Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Forward (+)

11871220 .. 11874969

Gene Structure 3750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G195000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGGGTGGTCTTTGTTTTCTGCTTATTAGTACTAATTTGCTCTTTCTGTTTTTCACAATTTCCTCTGCAGTTGACATCATTAGCCCCTCGCAGTCTATCAGTGACAACACGACGTTGGTTTCTAGTGATGGAAGCTTTGAGCTTGGTTTCTTCAGTCCTGGTAGCTCCACGAATCGTTACTTGGGAATTTGGTACAAGAACATGAACATCCCAGGTAGAACTGTTGTTTGGGTTGCAAACAGATGCAACCCCATTAATGATTCTTCCGGCATGTTGATGATAAACAGCACAGGCAATCTTGTGCTGTTTGGTCAGAACAAGAGTGTTGTTTGGTCCACAAGCTCAGTTAAACGTGTTGAAAATGCAATGGTACAGCTTTTAGATTCTGGAAATTTGGTAGTAAGAGATGTGAAAGATGGAATTTCAGGACCCTATTTGTGGCAAAGTTTCGACTATCCTTCTGATACGTTGTTACCAGGAATGAAGTTGGGATGGGACTTAAGGACGGGTCTGAAACGACACATATCGGCATGGAAAAACTCAGAAGATCCCTGTCCAGGCAATTTCACGTATGGGATTGAAATGGAACTTCAAGCATACCCTGAGGCATATATTCGCAATGGCACTGCGAAAATTTATCGTGCCAGTCCGTTTAATGGCCTCACTTTCTGTGGTTCATCAGAGAAACATCCTGCTCGTTACGGTTTCAACTTTGTGTACAATGATGATGAAGTGTACTACATGTACAAACCTACCATTAAGTCTATAACCTCAAGAATAGTTTTGAACCAAACCACCAGTTCATGTATTCGGTTTCATTGGAAGAAAGAAGATGAAGCTTGGACTGCCCATTTATCAAGACCTAGAGATGTGTGTGATCATTATGGCTTCTGTGGAGCGAATGGAAATTGTATTGGTGAGAATCCAGTCTGCCAATGTCTAAAGGGATTCAAGCCTAAGTCTCAAGGAAAATGGAATTTGGCGGACTGGTCTCTAGGATGTGTGCGCAATAAACCCTTGAGCTGTCAGAAAACAGATAAAGATGGGTTTCTCAAATTCGTTGGCTTGAAATTGCCAGATACTACACATTCTTGGGTGAACAAAAGTATGAATCTCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCTTGTATGGCTTATAGAAGCTCAGATATCAGAGGAGGTACTGGCTGTGCCATCTGGTTTGGTGATCTAATAGATACCACACAGGCTCTGACTTCTGGGCAGGAAATATATATTCGAATGTCAGCTTCGGAGTTAGAAGAAAATGACAGTAAGCTGAAGACTGCATTGATAGTTGTAGCTGTCATAGCAGTAGTGTTTTCTGGAGTGCTGTTAGTTGCCTATTACATTCACCGGAGAAGGAAAAAATTGAAGGAAATCAGAGACAGAAATCAGGACAATGAAGGGGCACCAAATGAGGACCTGGAGCTCCCGCTCTTCGAATTGGCCACTGTAATTAGTGCCACAGATAACTTTTCAAGCAATAACAAGCTGGGAGAAGGTGGCTTTGGACCGGTTTACAAGGGGACGCTAGCAGGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCTGGCCAAGGAATGAACGAGTTCATGAATGAAGTTATACTGATTGCCAAACTTCAGCACCGAAATCTGGTAAAACTTCTTGGTTGCTGCGTTCAAGGAGACGAGAAAATGCTGATCTATGAATACATGCCCAACGGAAGCCTGGACTCATTCATCTTCGATCAAACGAGCGGAGAACTACTGTTAGATTGGCCTAAACGTTACCACATTATTTGTGGAATTGCTCGTGGTCTCCTCTATCTGCACCAAGATTCCAGGCTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTCCTACTTGATAATGAAATGAATCCAAAAATTTCAGACTTTGGCTTGGCTCGAACATTGACTGGGGGAAATCAGACTGGAGGAAATACAAACAGAGTGGTTGGAACATACGGTTACATGGCACCCGAGTATGTTATTGACGGTCTATTTTCTGTAAAGTCTGATGTCTTTAGCTTTGGTGTTTTGGTGCTGGAGGTCATTAGTGGAAGGAAAAACAAGGGATTCTACCATCCAACCAGCCCTAACCTTATTGGACATGCATGGAGATTATGGAATGAAGGAAGGCATTTAGAACTGATTGATACATATTTAGGAAGTGTATCTACTCTATCAGAAATGTCGCGTTGCATCCATGTTAGTCTCTTGTGTGTGCAGCATCATCCTGAGGACAGGCCAAGCATGGCGTCTGTGGTTATAATGCTGGGAAGTGAGATGGCTTTGGCTCAGCCCAAACAACCTGGTTTCTTCATGGAAAGGGAATCACAAGAAGCAGGTCATTCTTCAGAAAATCAATCATCTTCAGCCAACGAATTATCCATTACGGTTTTGGAGGCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

819

Amino Acids

91.11

Weight (kDa)

7.73

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2312
AarI	CACCTGC	1 cut(s)	1553
Acc16I	TGCGCA	1 cut(s)	1007
Acc36I	ACCTGC	2 cut(s)	1553, 2378
AccB1I	GGYRCC	2 cut(s)	1435, 2017
AccBSI	CCGCTC	2 cut(s)	1462, 1773
AccII	CGCG	1 cut(s)	2239
AciI	CCGC	3 cut(s)	983, 1460, 1773
AclI	AACGTT	1 cut(s)	1801
AclWI	GGATC	1 cut(s)	542
AcoI	YGGCCR	2 cut(s)	1473, 1606
AcsI	RAATTY	7 cut(s)	186, 391, 420, 633, 976, 1055, 1926
AcuI	CTGAAG	5 cut(s)	136, 1325, 1640, 2382, 2400
AcyI	GRCGYC	1 cut(s)	2300
AfaI	GTAC	7 cut(s)	31, 194, 372, 719, 737, 746, 1189
AfiI	CCNNNNNNNGG	5 cut(s)	438, 557, 656, 1669, 1863
AflII	CTTAAG	1 cut(s)	499
AflIII	ACRYGT	2 cut(s)	352, 741
AgeI	ACCGGT	1 cut(s)	1540
AjnI	CCWGG	8 cut(s)	157, 211, 475, 556, 1449, 1743, 1856, 2353
AjuI	GAANNNNNNNTTGG	6 cut(s)	164, 196, 211, 243, 1518, 1550
Alw21I	GWGCWC	1 cut(s)	1458
Alw26I	GTCTC	6 cut(s)	966, 996, 1404, 1695, 1838, 2261
AlwI	GGATC	1 cut(s)	542
AlwNI	CAGNNNCTG	1 cut(s)	1237
Ama87I	CYCGRG	1 cut(s)	2021
AoxI	GGCC	5 cut(s)	658, 1473, 1606, 1793, 2288
ApeKI	GCWGC	2 cut(s)	1689, 2269
ApoI	RAATTY	7 cut(s)	186, 391, 420, 633, 976, 1055, 1926
AseI	ATTAAT	1 cut(s)	255
AsiGI	ACCGGT	1 cut(s)	1540
Asp700I	GAANNNNTTC	1 cut(s)	1622
AspLEI	GCGC	1 cut(s)	1008
AspS9I	GGNCC	4 cut(s)	333, 428, 1447, 1538
AsuHPI	GGTGA	4 cut(s)	929, 1108, 1223, 1370
