Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Reverse (-)

33664035 .. 33667760

Gene Structure 3726 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1231400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGTTCATCTTTTGTTTTCGTTGATGATCGGTACTAATTTGCTCTTCATGTTATCCACAATTTGCTTTGCAGTTAACAGCATTAGTCCCTCCCAGTCTGTTCGTGATGGCACGACCTTGGTTTCGAAAGATGGAAGCTTTGAGCTTGGTTTCTTCAATTCAGGTAGTTCCACGAACCGTTACTTGGGGATTTGGTACAAGAACATTCCAGTTAGAACTGTTGTTTGGGTTGCAAACCGATGCAACCCCATCAACGATTCTTCCGGCATGTTGATGATAAACGGCACAGGTAATCTTGTGCTGTTGGGTCAGAATAAGAGTGTCGTTTGGTGGACAAGCTCAGTTAAAAATGTCCAAAGTGCAAGGGTAGAGCTTTTGGATTCTGGTAATTTAGTCCTAAGAGATGTCGTCGCAGGAACCCATTTGTGGCAAAGCTTCGATTATCCTTCTGATACTTTGTTACCAGGAATGAAGATGGGATGGGACTTGAGGACTGGTGTGAAACGAAGTTTATCAGCATGGAAAAATTCAGAAGACCCTTGTCCGGGAGATTTCACTTACGGGATCCAAATGCAACTTAATACATATCCTGAGGCATATGTGCGTATAGGCACTGCAAAATACTATCGTACTGGCCCATGGAACGGACTGAGATTCAGTGGTTCACCAGAATTAAAGCCTAATCCACTTTACAGTTTCAAATTTGTGTATAATGAAGATGAAGTGTACTACATGTACAACCTTCAAGATAAGTCTGTAATCTCAAGAATAGTTTTGAACCAAACCACCAGGTCGCGTGATCGATTTACATGGATTGAAGCGGATCAAACTTGGAGGGCCTATTCATCGGTACCTAGGGACTTGTGTGATCATTATGGCTTCTGTGGAGCCAATGGAAAATGTATCATAGGTGAGAATCCAGTCTGCCAATGCCTGAAAGGATTCAGGCCTAAGTCCCAAGAAAAATGGAATTTAACCGACTGGTCTTTAGGATGTGTGCGGAAGAAACCACTGAGCTGCCATGGAAGAGATAAAGATGGGTTTCTTAAATTTTCTGGATTGAAATTACCAGATACTACACTTTCTTGGGTGAACAAAACTATAAATCTCGAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCATGTATGGCTTATACAAGCTCGGATATCAGAGGAGGAGGCACTGGTTGTGTCATCTGGTTCGGTGAGCTTACAGATATCAGGCAGTTTCTGGTTGGTGGGCAGGAGCTATATATTCGAATGTCAGCTTCTGAGTTAGACAATGATCGTCGATTGAAGACAGCAATGATAGTTGCAATTACCGTAGCAGCAATAATTTCTGGTCTTCTGTTAGCTGGATATTACATTCACCGAAGGAGGACAAAATTAAAAGTAAGAGAAACAAATCGGAACAATGAAGAGGACCTGGAGCTTCCGCTCTTTGACGTGACCACAATAGCAACTGCTACAGATAACTTTTCAAGCGATAACAAGCTCGGAGAAGGTGGTTTTGGATCTGTTTACAAGGGGACCCTGGCAGATGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCTGGCCAAGGATTTAATGAGTTCATGAATGAAGTTATACTGATTGCCAAGCTTCAGCACCGAAATCTCGTAAAGCTTCTTGGATGCTGTGTTCAAGGGGAGGAGAAAATGCTGATTTATGAATACATGCCCAACAAAAGCCTGGATTCCTTTCTTTTCGATCAAACAGGAGAATTGCTGTTAGATTGGCCTAAACGTTTCGACATTATTTGTGGAATTGCTCGGGGTCTCCTCTATCTGCATCAAGATTCCAGGCTAAGGATTATTCATAGAGATCTGAAAGCAAGTAATGTTTTACTTGATAATGAAATGAATCCAAAAATTTCAGACTTTGGTTTGGCTAGAATATTAGTTGGAGGTGATCAGATTGGCGGAAATACAAACAGAGTGGTTGGAACATACGGTTACATGGCACCAGAATATGCTCTTGATGGGCTATTTTCTGTCAAATCAGATGTCTTTAGCTTCGGTATTTTGGTCTTGGAGGTCATAAGTGGAATAAAAAACAAGGGATTCTACCATCCAAACCACAGCCAAAACCTTGTTGGACATGCGTGGAAATTATGGAACGAAGGCCGGCCTTTAGAACTTATTGATACATGTTTAGCAGGCTCATGTATGCTATCAGAAGCGTTACGTTGCATCCACGTTAGTCTCCTATGTGTGCAACATAATCCTGAGGACAGGCCAAACATGGCATCTGTGGTTATAATGTTGGGAAGTGAGATTGCATTGACTCACCCCAAACAACCTGGTTTCTTTACAAAAATGGAATCACACGAAGCAGGTAACCAATCATCTTCAACCAATGAAATATCAATTACGCTTTTGGAGCCTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

808

Amino Acids

90.46

Weight (kDa)

8.21

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	73 - 175	6.1e-36	D-mannose binding lectin
S_locus_glycop	PF00954	209 - 319	8.7e-31	S-locus glycoprotein domain
PAN_2	PF08276	340 - 408	9.2e-23	PAN-like domain
Pkinase	PF00069	495 - 706	8.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	497 - 763	1.4e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2291
Acc36I	ACCTGC	1 cut(s)	2357
Acc65I	GGTACC	1 cut(s)	850
AccB1I	GGYRCC	2 cut(s)	850, 1993
AccBSI	CCGCTC	1 cut(s)	1441
AccII	CGCG	1 cut(s)	796
AciI	CCGC	4 cut(s)	821, 1000, 1439, 1953
AclI	AACGTT	1 cut(s)	1777
AclWI	GGATC	4 cut(s)	559, 572, 831, 1525
AcoI	YGGCCR	1 cut(s)	1585
AcsI	RAATTY	5 cut(s)	526, 701, 970, 1049, 1902
AcuI	CTGAAG	1 cut(s)	1619
AfaI	GTAC	6 cut(s)	34, 197, 631, 728, 737, 852
AfiI	CCNNNNNNNGG	6 cut(s)	184, 426, 544, 545, 644, 1839
AflIII	ACRYGT	2 cut(s)	732, 2180
AjiI	CACGTC	1 cut(s)	1450
AjnI	CCWGG	7 cut(s)	463, 788, 1428, 1536, 1722, 1832, 2332
AjuI	GAANNNNNNNTTGG	6 cut(s)	167, 199, 208, 240, 1497, 1529
AloI	GAACNNNNNNTCC	2 cut(s)	1656, 1688
Alw26I	GTCTC	2 cut(s)	1814, 2240
AlwI	GGATC	4 cut(s)	559, 572, 831, 1525
AlwNI	CAGNNNCTG	2 cut(s)	1234, 1274
Ama87I	CYCGRG	2 cut(s)	1109, 1803
AoxI	GGCC	8 cut(s)	634, 837, 947, 1585, 1769, 2155, 2159, 2267
ApeKI	GCWGC	2 cut(s)	1017, 1331
ApoI	RAATTY	5 cut(s)	526, 701, 970, 1049, 1902
ArsI	GACNNNNNNTTYG	4 cut(s)	106, 138, 2022, 2054
Asp700I	GAANNNNTTC	1 cut(s)	941
Asp718I	GGTACC	1 cut(s)	850
AspA2I	CCTAGG	1 cut(s)	854
AspS9I	GGNCC	4 cut(s)	635, 837, 1426, 1533
AsuC2I	CCSGG	1 cut(s)	546
AsuHPI	GGTGA	7 cut(s)	657, 923, 1102, 1220, 1364, 1952, 2312
AsuII	TTCGAA	2 cut(s)	125, 1261
AvaI	CYCGRG	2 cut(s)	1109, 1803
AvaII	GGWCC	2 cut(s)	1426, 1533
AvrII	CCTAGG	1 cut(s)	854
