Rh5DG259900

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000207
Physical Location & Seq
Forward (+)
31051006 .. 31052581
1576 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG259900.1

Sequence Viewer

Length: 1401 bp
ATGAAGAACCTCTGCTTCATTCTTCTCTGCATCTGTTTCAGCAAACTTTCATCTGCAGCTGATACCCTTTCTTCATCTCAGAACATCACTGATGGCAACTCCTTGGTTTCCCCAGGTGGAGTATTTCAACTGGGTTTCTTCAGCCCCGGCAGTTCCAAATCCCGCTACTTGGGGATTTGGTACAAGAACATCTCAGTCCAAACCGTCGTTTGGGTTGCGAATCGAGGCACCCCGATCAACGACTCCTCAGGCCATTTGATGATCAACACCACCACAGGGGCTCTAGTTCTTCTCAACAACAACAAGACCGTTTTTTGGTCATCAAATTCGACGAAACAAACCCAGAATATTAGTCCTGTCGTTCAGTTACTAGACAATGGCAATCTTATTCTCAGAGACGAGAAAGAAGGAGCAAACTCCGAAAGCTATCTGTGGCAAAGCTTCGACTATCCGTCGGATACTTTGTTACCGGGGATGAAGCTGGGATGGGACTTCAGAACCGGGCTGAACCGGAGACTGACGGCGTGGAAGAGTCCAGATGACCCTTCTCCTGGAGACTTCATATGGGAGATGCAGCTGCATAACTATCCTGAGCCAGCTATGTTCAGAGCGGGCAAAGAGTTTTTGAGGAGTGGTCCGTGGAATGGTGTTTTATTCAGTGGAAAACCGGCAAAGGCGCTACCGGCATTGAACTTCAGCTTCTTCATGGATGAGAATGAGGTTTACACAACAATTGGAATGGTGGACAAGTCAGCATTAGGGAGGATGATGCTGAATTTAACTGCAGATTACTACCGCCAGTCGTGGATTTGGTCTGAAGCAGACCAAAATTGGACACTCTATGCAGCATTTCCTAGGGATCCTTGTGACAGTTATGCCAAGTGTGGAGGAAATGGAAACTGCATGCTTAGTGAATCCCCGATGTGTCAATGTTTAGACAGGTTCAGACCTAGATCACTGGAGAAGTGGAGCTTAAACAATTTTTCGCTCGGGTGTGAGCGAAAGACGCCATTGAGGTGCAAGAATGATGGATTTGTGACTTATACTGGGTTAAAATTGCCCGATACAACGCATACTTGGATCGATAAAGCTATGAATCTCAAGGAGTGCAGGGCCAAATGCTTGTCTAATTGTTCTTGTTCCGCGTACACAAACTTGGATGTCAGAGGCGGAGGTAGTGGTTGTGCAATCTGGTTTGGTGATCTTGTAGACTTGAAGCAGATTCCGGGTGGTGACCAGGATATTTACATTAAGATCTCTGCTGCAGAACTAGGAGGGAAAGATAAGAAGTGGAAGATAGGAGTGATAGTTGCATCTGCCGTTGCTGTAATTCTTGCGATGTTATTATTTGGCTATTGTTACATTCTCAGACTCAGACGCAGGAAAAGTTTCAAAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

466

Amino Acids

51.99

Weight (kDa)

8.81

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 68 - 177 3.9e-38 D-mannose binding lectin
S_locus_glycop PF00954 210 - 318 4.8e-22 S-locus glycoprotein domain
PAN_2 PF08276 340 - 405 1.1e-22 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 227
AccBSI CCGCTC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 1209
AccII CGCG 1 cut(s) 1145
AciI CCGC 5 cut(s) 163, 611, 796, 1143, 1170
AclWI GGATC 3 cut(s) 854, 867, 1088
AcsI RAATTY 2 cut(s) 325, 775
