Rh7CG375800

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
47289341 .. 47294353
5013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG375800.1

Sequence Viewer

Length: 2436 bp
ATGGATGATCTTTGTTTTGTGGTGTTTAGTACTAGTTTGTTCTCTCTGTTGTTCACAGGTTCATTTGCAGTTGACAGCATCAATCCGTCGCAGTCTATCAGTGATAATGGCAGTGCCTTGGTTTCAAGTGATGGAACATTTGAGTTGGGTTTCTTCAGTCCAGGTAACACGAAACATCGTTACTTGGGAATTTGGTACAAAAACATCCCAGTTAAAACTGTTGTTTGGGTTGCAAATCGATGCAAACCGATTGATGACTCATCCGGTGTGTTGATGATAAACAGCACAGGATATCTTGTGCTGTTGAGTCAGAATAAGACTGTTGTTTGGTGGACAAGTGTAGCTAAGTATGCACAGAGTACAATGGTACAGCTATTAGATTCTGGAAATTTAGTAGTGAGGGATGTGACAGATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAGGACAGGTCTACAGAGGGGATTATCAGCATGGAAAAATTCAGAAGACCCATGTCCAGGGGAATTCACTTATGGGATTGCAATGGAACCTCATGCATACCCTGAGGCATATTTTCGGAAAGGTGGTCTGAAATTTTATCGTTCTGGCCCATGGAATGGCCTAAGATTCAGTGGCGCAGCAGCTCTAAGGCCTAATCCAATTTATAGTTTTGATTTTGTGCATAATGATGATGAAGTTTACTACATGTACAAACTTCAAAGCAAGTCTGTAATTTCAATCGTGGTCTTAAATGGAACCACGAGTACGCGCCATCGCCTTACATGGATTGAAGCAGAGCAAACTTGGAGGGCCTATGCAATAGTGCCTAGAGATTTCTGTGATCAATATGGCCTCTGTGGAGCAAATGCAGAGTGTATCGTTAGTAACAGTCCAGTATGTCAATGTCTACAAGGATTCACGCCCAAGTCACCAGAGAAATGGAATTTGACAGACTGGTCACTTGGATGTACGCGCAGGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGACGGGTTTGTCAAATTCACTGACTTGAAATTGCCAGATACTACACATTCTTGGGTGAACAAAAGTACGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGACATTAAAGCAGGTGGTTCTGGCTGCGCCATTTGGTTCGGTGATCTACTAGATATCAGAAAGATTCCGGATGCTGGCCAAGATCTATACATTCGAATGTCAGCTTCAGAGATAGAAGATGGTGGTGAAGTGAAGACAGGAATTATAGTTGCTGTTGTGATAGCTGCAGTGTTTACAGGAATAATCTTAATTGGCTACTACGTGTACCGAAGCAGGACCAAATTAAAAGAGACAGAAAAACGAGAAGAAGGGGCACAAAAGGAGGACCTGAAGCTCCCGATTTTCAACATAACCACGATAGCTACTGCTACAGATAACTTTTCAGATGATAAGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAAGGGGACACTAGCAGATGGACAAGAATTTGCTGTGAAGAGGCTTTCAAGCAGTTCTGGCCAAGGATTTAATGAGTTTAGGAATGAAATTATAATGATTGCCAAACTTCAGCACCGAAATCTTGTAAAGATTCTTGGTTGTTGTGTGCAAGAGGAGAAAATGCTGATGTACGAATACATGTCCAACGGAAGCCTGGACTACTTCATTTTTGATCAAACCAGGGAAGAACTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTTGGCTAGAATATTAACCGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTCGGGACATATGGCTACATGGCACCTGAATATGCTGCTGATGGGGTATTTTCTGTGAAATCCGATGTCTTTAGCTTCGGTATATTGGTGCTAGAGATTATAAGTGGAAGGAGAAACAAAGGATTTTATCATCCAGACGACAGCCATAATCTTATTGGAAATGCTTGGAGATTGTGGAATGAAAGAAGGCCTTTAGAATTGATTGATTCGTGGTTAAAGAGCTTATGTGATCTATCAGAAGTGTTACGTTGCATCCAAGTTAGTCTTTTGTGCGTTCAACATCATCCTGAGAATCGGCCAAGCATGGCGTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGGCTCAACCTAAACAACCTGGTTTCCTTCTGGAAAAGGAACATGAAGCAAGCCCTGATATAGGTAATGAATTATCAACCAATGAAATATCCATTTCGCTTTTGGAAGCGCGGTAA