AsuII	TTCGAA	2 cut(s)	1264, 1467
AsuNHI	GCTAGC	1 cut(s)	1558
AvaI	CYCGRG	1 cut(s)	2021
AvaII	GGWCC	4 cut(s)	333, 428, 1447, 1538
AxyI	CCTNAGG	2 cut(s)	603, 2280
BaeGI	GKGCMC	1 cut(s)	1438
BalI	TGGCCA	2 cut(s)	1475, 1608
BanI	GGYRCC	2 cut(s)	1435, 2017
BanII	GRGCYC	1 cut(s)	1458
BarI	GAAGNNNNNNTAC	2 cut(s)	2203, 2235
BauI	CACGAG	1 cut(s)	1827
BbsI	GAAGAC	1 cut(s)	1313
Bbv12I	GWGCWC	1 cut(s)	1458
BbvI	GCAGC	2 cut(s)	1676, 2281
BccI	CCATC	7 cut(s)	122, 410, 486, 1037, 1208, 2133, 2323
BciT130I	CCWGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
BclI	TGATCA	1 cut(s)	877
BcoDI	GTCTC	6 cut(s)	966, 996, 1404, 1695, 1838, 2261
BfaI	CTAG	4 cut(s)	123, 864, 995, 1559
BfmI	CTRYAG	1 cut(s)	66
BfrI	CTTAAG	1 cut(s)	499
BfuAI	ACCTGC	2 cut(s)	1553, 2378
BglII	AGATCT	1 cut(s)	1879
BisI	GCNGC	2 cut(s)	1690, 2270
BlpI	GCTNAGC	1 cut(s)	2340
BlsI	GCNGC	2 cut(s)	1691, 2271
BmcAI	AGTACT	1 cut(s)	31
Bme1390I	CCNGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
Bme18I	GGWCC	4 cut(s)	333, 428, 1447, 1538
BmeT110I	CYCGRG	1 cut(s)	2021
BmgT120I	GGNCC	4 cut(s)	333, 428, 1447, 1538
BmiI	GGNNCC	3 cut(s)	430, 1437, 2019
BmrFI	CCNGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
BmrI	ACTGGG	1 cut(s)	1968
BmsI	GCATC	3 cut(s)	233, 2253, 2281
BmtI	GCTAGC	1 cut(s)	1562
BmuI	ACTGGG	1 cut(s)	1968
BpiI	GAAGAC	1 cut(s)	1313
BpmI	CTGGAG	4 cut(s)	1371, 1472, 1995, 2108
Bpu10I	CCTNAGC	1 cut(s)	1862
Bpu1102I	GCTNAGC	1 cut(s)	2340
Bpu14I	TTCGAA	2 cut(s)	1264, 1467
BpuEI	CTTGAG	4 cut(s)	757, 948, 1039, 1100
BsaAI	YACGTR	1 cut(s)	570
BsaHI	GRCGYC	1 cut(s)	2300
BsaI	GGTCTC	2 cut(s)	996, 1838
BsaJI	CCNNGG	2 cut(s)	211, 1609
BsaWI	WCCGGW	2 cut(s)	1380, 1540
Bsc4I	CCNNNNNNNGG	5 cut(s)	438, 557, 656, 1669, 1863
Bse118I	RCCGGY	1 cut(s)	1540
Bse1I	ACTGG	7 cut(s)	645, 798, 926, 992, 1195, 1963, 1978
Bse21I	CCTNAGG	2 cut(s)	603, 2280
Bse3DI	GCAATG	2 cut(s)	372, 625
BseBI	CCWGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
BseDI	CCNNGG	2 cut(s)	211, 1609
BseGI	GGATG	7 cut(s)	207, 497, 688, 1004, 2125, 2244, 2275
BseLI	CCNNNNNNNGG	5 cut(s)	438, 557, 656, 1669, 1863
BseMI	GCAATG	2 cut(s)	372, 625