AcuI CTGAAG 4 cut(s) 124, 478, 679, 837
AcyI GRCGYC 1 cut(s) 1007
AfaI GTAC 2 cut(s) 182, 1148
AfiI CCNNNNNNNGG 6 cut(s) 169, 210, 276, 315, 551, 644
AgsI TTSAA 4 cut(s) 128, 691, 1216, 1393
AhdI GACNNNNNGTC 1 cut(s) 451
AjnI CCWGG 3 cut(s) 112, 550, 1236
AluBI AGCT 9 cut(s) 59, 426, 441, 481, 577, 599, 699, 972, 1091
AluI AGCT 9 cut(s) 59, 426, 441, 481, 577, 599, 699, 972, 1091
Alw26I GTCTC 3 cut(s) 390, 508, 549
AlwI GGATC 3 cut(s) 854, 867, 1088
Ama87I CYCGRG 1 cut(s) 989
AoxI GGCC 2 cut(s) 250, 1113
ApeKI GCWGC 5 cut(s) 56, 574, 577, 845, 1262
ApoI RAATTY 2 cut(s) 325, 775
Asp700I GAANNNNTTC 1 cut(s) 1388
AspA2I CCTAGG 1 cut(s) 854
AspLEI GCGC 1 cut(s) 679
AspS9I GGNCC 2 cut(s) 635, 1113
AsuC2I CCSGG 4 cut(s) 147, 471, 502, 1227
AsuHPI GGTGA 2 cut(s) 1211, 1244
AvaI CYCGRG 1 cut(s) 989
AvaII GGWCC 1 cut(s) 635
AvrII CCTAGG 1 cut(s) 854
AxyI CCTNAGG 1 cut(s) 247
BamHI GGATCC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 283
BbvI GCAGC 5 cut(s) 68, 564, 586, 857, 1249
BccI CCATC 3 cut(s) 86, 480, 1022
BceAI ACGGC 2 cut(s) 537, 1304
BciT130I CCWGG 3 cut(s) 114, 552, 1238
BciVI GTATCC 1 cut(s) 451
BclI TGATCA 1 cut(s) 261
BcnI CCSGG 4 cut(s) 147, 471, 502, 1227
BcoDI GTCTC 3 cut(s) 390, 508, 549
BfaI CTAG 5 cut(s) 284, 371, 855, 951, 1271
BfmI CTRYAG 3 cut(s) 54, 783, 1263
BfoI RGCGCY 1 cut(s) 680
BfuI GTATCC 1 cut(s) 451
BglII AGATCT 1 cut(s) 1254
BisI GCNGC 5 cut(s) 57, 575, 578, 846, 1263
BlnI CCTAGG 1 cut(s) 854
BlsI GCNGC 5 cut(s) 58, 576, 579, 847, 1264
Bme1390I CCNGG 7 cut(s) 114, 147, 471, 502, 552, 1227, 1238
Bme18I GGWCC 1 cut(s) 635
BmeRI GACNNNNNGTC 1 cut(s) 451
BmeT110I CYCGRG 1 cut(s) 989
BmgT120I GGNCC 2 cut(s) 635, 1113
BmiI GGNNCC 2 cut(s) 229, 861
BmrFI CCNGG 7 cut(s) 114, 147, 471, 502, 552, 1227, 1238
BmrI ACTGGG 2 cut(s) 140, 1056
BmsI GCATC 4 cut(s) 39, 561, 759, 1322
BmuI ACTGGG 2 cut(s) 140, 1056
BpmI CTGGAG 2 cut(s) 573, 980
Bpu10I CCTNAGC 1 cut(s) 591
BpuEI CTTGAG 1 cut(s) 1085
BpuMI CCSGG 4 cut(s) 147, 471, 502, 1227
Bsa29I ATCGAT 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 1007
BsaJI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BsaWI WCCGGW 1 cut(s) 510
BsaXI ACNNNNNCTCC 2 cut(s) 1293, 1323
Bsc4I CCNNNNNNNGG 6 cut(s) 169, 210, 276, 315, 551, 644
