pycom03g16540

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
17702272 .. 17705522
3251 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g16540.1

Sequence Viewer

Length: 2526 bp
ATGGGTGGTCTTTGTTTTTCGTTTATGATCAGCGCTAACTTGTTCTTCTTGTCATCAACAATTTCCCTTGCAGTTGACGGCATTACACCTTCGCAGTCTGTCCTTGATGGAACGACGTTGGTTTCAAGTGATGGGAGCTTTGAGCTCGGTTTCTTTAGTCCAGGTAGTTCCAAGAACCGTTACTTGGGAATTTGGTTCAAGAATGTCCCGGTTAGAACGGTTGTTTGGGTTGCAAACAGATGCAACCCCATCAATGATTCTTCCGGCGTGTTGATGATTAACAGCACAGGTAATCTTGTGCTTTTGAGTCAGAATAGCAGCGTTGTTTGGTCGCCGAGTTTAGTTCAACACGCCCAAAATGCGACGGTAGAGCTCTTGGATTCCGGGAATTTGGTACTGAGAGATGCAAAAGATGGAAATTCAGGAACTCATTTGTGGCAAAGCTTCGACCATCCTTCTGATACATTATTACCAGGAATGAAGTTGGGGTGGGACTTGAGAACAGGCCTAAAACGGCATTTGTCAGCATGGAAAAATTCAGATGACCCGTGTCCCGGTGATTTTACTTACGGAATTGGAATGGAACATCAAGCATATCCTGAGGCATATATTCTGAACGGAAGCACAAAATTCTTTCGCACCAGCCCATGGAATGGACTGACAATCTGCGGTTCACCCGAAGATCCTAGCCCTCGTTATAGTTTCAATTTTGTCTACAACGACGATGAAGTTTACGTCACATACAAACCGAAGATTGAGTCGATACTCTCAAGAGTGGTTTTGAACCAAACCACCAGCACATGTGCTCGGTTTCAGTGGAAGGTGGGAGATCAAGCTTGGCAGGATTTTTCATCAAGACCTACAGAATCATGTGATTATTATGGCTTCTGTGGAGCCAATGGAAATTGTACCAGTGAGGATCCGGTCTGCAAATGTATACAAGGATTCAGCCCCAAGTCTCAAGAAAAGTGGAATTTAGCAGACTGGTCTCTAGGTTGCGTGCGCAATAAACCATTAAGCTGCCACGAAAGAGATGAAGATGAGTTTCTCAAATTTGATGGCTTCAAATTGCCAGATACTACAAATTCTTGGGTGGACAAAAGTATGAATCTCAAGGAATGCAGAGCCAAATGCTTGAAAAACTGTTCCTGTACTGCTTATACGAGCTCAGATATCGGAGGAGGAAGTAGTGGCTGCACCATCTGGTTTGGTGATCTAATAGATATCGAACAGGTTCCTGTTGCTGGAAAGGAAATATATATTCGAACGTCAGCTGCTGATATAGGAGAAAACAGCAGAAAAGTGAAGATTGCAATTGTAGTTGTTGGCATAGCAATAGTGTTTTCCGGAGTGCTGTTAGTTGGCTATGTCATTCGCCGAAGAAAGAGAAAAAATAAAGAAATAAGGGAAAGAAATGAGGACAATGAAGGGGCTCCAAGAGGGGACATGGAGCTCCCACTCTTTGACCTGATGACAGTAGCTAGCGCCACGGATAACTTTTCAAGCAATAAAAAGCTCGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGGACGCTGGCCGACGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCCGGCCAAGGATTGAACGAGTTCATGAATGAAGTTAGATTGATTGCCAAACTCCAGCACCGAAATCTGGTTAGGCTTCTTGGTTGTTGCGTTCAAGGAGAGGAGAAATTGCTACTTTACGAATACATGCCCAACGGAAGCCTAGACTCCTCCATTTTTGATGAAACGAGAAGAGAAATGTTCGATTGGCCTAAACGTTTCAACATTATATGTGGCATTGCTCGAGGTCTCGTCTATCTCCATCAGGATTCTAGGCTAAGGATTATTCATAGAGATCGATCGATCAAAGCAAGTAATGTTTTACTTGATAATGAAATGAATCCGAAAATTTCAGACTTTGGCCTAGCTAGATTATTGACTGAAGGAGATCAGACTGTAGCAAATACAGAGAGATTAGTTGGCACGTACGGTTACATGGCACCCGAATATGTTATGGGCGGGCAATTTTCTGTGAAATCCGATGTCTTTAGCTTTGGTATTTTGGTGCTGGAGATCGTTACTGGAAGGAAAAATAAAGGATTCTCCGATCCAAGCAACAGCCGTAACCTTTCTGAACAGTTATGGAGATTGTGGAATGAAGGGAAGCCTTTAGAACTGATTGATACATGCTTAGCAAGCTCAGGCACTCTATCGGAAGTGTTGCGTTGCATCAACATTGGTCTCTTGTGTGCGCAACATCATCCTGACGACAGGCCAAGCATGGCGGCTGTGGTTATAATGTTGGGAAGTGAGACTGCTTTGGCTCAACCGAAACAACCCGGTTTCTTCATGGAAAAGGGAACACCTGAAGCAGGTTCTAATTCAGGTAATCAGACATGTTCAACCAACGAATTATCGATCGATCGCTTTTGGAGGCTCGATAAGGATCATCTTATTCATCTCAGACTACATCTCTATGCTTTCCTATCAAACATTTGTTCAAAATAA

Protein Analysis

842

Amino Acids

93.44

Weight (kDa)

6.22

Isoelectric Point (pI)

40.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 178 6.8e-38 D-mannose binding lectin
S_locus_glycop PF00954 212 - 320 2.6e-22 S-locus glycoprotein domain
PAN_2 PF08276 341 - 409 1.3e-22 PAN-like domain
Pkinase PF00069 501 - 705 8.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 502 - 771 2.3e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2315
Acc16I TGCGCA 2 cut(s) 1004, 2271
Acc36I ACCTGC 1 cut(s) 2381
AccB1I GGYRCC 1 cut(s) 2017
AccB7I CCANNNNNTGG 2 cut(s) 648, 653
AccI GTMKAC 2 cut(s) 714, 937
AccIII TCCGGA 1 cut(s) 1346
AciI CCGC 3 cut(s) 669, 2037, 2303
AclI AACGTT 1 cut(s) 1795
AclWI GGATC 5 cut(s) 677, 914, 927, 2120, 2472
AcoI YGGCCR 2 cut(s) 1557, 1603
AcsI RAATTY 9 cut(s) 189, 388, 418, 535, 629, 973, 1052, 1084, 1926
AcuI CTGAAG 2 cut(s) 1980, 2406
AfaI GTAC 4 cut(s) 396, 910, 1153, 2006
AfeI AGCGCT 1 cut(s) 34
AfiI CCNNNNNNNGG 7 cut(s) 184, 554, 648, 653, 1244, 1666, 2390
AflIII ACRYGT 2 cut(s) 800, 2414
AjnI CCWGG 2 cut(s) 160, 472
AjuI GAANNNNNNNTTGG 6 cut(s) 167, 199, 208, 240, 1515, 1547
Alw21I GWGCWC 5 cut(s) 147, 375, 808, 1169, 1455
Alw26I GTCTC 5 cut(s) 963, 993, 1832, 2264, 2324
AlwI GGATC 5 cut(s) 677, 914, 927, 2120, 2472
AlwNI CAGNNNCTG 1 cut(s) 1277
Ama87I CYCGRG 1 cut(s) 1821
Aor13HI TCCGGA 1 cut(s) 1346
Aor51HI AGCGCT 1 cut(s) 34
AoxI GGCC 7 cut(s) 505, 1534, 1557, 1603, 1787, 1939, 2291
ApeKI GCWGC 4 cut(s) 318, 1020, 1194, 1274
ApoI RAATTY 9 cut(s) 189, 388, 418, 535, 629, 973, 1052, 1084, 1926
ArsI GACNNNNNNTTYG 2 cut(s) 743, 775
Asp700I GAANNNNTTC 2 cut(s) 1233, 1619
AspLEI GCGC 4 cut(s) 35, 1005, 1487, 2272
AspS9I GGNCC 1 cut(s) 1535
AsuC2I CCSGG 4 cut(s) 209, 385, 555, 2358
AsuHPI GGTGA 3 cut(s) 569, 666, 1223
AsuII TTCGAA 1 cut(s) 1264
AsuNHI GCTAGC 1 cut(s) 1481
AvaI CYCGRG 1 cut(s) 1821
AxyI CCTNAGG 1 cut(s) 600
BamHI GGATCC 1 cut(s) 919
BanI GGYRCC 1 cut(s) 2017
