Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002525.1

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Reverse (-)

62963 .. 66856

Gene Structure 3894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002525.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

atggatgatgtttgttttgtggtgtttagtactagtttgctctttctgttgatcacagtttcatttgcagttgacagcatcagtcactcgcagtctatccgtgataacggcagcaccttggtttcaagtgatggaagctttgagctggggttcttcagtccaggtaactcgaaaaatcgttacttgggaatttggtacaaaaacatcccagttaaaactgttgtttgggttgcaaatcgatgcaaaccgattgatgactcatccggtgtgctgatgataaacagcacaggatatcttgtgctgttgggtcagaataagagtgtattttggtgggcaagtttagcgaagtatgcacagagtacaatggtacagcttttagattctggaaacttagtagtaagagatgtcacaaatggaaagtcattgtggcaaagcttcgattatccttctgatacattgttaccggaaatgaagatgggatgggactttaggacagaacttaaaaggggattatcagcatggaaaaattcagaagacccatgtccaggggaattcacctgtgggattgaaatggaaactcatgcataccctgaggtatatttccggaaaggtggtctgaaacattatcgttctggcccatggaatggccaagaattcagtggtgcatcagcactaaggcctaatccaatttatagtttcgactttgtgtataatgataatgaagtgtactacatgtacaaacttcgaagcaagtctgtaatttcaatcatggtcttaaatggaaccacaagcacacgcgatcgccttacatggattgaagcagagcaaacttggagggtctttgcatcagtacctagagatctctgtgatcgatataacctctgtggagcaaatgcaaattgtatcattagtgacagtccagtatgtcgatgtctacaaggattcatgcctaagtcaccagagaaatggaattcgaccgactggtcacttggatgtatgcgcaagaaacccctaagctgccaggaaagtgataaagacaggtttgtcaagttcactaatttgaaattgccggatgctacacattcttgggtggacagaagtatgaacatcaaggaatgcagagccaaatgcttgaacaactgttcctgtatggcttatacaagcttggatatcagagcaggaggttctggctgcgccattttgtttggtgatctactagatatcagaaagcttccggatgctggccaggatctatacattcgaatgtcggcttcagagatagatgatgatggtaaagtgaagacaggaattatagttgctgttgtgataggcgcagtgttttcaggaatgctcttatgcgtttacttttttcttgttgctgtgaagaggctttcaagcagttctggccaaggatttaacgagttcatgaatgaaattaaactgatagccaaacttcagcaccgaaatcttgtaaagattcttggttgttgcgtgcaagaagagaaaatgctgatgtatgaatacatgcccaacagaagcctggacttcttcatttttgatcaaacaagggaagaactactgttagattggcctaaacgtttccacatcatttgtggaattgctcggggtctcctctatctccaccaagattccaggctaaggattatacatagagatctaaaagcaagtaatgttctacttgatgatgaaatgaatcctaaaatttcggactttggcttggctagaatattaaccggaggagatcagactggaggaaatactaagagagtggtcgggacatatggctatatggcacctgaatatgctgctgatgggctattttctgtgaaatccgatgtctttagctttggtatattggtgctggagattataagtggaaggagaaacaaggggttttatgatccagacaacagccataatcttattggaaatgcttggagattgtggaatgaaggaaggcctttagaattgattgattcatggttagagagcgcatgtaatctatcggaagtggaagtgttacgttgcattcaagttggtcttttgtgcgtgcaacatcatcctgaggatcggccaagcatggcatcggtggttataatgttgggaagtgatattgcattggctcaacctaaacaacctggtttctttatggaaaagaaacacgaagcaagccctgatataggtaatgaatcatcaaccatttcgcttttcgaagctcgagagcaagaatctccgggacggcgtcatatttccaaaagcagcagcaaatggaggaggcgtcgaccgagtggttctgcatcaccagaggaggcgccaatgaagaccgaaacgccgctgtatgccgaaacagcccaggtgttttccgggtcgacagtgattaccgccttctctttcaatatggtcgaggtcgcggagctggttggtgagggacgtggcggccatgtcgagatcattctgtatgtagagcatcccgctggtgaacaaccggggctgaagtacaaattgaccttcgcattggctcaggcggaagtctcatgttcgttgggagggacccgagccaagaaggcccagaatgagctttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

867

Amino Acids

97.16

Weight (kDa)

6.6

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1892, 2117
AasI	GACNNNNNNGTC	2 cut(s)	982, 1043
Acc16I	TGCGCA	1 cut(s)	1001
AccB1I	GGYRCC	2 cut(s)	1813, 2332
AccB7I	CCANNNNNTGG	1 cut(s)	644
AccI	GTMKAC	3 cut(s)	934, 2302, 2390
AccII	CGCG	2 cut(s)	798, 2432
AccIII	TCCGGA	2 cut(s)	603, 1234
AciI	CCGC	6 cut(s)	2354, 2403, 2432, 2457, 2493, 2546
AclI	AACGTT	1 cut(s)	1597
AclWI	GGATC	3 cut(s)	1257, 1916, 2097
AcoI	YGGCCR	5 cut(s)	646, 1243, 1405, 2093, 2458
AcsI	RAATTY	6 cut(s)	189, 526, 551, 653, 970, 1722
AcuI	CTGAAG	4 cut(s)	139, 1257, 1439, 2534
AcyI	GRCGYC	3 cut(s)	2263, 2299, 2333
AfaI	GTAC	8 cut(s)	31, 197, 361, 369, 728, 737, 852, 2519
AfiI	CCNNNNNNNGG	5 cut(s)	545, 644, 1241, 1659, 2201
AflIII	ACRYGT	1 cut(s)	732
AgsI	TTSAA	9 cut(s)	126, 569, 765, 818, 1063, 1135, 1395, 2054, 2416
AhlI	ACTAGT	1 cut(s)	32
AjiI	CACGTC	1 cut(s)	2453
AjnI	CCWGG	8 cut(s)	160, 544, 1020, 1245, 1539, 1652, 2158, 2373
AloI	GAACNNNNNNTCC	2 cut(s)	1127, 1159
Alw26I	GTCTC	2 cut(s)	1634, 2557
AlwI	GGATC	3 cut(s)	1257, 1916, 2097
Ama87I	CYCGRG	3 cut(s)	1623, 2238, 2574
Aor13HI	TCCGGA	2 cut(s)	603, 1234
ApeKI	GCWGC	6 cut(s)	111, 1017, 1191, 1826, 2280, 2283
ApoI	RAATTY	6 cut(s)	189, 526, 551, 653, 970, 1722
ArsI	GACNNNNNNTTYG	2 cut(s)	404, 436
AsiSI	GCGATCGC	1 cut(s)	802
AspLEI	GCGC	5 cut(s)	1002, 1196, 1334, 2015, 2335
AspS9I	GGNCC	3 cut(s)	635, 2571, 2587