Protein Analysis

811

Amino Acids

90.84

Weight (kDa)

5.96

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 175 3.5e-36 D-mannose binding lectin
S_locus_glycop PF00954 209 - 319 2.6e-28 S-locus glycoprotein domain
PAN_2 PF08276 340 - 408 6.2e-22 PAN-like domain
Pkinase PF00069 497 - 764 8.6e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 499 - 765 4.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1625, 2078, 2297
AarI CACCTGC 1 cut(s) 1169
AasI GACNNNNNNGTC 2 cut(s) 982, 1043
Acc36I ACCTGC 1 cut(s) 1169
AccB1I GGYRCC 1 cut(s) 1999
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 2 cut(s) 499, 934
AccII CGCG 3 cut(s) 796, 1000, 2431
AccIII TCCGGA 1 cut(s) 1234
AciI CCGC 1 cut(s) 2431
AclI AACGTT 1 cut(s) 1783
AcoI YGGCCR 3 cut(s) 1243, 1591, 2273
AcsI RAATTY 9 cut(s) 189, 388, 526, 551, 620, 970, 1049, 1559, 1908
AcuI CTGAAG 4 cut(s) 139, 1257, 1457, 1625
AcyI GRCGYC 1 cut(s) 2285
AfiI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1845, 2381
AflIII ACRYGT 3 cut(s) 732, 1368, 1710
AgsI TTSAA 9 cut(s) 126, 746, 765, 818, 1063, 1135, 1453, 1581, 2255
AhlI ACTAGT 1 cut(s) 32
AjnI CCWGG 7 cut(s) 160, 544, 1020, 1725, 1751, 1838, 2338
AjuI GAANNNNNNNTTGG 2 cut(s) 1503, 1535
AloI GAACNNNNNNTCC 2 cut(s) 1127, 1159
Alw26I GTCTC 2 cut(s) 1391, 1820
Ama87I CYCGRG 1 cut(s) 1809
Aor13HI TCCGGA 1 cut(s) 1234
ApeKI GCWGC 6 cut(s) 665, 668, 1017, 1191, 1331, 2012
ApoI RAATTY 9 cut(s) 189, 388, 526, 551, 620, 970, 1049, 1559, 1908
AspLEI GCGC 5 cut(s) 665, 798, 1002, 1196, 2431
AspS9I GGNCC 5 cut(s) 635, 837, 1383, 1432, 1523
AsuHPI GGTGA 4 cut(s) 948, 1102, 1220, 1304
AsuII TTCGAA 1 cut(s) 1261
AvaI CYCGRG 1 cut(s) 1809
AvaII GGWCC 3 cut(s) 1383, 1432, 1523
AxyI CCTNAGG 1 cut(s) 591
BaeGI GKGCMC 1 cut(s) 1423
BalI TGGCCA 2 cut(s) 1245, 1593
BanI GGYRCC 1 cut(s) 1999
BauI CACGAG 1 cut(s) 787
BbsI GAAGAC 2 cut(s) 540, 1307
BbvI GCAGC 6 cut(s) 677, 680, 1004, 1178, 1318, 1999
BccI CCATC 8 cut(s) 125, 407, 469, 474, 807, 1280, 1544, 2012