AxyI	CCTNAGG	2 cut(s)	591, 2259
BalI	TGGCCA	1 cut(s)	1587
BamHI	GGATCC	1 cut(s)	564
BanI	GGYRCC	2 cut(s)	850, 1993
BbsI	GAAGAC	3 cut(s)	540, 1307, 1340
BbvI	GCAGC	2 cut(s)	1004, 1343
BccI	CCATC	9 cut(s)	101, 125, 257, 469, 474, 1031, 1538, 2006, 2109
BceAI	ACGGC	1 cut(s)	298
BciT130I	CCWGG	7 cut(s)	465, 790, 1430, 1538, 1724, 1834, 2334
BclI	TGATCA	2 cut(s)	868, 1942
BcnI	CCSGG	1 cut(s)	546
BcoDI	GTCTC	2 cut(s)	1814, 2240
BfaI	CTAG	2 cut(s)	855, 1923
BfmI	CTRYAG	1 cut(s)	1470
BfuAI	ACCTGC	1 cut(s)	2357
BglII	AGATCT	1 cut(s)	1855
BisI	GCNGC	2 cut(s)	1018, 1332
BlnI	CCTAGG	1 cut(s)	854
BlsI	GCNGC	2 cut(s)	1019, 1333
Bme1390I	CCNGG	8 cut(s)	465, 546, 790, 1430, 1538, 1724, 1834, 2334
Bme18I	GGWCC	2 cut(s)	1426, 1533
BmeT110I	CYCGRG	2 cut(s)	1109, 1803
BmgBI	CACGTC	1 cut(s)	1450
BmgT120I	GGNCC	4 cut(s)	635, 837, 1426, 1533
BmiI	GGNNCC	8 cut(s)	418, 566, 852, 889, 1534, 1535, 1995, 2415
BmrFI	CCNGG	8 cut(s)	465, 546, 790, 1430, 1538, 1724, 1834, 2334
BmrI	ACTGGG	1 cut(s)	88
BmsI	GCATC	5 cut(s)	230, 1655, 1831, 2232, 2288
BmuI	ACTGGG	1 cut(s)	88
BoxI	GACNNNNGTC	1 cut(s)	540
BpiI	GAAGAC	3 cut(s)	540, 1307, 1340
BpmI	CTGGAG	1 cut(s)	1451
Bpu10I	CCTNAGC	1 cut(s)	1838
Bpu14I	TTCGAA	2 cut(s)	125, 1261
BpuEI	CTTGAG	2 cut(s)	508, 748
BpuMI	CCSGG	1 cut(s)	546
Bsa29I	ATCGAT	1 cut(s)	802
BsaI	GGTCTC	1 cut(s)	1814
BsaJI	CCNNGG	6 cut(s)	117, 638, 854, 1021, 1536, 1588
Bsc4I	CCNNNNNNNGG	6 cut(s)	184, 426, 544, 545, 644, 1839
Bse118I	RCCGGY	1 cut(s)	2157
Bse1I	ACTGG	7 cut(s)	94, 209, 499, 637, 920, 986, 1192
Bse21I	CCTNAGG	2 cut(s)	591, 2259
Bse3DI	GCAATG	1 cut(s)	1314
BseBI	CCWGG	7 cut(s)	465, 790, 1430, 1538, 1724, 1834, 2334
BseCI	ATCGAT	1 cut(s)	802
BseDI	CCNNGG	6 cut(s)	117, 638, 854, 1021, 1536, 1588
BseGI	GGATG	5 cut(s)	485, 998, 1670, 2101, 2223
BseLI	CCNNNNNNNGG	6 cut(s)	184, 426, 544, 545, 644, 1839
BseMI	GCAATG	1 cut(s)	1314
BseMII	CTCAG	6 cut(s)	354, 582, 641, 1004, 1266, 2250
BseNI	ACTGG	7 cut(s)	94, 209, 499, 637, 920, 986, 1192
BseRI	GAGGAG	4 cut(s)	1191, 1194, 1697, 1802
BseXI	GCAGC	2 cut(s)	1004, 1343
Bsh1236I	CGCG	1 cut(s)	796
BshFI	GGCC	8 cut(s)	636, 839, 949, 1587, 1771, 2157, 2161, 2269
BshNI	GGYRCC	2 cut(s)	850, 1993
BshVI	ATCGAT	1 cut(s)	802
BsiHKCI	CYCGRG	2 cut(s)	1109, 1803