AsuC2I	CCSGG	3 cut(s)	2256, 2386, 2508
AsuHPI	GGTGA	6 cut(s)	547, 948, 1220, 2313, 2456, 2510
AsuII	TTCGAA	3 cut(s)	745, 1261, 2232
AvaI	CYCGRG	3 cut(s)	1623, 2238, 2574
AvaII	GGWCC	1 cut(s)	2571
AxyI	CCTNAGG	2 cut(s)	591, 2085
BalI	TGGCCA	3 cut(s)	648, 1245, 1407
BanI	GGYRCC	2 cut(s)	1813, 2332
BbsI	GAAGAC	3 cut(s)	540, 1307, 2348
BbvI	GCAGC	6 cut(s)	123, 1004, 1178, 1813, 2292, 2295
BccI	CCATC	5 cut(s)	125, 469, 474, 1283, 1826
BceAI	ACGGC	2 cut(s)	124, 2276
BciT130I	CCWGG	8 cut(s)	162, 546, 1022, 1247, 1541, 1654, 2160, 2375
BclI	TGATCA	2 cut(s)	51, 1558
BcnI	CCSGG	3 cut(s)	2256, 2386, 2508
BcoDI	GTCTC	2 cut(s)	1634, 2557
BcuI	ACTAGT	1 cut(s)	32
BfaI	CTAG	4 cut(s)	33, 855, 1217, 1743
BfoI	RGCGCY	1 cut(s)	2336
BglI	GCCNNNNNGGC	1 cut(s)	2585
BglII	AGATCT	2 cut(s)	859, 1675
BisI	GCNGC	8 cut(s)	112, 1018, 1192, 1827, 2281, 2284, 2354, 2458
BlsI	GCNGC	8 cut(s)	113, 1019, 1193, 1828, 2282, 2285, 2355, 2459
BmcAI	AGTACT	1 cut(s)	31
Bme18I	GGWCC	1 cut(s)	2571
BmeT110I	CYCGRG	3 cut(s)	1623, 2238, 2574
BmgBI	CACGTC	1 cut(s)	2453
BmgT120I	GGNCC	3 cut(s)	635, 2571, 2587
BmiI	GGNNCC	5 cut(s)	784, 1815, 2334, 2572, 2573
BmrI	ACTGGG	1 cut(s)	203
BmsI	GCATC	9 cut(s)	87, 230, 674, 854, 1063, 1228, 2114, 2327, 2497
BmuI	ACTGGG	1 cut(s)	203
BoxI	GACNNNNGTC	1 cut(s)	540
BpiI	GAAGAC	3 cut(s)	540, 1307, 2348
BpmI	CTGGAG	2 cut(s)	1791, 1904
Bpu10I	CCTNAGC	3 cut(s)	1013, 1658, 2541
Bpu14I	TTCGAA	3 cut(s)	745, 1261, 2232
BpuMI	CCSGG	3 cut(s)	2256, 2386, 2508
Bsa29I	ATCGAT	2 cut(s)	238, 871
BsaHI	GRCGYC	3 cut(s)	2263, 2299, 2333
BsaI	GGTCTC	1 cut(s)	1634
BsaJI	CCNNGG	6 cut(s)	117, 545, 638, 1408, 2373, 2507
BsaWI	WCCGGW	5 cut(s)	263, 463, 603, 1234, 1754
BsaXI	ACNNNNNCTCC	2 cut(s)	2284, 2314
Bsc4I	CCNNNNNNNGG	5 cut(s)	545, 644, 1241, 1659, 2201
Bse1I	ACTGG	4 cut(s)	209, 920, 986, 1774
Bse21I	CCTNAGG	2 cut(s)	591, 2085
BseAI	TCCGGA	2 cut(s)	603, 1234
BseBI	CCWGG	8 cut(s)	162, 546, 1022, 1247, 1541, 1654, 2160, 2375
BseCI	ATCGAT	2 cut(s)	238, 871
BseDI	CCNNGG	6 cut(s)	117, 545, 638, 1408, 2373, 2507
BseGI	GGATG	9 cut(s)	10, 204, 260, 485, 998, 1078, 1243, 2080, 2488
BseLI	CCNNNNNNNGG	5 cut(s)	545, 644, 1241, 1659, 2201
BseMII	CTCAG	3 cut(s)	582, 2076, 2555