Bse118I RCCGGY 2 cut(s) 667, 682
Bse1I ACTGG 4 cut(s) 135, 799, 963, 1051
Bse21I CCTNAGG 1 cut(s) 247
BseBI CCWGG 3 cut(s) 114, 552, 1238
BseCI ATCGAT 1 cut(s) 1083
BseDI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BseGI GGATG 5 cut(s) 480, 491, 715, 771, 1165
BseLI CCNNNNNNNGG 6 cut(s) 169, 210, 276, 315, 551, 644
BseMII CTCAG 7 cut(s) 92, 207, 261, 406, 582, 1381, 1387
BseNI ACTGG 4 cut(s) 135, 799, 963, 1051
BseRI GAGGAG 2 cut(s) 235, 643
BseXI GCAGC 5 cut(s) 68, 564, 586, 857, 1249
BseYI CCCAGC 1 cut(s) 481
BsgI GTGCAG 1 cut(s) 1129
Bsh1236I CGCG 1 cut(s) 1145
BshFI GGCC 2 cut(s) 252, 1115
BshNI GGYRCC 1 cut(s) 227
BshVI ATCGAT 1 cut(s) 1083
BsiHKCI CYCGRG 1 cut(s) 989
BsiSI CCGG 7 cut(s) 147, 470, 501, 511, 668, 683, 1226
BslFI GGGAC 1 cut(s) 503
BslI CCNNNNNNNGG 6 cut(s) 169, 210, 276, 315, 551, 644
BsmAI GTCTC 3 cut(s) 390, 508, 549
BsmBI CGTCTC 1 cut(s) 390
BsmFI GGGAC 1 cut(s) 503
BsnI GGCC 2 cut(s) 252, 1115
BsoBI CYCGRG 1 cut(s) 989
Bsp1286I GDGCHC 1 cut(s) 283
Bsp143I GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
BspACI CCGC 5 cut(s) 163, 611, 796, 1143, 1170
BspANI GGCC 2 cut(s) 252, 1115
BspCNI CTCAG 7 cut(s) 91, 206, 260, 405, 583, 1380, 1386
BspDI ATCGAT 1 cut(s) 1083
BspFNI CGCG 1 cut(s) 1145
BspLI GGNNCC 2 cut(s) 229, 861
BspMAI CTGCAG 3 cut(s) 58, 787, 1267
BspPI GGATC 3 cut(s) 854, 867, 1088
BspT107I GGYRCC 1 cut(s) 227
BsrBI CCGCTC 1 cut(s) 611
BsrFI RCCGGY 2 cut(s) 667, 682
BsrI ACTGG 4 cut(s) 135, 799, 963, 1051
BssAI RCCGGY 2 cut(s) 667, 682
BssECI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BssMI GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
BssNI GRCGYC 1 cut(s) 1007
BssT1I CCWWGG 2 cut(s) 102, 854
Bst2UI CCWGG 3 cut(s) 114, 552, 1238
Bst4CI ACNGT 3 cut(s) 205, 310, 872
Bst6I CTCTTC 1 cut(s) 524
BstACI GRCGYC 1 cut(s) 1007
BstC8I GCNNGC 3 cut(s) 597, 613, 905
BstDEI CTNAG 8 cut(s) 78, 193, 247, 392, 591, 908, 1367, 1373
BstDSI CCRYGG 1 cut(s) 638
BstEII GGTNACC 1 cut(s) 1232
BstF5I GGATG 5 cut(s) 480, 491, 715, 771, 1165
BstFNI CGCG 1 cut(s) 1145
BstH2I RGCGCY 1 cut(s) 680
BstHHI GCGC 1 cut(s) 679
BstKTI GATC 7 cut(s) 237, 264, 862, 956, 1083, 1204, 1257
BstMAI GTCTC 3 cut(s) 390, 508, 549