BseMII	CTCAG	6 cut(s)	357, 555, 594, 1185, 2271, 2354
BseNI	ACTGG	7 cut(s)	645, 798, 926, 992, 1195, 1963, 1978
BseRI	GAGGAG	2 cut(s)	1197, 1826
BseSI	GKGCMC	1 cut(s)	1438
BseXI	GCAGC	2 cut(s)	1676, 2281
BseYI	CCCAGC	2 cut(s)	1519, 2317
BsgI	GTGCAG	2 cut(s)	1829, 2288
Bsh1236I	CGCG	1 cut(s)	2239
BshFI	GGCC	5 cut(s)	660, 1475, 1608, 1795, 2290
BshNI	GGYRCC	2 cut(s)	1435, 2017
BshTI	ACCGGT	1 cut(s)	1540
BsiHKAI	GWGCWC	1 cut(s)	1458
BsiHKCI	CYCGRG	1 cut(s)	2021
BsiSI	CCGG	3 cut(s)	267, 1381, 1541
BslFI	GGGAC	2 cut(s)	509, 1567
BslI	CCNNNNNNNGG	5 cut(s)	438, 557, 656, 1669, 1863
BsmAI	GTCTC	6 cut(s)	966, 996, 1404, 1695, 1838, 2261
BsmBI	CGTCTC	1 cut(s)	1695
BsmFI	GGGAC	2 cut(s)	509, 1567
BsmI	GAATGC	1 cut(s)	1127
BsnI	GGCC	5 cut(s)	660, 1475, 1608, 1795, 2290
Bso31I	GGTCTC	2 cut(s)	996, 1838
BsoBI	CYCGRG	1 cut(s)	2021
Bsp119I	TTCGAA	2 cut(s)	1264, 1467
Bsp1286I	GDGCHC	2 cut(s)	1438, 1458
Bsp1407I	TGTACA	2 cut(s)	717, 744
Bsp143I	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
Bsp1720I	GCTNAGC	1 cut(s)	2340
BspACI	CCGC	3 cut(s)	983, 1460, 1773
BspANI	GGCC	5 cut(s)	660, 1475, 1608, 1795, 2290
BspCNI	CTCAG	6 cut(s)	356, 554, 595, 1184, 2272, 2353
BspFNI	CGCG	1 cut(s)	2239
BspHI	TCATGA	1 cut(s)	1626
BspLI	GGNNCC	3 cut(s)	430, 1437, 2019
BspMAI	CTGCAG	1 cut(s)	70
BspMI	ACCTGC	2 cut(s)	1553, 2378
BspOI	GCTAGC	1 cut(s)	1562
BspPI	GGATC	1 cut(s)	542
BspQI	GCTCTTC	1 cut(s)	1469
BspT104I	TTCGAA	2 cut(s)	1264, 1467
BspT107I	GGYRCC	2 cut(s)	1435, 2017
BspTI	CTTAAG	1 cut(s)	499
BspTNI	GGTCTC	2 cut(s)	996, 1838
BsrBI	CCGCTC	2 cut(s)	1462, 1773
BsrDI	GCAATG	2 cut(s)	372, 625
BsrFI	RCCGGY	1 cut(s)	1540
BsrGI	TGTACA	2 cut(s)	717, 744
BsrI	ACTGG	7 cut(s)	645, 798, 926, 992, 1195, 1963, 1978
BssAI	RCCGGY	1 cut(s)	1540
BssECI	CCNNGG	2 cut(s)	211, 1609
BssMI	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
BssNI	GRCGYC	1 cut(s)	2300
BssSI	CACGAG	1 cut(s)	1827
BssT1I	CCWWGG	1 cut(s)	1609
Bst2BI	CACGAG	1 cut(s)	1827
Bst2UI	CCWGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
Bst4CI	ACNGT	9 cut(s)	223, 704, 1148, 1298, 1480, 1785, 2009, 2039, 2440