BseNI	ACTGG	4 cut(s)	209, 920, 986, 1774
BseRI	GAGGAG	4 cut(s)	1622, 1773, 2308, 2342
BseXI	GCAGC	6 cut(s)	123, 1004, 1178, 1813, 2292, 2295
BseYI	CCCAGC	1 cut(s)	145
Bsh1236I	CGCG	2 cut(s)	798, 2432
Bsh1285I	CGRYCG	3 cut(s)	802, 978, 2306
BshNI	GGYRCC	2 cut(s)	1813, 2332
BshVI	ATCGAT	2 cut(s)	238, 871
BsiEI	CGRYCG	3 cut(s)	802, 978, 2306
BsiHKCI	CYCGRG	3 cut(s)	1623, 2238, 2574
BsiSI	CCGG	9 cut(s)	264, 464, 604, 1070, 1235, 1755, 2255, 2385, 2507
BslFI	GGGAC	5 cut(s)	497, 1810, 2271, 2463, 2584
BslI	CCNNNNNNNGG	5 cut(s)	545, 644, 1241, 1659, 2201
BsmAI	GTCTC	2 cut(s)	1634, 2557
BsmFI	GGGAC	5 cut(s)	497, 1810, 2271, 2463, 2584
BsmI	GAATGC	3 cut(s)	1121, 1353, 2049
Bso31I	GGTCTC	1 cut(s)	1634
BsoBI	CYCGRG	3 cut(s)	1623, 2238, 2574
Bsp119I	TTCGAA	3 cut(s)	745, 1261, 2232
Bsp13I	TCCGGA	2 cut(s)	603, 1234
Bsp1407I	TGTACA	1 cut(s)	735
Bsp19I	CCATGG	1 cut(s)	638
BspACI	CCGC	6 cut(s)	2354, 2403, 2432, 2457, 2493, 2546
BspCNI	CTCAG	3 cut(s)	583, 2077, 2554
BspDI	ATCGAT	2 cut(s)	238, 871
BspEI	TCCGGA	2 cut(s)	603, 1234
BspFNI	CGCG	2 cut(s)	798, 2432
BspHI	TCATGA	1 cut(s)	1425
BspLI	GGNNCC	5 cut(s)	784, 1815, 2334, 2572, 2573
BspPI	GGATC	3 cut(s)	1257, 1916, 2097
BspT104I	TTCGAA	3 cut(s)	745, 1261, 2232
BspT107I	GGYRCC	2 cut(s)	1813, 2332
BspTNI	GGTCTC	1 cut(s)	1634
BsrGI	TGTACA	1 cut(s)	735
BsrI	ACTGG	4 cut(s)	209, 920, 986, 1774
BssECI	CCNNGG	6 cut(s)	117, 545, 638, 1408, 2373, 2507
BssNI	GRCGYC	3 cut(s)	2263, 2299, 2333
BssT1I	CCWWGG	3 cut(s)	117, 638, 1408
Bst2UI	CCWGG	8 cut(s)	162, 546, 1022, 1247, 1541, 1654, 2160, 2375
Bst4CI	ACNGT	6 cut(s)	58, 220, 917, 1142, 1581, 2395
Bst6I	CTCTTC	2 cut(s)	1379, 1494
BstACI	GRCGYC	3 cut(s)	2263, 2299, 2333
BstAUI	TGTACA	1 cut(s)	735
BstBI	TTCGAA	3 cut(s)	745, 1261, 2232
BstC8I	GCNNGC	4 cut(s)	1243, 1493, 2072, 2191
BstDEI	CTNAG	9 cut(s)	391, 591, 674, 951, 1013, 1658, 1782, 2085, 2541
BstDSI	CCRYGG	1 cut(s)	638
BstENI	CCTNNNNNAGG	1 cut(s)	2199
BstF5I	GGATG	9 cut(s)	10, 204, 260, 485, 998, 1078, 1243, 2080, 2488
BstFNI	CGCG	2 cut(s)	798, 2432
BstH2I	RGCGCY	1 cut(s)	2336
BstHHI	GCGC	5 cut(s)	1002, 1196, 1334, 2015, 2335
BstMAI	GTCTC	2 cut(s)	1634, 2557
BstMCI	CGRYCG	3 cut(s)	802, 978, 2306
