Rorug02G0357200

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
45117253 .. 45118972
1720 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0357200.1

Sequence Viewer

Length: 978 bp
ATGCAGATCTTCGAGCTCGGTTCTTCTCCATTCAAATACTCAGACGCCCAACACAAAACTAATTATACCATATTCAGTTGTCCACCGTCAGATGAAAGAGAACGGTATCCATCCTTTTGTACACTGACGAAACTGAGCCCTTGCCTTGGCAATCACAGCAGCAAGATGTATGCTCTTCAGGATGGATGTGCAGAACTTAAATACATGCCCAATCTGGTGTCGTGTACCAAGGTGGAAGACTACATGTCAGTACCATCTGTTTGGATGCAGCCTGTGAAGCTCAAATGGTCCAGACCATCGTGTCAACGTTGTGAAGAGACGGGCAAGACATGTGGATTGCTGAATCAGGTTGCAGATGACCAAACCACTGAAGAAACTCAATGTTTAGATGTGCCAAAAGGTCCTAATCGTGGAAGACGAATCTTAGAGATATTAGGTATTTGTGCACTTGTTACAGTCCTCATAGGAGCGGCGACCTTAATGTACTATGTGTACAGTTCTAAGAAAATAGAAGAAGAAAATCAATTGAGAATTGAAAAGTTTTTGGATGATTATAGAGCTCTTAAACCAAGTAGATATGCTTATGATGATATTAGGAGGATAACAAATCAATTTGCTGACAAGTTGGGCCAAGGAGCTTATGGAACCGTGTACAAAGGAAAGCTTTCCTCTGAATTGCTTGTTGCGGTGAAAATCCTTGACAATTCAAATGAAAAGGGGGAAGATTTCATTAATGAAGTGGGAACAAATGGGTCTCATCCACCATGTCAATGTGGTTCGCTTGATGATAAGAACTCATTTCTTGGTTGGGAAAAGTTGCAAAATATTGCTTTAGGTATAGCTAAAGGAATCGAATATCTTCACCAAGGGTGTGACCAGAGAATCCTCCATTTTGATATCAAACCTAATAACATTTTGCTAGCACTACTACAGAAAATAGATTTAAGGACGTTCGAAAAATGTCCTAAAAAACTTTAG

Protein Analysis

325

Amino Acids

36.77

Weight (kDa)