Bst6I	CTCTTC	2 cut(s)	1469, 1580
BstACI	GRCGYC	1 cut(s)	2300
BstAFI	CTTAAG	1 cut(s)	499
BstAUI	TGTACA	2 cut(s)	717, 744
BstBAI	YACGTR	1 cut(s)	570
BstBI	TTCGAA	2 cut(s)	1264, 1467
BstC8I	GCNNGC	1 cut(s)	1560
BstDEI	CTNAG	8 cut(s)	343, 541, 603, 957, 1171, 1862, 2280, 2340
BstF5I	GGATG	7 cut(s)	207, 497, 688, 1004, 2125, 2244, 2275
BstFNI	CGCG	1 cut(s)	2239
BstHHI	GCGC	1 cut(s)	1008
BstKTI	GATC	6 cut(s)	550, 880, 1216, 1719, 1765, 1882
BstMAI	GTCTC	6 cut(s)	966, 996, 1404, 1695, 1838, 2261
BstMBI	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
BstMWI	GCNNNNNNNGC	2 cut(s)	845, 1334
BstNI	CCWGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
BstNSI	RCATGY	4 cut(s)	274, 745, 1732, 2156
BstSCI	CCNGG	8 cut(s)	157, 211, 475, 556, 1449, 1743, 1856, 2353
BstSFI	CTRYAG	1 cut(s)	66
BstSLI	GKGCMC	1 cut(s)	1438
BstUI	CGCG	1 cut(s)	2239
BstV1I	GCAGC	2 cut(s)	1676, 2281
BstV2I	GAAGAC	1 cut(s)	1313
BstX2I	RGATCY	2 cut(s)	547, 1879
BstYI	RGATCY	2 cut(s)	547, 1879
Bsu36I	CCTNAGG	2 cut(s)	603, 2280
BsuRI	GGCC	5 cut(s)	660, 1475, 1608, 1795, 2290
BtsCI	GGATG	7 cut(s)	207, 497, 688, 1004, 2125, 2244, 2275
BtsI	GCAGTG	1 cut(s)	624
BtsIMutI	CAGTG	3 cut(s)	106, 624, 1476
BveI	ACCTGC	2 cut(s)	1553, 2378
Cac8I	GCNNGC	1 cut(s)	1560
CaiI	CAGNNNCTG	1 cut(s)	1237
CciI	TCATGA	1 cut(s)	1626
CfoI	GCGC	1 cut(s)	1008
Cfr10I	RCCGGY	1 cut(s)	1540
Cfr13I	GGNCC	4 cut(s)	333, 428, 1447, 1538
CseI	GACGC	2 cut(s)	1564, 2289
CsiI	ACCWGGT	1 cut(s)	2353
Csp6I	GTAC	7 cut(s)	30, 193, 371, 718, 736, 745, 1188
CspAI	ACCGGT	1 cut(s)	1540
CspCI	CAANNNNNGTGG	4 cut(s)	1796, 1831, 1974, 2009
CviQI	GTAC	7 cut(s)	30, 193, 371, 718, 736, 745, 1188
DdeI	CTNAG	8 cut(s)	343, 541, 603, 957, 1171, 1862, 2280, 2340
DpnI	GATC	6 cut(s)	549, 879, 1215, 1718, 1764, 1881
DpnII	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
EaeI	YGGCCR	2 cut(s)	1473, 1606
Eam1104I	CTCTTC	2 cut(s)	1469, 1580
EarI	CTCTTC	2 cut(s)	1469, 1580
EciI	GGCGGA	1 cut(s)	998
Ecl136II	GAGCTC	1 cut(s)	1456
Eco130I	CCWWGG	1 cut(s)	1609
Eco24I	GRGCYC	1 cut(s)	1458
Eco31I	GGTCTC	2 cut(s)	996, 1838