BstMWI	GCNNNNNNNGC	5 cut(s)	341, 350, 1404, 2369, 2585
BstNI	CCWGG	8 cut(s)	162, 546, 1022, 1247, 1541, 1654, 2160, 2375
BstNSI	RCATGY	3 cut(s)	736, 1528, 2019
BstPAI	GACNNNNGTC	1 cut(s)	540
BstUI	CGCG	2 cut(s)	798, 2432
BstV1I	GCAGC	6 cut(s)	123, 1004, 1178, 1813, 2292, 2295
BstV2I	GAAGAC	3 cut(s)	540, 1307, 2348
BstX2I	RGATCY	3 cut(s)	859, 1249, 1675
BstXI	CCANNNNNNTGG	1 cut(s)	966
BstYI	RGATCY	3 cut(s)	859, 1249, 1675
Bsu15I	ATCGAT	2 cut(s)	238, 871
Bsu36I	CCTNAGG	2 cut(s)	591, 2085
BsuTUI	ATCGAT	2 cut(s)	238, 871
BtgI	CCRYGG	1 cut(s)	638
BtrI	CACGTC	1 cut(s)	2453
BtsCI	GGATG	9 cut(s)	10, 204, 260, 485, 998, 1078, 1243, 2080, 2488
BtsI	GCAGTG	1 cut(s)	1341
BtsIMutI	CAGTG	3 cut(s)	664, 1341, 2400
Cac8I	GCNNGC	4 cut(s)	1243, 1493, 2072, 2191
CciI	TCATGA	1 cut(s)	1425
CfoI	GCGC	5 cut(s)	1002, 1196, 1334, 2015, 2335
Cfr13I	GGNCC	3 cut(s)	635, 2571, 2587
ClaI	ATCGAT	2 cut(s)	238, 871
CseI	GACGC	2 cut(s)	2252, 2288
CsiI	ACCWGGT	1 cut(s)	2158
Csp6I	GTAC	8 cut(s)	30, 196, 360, 368, 727, 736, 851, 2518
CspCI	CAANNNNNGTGG	2 cut(s)	1592, 1627
CviQI	GTAC	8 cut(s)	30, 196, 360, 368, 727, 736, 851, 2518
DdeI	CTNAG	9 cut(s)	391, 591, 674, 951, 1013, 1658, 1782, 2085, 2541
DinI	GGCGCC	1 cut(s)	2334
DrdI	GACNNNNNNGTC	2 cut(s)	982, 1043
DseDI	GACNNNNNNGTC	2 cut(s)	982, 1043
EaeI	YGGCCR	5 cut(s)	646, 1243, 1405, 2093, 2458
Eam1104I	CTCTTC	2 cut(s)	1379, 1494
EarI	CTCTTC	2 cut(s)	1379, 1494
EciI	GGCGGA	1 cut(s)	2561
Eco130I	CCWWGG	3 cut(s)	117, 638, 1408
Eco147I	AGGCCT	2 cut(s)	679, 1981
Eco31I	GGTCTC	1 cut(s)	1634
Eco32I	GATATC	3 cut(s)	293, 1171, 1222
Eco47I	GGWCC	1 cut(s)	2571
Eco57I	CTGAAG	4 cut(s)	139, 1257, 1439, 2534
Eco81I	CCTNAGG	2 cut(s)	591, 2085
Eco88I	CYCGRG	3 cut(s)	1623, 2238, 2574
EcoNI	CCTNNNNNAGG	1 cut(s)	2199
EcoO109I	RGGNCCY	1 cut(s)	2571
EcoRI	GAATTC	3 cut(s)	551, 653, 970
EcoRII	CCWGG	8 cut(s)	160, 544, 1020, 1245, 1539, 1652, 2158, 2373
EcoRV	GATATC	3 cut(s)	293, 1171, 1222
EcoT14I	CCWWGG	3 cut(s)	117, 638, 1408
EcoT22I	ATGCAT	1 cut(s)	586
EgeI	GGCGCC	1 cut(s)	2334
EheI	GGCGCC	1 cut(s)	2334
ErhI	CCWWGG	3 cut(s)	117, 638, 1408
FalI	AAGNNNNNCTT	2 cut(s)	2046, 2078
FaqI	GGGAC	5 cut(s)	497, 1810, 2271, 2463, 2584