BciT130I CCWGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
BclI TGATCA 2 cut(s) 868, 1744
BcoDI GTCTC 2 cut(s) 1391, 1820
BcuI ACTAGT 1 cut(s) 32
BfaI CTAG 6 cut(s) 33, 855, 1217, 1544, 1929, 2069
BfmI CTRYAG 3 cut(s) 500, 1332, 1476
BfuAI ACCTGC 1 cut(s) 1169
BglII AGATCT 2 cut(s) 1249, 1861
BisI GCNGC 6 cut(s) 666, 669, 1018, 1192, 1332, 2013
BlsI GCNGC 6 cut(s) 667, 670, 1019, 1193, 1333, 2014
BmcAI AGTACT 1 cut(s) 31
Bme1390I CCNGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
Bme18I GGWCC 3 cut(s) 1383, 1432, 1523
BmeT110I CYCGRG 1 cut(s) 1809
BmgT120I GGNCC 5 cut(s) 635, 837, 1383, 1432, 1523
BmiI GGNNCC 3 cut(s) 576, 784, 2001
BmrFI CCNGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 4 cut(s) 87, 230, 1228, 2238
BmuI ACTGGG 1 cut(s) 203
BoxI GACNNNNGTC 1 cut(s) 540
BpiI GAAGAC 2 cut(s) 540, 1307
BpmI CTGGAG 1 cut(s) 1977
Bpu10I CCTNAGC 2 cut(s) 1013, 1844
Bpu14I TTCGAA 1 cut(s) 1261
Bsa29I ATCGAT 1 cut(s) 238
BsaAI YACGTR 1 cut(s) 1369
BsaHI GRCGYC 1 cut(s) 2285
BsaI GGTCTC 1 cut(s) 1820
BsaJI CCNNGG 5 cut(s) 117, 545, 638, 1594, 1752
BsaWI WCCGGW 3 cut(s) 263, 1234, 1940
Bsc4I CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1845, 2381
Bse1I ACTGG 4 cut(s) 209, 920, 986, 1960
Bse21I CCTNAGG 1 cut(s) 591
Bse3DI GCAATG 1 cut(s) 576
BseAI TCCGGA 1 cut(s) 1234
BseBI CCWGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
BseCI ATCGAT 1 cut(s) 238
BseDI CCNNGG 5 cut(s) 117, 545, 638, 1594, 1752
BseLI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1845, 2381
BseMI GCAATG 1 cut(s) 576
BseMII CTCAG 2 cut(s) 582, 2256
BseNI ACTGG 4 cut(s) 209, 920, 986, 1960
BseRI GAGGAG 3 cut(s) 1700, 1808, 1959
BseSI GKGCMC 1 cut(s) 1423
BseXI GCAGC 6 cut(s) 677, 680, 1004, 1178, 1318, 1999
Bsh1236I CGCG 3 cut(s) 796, 1000, 2431
BshNI GGYRCC 1 cut(s) 1999
BshVI ATCGAT 1 cut(s) 238
BsiHKCI CYCGRG 1 cut(s) 1809
BsiSI CCGG 3 cut(s) 264, 1235, 1941
BslFI GGGAC 3 cut(s) 497, 1552, 1996
BslI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1845, 2381
BsmAI GTCTC 2 cut(s) 1391, 1820
BsmFI GGGAC 3 cut(s) 497, 1552, 1996
BsmI GAATGC 1 cut(s) 1121
Bso31I GGTCTC 1 cut(s) 1820
BsoBI CYCGRG 1 cut(s) 1809
Bsp119I TTCGAA 1 cut(s) 1261
Bsp1286I GDGCHC 1 cut(s) 1423
Bsp13I TCCGGA 1 cut(s) 1234