BsiSI	CCGG	3 cut(s)	264, 545, 2158
BslFI	GGGAC	5 cut(s)	72, 497, 872, 940, 1546
BslI	CCNNNNNNNGG	6 cut(s)	184, 426, 544, 545, 644, 1839
BsmAI	GTCTC	2 cut(s)	1814, 2240
BsmFI	GGGAC	5 cut(s)	72, 497, 872, 940, 1546
BsmI	GAATGC	1 cut(s)	1121
BsnI	GGCC	8 cut(s)	636, 839, 949, 1587, 1771, 2157, 2161, 2269
Bso31I	GGTCTC	1 cut(s)	1814
BsoBI	CYCGRG	2 cut(s)	1109, 1803
Bsp119I	TTCGAA	2 cut(s)	125, 1261
Bsp1407I	TGTACA	1 cut(s)	735
Bsp19I	CCATGG	2 cut(s)	638, 1021
BspACI	CCGC	4 cut(s)	821, 1000, 1439, 1953
BspANI	GGCC	8 cut(s)	636, 839, 949, 1587, 1771, 2157, 2161, 2269
BspCNI	CTCAG	6 cut(s)	353, 583, 642, 1005, 1267, 2251
BspDI	ATCGAT	1 cut(s)	802
BspFNI	CGCG	1 cut(s)	796
BspHI	TCATGA	1 cut(s)	1605
BspLI	GGNNCC	8 cut(s)	418, 566, 852, 889, 1534, 1535, 1995, 2415
BspMI	ACCTGC	1 cut(s)	2357
BspPI	GGATC	4 cut(s)	559, 572, 831, 1525
BspQI	GCTCTTC	1 cut(s)	50
BspT104I	TTCGAA	2 cut(s)	125, 1261
BspT107I	GGYRCC	2 cut(s)	850, 1993
BspTNI	GGTCTC	1 cut(s)	1814
BsrBI	CCGCTC	1 cut(s)	1441
BsrDI	GCAATG	1 cut(s)	1314
BsrFI	RCCGGY	1 cut(s)	2157
BsrGI	TGTACA	1 cut(s)	735
BsrI	ACTGG	7 cut(s)	94, 209, 499, 637, 920, 986, 1192
BssAI	RCCGGY	1 cut(s)	2157
BssECI	CCNNGG	6 cut(s)	117, 638, 854, 1021, 1536, 1588
BssT1I	CCWWGG	5 cut(s)	117, 638, 854, 1021, 1588
Bst2UI	CCWGG	7 cut(s)	465, 790, 1430, 1538, 1724, 1834, 2334
Bst4CI	ACNGT	6 cut(s)	179, 220, 695, 1142, 1327, 1985
Bst6I	CTCTTC	4 cut(s)	50, 1021, 1416, 1559
BstAUI	TGTACA	1 cut(s)	735
BstBI	TTCGAA	2 cut(s)	125, 1261
BstC8I	GCNNGC	2 cut(s)	2159, 2191
BstDEI	CTNAG	9 cut(s)	340, 398, 591, 650, 951, 1013, 1275, 1838, 2259
BstDSI	CCRYGG	2 cut(s)	638, 1021
BstEII	GGTNACC	1 cut(s)	2369
BstF5I	GGATG	5 cut(s)	485, 998, 1670, 2101, 2223
BstFNI	CGCG	1 cut(s)	796
BstMAI	GTCTC	2 cut(s)	1814, 2240
BstMWI	GCNNNNNNNGC	1 cut(s)	2413
BstNI	CCWGG	7 cut(s)	465, 790, 1430, 1538, 1724, 1834, 2334
BstNSI	RCATGY	5 cut(s)	271, 736, 1711, 2135, 2184
BstPAI	GACNNNNGTC	1 cut(s)	540
BstPI	GGTNACC	1 cut(s)	2369
BstSCI	CCNGG	8 cut(s)	463, 544, 788, 1428, 1536, 1722, 1832, 2332
BstSFI	CTRYAG	1 cut(s)	1470
BstUI	CGCG	1 cut(s)	796
BstV1I	GCAGC	2 cut(s)	1004, 1343
BstV2I	GAAGAC	3 cut(s)	540, 1307, 1340
BstX2I	RGATCY	3 cut(s)	564, 1517, 1855
BstYI	RGATCY	3 cut(s)	564, 1517, 1855
Bsu15I	ATCGAT	1 cut(s)	802