Eco32I	GATATC	1 cut(s)	1177
Eco47I	GGWCC	4 cut(s)	333, 428, 1447, 1538
Eco53kI	GAGCTC	1 cut(s)	1456
Eco57I	CTGAAG	5 cut(s)	136, 1325, 1640, 2382, 2400
Eco81I	CCTNAGG	2 cut(s)	603, 2280
Eco88I	CYCGRG	1 cut(s)	2021
EcoICRI	GAGCTC	1 cut(s)	1456
EcoO109I	RGGNCCY	2 cut(s)	428, 1447
EcoRII	CCWGG	8 cut(s)	157, 211, 475, 556, 1449, 1743, 1856, 2353
EcoRV	GATATC	1 cut(s)	1177
EcoT14I	CCWWGG	1 cut(s)	1609
EcoT22I	ATGCAT	1 cut(s)	2158
EcoT38I	GRGCYC	1 cut(s)	1458
ErhI	CCWWGG	1 cut(s)	1609
Esp3I	CGTCTC	1 cut(s)	1695
FaqI	GGGAC	2 cut(s)	509, 1567
FauI	CCCGC	1 cut(s)	1467
FbaI	TGATCA	1 cut(s)	877
Fnu4HI	GCNGC	2 cut(s)	1690, 2270
FokI	GGATG	7 cut(s)	194, 504, 675, 1011, 2112, 2231, 2262
FriOI	GRGCYC	1 cut(s)	1458
Fsp4HI	GCNGC	2 cut(s)	1690, 2270
FspBI	CTAG	4 cut(s)	123, 864, 995, 1559
FspI	TGCGCA	1 cut(s)	1007
GlaI	GCGC	1 cut(s)	1007
GluI	GCNGC	2 cut(s)	1690, 2270
GsaI	CCCAGC	2 cut(s)	1523, 2321
GsuI	CTGGAG	4 cut(s)	1371, 1472, 1995, 2108
HaeIII	GGCC	5 cut(s)	660, 1475, 1608, 1795, 2290
HapII	CCGG	3 cut(s)	267, 1381, 1541
HgaI	GACGC	2 cut(s)	1564, 2289
HhaI	GCGC	1 cut(s)	1008
Hin1I	GRCGYC	1 cut(s)	2300
Hin6I	GCGC	1 cut(s)	1006
HinP1I	GCGC	1 cut(s)	1006
HincII	GTYRAC	1 cut(s)	73
HindII	GTYRAC	1 cut(s)	73
HindIII	AAGCTT	2 cut(s)	133, 837
HpaII	CCGG	3 cut(s)	267, 1381, 1541
HphI	GGTGA	4 cut(s)	929, 1108, 1223, 1370
Hpy166II	GTNNAC	7 cut(s)	73, 336, 718, 736, 1099, 1546, 1568
Hpy188III	TCNNGA	9 cut(s)	387, 426, 774, 858, 1350, 1421, 1596, 1627, 2279
Hpy8I	GTNNAC	7 cut(s)	73, 336, 718, 736, 1099, 1546, 1568
Hpy99I	CGWCG	1 cut(s)	115
HpyAV	CCTTC	8 cut(s)	468, 1380, 1393, 1424, 1520, 2097, 2168, 2172
HpyCH4III	ACNGT	9 cut(s)	223, 704, 1148, 1298, 1480, 1785, 2009, 2039, 2440
HpyCH4IV	ACGT	5 cut(s)	113, 352, 467, 569, 1801
HpyF10VI	GCNNNNNNNGC	2 cut(s)	845, 1334
HpyF3I	CTNAG	8 cut(s)	343, 541, 603, 957, 1171, 1862, 2280, 2340
HpySE526I	ACGT	5 cut(s)	113, 352, 467, 569, 1801
Hsp92I	GRCGYC	1 cut(s)	2300
HspAI	GCGC	1 cut(s)	1006
Ksp22I	TGATCA	1 cut(s)	877
Kzo9I	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
LguI	GCTCTTC	1 cut(s)	1469
LmnI	GCTCC	4 cut(s)	170, 896, 1453, 1461