FauI	CCCGC	1 cut(s)	2500
FauNDI	CATATG	1 cut(s)	1801
FbaI	TGATCA	2 cut(s)	51, 1558
FblI	GTMKAC	3 cut(s)	934, 2302, 2390
Fnu4HI	GCNGC	8 cut(s)	112, 1018, 1192, 1827, 2281, 2284, 2354, 2458
FokI	GGATG	9 cut(s)	17, 191, 247, 492, 1005, 1085, 1250, 2067, 2475
Fsp4HI	GCNGC	8 cut(s)	112, 1018, 1192, 1827, 2281, 2284, 2354, 2458
FspBI	CTAG	4 cut(s)	33, 855, 1217, 1743
FspI	TGCGCA	1 cut(s)	1001
GlaI	GCGC	5 cut(s)	1001, 1195, 1333, 2014, 2334
GluI	GCNGC	8 cut(s)	112, 1018, 1192, 1827, 2281, 2284, 2354, 2458
GsaI	CCCAGC	1 cut(s)	149
GsuI	CTGGAG	2 cut(s)	1791, 1904
HaeII	RGCGCY	1 cut(s)	2336
HapII	CCGG	9 cut(s)	264, 464, 604, 1070, 1235, 1755, 2255, 2385, 2507
HgaI	GACGC	2 cut(s)	2252, 2288
HhaI	GCGC	5 cut(s)	1002, 1196, 1334, 2015, 2335
Hin1I	GRCGYC	3 cut(s)	2263, 2299, 2333
Hin6I	GCGC	5 cut(s)	1000, 1194, 1332, 2013, 2333
HinP1I	GCGC	5 cut(s)	1000, 1194, 1332, 2013, 2333
HincII	GTYRAC	3 cut(s)	73, 2303, 2391
HindII	GTYRAC	3 cut(s)	73, 2303, 2391
HindIII	AAGCTT	4 cut(s)	136, 433, 1162, 1229
HinfI	GANTC	9 cut(s)	257, 380, 942, 1477, 1649, 1714, 1997, 2210, 2249
HpaII	CCGG	9 cut(s)	264, 464, 604, 1070, 1235, 1755, 2255, 2385, 2507
HphI	GGTGA	6 cut(s)	547, 948, 1220, 2313, 2456, 2510
Hpy166II	GTNNAC	9 cut(s)	73, 727, 935, 1053, 1093, 1363, 2303, 2391, 2501
Hpy8I	GTNNAC	9 cut(s)	73, 727, 935, 1053, 1093, 1363, 2303, 2391, 2501
Hpy99I	CGWCG	1 cut(s)	2304
HpyAV	CCTTC	7 cut(s)	456, 1893, 1967, 1971, 2416, 2539, 2578
HpyCH4III	ACNGT	6 cut(s)	58, 220, 917, 1142, 1581, 2395
HpyCH4IV	ACGT	3 cut(s)	1597, 2044, 2452
HpyF10VI	GCNNNNNNNGC	5 cut(s)	341, 350, 1404, 2369, 2585
HpyF3I	CTNAG	9 cut(s)	391, 591, 674, 951, 1013, 1658, 1782, 2085, 2541
HpySE526I	ACGT	3 cut(s)	1597, 2044, 2452
Hsp92I	GRCGYC	3 cut(s)	2263, 2299, 2333
HspAI	GCGC	5 cut(s)	1000, 1194, 1332, 2013, 2333
KasI	GGCGCC	1 cut(s)	2332
KflI	GGGWCCC	1 cut(s)	2571
Kpn2I	TCCGGA	2 cut(s)	603, 1234
Ksp22I	TGATCA	2 cut(s)	51, 1558
LmnI	GCTCC	2 cut(s)	887, 2434
Lsp1109I	GCAGC	6 cut(s)	123, 1004, 1178, 1813, 2292, 2295
LweI	GCATC	9 cut(s)	87, 230, 674, 854, 1063, 1228, 2114, 2327, 2497
MabI	ACCWGGT	1 cut(s)	2158
MaeI	CTAG	4 cut(s)	33, 855, 1217, 1743
MaeII	ACGT	3 cut(s)	1597, 2044, 2452