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
Bsp19I CCATGG 1 cut(s) 638
BspACI CCGC 1 cut(s) 2431
BspCNI CTCAG 2 cut(s) 583, 2257
BspDI ATCGAT 1 cut(s) 238
BspEI TCCGGA 1 cut(s) 1234
BspFNI CGCG 3 cut(s) 796, 1000, 2431
BspLI GGNNCC 3 cut(s) 576, 784, 2001
BspMAI CTGCAG 1 cut(s) 1336
BspMI ACCTGC 1 cut(s) 1169
BspT104I TTCGAA 1 cut(s) 1261
BspT107I GGYRCC 1 cut(s) 1999
BspTNI GGTCTC 1 cut(s) 1820
BsrDI GCAATG 1 cut(s) 576
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 4 cut(s) 209, 920, 986, 1960
BssECI CCNNGG 5 cut(s) 117, 545, 638, 1594, 1752
BssMI GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
BssNI GRCGYC 1 cut(s) 2285
BssSI CACGAG 1 cut(s) 787
BssT1I CCWWGG 3 cut(s) 117, 638, 1594
Bst2BI CACGAG 1 cut(s) 787
Bst2UI CCWGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
Bst4CI ACNGT 5 cut(s) 220, 322, 917, 1142, 1767
Bst6I CTCTTC 1 cut(s) 1565
BstACI GRCGYC 1 cut(s) 2285
BstAUI TGTACA 1 cut(s) 735
BstBAI YACGTR 1 cut(s) 1369
BstBI TTCGAA 1 cut(s) 1261
BstC8I GCNNGC 2 cut(s) 1243, 2371
BstDEI CTNAG 8 cut(s) 345, 591, 650, 674, 1013, 1844, 1968, 2265
BstDSI CCRYGG 1 cut(s) 638
BstENI CCTNNNNNAGG 1 cut(s) 2379
BstFNI CGCG 3 cut(s) 796, 1000, 2431
BstHHI GCGC 5 cut(s) 665, 798, 1002, 1196, 2431
BstKTI GATC 8 cut(s) 10, 871, 1213, 1252, 1747, 1864, 1951, 2209
BstMAI GTCTC 2 cut(s) 1391, 1820
BstMBI GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
BstMWI GCNNNNNNNGC 2 cut(s) 350, 1590
BstNI CCWGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
BstNSI RCATGY 2 cut(s) 736, 1714
BstPAI GACNNNNGTC 1 cut(s) 540
BstSCI CCNGG 7 cut(s) 160, 544, 1020, 1725, 1751, 1838, 2338
BstSFI CTRYAG 3 cut(s) 500, 1332, 1476
BstSLI GKGCMC 1 cut(s) 1423
BstUI CGCG 3 cut(s) 796, 1000, 2431
BstV1I GCAGC 6 cut(s) 677, 680, 1004, 1178, 1318, 1999
BstV2I GAAGAC 2 cut(s) 540, 1307
BstX2I RGATCY 2 cut(s) 1249, 1861
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 2 cut(s) 1249, 1861
Bsu15I ATCGAT 1 cut(s) 238
Bsu36I CCTNAGG 1 cut(s) 591
BsuTUI ATCGAT 1 cut(s) 238
BtgI CCRYGG 1 cut(s) 638
BtgZI GCGATG 1 cut(s) 785
BtsI GCAGTG 2 cut(s) 118, 1341
BtsIMutI CAGTG 5 cut(s) 106, 118, 664, 1053, 1341
BveI ACCTGC 1 cut(s) 1169
Cac8I GCNNGC 2 cut(s) 1243, 2371
CfoI GCGC 5 cut(s) 665, 798, 1002, 1196, 2431