BstMBI GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
BstMWI GCNNNNNNNGC 2 cut(s) 683, 1006
BstNI CCWGG 3 cut(s) 114, 552, 1238
BstNSI RCATGY 1 cut(s) 907
BstPI GGTNACC 1 cut(s) 1232
BstSCI CCNGG 7 cut(s) 112, 145, 469, 500, 550, 1225, 1236
BstSFI CTRYAG 3 cut(s) 54, 783, 1263
BstUI CGCG 1 cut(s) 1145
BstV1I GCAGC 5 cut(s) 68, 564, 586, 857, 1249
BstX2I RGATCY 2 cut(s) 859, 1254
BstYI RGATCY 2 cut(s) 859, 1254
Bsu15I ATCGAT 1 cut(s) 1083
Bsu36I CCTNAGG 1 cut(s) 247
BsuI GTATCC 1 cut(s) 451
BsuRI GGCC 2 cut(s) 252, 1115
BsuTUI ATCGAT 1 cut(s) 1083
BtgI CCRYGG 1 cut(s) 638
BtgZI GCGATG 1 cut(s) 1352
BtsCI GGATG 5 cut(s) 480, 491, 715, 771, 1165
BtsIMutI CAGTG 3 cut(s) 87, 664, 956
Cac8I GCNNGC 3 cut(s) 597, 613, 905
CfoI GCGC 1 cut(s) 679
Cfr10I RCCGGY 2 cut(s) 667, 682
Cfr13I GGNCC 2 cut(s) 635, 1113
ClaI ATCGAT 1 cut(s) 1083
CseI GACGC 2 cut(s) 1015, 1386
Csp6I GTAC 2 cut(s) 181, 1147
CviAII CATG 2 cut(s) 706, 904
CviQI GTAC 2 cut(s) 181, 1147
DdeI CTNAG 8 cut(s) 78, 193, 247, 392, 591, 908, 1367, 1373
DpnI GATC 7 cut(s) 236, 263, 861, 955, 1082, 1203, 1256
DpnII GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
DriI GACNNNNNGTC 1 cut(s) 451
Eam1104I CTCTTC 1 cut(s) 524
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 1 cut(s) 524
EciI GGCGGA 1 cut(s) 1185
Eco130I CCWWGG 2 cut(s) 102, 854
Eco24I GRGCYC 1 cut(s) 283
Eco47I GGWCC 1 cut(s) 635
Eco57I CTGAAG 4 cut(s) 124, 478, 679, 837
Eco81I CCTNAGG 1 cut(s) 247
Eco88I CYCGRG 1 cut(s) 989
Eco91I GGTNACC 1 cut(s) 1232
EcoO65I GGTNACC 1 cut(s) 1232
EcoRII CCWGG 3 cut(s) 112, 550, 1236
EcoT14I CCWWGG 2 cut(s) 102, 854
EcoT38I GRGCYC 1 cut(s) 283
ErhI CCWWGG 2 cut(s) 102, 854
Esp3I CGTCTC 1 cut(s) 390
FaeI CATG 2 cut(s) 709, 907
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 1 cut(s) 503
FatI CATG 2 cut(s) 705, 903
FauI CCCGC 2 cut(s) 170, 604
FauNDI CATATG 1 cut(s) 563
FbaI TGATCA 1 cut(s) 261
FblI GTMKAC 1 cut(s) 1209
Fnu4HI GCNGC 5 cut(s) 57, 575, 578, 846, 1263
FokI GGATG 5 cut(s) 487, 498, 722, 778, 1172
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 5 cut(s) 57, 575, 578, 846, 1263
FspBI CTAG 5 cut(s) 284, 371, 855, 951, 1271
GlaI GCGC 1 cut(s) 678
GluI GCNGC 5 cut(s) 57, 575, 578, 846, 1263