Lsp1109I	GCAGC	2 cut(s)	1676, 2281
LweI	GCATC	3 cut(s)	233, 2253, 2281
MabI	ACCWGGT	1 cut(s)	2353
MaeI	CTAG	4 cut(s)	123, 864, 995, 1559
MaeII	ACGT	5 cut(s)	113, 352, 467, 569, 1801
MaeIII	GTNAC	6 cut(s)	101, 176, 471, 698, 1802, 2009
MalI	GATC	6 cut(s)	549, 879, 1215, 1718, 1764, 1881
MbiI	CCGCTC	2 cut(s)	1462, 1773
MboI	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
MflI	RGATCY	2 cut(s)	547, 1879
MhlI	GDGCHC	2 cut(s)	1438, 1458
MlsI	TGGCCA	2 cut(s)	1475, 1608
MluNI	TGGCCA	2 cut(s)	1475, 1608
MlyI	GAGTC	1 cut(s)	1742
MmeI	TCCRAC	2 cut(s)	1978, 2153
Mox20I	TGGCCA	2 cut(s)	1475, 1608
Mph1103I	ATGCAT	1 cut(s)	2158
MroXI	GAANNNNTTC	1 cut(s)	1622
MscI	TGGCCA	2 cut(s)	1475, 1608
MseI	TTAA	5 cut(s)	255, 348, 500, 654, 759
MslI	CAYNNNNRTG	1 cut(s)	275
Msp20I	TGGCCA	2 cut(s)	1475, 1608
MspCI	CTTAAG	1 cut(s)	499
MspI	CCGG	3 cut(s)	267, 1381, 1541
MspR9I	CCNGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
Mva1269I	GAATGC	1 cut(s)	1127
MvaI	CCWGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
MvnI	CGCG	1 cut(s)	2239
MwoI	GCNNNNNNNGC	2 cut(s)	845, 1334
NdeII	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
NheI	GCTAGC	1 cut(s)	1558
NlaIV	GGNNCC	3 cut(s)	430, 1437, 2019
NmuCI	GTSAC	1 cut(s)	101
NsbI	TGCGCA	1 cut(s)	1007
NsiI	ATGCAT	1 cut(s)	2158
NspI	RCATGY	4 cut(s)	274, 745, 1732, 2156
NspV	TTCGAA	2 cut(s)	1264, 1467
PagI	TCATGA	1 cut(s)	1626
PaqCI	CACCTGC	1 cut(s)	1553
PciI	ACATGT	1 cut(s)	741
PciSI	GCTCTTC	1 cut(s)	1469
PctI	GAATGC	1 cut(s)	1127
PdmI	GAANNNNTTC	1 cut(s)	1622
PinAI	ACCGGT	1 cut(s)	1540
PkrI	GCNGC	2 cut(s)	1691, 2271
PleI	GAGTC	1 cut(s)	1742
PpsI	GAGTC	1 cut(s)	1742
Ppu21I	YACGTR	1 cut(s)	570
PpuMI	RGGWCCY	2 cut(s)	428, 1447
PscI	ACATGT	1 cut(s)	741
PshBI	ATTAAT	1 cut(s)	255
PsiI	TTATAA	1 cut(s)	2312
Psp124BI	GAGCTC	1 cut(s)	1458
Psp1406I	AACGTT	1 cut(s)	1801
Psp5II	RGGWCCY	2 cut(s)	428, 1447
Psp6I	CCWGG	8 cut(s)	157, 211, 475, 556, 1449, 1743, 1856, 2353
PspFI	CCCAGC	2 cut(s)	1519, 2317
PspGI	CCWGG	8 cut(s)	157, 211, 475, 556, 1449, 1743, 1856, 2353
PspN4I	GGNNCC	3 cut(s)	430, 1437, 2019