BanII GRGCYC 5 cut(s) 147, 375, 1169, 1435, 1455
Bbv12I GWGCWC 5 cut(s) 147, 375, 808, 1169, 1455
BbvI GCAGC 4 cut(s) 330, 1007, 1181, 1261
BccI CCATC 8 cut(s) 101, 125, 257, 407, 459, 1052, 1208, 1848
BceAI ACGGC 3 cut(s) 94, 530, 2124
BciT130I CCWGG 2 cut(s) 162, 474
BclI TGATCA 1 cut(s) 27
BcnI CCSGG 4 cut(s) 209, 385, 555, 2358
BcoDI GTCTC 5 cut(s) 963, 993, 1832, 2264, 2324
BfaI CTAG 7 cut(s) 687, 992, 1482, 1742, 1851, 1943, 1947
BfmI CTRYAG 2 cut(s) 861, 1974
BfoI RGCGCY 2 cut(s) 36, 1488
BfuAI ACCTGC 1 cut(s) 2381
BisI GCNGC 5 cut(s) 319, 1021, 1195, 1275, 2304
BlpI GCTNAGC 1 cut(s) 2209
BlsI GCNGC 5 cut(s) 320, 1022, 1196, 1276, 2305
Bme1390I CCNGG 6 cut(s) 162, 209, 385, 474, 555, 2358
BmeT110I CYCGRG 1 cut(s) 1821
BmgT120I GGNCC 1 cut(s) 1535
BmiI GGNNCC 5 cut(s) 895, 921, 1236, 1434, 2019
BmrFI CCNGG 6 cut(s) 162, 209, 385, 474, 555, 2358
BmsI GCATC 3 cut(s) 230, 394, 2256
BmtI GCTAGC 1 cut(s) 1485
BoxI GACNNNNGTC 1 cut(s) 549
BpmI CTGGAG 2 cut(s) 1637, 2108
Bpu10I CCTNAGC 2 cut(s) 1856, 2218
Bpu1102I GCTNAGC 1 cut(s) 2209
Bpu14I TTCGAA 1 cut(s) 1264
BpuEI CTTGAG 4 cut(s) 517, 754, 945, 1097
BpuMI CCSGG 4 cut(s) 209, 385, 555, 2358
Bsa29I ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
BsaAI YACGTR 1 cut(s) 2004
BsaBI GATNNNNATC 1 cut(s) 2463
BsaI GGTCTC 3 cut(s) 993, 1832, 2264
BsaJI CCNNGG 3 cut(s) 647, 1488, 1606
BsaWI WCCGGW 2 cut(s) 922, 1346
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 554, 648, 653, 1244, 1666, 2390
Bse1I ACTGG 3 cut(s) 912, 989, 2104
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 1 cut(s) 1815
Bse8I GATNNNNATC 1 cut(s) 2463
BseAI TCCGGA 1 cut(s) 1346
BseBI CCWGG 2 cut(s) 162, 474
BseCI ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
BseDI CCNNGG 3 cut(s) 647, 1488, 1606
BseGI GGATG 2 cut(s) 451, 2278
BseJI GATNNNNATC 1 cut(s) 2463
BseLI CCNNNNNNNGG 7 cut(s) 184, 554, 648, 653, 1244, 1666, 2390
BseMI GCAATG 1 cut(s) 1815
BseMII CTCAG 5 cut(s) 389, 591, 1182, 2232, 2494
BseNI ACTGG 3 cut(s) 912, 989, 2104
BseRI GAGGAG 3 cut(s) 1194, 1715, 1738
BseXI GCAGC 4 cut(s) 330, 1007, 1181, 1261
BsgI GTGCAG 1 cut(s) 1180
Bsh1285I CGRYCG 3 cut(s) 1880, 2439, 2443
BshFI GGCC 7 cut(s) 507, 1536, 1559, 1605, 1789, 1941, 2293
BshNI GGYRCC 1 cut(s) 2017
BshVI ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
BsiEI CGRYCG 3 cut(s) 1880, 2439, 2443
BsiHKAI GWGCWC 5 cut(s) 147, 375, 808, 1169, 1455
BsiHKCI CYCGRG 1 cut(s) 1821
BsiSI CCGG 8 cut(s) 209, 264, 384, 555, 923, 1347, 1602, 2358
BsiWI CGTACG 1 cut(s) 2004
BslFI GGGAC 5 cut(s) 191, 506, 537, 1457, 1564
BslI CCNNNNNNNGG 7 cut(s) 184, 554, 648, 653, 1244, 1666, 2390
BsmAI GTCTC 5 cut(s) 963, 993, 1832, 2264, 2324
BsmFI GGGAC 5 cut(s) 191, 506, 537, 1457, 1564
BsmI GAATGC 1 cut(s) 1124
BsnI GGCC 7 cut(s) 507, 1536, 1559, 1605, 1789, 1941, 2293
Bso31I GGTCTC 3 cut(s) 993, 1832, 2264
BsoBI CYCGRG 1 cut(s) 1821
Bsp119I TTCGAA 1 cut(s) 1264
Bsp1286I GDGCHC 6 cut(s) 147, 375, 808, 1169, 1435, 1455
Bsp13I TCCGGA 1 cut(s) 1346
Bsp1720I GCTNAGC 1 cut(s) 2209
Bsp19I CCATGG 1 cut(s) 647
BspACI CCGC 3 cut(s) 669, 2037, 2303
BspANI GGCC 7 cut(s) 507, 1536, 1559, 1605, 1789, 1941, 2293
BspCNI CTCAG 5 cut(s) 390, 592, 1181, 2231, 2493
BspDI ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
BspEI TCCGGA 1 cut(s) 1346
BspHI TCATGA 1 cut(s) 1623
BspLI GGNNCC 5 cut(s) 895, 921, 1236, 1434, 2019
BspMI ACCTGC 1 cut(s) 2381
BspOI GCTAGC 1 cut(s) 1485
BspPI GGATC 5 cut(s) 677, 914, 927, 2120, 2472
BspT104I TTCGAA 1 cut(s) 1264
BspT107I GGYRCC 1 cut(s) 2017
BspTNI GGTCTC 3 cut(s) 993, 1832, 2264
BsrDI GCAATG 1 cut(s) 1815
BsrI ACTGG 3 cut(s) 912, 989, 2104
BssECI CCNNGG 3 cut(s) 647, 1488, 1606
BssNAI GTATAC 1 cut(s) 938
BssT1I CCWWGG 2 cut(s) 647, 1606
Bst1107I GTATAC 1 cut(s) 938
Bst2UI CCWGG 2 cut(s) 162, 474
Bst4CI ACNGT 8 cut(s) 179, 220, 367, 1145, 1477, 1975, 2009, 2157
Bst6I CTCTTC 2 cut(s) 1577, 1765
BstBAI YACGTR 1 cut(s) 2004
BstBI TTCGAA 1 cut(s) 1264
BstC8I GCNNGC 5 cut(s) 1001, 1483, 1557, 2039, 2215
BstDEI CTNAG 7 cut(s) 398, 600, 1168, 1856, 2209, 2218, 2480
BstDSI CCRYGG 2 cut(s) 647, 1488
BstENI CCTNNNNNAGG 1 cut(s) 2388
BstF5I GGATG 2 cut(s) 451, 2278
BstH2I RGCGCY 2 cut(s) 36, 1488
BstHHI GCGC 4 cut(s) 35, 1005, 1487, 2272
BstMAI GTCTC 5 cut(s) 963, 993, 1832, 2264, 2324
BstMCI CGRYCG 3 cut(s) 1880, 2439, 2443
BstMWI GCNNNNNNNGC 2 cut(s) 359, 2214
BstNI CCWGG 2 cut(s) 162, 474
BstNSI RCATGY 4 cut(s) 804, 1729, 2208, 2418
BstPAI GACNNNNGTC 1 cut(s) 549
BstSCI CCNGG 6 cut(s) 160, 207, 383, 472, 553, 2356
BstSFI CTRYAG 2 cut(s) 861, 1974
BstV1I GCAGC 4 cut(s) 330, 1007, 1181, 1261
BstX2I RGATCY 2 cut(s) 682, 919
BstYI RGATCY 2 cut(s) 682, 919
BstZ17I GTATAC 1 cut(s) 938