7.43

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 261 - 308 3.7e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 300
AccBSI CCGCTC 1 cut(s) 470
AciI CCGC 2 cut(s) 470, 686
AclI AACGTT 1 cut(s) 307
AcuI CTGAAG 2 cut(s) 161, 390
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 6 cut(s) 121, 226, 252, 485, 494, 653
AfiI CCNNNNNNNGG 2 cut(s) 146, 410
AflIII ACRYGT 2 cut(s) 243, 329
AgsI TTSAA 3 cut(s) 34, 536, 708
AhdI GACNNNNNGTC 1 cut(s) 244
AluBI AGCT 6 cut(s) 16, 280, 560, 638, 664, 842
AluI AGCT 6 cut(s) 16, 280, 560, 638, 664, 842
Alw21I GWGCWC 3 cut(s) 18, 448, 562
Alw26I GTCTC 2 cut(s) 311, 759
Alw44I GTGCAC 1 cut(s) 444
AoxI GGCC 1 cut(s) 628
ApaLI GTGCAC 1 cut(s) 444
ApeKI GCWGC 2 cut(s) 159, 268
AseI ATTAAT 1 cut(s) 732
Asp700I GAANNNNTTC 2 cut(s) 664, 858
AspS9I GGNCC 3 cut(s) 288, 401, 628
AsuHPI GGTGA 2 cut(s) 700, 854
AsuII TTCGAA 1 cut(s) 954
AsuNHI GCTAGC 1 cut(s) 919
AvaII GGWCC 2 cut(s) 288, 401
BaeGI GKGCMC 1 cut(s) 448
BanII GRGCYC 3 cut(s) 18, 140, 562
BbsI GAAGAC 2 cut(s) 243, 421
Bbv12I GWGCWC 3 cut(s) 18, 448, 562
BbvI GCAGC 2 cut(s) 171, 280
BccI CCATC 4 cut(s) 118, 176, 262, 304
BciVI GTATCC 1 cut(s) 117
BcoDI GTCTC 2 cut(s) 311, 759
BfaI CTAG 1 cut(s) 920
BfmI CTRYAG 1 cut(s) 929
BfuI GTATCC 1 cut(s) 117
BglII AGATCT 1 cut(s) 6
BisI GCNGC 3 cut(s) 160, 269, 471
BlsI GCNGC 3 cut(s) 161, 270, 472
Bme18I GGWCC 2 cut(s) 288, 401
BmeRI GACNNNNNGTC 1 cut(s) 244
BmgT120I GGNCC 3 cut(s) 288, 401, 628
BmiI GGNNCC 1 cut(s) 646
BmsI GCATC 1 cut(s) 255
BmtI GCTAGC 1 cut(s) 923
BpiI GAAGAC 2 cut(s) 243, 421
Bpu14I TTCGAA 1 cut(s) 954
BsaHI GRCGYC 1 cut(s) 45
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 4 cut(s) 145, 228, 631, 865
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 410
BseDI CCNNGG 4 cut(s) 145, 228, 631, 865
BseGI GGATG 6 cut(s) 110, 187, 191, 270, 553, 757
BseLI CCNNNNNNNGG 2 cut(s) 146, 410
BseMII CTCAG 2 cut(s) 54, 125
BseSI GKGCMC 1 cut(s) 448
BseXI GCAGC 2 cut(s) 171, 280
BsgI GTGCAG 1 cut(s) 210
BshFI GGCC 1 cut(s) 630
BsiHKAI GWGCWC 3 cut(s) 18, 448, 562
BslI CCNNNNNNNGG 2 cut(s) 146, 410
BsmAI GTCTC 2 cut(s) 311, 759
BsmBI CGTCTC 1 cut(s) 311
BsnI GGCC 1 cut(s) 630
Bso31I GGTCTC 1 cut(s) 759
Bsp119I TTCGAA 1 cut(s) 954
Bsp1286I GDGCHC 4 cut(s) 18, 140, 448, 562
Bsp1407I TGTACA 3 cut(s) 119, 492, 651
Bsp143I GATC 1 cut(s) 6
BspACI CCGC 2 cut(s) 470, 686
BspANI GGCC 1 cut(s) 630
BspCNI CTCAG 2 cut(s) 53, 126
BspLI GGNNCC 1 cut(s) 646
BspOI GCTAGC 1 cut(s) 923
BspQI GCTCTTC 1 cut(s) 180
BspT104I TTCGAA 1 cut(s) 954
BspTNI GGTCTC 1 cut(s) 759
BsrBI CCGCTC 1 cut(s) 470
BsrGI TGTACA 3 cut(s) 119, 492, 651
BssECI CCNNGG 4 cut(s) 145, 228, 631, 865
BssMI GATC 1 cut(s) 6
BssNI GRCGYC 1 cut(s) 45
BssT1I CCWWGG 4 cut(s) 145, 228, 631, 865
Bst4CI ACNGT 5 cut(s) 87, 105, 457, 497, 649
Bst6I CTCTTC 2 cut(s) 180, 309
BstACI GRCGYC 1 cut(s) 45
BstAUI TGTACA 3 cut(s) 119, 492, 651