GsaI CCCAGC 1 cut(s) 485
GsuI CTGGAG 2 cut(s) 573, 980
HaeII RGCGCY 1 cut(s) 680
HaeIII GGCC 2 cut(s) 252, 1115
HapII CCGG 7 cut(s) 147, 470, 501, 511, 668, 683, 1226
HgaI GACGC 2 cut(s) 1015, 1386
HhaI GCGC 1 cut(s) 679
Hin1I GRCGYC 1 cut(s) 1007
Hin1II CATG 2 cut(s) 709, 907
Hin6I GCGC 1 cut(s) 677
HinP1I GCGC 1 cut(s) 677
HindIII AAGCTT 1 cut(s) 439
HinfI GANTC 7 cut(s) 220, 242, 532, 914, 1096, 1222, 1371
HpaII CCGG 7 cut(s) 147, 470, 501, 511, 668, 683, 1226
HphI GGTGA 2 cut(s) 1211, 1244
Hpy166II GTNNAC 4 cut(s) 724, 745, 1149, 1210
Hpy188III TCNNGA 2 cut(s) 536, 590
Hpy8I GTNNAC 4 cut(s) 724, 745, 1149, 1210
Hpy99I CGWCG 3 cut(s) 209, 334, 457
HpyAV CCTTC 2 cut(s) 401, 555
HpyCH4III ACNGT 3 cut(s) 205, 310, 872
HpyF10VI GCNNNNNNNGC 2 cut(s) 683, 1006
HpyF3I CTNAG 8 cut(s) 78, 193, 247, 392, 591, 908, 1367, 1373
Hsp92I GRCGYC 1 cut(s) 1007
Hsp92II CATG 2 cut(s) 709, 907
HspAI GCGC 1 cut(s) 677
Ksp22I TGATCA 1 cut(s) 261
Kzo9I GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
LmnI GCTCC 2 cut(s) 410, 969
Lsp1109I GCAGC 5 cut(s) 68, 564, 586, 857, 1249
LweI GCATC 4 cut(s) 39, 561, 759, 1322
MaeI CTAG 5 cut(s) 284, 371, 855, 951, 1271
MaeIII GTNAC 6 cut(s) 366, 465, 866, 1036, 1232, 1358
MalI GATC 7 cut(s) 236, 263, 861, 955, 1082, 1203, 1256
MbiI CCGCTC 1 cut(s) 611
MboI GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
MboII GAAGA 8 cut(s) 14, 16, 63, 130, 281, 541, 694, 1306
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 2 cut(s) 859, 1254
MhlI GDGCHC 1 cut(s) 283
MluCI AATT 8 cut(s) 325, 732, 775, 829, 979, 1055, 1129, 1329
MlyI GAGTC 3 cut(s) 236, 541, 1365
MmeI TCCRAC 1 cut(s) 435
MroXI GAANNNNTTC 1 cut(s) 1388
MseI TTAA 4 cut(s) 779, 974, 1052, 1251
MslI CAYNNNNRTG 1 cut(s) 1015
MspA1I CMGCKG 2 cut(s) 59, 577
MspI CCGG 7 cut(s) 147, 470, 501, 511, 668, 683, 1226
MspR9I CCNGG 7 cut(s) 114, 147, 471, 502, 552, 1227, 1238
MunI CAATTG 1 cut(s) 732
MvaI CCWGG 3 cut(s) 114, 552, 1238
MvnI CGCG 1 cut(s) 1145
MwoI GCNNNNNNNGC 2 cut(s) 683, 1006
NciI CCSGG 4 cut(s) 147, 471, 502, 1227
NdeI CATATG 1 cut(s) 563
NdeII GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
NlaIII CATG 2 cut(s) 709, 907
NlaIV GGNNCC 2 cut(s) 229, 861
NmuCI GTSAC 3 cut(s) 866, 1036, 1232