Bsu36I	CCTNAGG	2 cut(s)	591, 2259
BsuRI	GGCC	8 cut(s)	636, 839, 949, 1587, 1771, 2157, 2161, 2269
BsuTUI	ATCGAT	1 cut(s)	802
BtgI	CCRYGG	2 cut(s)	638, 1021
BtrI	CACGTC	1 cut(s)	1450
BtsCI	GGATG	5 cut(s)	485, 998, 1670, 2101, 2223
BtsI	GCAGTG	1 cut(s)	612
BtsIMutI	CAGTG	4 cut(s)	612, 664, 1010, 1185
BveI	ACCTGC	1 cut(s)	2357
Cac8I	GCNNGC	2 cut(s)	2159, 2191
CaiI	CAGNNNCTG	2 cut(s)	1234, 1274
CciI	TCATGA	1 cut(s)	1605
Cfr10I	RCCGGY	1 cut(s)	2157
Cfr13I	GGNCC	4 cut(s)	635, 837, 1426, 1533
ClaI	ATCGAT	1 cut(s)	802
CsiI	ACCWGGT	2 cut(s)	788, 2332
Csp6I	GTAC	6 cut(s)	33, 196, 630, 727, 736, 851
CspCI	CAANNNNNGTGG	2 cut(s)	1950, 1985
CviQI	GTAC	6 cut(s)	33, 196, 630, 727, 736, 851
DdeI	CTNAG	9 cut(s)	340, 398, 591, 650, 951, 1013, 1275, 1838, 2259
EaeI	YGGCCR	1 cut(s)	1585
Eam1104I	CTCTTC	4 cut(s)	50, 1021, 1416, 1559
EarI	CTCTTC	4 cut(s)	50, 1021, 1416, 1559
EciI	GGCGGA	1 cut(s)	1968
Eco130I	CCWWGG	5 cut(s)	117, 638, 854, 1021, 1588
Eco147I	AGGCCT	1 cut(s)	949
Eco31I	GGTCTC	1 cut(s)	1814
Eco32I	GATATC	2 cut(s)	1171, 1222
Eco47I	GGWCC	2 cut(s)	1426, 1533
Eco57I	CTGAAG	1 cut(s)	1619
Eco81I	CCTNAGG	2 cut(s)	591, 2259
Eco88I	CYCGRG	2 cut(s)	1109, 1803
Eco91I	GGTNACC	1 cut(s)	2369
EcoO109I	RGGNCCY	3 cut(s)	837, 1426, 1533
EcoO65I	GGTNACC	1 cut(s)	2369
EcoRII	CCWGG	7 cut(s)	463, 788, 1428, 1536, 1722, 1832, 2332
EcoRV	GATATC	2 cut(s)	1171, 1222
EcoT14I	CCWWGG	5 cut(s)	117, 638, 854, 1021, 1588
ErhI	CCWWGG	5 cut(s)	117, 638, 854, 1021, 1588
FaqI	GGGAC	5 cut(s)	72, 497, 872, 940, 1546
FauNDI	CATATG	1 cut(s)	598
FbaI	TGATCA	2 cut(s)	868, 1942
Fnu4HI	GCNGC	2 cut(s)	1018, 1332
FokI	GGATG	5 cut(s)	492, 1005, 1677, 2088, 2210
FseI	GGCCGGCC	1 cut(s)	2161
Fsp4HI	GCNGC	2 cut(s)	1018, 1332
FspBI	CTAG	2 cut(s)	855, 1923
GluI	GCNGC	2 cut(s)	1018, 1332
GsuI	CTGGAG	1 cut(s)	1451
HaeIII	GGCC	8 cut(s)	636, 839, 949, 1587, 1771, 2157, 2161, 2269
HapII	CCGG	3 cut(s)	264, 545, 2158
HincII	GTYRAC	1 cut(s)	76
HindII	GTYRAC	1 cut(s)	76
HindIII	AAGCTT	4 cut(s)	136, 433, 1631, 1655
HpaI	GTTAAC	1 cut(s)	76
HpaII	CCGG	3 cut(s)	264, 545, 2158
HphI	GGTGA	7 cut(s)	657, 923, 1102, 1220, 1364, 1952, 2312
Hpy166II	GTNNAC	6 cut(s)	76, 333, 665, 727, 1093, 1525
Hpy8I	GTNNAC	6 cut(s)	76, 333, 665, 727, 1093, 1525
Hpy99I	CGWCG	2 cut(s)	413, 1296