Bsu15I ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
Bsu36I CCTNAGG 1 cut(s) 600
BsuRI GGCC 7 cut(s) 507, 1536, 1559, 1605, 1789, 1941, 2293
BsuTUI ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
BtgI CCRYGG 2 cut(s) 647, 1488
BtsCI GGATG 2 cut(s) 451, 2278
BtsIMutI CAGTG 2 cut(s) 821, 919
BveI ACCTGC 1 cut(s) 2381
Cac8I GCNNGC 5 cut(s) 1001, 1483, 1557, 2039, 2215
CaiI CAGNNNCTG 1 cut(s) 1277
CciI TCATGA 1 cut(s) 1623
CfoI GCGC 4 cut(s) 35, 1005, 1487, 2272
Cfr13I GGNCC 1 cut(s) 1535
ClaI ATCGAT 4 cut(s) 1876, 1880, 2435, 2439
CseI GACGC 1 cut(s) 1561
Csp6I GTAC 4 cut(s) 395, 909, 1152, 2005
CspCI CAANNNNNGTGG 2 cut(s) 950, 985
CviQI GTAC 4 cut(s) 395, 909, 1152, 2005
DdeI CTNAG 7 cut(s) 398, 600, 1168, 1856, 2209, 2218, 2480
EaeI YGGCCR 2 cut(s) 1557, 1603
Eam1104I CTCTTC 2 cut(s) 1577, 1765
EarI CTCTTC 2 cut(s) 1577, 1765
Ecl136II GAGCTC 4 cut(s) 145, 373, 1167, 1453
Eco130I CCWWGG 2 cut(s) 647, 1606
Eco147I AGGCCT 1 cut(s) 507
Eco24I GRGCYC 5 cut(s) 147, 375, 1169, 1435, 1455
Eco31I GGTCTC 3 cut(s) 993, 1832, 2264
Eco32I GATATC 2 cut(s) 1174, 1225
Eco47III AGCGCT 1 cut(s) 34
Eco53kI GAGCTC 4 cut(s) 145, 373, 1167, 1453
Eco57I CTGAAG 2 cut(s) 1980, 2406
Eco81I CCTNAGG 1 cut(s) 600
Eco88I CYCGRG 1 cut(s) 1821
EcoICRI GAGCTC 4 cut(s) 145, 373, 1167, 1453
EcoNI CCTNNNNNAGG 1 cut(s) 2388
EcoRII CCWGG 2 cut(s) 160, 472
EcoRV GATATC 2 cut(s) 1174, 1225
EcoT14I CCWWGG 2 cut(s) 647, 1606
EcoT38I GRGCYC 5 cut(s) 147, 375, 1169, 1435, 1455
ErhI CCWWGG 2 cut(s) 647, 1606
FaqI GGGAC 5 cut(s) 191, 506, 537, 1457, 1564
FauI CCCGC 1 cut(s) 2030
FbaI TGATCA 1 cut(s) 27
FblI GTMKAC 2 cut(s) 714, 937
Fnu4HI GCNGC 5 cut(s) 319, 1021, 1195, 1275, 2304
FokI GGATG 2 cut(s) 438, 2265
FriOI GRGCYC 5 cut(s) 147, 375, 1169, 1435, 1455
Fsp4HI GCNGC 5 cut(s) 319, 1021, 1195, 1275, 2304
FspBI CTAG 7 cut(s) 687, 992, 1482, 1742, 1851, 1943, 1947
FspI TGCGCA 2 cut(s) 1004, 2271
GlaI GCGC 4 cut(s) 34, 1004, 1486, 2271
GluI GCNGC 5 cut(s) 319, 1021, 1195, 1275, 2304
GsuI CTGGAG 2 cut(s) 1637, 2108
HaeII RGCGCY 2 cut(s) 36, 1488
HaeIII GGCC 7 cut(s) 507, 1536, 1559, 1605, 1789, 1941, 2293
HapII CCGG 8 cut(s) 209, 264, 384, 555, 923, 1347, 1602, 2358
HgaI GACGC 1 cut(s) 1561
HhaI GCGC 4 cut(s) 35, 1005, 1487, 2272
Hin6I GCGC 4 cut(s) 33, 1003, 1485, 2270
HinP1I GCGC 4 cut(s) 33, 1003, 1485, 2270
HincII GTYRAC 1 cut(s) 76
HindII GTYRAC 1 cut(s) 76