BstBI TTCGAA 1 cut(s) 954
BstC8I GCNNGC 1 cut(s) 921
BstDEI CTNAG 4 cut(s) 40, 134, 424, 501
BstF5I GGATG 6 cut(s) 110, 187, 191, 270, 553, 757
BstKTI GATC 1 cut(s) 9
BstMAI GTCTC 2 cut(s) 311, 759
BstMBI GATC 1 cut(s) 6
BstMWI GCNNNNNNNGC 2 cut(s) 156, 277
BstNSI RCATGY 3 cut(s) 208, 247, 333
BstSFI CTRYAG 1 cut(s) 929
BstSLI GKGCMC 1 cut(s) 448
BstV1I GCAGC 2 cut(s) 171, 280
BstV2I GAAGAC 2 cut(s) 243, 421
BstX2I RGATCY 1 cut(s) 6
BstXI CCANNNNNNTGG 1 cut(s) 261
BstYI RGATCY 1 cut(s) 6
BsuI GTATCC 1 cut(s) 117
BsuRI GGCC 1 cut(s) 630
BtsCI GGATG 6 cut(s) 110, 187, 191, 270, 553, 757
BtsIMutI CAGTG 2 cut(s) 122, 366
Cac8I GCNNGC 1 cut(s) 921
Cfr13I GGNCC 3 cut(s) 288, 401, 628
CseI GACGC 1 cut(s) 53
Csp6I GTAC 6 cut(s) 120, 225, 251, 484, 493, 652
CspCI CAANNNNNGTGG 2 cut(s) 313, 348
CviAII CATG 4 cut(s) 205, 244, 330, 765
CviJI RGCY 9 cut(s) 16, 138, 271, 280, 560, 630, 638, 664, 842
CviKI_1 RGCY 9 cut(s) 16, 138, 271, 280, 560, 630, 638, 664, 842
CviQI GTAC 6 cut(s) 120, 225, 251, 484, 493, 652
DdeI CTNAG 4 cut(s) 40, 134, 424, 501
DpnI GATC 1 cut(s) 8
DpnII GATC 1 cut(s) 6
DrdI GACNNNNNNGTC 1 cut(s) 300
DriI GACNNNNNGTC 1 cut(s) 244
DseDI GACNNNNNNGTC 1 cut(s) 300
Eam1104I CTCTTC 2 cut(s) 180, 309
Eam1105I GACNNNNNGTC 1 cut(s) 244
EarI CTCTTC 2 cut(s) 180, 309
Ecl136II GAGCTC 2 cut(s) 16, 560
Eco130I CCWWGG 4 cut(s) 145, 228, 631, 865
Eco24I GRGCYC 3 cut(s) 18, 140, 562
Eco31I GGTCTC 1 cut(s) 759
Eco32I GATATC 1 cut(s) 898
Eco47I GGWCC 2 cut(s) 288, 401
Eco53kI GAGCTC 2 cut(s) 16, 560
Eco57I CTGAAG 2 cut(s) 161, 390
EcoICRI GAGCTC 2 cut(s) 16, 560
EcoO109I RGGNCCY 1 cut(s) 401
EcoRV GATATC 1 cut(s) 898
EcoT14I CCWWGG 4 cut(s) 145, 228, 631, 865
EcoT38I GRGCYC 3 cut(s) 18, 140, 562
ErhI CCWWGG 4 cut(s) 145, 228, 631, 865
Esp3I CGTCTC 1 cut(s) 311
FaeI CATG 4 cut(s) 208, 247, 333, 768
FalI AAGNNNNNCTT 2 cut(s) 648, 680
FatI CATG 4 cut(s) 204, 243, 329, 764
Fnu4HI GCNGC 3 cut(s) 160, 269, 471
FokI GGATG 6 cut(s) 97, 194, 198, 277, 560, 744
FriOI GRGCYC 3 cut(s) 18, 140, 562
Fsp4HI GCNGC 3 cut(s) 160, 269, 471
FspBI CTAG 1 cut(s) 920
GluI GCNGC 3 cut(s) 160, 269, 471
HaeIII GGCC 1 cut(s) 630
HgaI GACGC 1 cut(s) 53
Hin1I GRCGYC 1 cut(s) 45
Hin1II CATG 4 cut(s) 208, 247, 333, 768
HincII GTYRAC 1 cut(s) 305
HindII GTYRAC 1 cut(s) 305
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 4 cut(s) 343, 420, 849, 882
HphI GGTGA 2 cut(s) 700, 854
Hpy166II GTNNAC 7 cut(s) 83, 122, 225, 305, 446, 493, 652
Hpy188I TCNGA 3 cut(s) 43, 91, 673
Hpy188III TCNNGA 2 cut(s) 179, 291
Hpy8I GTNNAC 7 cut(s) 83, 122, 225, 305, 446, 493, 652
HpyCH4III ACNGT 5 cut(s) 87, 105, 457, 497, 649
HpyCH4IV ACGT 2 cut(s) 307, 950
HpyCH4V TGCA 6 cut(s) 4, 191, 268, 353, 446, 820
HpyF10VI GCNNNNNNNGC 2 cut(s) 156, 277
HpyF3I CTNAG 4 cut(s) 40, 134, 424, 501
HpySE526I ACGT 2 cut(s) 307, 950
Hsp92I GRCGYC 1 cut(s) 45
Hsp92II CATG 4 cut(s) 208, 247, 333, 768