Cfr13I GGNCC 5 cut(s) 635, 837, 1383, 1432, 1523
ClaI ATCGAT 1 cut(s) 238
CseI GACGC 1 cut(s) 2274
CsiI ACCWGGT 1 cut(s) 2338
CspCI CAANNNNNGTGG 2 cut(s) 1778, 1813
DdeI CTNAG 8 cut(s) 345, 591, 650, 674, 1013, 1844, 1968, 2265
DpnI GATC 8 cut(s) 9, 870, 1212, 1251, 1746, 1863, 1950, 2208
DpnII GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
DrdI GACNNNNNNGTC 2 cut(s) 982, 1043
DseDI GACNNNNNNGTC 2 cut(s) 982, 1043
EaeI YGGCCR 3 cut(s) 1243, 1591, 2273
Eam1104I CTCTTC 1 cut(s) 1565
EarI CTCTTC 1 cut(s) 1565
Eco130I CCWWGG 3 cut(s) 117, 638, 1594
Eco147I AGGCCT 2 cut(s) 679, 2167
Eco31I GGTCTC 1 cut(s) 1820
Eco32I GATATC 2 cut(s) 293, 1222
Eco47I GGWCC 3 cut(s) 1383, 1432, 1523
Eco57I CTGAAG 4 cut(s) 139, 1257, 1457, 1625
Eco81I CCTNAGG 1 cut(s) 591
Eco88I CYCGRG 1 cut(s) 1809
EcoNI CCTNNNNNAGG 1 cut(s) 2379
EcoO109I RGGNCCY 2 cut(s) 837, 1432
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 7 cut(s) 160, 544, 1020, 1725, 1751, 1838, 2338
EcoRV GATATC 2 cut(s) 293, 1222
EcoT14I CCWWGG 3 cut(s) 117, 638, 1594
EcoT22I ATGCAT 1 cut(s) 586
ErhI CCWWGG 3 cut(s) 117, 638, 1594
FalI AAGNNNNNCTT 4 cut(s) 2152, 2184, 2226, 2258
FaqI GGGAC 3 cut(s) 497, 1552, 1996
FauNDI CATATG 1 cut(s) 1987
FbaI TGATCA 2 cut(s) 868, 1744
FblI GTMKAC 2 cut(s) 499, 934
Fnu4HI GCNGC 6 cut(s) 666, 669, 1018, 1192, 1332, 2013
Fsp4HI GCNGC 6 cut(s) 666, 669, 1018, 1192, 1332, 2013
FspBI CTAG 6 cut(s) 33, 855, 1217, 1544, 1929, 2069
GlaI GCGC 5 cut(s) 664, 797, 1001, 1195, 2430
GluI GCNGC 6 cut(s) 666, 669, 1018, 1192, 1332, 2013
GsuI CTGGAG 1 cut(s) 1977
HapII CCGG 3 cut(s) 264, 1235, 1941
HgaI GACGC 1 cut(s) 2274
HhaI GCGC 5 cut(s) 665, 798, 1002, 1196, 2431
Hin1I GRCGYC 1 cut(s) 2285
Hin6I GCGC 5 cut(s) 663, 796, 1000, 1194, 2429
HinP1I GCGC 5 cut(s) 663, 796, 1000, 1194, 2429
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 2 cut(s) 433, 1502
HpaII CCGG 3 cut(s) 264, 1235, 1941
HphI GGTGA 4 cut(s) 948, 1102, 1220, 1304
Hpy188III TCNNGA 7 cut(s) 384, 1235, 1444, 1981, 2111, 2264, 2351
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 6 cut(s) 456, 1409, 1505, 2079, 2157, 2357
HpyCH4III ACNGT 5 cut(s) 220, 322, 917, 1142, 1767
HpyCH4IV ACGT 3 cut(s) 1368, 1783, 2224
HpyF10VI GCNNNNNNNGC 2 cut(s) 350, 1590
HpyF3I CTNAG 8 cut(s) 345, 591, 650, 674, 1013, 1844, 1968, 2265