HindIII AAGCTT 2 cut(s) 442, 834
HpaII CCGG 8 cut(s) 209, 264, 384, 555, 923, 1347, 1602, 2358
HphI GGTGA 3 cut(s) 569, 666, 1223
Hpy166II GTNNAC 7 cut(s) 76, 674, 715, 733, 938, 1096, 1543
Hpy8I GTNNAC 7 cut(s) 76, 674, 715, 733, 938, 1096, 1543
Hpy99I CGWCG 4 cut(s) 118, 367, 725, 1565
HpyAV CCTTC 8 cut(s) 99, 465, 814, 1421, 1517, 1955, 2097, 2171
HpyCH4III ACNGT 8 cut(s) 179, 220, 367, 1145, 1477, 1975, 2009, 2157
HpyCH4IV ACGT 5 cut(s) 116, 735, 1268, 1795, 2003
HpyCH4V TGCA 9 cut(s) 71, 233, 243, 407, 930, 1122, 1197, 1313, 2247
HpyF10VI GCNNNNNNNGC 2 cut(s) 359, 2214
HpyF3I CTNAG 7 cut(s) 398, 600, 1168, 1856, 2209, 2218, 2480
HpySE526I ACGT 5 cut(s) 116, 735, 1268, 1795, 2003
HspAI GCGC 4 cut(s) 33, 1003, 1485, 2270
Kpn2I TCCGGA 1 cut(s) 1346
Ksp22I TGATCA 1 cut(s) 27
LmnI GCTCC 5 cut(s) 135, 893, 1438, 1450, 1458
Lsp1109I GCAGC 4 cut(s) 330, 1007, 1181, 1261
LweI GCATC 3 cut(s) 230, 394, 2256
MaeI CTAG 7 cut(s) 687, 992, 1482, 1742, 1851, 1943, 1947
MaeII ACGT 5 cut(s) 116, 735, 1268, 1795, 2003
MaeIII GTNAC 5 cut(s) 179, 736, 2009, 2095, 2141
MfeI CAATTG 1 cut(s) 1314
MflI RGATCY 2 cut(s) 682, 919
MhlI GDGCHC 6 cut(s) 147, 375, 808, 1169, 1435, 1455
MlyI GAGTC 3 cut(s) 316, 767, 1739
MroI TCCGGA 1 cut(s) 1346
MroXI GAANNNNTTC 2 cut(s) 1233, 1619
MseI TTAA 2 cut(s) 279, 1016
MslI CAYNNNNRTG 1 cut(s) 2493
MspA1I CMGCKG 1 cut(s) 1274
MspI CCGG 8 cut(s) 209, 264, 384, 555, 923, 1347, 1602, 2358
MspR9I CCNGG 6 cut(s) 162, 209, 385, 474, 555, 2358
MunI CAATTG 1 cut(s) 1314
Mva1269I GAATGC 1 cut(s) 1124
MvaI CCWGG 2 cut(s) 162, 474
MwoI GCNNNNNNNGC 2 cut(s) 359, 2214
NciI CCSGG 4 cut(s) 209, 385, 555, 2358
NcoI CCATGG 1 cut(s) 647
NheI GCTAGC 1 cut(s) 1481
NlaIV GGNNCC 5 cut(s) 895, 921, 1236, 1434, 2019
NmeAIII GCCGAG 1 cut(s) 360
NmuCI GTSAC 1 cut(s) 736
NsbI TGCGCA 2 cut(s) 1004, 2271
NspI RCATGY 4 cut(s) 804, 1729, 2208, 2418
NspV TTCGAA 1 cut(s) 1264
PaeR7I CTCGAG 1 cut(s) 1821
PagI TCATGA 1 cut(s) 1623
PceI AGGCCT 1 cut(s) 507
PciI ACATGT 2 cut(s) 800, 2414
PctI GAATGC 1 cut(s) 1124
PdmI GAANNNNTTC 2 cut(s) 1233, 1619
PfeI GAWTC 8 cut(s) 257, 380, 866, 945, 1108, 1847, 1918, 2118
Pfl23II CGTACG 1 cut(s) 2004
PflMI CCANNNNNTGG 2 cut(s) 648, 653
PfoI TCCNGGA 1 cut(s) 383
PkrI GCNGC 5 cut(s) 320, 1022, 1196, 1276, 2305
Ple19I CGATCG 3 cut(s) 1880, 2439, 2443
PleI GAGTC 3 cut(s) 315, 766, 1739