HpyAV	CCTTC	5 cut(s)	456, 752, 1371, 1499, 2147
HpyCH4III	ACNGT	6 cut(s)	179, 220, 695, 1142, 1327, 1985
HpyCH4IV	ACGT	4 cut(s)	1449, 1777, 2218, 2229
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2413
HpyF3I	CTNAG	9 cut(s)	340, 398, 591, 650, 951, 1013, 1275, 1838, 2259
HpySE526I	ACGT	4 cut(s)	1449, 1777, 2218, 2229
KflI	GGGWCCC	1 cut(s)	1533
KpnI	GGTACC	1 cut(s)	854
KroI	GCCGGC	1 cut(s)	2157
KroNI	GCCGGC	1 cut(s)	2159
Ksp22I	TGATCA	2 cut(s)	868, 1942
KspAI	GTTAAC	1 cut(s)	76
LguI	GCTCTTC	1 cut(s)	50
LmnI	GCTCC	4 cut(s)	887, 1249, 1432, 2413
Lsp1109I	GCAGC	2 cut(s)	1004, 1343
LweI	GCATC	5 cut(s)	230, 1655, 1831, 2232, 2288
MabI	ACCWGGT	2 cut(s)	788, 2332
MaeI	CTAG	2 cut(s)	855, 1923
MaeII	ACGT	4 cut(s)	1449, 1777, 2218, 2229
MaeIII	GTNAC	6 cut(s)	179, 459, 1450, 1985, 2214, 2369
MbiI	CCGCTC	1 cut(s)	1441
MflI	RGATCY	3 cut(s)	564, 1517, 1855
MlsI	TGGCCA	1 cut(s)	1587
MluNI	TGGCCA	1 cut(s)	1587
MlyI	GAGTC	1 cut(s)	2311
MmeI	TCCRAC	3 cut(s)	1915, 1954, 2107
Mox20I	TGGCCA	1 cut(s)	1587
MroNI	GCCGGC	1 cut(s)	2157
MroXI	GAANNNNTTC	1 cut(s)	941
MscI	TGGCCA	1 cut(s)	1587
MseI	TTAA	8 cut(s)	75, 345, 579, 674, 974, 1047, 1391, 1596
MslI	CAYNNNNRTG	1 cut(s)	272
Msp20I	TGGCCA	1 cut(s)	1587
MspI	CCGG	3 cut(s)	264, 545, 2158
MspR9I	CCNGG	8 cut(s)	465, 546, 790, 1430, 1538, 1724, 1834, 2334
Mva1269I	GAATGC	1 cut(s)	1121
MvaI	CCWGG	7 cut(s)	465, 790, 1430, 1538, 1724, 1834, 2334
MvnI	CGCG	1 cut(s)	796
MwoI	GCNNNNNNNGC	1 cut(s)	2413
NaeI	GCCGGC	1 cut(s)	2159
NciI	CCSGG	1 cut(s)	546
NcoI	CCATGG	2 cut(s)	638, 1021
NdeI	CATATG	1 cut(s)	598
NgoMIV	GCCGGC	1 cut(s)	2157
NlaIV	GGNNCC	8 cut(s)	418, 566, 852, 889, 1534, 1535, 1995, 2415
NmuCI	GTSAC	1 cut(s)	1450
NspI	RCATGY	5 cut(s)	271, 736, 1711, 2135, 2184
NspV	TTCGAA	2 cut(s)	125, 1261
PaeR7I	CTCGAG	1 cut(s)	1109
PagI	TCATGA	1 cut(s)	1605
PceI	AGGCCT	1 cut(s)	949
PciI	ACATGT	2 cut(s)	732, 2180
PciSI	GCTCTTC	1 cut(s)	50
PctI	GAATGC	1 cut(s)	1121
PdiI	GCCGGC	1 cut(s)	2159
PdmI	GAANNNNTTC	1 cut(s)	941
PfoI	TCCNGGA	1 cut(s)	544
PkrI	GCNGC	2 cut(s)	1019, 1333
PleI	GAGTC	1 cut(s)	2311
PpsI	GAGTC	1 cut(s)	2311
PpuMI	RGGWCCY	2 cut(s)	1426, 1533
PscI	ACATGT	2 cut(s)	732, 2180
PshAI	GACNNNNGTC	1 cut(s)	540
PsiI	TTATAA	1 cut(s)	2291
Psp1406I	AACGTT	1 cut(s)	1777
Psp5II	RGGWCCY	2 cut(s)	1426, 1533