HpySE526I ACGT 3 cut(s) 1368, 1783, 2224
Hsp92I GRCGYC 1 cut(s) 2285
HspAI GCGC 5 cut(s) 663, 796, 1000, 1194, 2429
Kpn2I TCCGGA 1 cut(s) 1234
Ksp22I TGATCA 2 cut(s) 868, 1744
Kzo9I GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
LmnI GCTCC 2 cut(s) 887, 1446
Lsp1109I GCAGC 6 cut(s) 677, 680, 1004, 1178, 1318, 1999
LweI GCATC 4 cut(s) 87, 230, 1228, 2238
MabI ACCWGGT 1 cut(s) 2338
MaeI CTAG 6 cut(s) 33, 855, 1217, 1544, 1929, 2069
MaeII ACGT 3 cut(s) 1368, 1783, 2224
MaeIII GTNAC 8 cut(s) 164, 179, 406, 459, 911, 954, 984, 2220
MalI GATC 8 cut(s) 9, 870, 1212, 1251, 1746, 1863, 1950, 2208
MboI GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
MboII GAAGA 8 cut(s) 145, 484, 545, 1295, 1312, 1424, 1582, 1769
MflI RGATCY 2 cut(s) 1249, 1861
MhlI GDGCHC 1 cut(s) 1423
MlsI TGGCCA 2 cut(s) 1245, 1593
MluNI TGGCCA 2 cut(s) 1245, 1593
MlyI GAGTC 2 cut(s) 251, 316
MmeI TCCRAC 1 cut(s) 1740
Mox20I TGGCCA 2 cut(s) 1245, 1593
Mph1103I ATGCAT 1 cut(s) 586
MroI TCCGGA 1 cut(s) 1234
MscI TGGCCA 2 cut(s) 1245, 1593
MseI TTAA 8 cut(s) 213, 776, 1173, 1355, 1391, 1602, 1937, 2192
MslI CAYNNNNRTG 3 cut(s) 714, 991, 1262
Msp20I TGGCCA 2 cut(s) 1245, 1593
MspI CCGG 3 cut(s) 264, 1235, 1941
MspR9I CCNGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
Mva1269I GAATGC 1 cut(s) 1121
MvaI CCWGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
MvnI CGCG 3 cut(s) 796, 1000, 2431
MwoI GCNNNNNNNGC 2 cut(s) 350, 1590
NcoI CCATGG 1 cut(s) 638
NdeI CATATG 1 cut(s) 1987
NdeII GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
NlaIV GGNNCC 3 cut(s) 576, 784, 2001
NmuCI GTSAC 3 cut(s) 406, 954, 984
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 2 cut(s) 736, 1714
NspV TTCGAA 1 cut(s) 1261
PaqCI CACCTGC 1 cut(s) 1169
PceI AGGCCT 2 cut(s) 679, 2167
PciI ACATGT 2 cut(s) 732, 1710
PctI GAATGC 1 cut(s) 1121
PfeI GAWTC 9 cut(s) 380, 654, 942, 1231, 1663, 1835, 1900, 2183, 2269
PflMI CCANNNNNTGG 1 cut(s) 644
PkrI GCNGC 6 cut(s) 667, 670, 1019, 1193, 1333, 2014
PleI GAGTC 2 cut(s) 251, 315
PpsI GAGTC 2 cut(s) 251, 315
Ppu21I YACGTR 1 cut(s) 1369
PpuMI RGGWCCY 1 cut(s) 1432
PscI ACATGT 2 cut(s) 732, 1710
PshAI GACNNNNGTC 1 cut(s) 540
PsiI TTATAA 3 cut(s) 1625, 2078, 2297
Psp1406I AACGTT 1 cut(s) 1783
Psp5II RGGWCCY 1 cut(s) 1432