MaeIII	GTNAC	9 cut(s)	83, 164, 179, 406, 459, 911, 954, 984, 2040
MboII	GAAGA	9 cut(s)	145, 484, 545, 1312, 1396, 1511, 1540, 1583, 2353
MflI	RGATCY	3 cut(s)	859, 1249, 1675
MlsI	TGGCCA	3 cut(s)	648, 1245, 1407
MluNI	TGGCCA	3 cut(s)	648, 1245, 1407
Mly113I	GGCGCC	1 cut(s)	2333
MlyI	GAGTC	1 cut(s)	251
Mox20I	TGGCCA	3 cut(s)	648, 1245, 1407
Mph1103I	ATGCAT	1 cut(s)	586
MroI	TCCGGA	2 cut(s)	603, 1234
MscI	TGGCCA	3 cut(s)	648, 1245, 1407
MseI	TTAA	7 cut(s)	213, 501, 776, 1416, 1437, 1751, 2602
MslI	CAYNNNNRTG	2 cut(s)	991, 1262
Msp20I	TGGCCA	3 cut(s)	648, 1245, 1407
MspA1I	CMGCKG	2 cut(s)	2356, 2495
MspI	CCGG	9 cut(s)	264, 464, 604, 1070, 1235, 1755, 2255, 2385, 2507
Mva1269I	GAATGC	3 cut(s)	1121, 1353, 2049
MvaI	CCWGG	8 cut(s)	162, 546, 1022, 1247, 1541, 1654, 2160, 2375
MvnI	CGCG	2 cut(s)	798, 2432
MwoI	GCNNNNNNNGC	5 cut(s)	341, 350, 1404, 2369, 2585
NarI	GGCGCC	1 cut(s)	2333
NciI	CCSGG	3 cut(s)	2256, 2386, 2508
NcoI	CCATGG	1 cut(s)	638
NdeI	CATATG	1 cut(s)	1801
NlaIV	GGNNCC	5 cut(s)	784, 1815, 2334, 2572, 2573
NmuCI	GTSAC	5 cut(s)	83, 406, 911, 954, 984
NsbI	TGCGCA	1 cut(s)	1001
NsiI	ATGCAT	1 cut(s)	586
NspI	RCATGY	3 cut(s)	736, 1528, 2019
NspV	TTCGAA	3 cut(s)	745, 1261, 2232
PaeR7I	CTCGAG	1 cut(s)	2238
PagI	TCATGA	1 cut(s)	1425
PceI	AGGCCT	2 cut(s)	679, 1981
PciI	ACATGT	1 cut(s)	732
PctI	GAATGC	3 cut(s)	1121, 1353, 2049
PfeI	GAWTC	8 cut(s)	380, 942, 1477, 1649, 1714, 1997, 2210, 2249
PflFI	GACNNNGTC	1 cut(s)	2262
PflMI	CCANNNNNTGG	1 cut(s)	644
PfoI	TCCNGGA	1 cut(s)	2254
PkrI	GCNGC	8 cut(s)	113, 1019, 1193, 1828, 2282, 2285, 2355, 2459
Ple19I	CGATCG	1 cut(s)	802
PleI	GAGTC	1 cut(s)	251
PluTI	GGCGCC	1 cut(s)	2336
PpsI	GAGTC	1 cut(s)	251
PpuMI	RGGWCCY	1 cut(s)	2571
PscI	ACATGT	1 cut(s)	732
PshAI	GACNNNNGTC	1 cut(s)	540
PsiI	TTATAA	2 cut(s)	1892, 2117
Psp1406I	AACGTT	1 cut(s)	1597
Psp5II	RGGWCCY	1 cut(s)	2571
Psp6I	CCWGG	8 cut(s)	160, 544, 1020, 1245, 1539, 1652, 2158, 2373
PspFI	CCCAGC	1 cut(s)	145
PspGI	CCWGG	8 cut(s)	160, 544, 1020, 1245, 1539, 1652, 2158, 2373
PspN4I	GGNNCC	5 cut(s)	784, 1815, 2334, 2572, 2573
PspPI	GGNCC	3 cut(s)	635, 2571, 2587
PspPPI	RGGWCCY	1 cut(s)	2571
PsuI	RGATCY	3 cut(s)	859, 1249, 1675
PsyI	GACNNNGTC	1 cut(s)	2262
PvuI	CGATCG	1 cut(s)	802