PpsI GAGTC 3 cut(s) 315, 766, 1739
Ppu21I YACGTR 1 cut(s) 2004
PscI ACATGT 2 cut(s) 800, 2414
PshAI GACNNNNGTC 1 cut(s) 549
PsiI TTATAA 1 cut(s) 2315
Psp124BI GAGCTC 4 cut(s) 147, 375, 1169, 1455
Psp1406I AACGTT 1 cut(s) 1795
Psp6I CCWGG 2 cut(s) 160, 472
PspGI CCWGG 2 cut(s) 160, 472
PspLI CGTACG 1 cut(s) 2004
PspN4I GGNNCC 5 cut(s) 895, 921, 1236, 1434, 2019
PspPI GGNCC 1 cut(s) 1535
PspXI VCTCGAGB 1 cut(s) 1821
PstNI CAGNNNCTG 1 cut(s) 1277
PsuI RGATCY 2 cut(s) 682, 919
PvuI CGATCG 3 cut(s) 1880, 2439, 2443
PvuII CAGCTG 1 cut(s) 1274
RsaI GTAC 4 cut(s) 396, 910, 1153, 2006
RsaNI GTAC 4 cut(s) 395, 909, 1152, 2005
RseI CAYNNNNRTG 1 cut(s) 2493
SacI GAGCTC 4 cut(s) 147, 375, 1169, 1455
SaqAI TTAA 2 cut(s) 279, 1016
SatI GCNGC 5 cut(s) 319, 1021, 1195, 1275, 2304
Sau96I GGNCC 1 cut(s) 1535
SchI GAGTC 3 cut(s) 316, 767, 1739
ScrFI CCNGG 6 cut(s) 162, 209, 385, 474, 555, 2358
SduI GDGCHC 6 cut(s) 147, 375, 808, 1169, 1435, 1455
SfaNI GCATC 3 cut(s) 230, 394, 2256
SfcI CTRYAG 2 cut(s) 861, 1974
Sfr274I CTCGAG 1 cut(s) 1821
SfuI TTCGAA 1 cut(s) 1264
SlaI CTCGAG 1 cut(s) 1821
SmiMI CAYNNNNRTG 1 cut(s) 2493
SmlI CTYRAG 5 cut(s) 496, 769, 960, 1112, 1821
SmoI CTYRAG 5 cut(s) 496, 769, 960, 1112, 1821
SseBI AGGCCT 1 cut(s) 507
SsiI CCGC 3 cut(s) 669, 2037, 2303
SspMI CTAG 7 cut(s) 687, 992, 1482, 1742, 1851, 1943, 1947
SstI GAGCTC 4 cut(s) 147, 375, 1169, 1455
StuI AGGCCT 1 cut(s) 507
StyD4I CCNGG 6 cut(s) 160, 207, 383, 472, 553, 2356
StyI CCWWGG 2 cut(s) 647, 1606
TaaI ACNGT 8 cut(s) 179, 220, 367, 1145, 1477, 1975, 2009, 2157
TaiI ACGT 5 cut(s) 119, 738, 1271, 1798, 2006
TatI WGTACW 1 cut(s) 1151
TauI GCSGC 1 cut(s) 2306
TfiI GAWTC 8 cut(s) 257, 380, 866, 945, 1108, 1847, 1918, 2118
Tru1I TTAA 2 cut(s) 279, 1016
Tru9I TTAA 2 cut(s) 279, 1016
TscAI CASTG 2 cut(s) 821, 919
TseFI GTSAC 1 cut(s) 736
TseI GCWGC 4 cut(s) 318, 1020, 1194, 1274
Tsp45I GTSAC 1 cut(s) 736
TspGWI ACGGA 5 cut(s) 585, 633, 1505, 1578, 1749
TspRI CASTG 2 cut(s) 821, 919
Van91I CCANNNNNTGG 2 cut(s) 648, 653
XagI CCTNNNNNAGG 1 cut(s) 2388
XapI RAATTY 9 cut(s) 189, 388, 418, 535, 629, 973, 1052, 1084, 1926
XceI RCATGY 4 cut(s) 804, 1729, 2208, 2418
XhoI CTCGAG 1 cut(s) 1821
XmiI GTMKAC 2 cut(s) 714, 937
XmnI GAANNNNTTC 2 cut(s) 1233, 1619
XspI CTAG 7 cut(s) 687, 992, 1482, 1742, 1851, 1943, 1947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.