Psp6I CCWGG 7 cut(s) 160, 544, 1020, 1725, 1751, 1838, 2338
PspGI CCWGG 7 cut(s) 160, 544, 1020, 1725, 1751, 1838, 2338
PspN4I GGNNCC 3 cut(s) 576, 784, 2001
PspPI GGNCC 5 cut(s) 635, 837, 1383, 1432, 1523
PspPPI RGGWCCY 1 cut(s) 1432
PsrI GAACNNNNNNTAC 2 cut(s) 775, 807
PstI CTGCAG 1 cut(s) 1336
PsuI RGATCY 2 cut(s) 1249, 1861
RseI CAYNNNNRTG 3 cut(s) 714, 991, 1262
SaqAI TTAA 8 cut(s) 213, 776, 1173, 1355, 1391, 1602, 1937, 2192
SatI GCNGC 6 cut(s) 666, 669, 1018, 1192, 1332, 2013
Sau3AI GATC 8 cut(s) 7, 868, 1210, 1249, 1744, 1861, 1948, 2206
Sau96I GGNCC 5 cut(s) 635, 837, 1383, 1432, 1523
ScaI AGTACT 1 cut(s) 31
SchI GAGTC 2 cut(s) 251, 316
ScrFI CCNGG 7 cut(s) 162, 546, 1022, 1727, 1753, 1840, 2340
SduI GDGCHC 1 cut(s) 1423
SexAI ACCWGGT 1 cut(s) 2338
SfaNI GCATC 4 cut(s) 87, 230, 1228, 2238
SfcI CTRYAG 3 cut(s) 500, 1332, 1476
SfuI TTCGAA 1 cut(s) 1261
SinI GGWCC 3 cut(s) 1383, 1432, 1523
SmiMI CAYNNNNRTG 3 cut(s) 714, 991, 1262
SpeI ACTAGT 1 cut(s) 32
SseBI AGGCCT 2 cut(s) 679, 2167
SsiI CCGC 1 cut(s) 2431
SspI AATATT 1 cut(s) 1935
SspMI CTAG 6 cut(s) 33, 855, 1217, 1544, 1929, 2069
StuI AGGCCT 2 cut(s) 679, 2167
StyD4I CCNGG 7 cut(s) 160, 544, 1020, 1725, 1751, 1838, 2338
StyI CCWWGG 3 cut(s) 117, 638, 1594
TaaI ACNGT 5 cut(s) 220, 322, 917, 1142, 1767
TaiI ACGT 3 cut(s) 1371, 1786, 2227
TaqI TCGA 3 cut(s) 238, 438, 1261
TatI WGTACW 3 cut(s) 29, 359, 735
TfiI GAWTC 9 cut(s) 380, 654, 942, 1231, 1663, 1835, 1900, 2183, 2269
Tru1I TTAA 8 cut(s) 213, 776, 1173, 1355, 1391, 1602, 1937, 2192
Tru9I TTAA 8 cut(s) 213, 776, 1173, 1355, 1391, 1602, 1937, 2192
TscAI CASTG 5 cut(s) 106, 118, 664, 1060, 1341
TseFI GTSAC 3 cut(s) 406, 954, 984
TseI GCWGC 6 cut(s) 665, 668, 1017, 1191, 1331, 2012
Tsp45I GTSAC 3 cut(s) 406, 954, 984
TspGWI ACGGA 2 cut(s) 75, 1734
TspRI CASTG 5 cut(s) 106, 118, 664, 1060, 1341
Van91I CCANNNNNTGG 1 cut(s) 644
VpaK11BI GGWCC 3 cut(s) 1383, 1432, 1523
XagI CCTNNNNNAGG 1 cut(s) 2379
XapI RAATTY 9 cut(s) 189, 388, 526, 551, 620, 970, 1049, 1559, 1908
XceI RCATGY 2 cut(s) 736, 1714
XcmI CCANNNNNNNNNTGG 4 cut(s) 1723, 1796, 2129, 2419
XmiI GTMKAC 2 cut(s) 499, 934
XspI CTAG 6 cut(s) 33, 855, 1217, 1544, 1929, 2069
ZrmI AGTACT 1 cut(s) 31
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.