NspI RCATGY 1 cut(s) 907
PaeI GCATGC 1 cut(s) 907
PdmI GAANNNNTTC 1 cut(s) 1388
PfeI GAWTC 4 cut(s) 220, 914, 1096, 1222
PfoI TCCNGGA 1 cut(s) 550
PkrI GCNGC 5 cut(s) 58, 576, 579, 847, 1264
PleI GAGTC 3 cut(s) 236, 540, 1365
PpsI GAGTC 3 cut(s) 236, 540, 1365
Psp6I CCWGG 3 cut(s) 112, 550, 1236
PspEI GGTNACC 1 cut(s) 1232
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 3 cut(s) 112, 550, 1236
PspN4I GGNNCC 2 cut(s) 229, 861
PspPI GGNCC 2 cut(s) 635, 1113
PstI CTGCAG 3 cut(s) 58, 787, 1267
PsuI RGATCY 2 cut(s) 859, 1254
PvuII CAGCTG 2 cut(s) 59, 577
RsaI GTAC 2 cut(s) 182, 1148
RsaNI GTAC 2 cut(s) 181, 1147
RseI CAYNNNNRTG 1 cut(s) 1015
SaqAI TTAA 4 cut(s) 779, 974, 1052, 1251
SatI GCNGC 5 cut(s) 57, 575, 578, 846, 1263
Sau3AI GATC 7 cut(s) 234, 261, 859, 953, 1080, 1201, 1254
Sau96I GGNCC 2 cut(s) 635, 1113
SchI GAGTC 3 cut(s) 236, 541, 1365
ScrFI CCNGG 7 cut(s) 114, 147, 471, 502, 552, 1227, 1238
SduI GDGCHC 1 cut(s) 283
SfaNI GCATC 4 cut(s) 39, 561, 759, 1322
SfcI CTRYAG 3 cut(s) 54, 783, 1263
SinI GGWCC 1 cut(s) 635
SmiMI CAYNNNNRTG 1 cut(s) 1015
SmlI CTYRAG 1 cut(s) 1100
SmoI CTYRAG 1 cut(s) 1100
SphI GCATGC 1 cut(s) 907
Sse9I AATT 8 cut(s) 325, 732, 775, 829, 979, 1055, 1129, 1329
SsiI CCGC 5 cut(s) 163, 611, 796, 1143, 1170
SspI AATATT 1 cut(s) 349
SspMI CTAG 5 cut(s) 284, 371, 855, 951, 1271
StyD4I CCNGG 7 cut(s) 112, 145, 469, 500, 550, 1225, 1236
StyI CCWWGG 2 cut(s) 102, 854
TaaI ACNGT 3 cut(s) 205, 310, 872
TaqI TCGA 4 cut(s) 223, 329, 444, 1083
TasI AATT 8 cut(s) 325, 732, 775, 829, 979, 1055, 1129, 1329
TfiI GAWTC 4 cut(s) 220, 914, 1096, 1222
Tru1I TTAA 4 cut(s) 779, 974, 1052, 1251
Tru9I TTAA 4 cut(s) 779, 974, 1052, 1251
TscAI CASTG 3 cut(s) 94, 664, 963
TseFI GTSAC 3 cut(s) 866, 1036, 1232
TseI GCWGC 5 cut(s) 56, 574, 577, 845, 1262
Tsp45I GTSAC 3 cut(s) 866, 1036, 1232
TspDTI ATGAA 8 cut(s) 7, 17, 39, 63, 491, 550, 694, 1109
TspGWI ACGGA 2 cut(s) 441, 627
TspRI CASTG 3 cut(s) 94, 664, 963
VpaK11BI GGWCC 1 cut(s) 635
XapI RAATTY 2 cut(s) 325, 775
XceI RCATGY 1 cut(s) 907
XmaJI CCTAGG 1 cut(s) 854
XmiI GTMKAC 1 cut(s) 1209
XmnI GAANNNNTTC 1 cut(s) 1388
XspI CTAG 5 cut(s) 284, 371, 855, 951, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.