Kzo9I GATC 1 cut(s) 6
LguI GCTCTTC 1 cut(s) 180
LmnI GCTCC 2 cut(s) 467, 635
LpnPI CCDG 6 cut(s) 164, 200, 285, 304, 332, 890
Lsp1109I GCAGC 2 cut(s) 171, 280
LweI GCATC 1 cut(s) 255
MaeI CTAG 1 cut(s) 920
MaeII ACGT 2 cut(s) 307, 950
MaeIII GTNAC 2 cut(s) 451, 872
MalI GATC 1 cut(s) 8
MbiI CCGCTC 1 cut(s) 470
MboI GATC 1 cut(s) 6
MfeI CAATTG 1 cut(s) 524
MflI RGATCY 1 cut(s) 6
MhlI GDGCHC 4 cut(s) 18, 140, 448, 562
MluCI AATT 6 cut(s) 61, 524, 531, 611, 674, 703
MnlI CCTC 4 cut(s) 470, 591, 679, 896
MroXI GAANNNNTTC 2 cut(s) 664, 858
MseI TTAA 5 cut(s) 198, 479, 564, 732, 944
MslI CAYNNNNRTG 1 cut(s) 769
MunI CAATTG 1 cut(s) 524
MwoI GCNNNNNNNGC 2 cut(s) 156, 277
NdeII GATC 1 cut(s) 6
NheI GCTAGC 1 cut(s) 919
NlaIII CATG 4 cut(s) 208, 247, 333, 768
NlaIV GGNNCC 1 cut(s) 646
NmuCI GTSAC 1 cut(s) 872
NspI RCATGY 3 cut(s) 208, 247, 333
NspV TTCGAA 1 cut(s) 954
PciI ACATGT 2 cut(s) 243, 329
PciSI GCTCTTC 1 cut(s) 180
PcsI WCGNNNNNNNCGW 1 cut(s) 415
PdmI GAANNNNTTC 2 cut(s) 664, 858
PfeI GAWTC 4 cut(s) 343, 420, 849, 882
PkrI GCNGC 3 cut(s) 161, 270, 472
PpuMI RGGWCCY 1 cut(s) 401
PscI ACATGT 2 cut(s) 243, 329
PshBI ATTAAT 1 cut(s) 732
Psp124BI GAGCTC 2 cut(s) 18, 562
Psp1406I AACGTT 1 cut(s) 307
Psp5II RGGWCCY 1 cut(s) 401
PspN4I GGNNCC 1 cut(s) 646
PspPI GGNCC 3 cut(s) 288, 401, 628
PspPPI RGGWCCY 1 cut(s) 401
PsuI RGATCY 1 cut(s) 6
RsaI GTAC 6 cut(s) 121, 226, 252, 485, 494, 653
RsaNI GTAC 6 cut(s) 120, 225, 251, 484, 493, 652
RseI CAYNNNNRTG 1 cut(s) 769
SacI GAGCTC 2 cut(s) 18, 562
SapI GCTCTTC 1 cut(s) 180
SaqAI TTAA 5 cut(s) 198, 479, 564, 732, 944
SatI GCNGC 3 cut(s) 160, 269, 471
Sau3AI GATC 1 cut(s) 6
Sau96I GGNCC 3 cut(s) 288, 401, 628
SduI GDGCHC 4 cut(s) 18, 140, 448, 562
SfaNI GCATC 1 cut(s) 255
SfcI CTRYAG 1 cut(s) 929
SfuI TTCGAA 1 cut(s) 954
SinI GGWCC 2 cut(s) 288, 401
SmiMI CAYNNNNRTG 1 cut(s) 769
Sse9I AATT 6 cut(s) 61, 524, 531, 611, 674, 703
SsiI CCGC 2 cut(s) 470, 686
SspI AATATT 1 cut(s) 826
SspMI CTAG 1 cut(s) 920
SstI GAGCTC 2 cut(s) 18, 562
StyI CCWWGG 4 cut(s) 145, 228, 631, 865
TaaI ACNGT 5 cut(s) 87, 105, 457, 497, 649
TaiI ACGT 2 cut(s) 310, 953
TaqI TCGA 3 cut(s) 12, 852, 954
TasI AATT 6 cut(s) 61, 524, 531, 611, 674, 703
TatI WGTACW 4 cut(s) 119, 483, 492, 651
TauI GCSGC 1 cut(s) 473
TfiI GAWTC 4 cut(s) 343, 420, 849, 882
Tru1I TTAA 5 cut(s) 198, 479, 564, 732, 944
Tru9I TTAA 5 cut(s) 198, 479, 564, 732, 944
TscAI CASTG 2 cut(s) 129, 373
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 2 cut(s) 159, 268
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 4 cut(s) 108, 718, 726, 750
TspRI CASTG 2 cut(s) 129, 373
VneI GTGCAC 1 cut(s) 444
VpaK11BI GGWCC 2 cut(s) 288, 401
VspI ATTAAT 1 cut(s) 732
XceI RCATGY 3 cut(s) 208, 247, 333
XcmI CCANNNNNNNNNTGG 1 cut(s) 638
XmnI GAANNNNTTC 2 cut(s) 664, 858
XspI CTAG 1 cut(s) 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.