PspPI	GGNCC	4 cut(s)	333, 428, 1447, 1538
PspPPI	RGGWCCY	2 cut(s)	428, 1447
PstI	CTGCAG	1 cut(s)	70
PstNI	CAGNNNCTG	1 cut(s)	1237
PsuI	RGATCY	2 cut(s)	547, 1879
RsaI	GTAC	7 cut(s)	31, 194, 372, 719, 737, 746, 1189
RsaNI	GTAC	7 cut(s)	30, 193, 371, 718, 736, 745, 1188
RseI	CAYNNNNRTG	1 cut(s)	275
SacI	GAGCTC	1 cut(s)	1458
SapI	GCTCTTC	1 cut(s)	1469
SaqAI	TTAA	5 cut(s)	255, 348, 500, 654, 759
SatI	GCNGC	2 cut(s)	1690, 2270
Sau3AI	GATC	6 cut(s)	547, 877, 1213, 1716, 1762, 1879
Sau96I	GGNCC	4 cut(s)	333, 428, 1447, 1538
ScaI	AGTACT	1 cut(s)	31
SchI	GAGTC	1 cut(s)	1742
ScrFI	CCNGG	8 cut(s)	159, 213, 477, 558, 1451, 1745, 1858, 2355
SduI	GDGCHC	2 cut(s)	1438, 1458
SexAI	ACCWGGT	1 cut(s)	2353
SfaNI	GCATC	3 cut(s)	233, 2253, 2281
SfcI	CTRYAG	1 cut(s)	66
SfuI	TTCGAA	2 cut(s)	1264, 1467
SinI	GGWCC	4 cut(s)	333, 428, 1447, 1538
SmiMI	CAYNNNNRTG	1 cut(s)	275
SmlI	CTYRAG	5 cut(s)	499, 772, 963, 1018, 1115
SmoI	CTYRAG	5 cut(s)	499, 772, 963, 1018, 1115
SsiI	CCGC	3 cut(s)	983, 1460, 1773
SspMI	CTAG	4 cut(s)	123, 864, 995, 1559
SstI	GAGCTC	1 cut(s)	1458
StyD4I	CCNGG	8 cut(s)	157, 211, 475, 556, 1449, 1743, 1856, 2353
StyI	CCWWGG	1 cut(s)	1609
TaaI	ACNGT	9 cut(s)	223, 704, 1148, 1298, 1480, 1785, 2009, 2039, 2440
TaiI	ACGT	5 cut(s)	116, 355, 470, 572, 1804
TaqI	TCGA	6 cut(s)	450, 1264, 1467, 1761, 1948, 2452
TatI	WGTACW	4 cut(s)	29, 717, 735, 744
Tru1I	TTAA	5 cut(s)	255, 348, 500, 654, 759
Tru9I	TTAA	5 cut(s)	255, 348, 500, 654, 759
TscAI	CASTG	3 cut(s)	106, 631, 1483
TseFI	GTSAC	1 cut(s)	101
TseI	GCWGC	2 cut(s)	1689, 2269
Tsp45I	GTSAC	1 cut(s)	101
TspGWI	ACGGA	2 cut(s)	639, 1752
TspRI	CASTG	3 cut(s)	106, 631, 1483
Vha464I	CTTAAG	1 cut(s)	499
VpaK11BI	GGWCC	4 cut(s)	333, 428, 1447, 1538
VspI	ATTAAT	1 cut(s)	255
XapI	RAATTY	7 cut(s)	186, 391, 420, 633, 976, 1055, 1926
XceI	RCATGY	4 cut(s)	274, 745, 1732, 2156
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1741, 1814, 2440
XmnI	GAANNNNTTC	1 cut(s)	1622
XspI	CTAG	4 cut(s)	123, 864, 995, 1559
ZrmI	AGTACT	1 cut(s)	31
Zsp2I	ATGCAT	1 cut(s)	2158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.