Psp6I	CCWGG	7 cut(s)	463, 788, 1428, 1536, 1722, 1832, 2332
PspEI	GGTNACC	1 cut(s)	2369
PspGI	CCWGG	7 cut(s)	463, 788, 1428, 1536, 1722, 1832, 2332
PspN4I	GGNNCC	8 cut(s)	418, 566, 852, 889, 1534, 1535, 1995, 2415
PspPI	GGNCC	4 cut(s)	635, 837, 1426, 1533
PspPPI	RGGWCCY	2 cut(s)	1426, 1533
PstNI	CAGNNNCTG	2 cut(s)	1234, 1274
PsuI	RGATCY	3 cut(s)	564, 1517, 1855
RigI	GGCCGGCC	1 cut(s)	2161
RsaI	GTAC	6 cut(s)	34, 197, 631, 728, 737, 852
RsaNI	GTAC	6 cut(s)	33, 196, 630, 727, 736, 851
RseI	CAYNNNNRTG	1 cut(s)	272
SapI	GCTCTTC	1 cut(s)	50
SaqAI	TTAA	8 cut(s)	75, 345, 579, 674, 974, 1047, 1391, 1596
SatI	GCNGC	2 cut(s)	1018, 1332
Sau96I	GGNCC	4 cut(s)	635, 837, 1426, 1533
SchI	GAGTC	1 cut(s)	2311
ScrFI	CCNGG	8 cut(s)	465, 546, 790, 1430, 1538, 1724, 1834, 2334
SexAI	ACCWGGT	2 cut(s)	788, 2332
SfaNI	GCATC	5 cut(s)	230, 1655, 1831, 2232, 2288
SfcI	CTRYAG	1 cut(s)	1470
Sfr274I	CTCGAG	1 cut(s)	1109
SfuI	TTCGAA	2 cut(s)	125, 1261
SinI	GGWCC	2 cut(s)	1426, 1533
SlaI	CTCGAG	1 cut(s)	1109
SmiMI	CAYNNNNRTG	1 cut(s)	272
SmlI	CTYRAG	3 cut(s)	487, 763, 1109
SmoI	CTYRAG	3 cut(s)	487, 763, 1109
SseBI	AGGCCT	1 cut(s)	949
SsiI	CCGC	4 cut(s)	821, 1000, 1439, 1953
SspI	AATATT	1 cut(s)	1929
SspMI	CTAG	2 cut(s)	855, 1923
StuI	AGGCCT	1 cut(s)	949
StyD4I	CCNGG	8 cut(s)	463, 544, 788, 1428, 1536, 1722, 1832, 2332
StyI	CCWWGG	5 cut(s)	117, 638, 854, 1021, 1588
TaaI	ACNGT	6 cut(s)	179, 220, 695, 1142, 1327, 1985
TaiI	ACGT	4 cut(s)	1452, 1780, 2221, 2232
TaqI	TCGA	9 cut(s)	125, 438, 802, 1110, 1261, 1294, 1740, 1782, 2419
TatI	WGTACW	2 cut(s)	726, 735
Tru1I	TTAA	8 cut(s)	75, 345, 579, 674, 974, 1047, 1391, 1596
Tru9I	TTAA	8 cut(s)	75, 345, 579, 674, 974, 1047, 1391, 1596
TscAI	CASTG	4 cut(s)	619, 664, 1017, 1192
TseFI	GTSAC	1 cut(s)	1450
TseI	GCWGC	2 cut(s)	1017, 1331
Tsp45I	GTSAC	1 cut(s)	1450
TspGWI	ACGGA	1 cut(s)	660
TspRI	CASTG	4 cut(s)	619, 664, 1017, 1192
VpaK11BI	GGWCC	2 cut(s)	1426, 1533
XapI	RAATTY	5 cut(s)	526, 701, 970, 1049, 1902
XceI	RCATGY	5 cut(s)	271, 736, 1711, 2135, 2184
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1720, 2123
XhoI	CTCGAG	1 cut(s)	1109
XmaJI	CCTAGG	1 cut(s)	854
XmnI	GAANNNNTTC	1 cut(s)	941
XspI	CTAG	2 cut(s)	855, 1923

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.