) 262
NspV TTCGAA 1 cut(s) 787
PceI AGGCCT 1 cut(s) 205
PciI ACATGT 1 cut(s) 258
PctI GAATGC 1 cut(s) 647
PfeI GAWTC 2 cut(s) 180, 468
PflMI CCANNNNNTGG 1 cut(s) 170
PkrI GCNGC 2 cut(s) 545, 719
Ple19I CGATCG 1 cut(s) 328
PscI ACATGT 1 cut(s) 258
PshAI GACNNNNGTC 1 cut(s) 66
Psp6I CCWGG 3 cut(s) 70, 546, 771
PspGI CCWGG 3 cut(s) 70, 546, 771
PspN4I GGNNCC 3 cut(s) 102, 310, 346
PspPI GGNCC 2 cut(s) 161, 363
PsuI RGATCY 1 cut(s) 775
PvuI CGATCG 1 cut(s) 328
RgaI GCGATCGC 1 cut(s) 328
RsaI GTAC 2 cut(s) 263, 378
RsaNI GTAC 2 cut(s) 262, 377
RseI CAYNNNNRTG 2 cut(s) 517, 788
SaqAI TTAA 2 cut(s) 27, 302
SatI GCNGC 2 cut(s) 544, 718
Sau3AI GATC 4 cut(s) 325, 394, 736, 775
Sau96I GGNCC 2 cut(s) 161, 363
ScrFI CCNGG 3 cut(s) 72, 548, 773
SduI GDGCHC 1 cut(s) 193
SetI ASST 9 cut(s) 25, 106, 139, 382, 408, 545, 692, 712, 811
SfaAI GCGATCGC 1 cut(s) 328
SfaNI GCATC 2 cut(s) 380, 754
SfuI TTCGAA 1 cut(s) 787
SgfI GCGATCGC 1 cut(s) 328
SmiMI CAYNNNNRTG 2 cut(s) 517, 788
Sse9I AATT 9 cut(s) 52, 77, 90, 146, 213, 285, 424, 496, 590
SseBI AGGCCT 1 cut(s) 205
SspMI CTAG 3 cut(s) 315, 381, 743
StuI AGGCCT 1 cut(s) 205
StyD4I CCNGG 3 cut(s) 70, 546, 771
StyI CCWWGG 1 cut(s) 164
TaaI ACNGT 1 cut(s) 668
TaqI TCGA 2 cut(s) 500, 787
TasI AATT 9 cut(s) 52, 77, 90, 146, 213, 285, 424, 496, 590
TatI WGTACW 1 cut(s) 261
TfiI GAWTC 2 cut(s) 180, 468
Tru1I TTAA 2 cut(s) 27, 302
Tru9I TTAA 2 cut(s) 27, 302
TscAI CASTG 1 cut(s) 190
TseFI GTSAC 2 cut(s) 480, 510
TseI GCWGC 2 cut(s) 543, 717
Tsp45I GTSAC 2 cut(s) 480, 510
TspDTI ATGAA 2 cut(s) 261, 644
TspRI CASTG 1 cut(s) 190
Van91I CCANNNNNTGG 1 cut(s) 170
VneI GTGCAC 1 cut(s) 189
XapI RAATTY 3 cut(s) 77, 146, 496
XceI RCATGY 1 cut(s) 262
XmiI GTMKAC 1 cut(s) 460
XspI CTAG 3 cut(s) 315, 381, 743
Zsp2I ATGCAT 2 cut(s) 112, 373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.