RgaI	GCGATCGC	1 cut(s)	802
RsaI	GTAC	8 cut(s)	31, 197, 361, 369, 728, 737, 852, 2519
RsaNI	GTAC	8 cut(s)	30, 196, 360, 368, 727, 736, 851, 2518
RseI	CAYNNNNRTG	2 cut(s)	991, 1262
SalI	GTCGAC	2 cut(s)	2301, 2389
SaqAI	TTAA	7 cut(s)	213, 501, 776, 1416, 1437, 1751, 2602
SatI	GCNGC	8 cut(s)	112, 1018, 1192, 1827, 2281, 2284, 2354, 2458
Sau96I	GGNCC	3 cut(s)	635, 2571, 2587
ScaI	AGTACT	1 cut(s)	31
SchI	GAGTC	1 cut(s)	251
SexAI	ACCWGGT	1 cut(s)	2158
SfaAI	GCGATCGC	1 cut(s)	802
SfaNI	GCATC	9 cut(s)	87, 230, 674, 854, 1063, 1228, 2114, 2327, 2497
SfoI	GGCGCC	1 cut(s)	2334
Sfr274I	CTCGAG	1 cut(s)	2238
SfuI	TTCGAA	3 cut(s)	745, 1261, 2232
SgfI	GCGATCGC	1 cut(s)	802
SinI	GGWCC	1 cut(s)	2571
SlaI	CTCGAG	1 cut(s)	2238
SmiMI	CAYNNNNRTG	2 cut(s)	991, 1262
SmlI	CTYRAG	1 cut(s)	2238
SmoI	CTYRAG	1 cut(s)	2238
SpeI	ACTAGT	1 cut(s)	32
SseBI	AGGCCT	2 cut(s)	679, 1981
SsiI	CCGC	6 cut(s)	2354, 2403, 2432, 2457, 2493, 2546
SspDI	GGCGCC	1 cut(s)	2332
SspI	AATATT	1 cut(s)	1749
SspMI	CTAG	4 cut(s)	33, 855, 1217, 1743
StuI	AGGCCT	2 cut(s)	679, 1981
StyI	CCWWGG	3 cut(s)	117, 638, 1408
TaaI	ACNGT	6 cut(s)	58, 220, 917, 1142, 1581, 2395
TaiI	ACGT	3 cut(s)	1600, 2047, 2455
TaqII	GACCGA	3 cut(s)	992, 2320, 2360
TatI	WGTACW	5 cut(s)	29, 359, 726, 735, 2517
TauI	GCSGC	2 cut(s)	2356, 2460
TfiI	GAWTC	8 cut(s)	380, 942, 1477, 1649, 1714, 1997, 2210, 2249
Tru1I	TTAA	7 cut(s)	213, 501, 776, 1416, 1437, 1751, 2602
Tru9I	TTAA	7 cut(s)	213, 501, 776, 1416, 1437, 1751, 2602
TscAI	CASTG	3 cut(s)	664, 1341, 2400
TseFI	GTSAC	5 cut(s)	83, 406, 911, 954, 984
TseI	GCWGC	6 cut(s)	111, 1017, 1191, 1826, 2280, 2283
Tsp45I	GTSAC	5 cut(s)	83, 406, 911, 954, 984
TspGWI	ACGGA	1 cut(s)	89
TspRI	CASTG	3 cut(s)	664, 1341, 2400
Tth111I	GACNNNGTC	1 cut(s)	2262
Van91I	CCANNNNNTGG	1 cut(s)	644
VpaK11BI	GGWCC	1 cut(s)	2571
XagI	CCTNNNNNAGG	1 cut(s)	2199
XapI	RAATTY	6 cut(s)	189, 526, 551, 653, 970, 1722
XceI	RCATGY	3 cut(s)	736, 1528, 2019
XcmI	CCANNNNNNNNNTGG	4 cut(s)	656, 1537, 1610, 1943
XhoI	CTCGAG	1 cut(s)	2238
XmiI	GTMKAC	3 cut(s)	934, 2302, 2390
XspI	CTAG	4 cut(s)	33, 855, 1217, 1743
ZrmI	AGTACT	1 cut(s)	31
Zsp2I	ATGCAT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.