Rw5G022960

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
32248334 .. 32252090
3757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G022960.1

Sequence Viewer

Length: 2469 bp
ATGGGTGATCTTTGTTTTCTGGTGTTTAGTACTAGTTTGCTCTTTCTGTTGTTCACAGGTTCATTTGCAGTTGACAGCATCAGTCCCTCGCAGTCTATTCATGATAACAGCAGCACCTTGGTTTCAAGTGATGGAAGCTTTGAGCTGGGGTTCTTTAGTCCAGGTAACTCAAAAAATCGTTACTTGGGAATTTGGTACAAAAACATCCCAGTTAAAACTGTTGTTTGGGTTGCAAATCGATGCAACCCGATTGATGACTCATCCGGTGTGTTGATGATAAACAGCACAGGATATCTTGTGCTGTTGGGTCAGAATCAGAGTGTTGTGTGGTGGACAAGCTTAGCTAAGTATGCACAGAGTACAATGGTACAGCTATTAGATTCTGGAAATTTAGTAGCAAGAGATGTGACAAATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAGGACAGGTCTTAAAAGGGGATTATCAGCATGGAAAAATTCAGAAGACCCATGTCCAGGGGAATTCACTTATGGGATTGAAATGGAACCTCATGCATATCCCGAGGCATATTTTCGGAAAGGTGGTGTGAAATATTATCGTTCTGGCCCATGGAATGGCCTAAGATTCAGTGGTGCACCAGAACTAAGGCCTAATCCAATTTATAGTTTCGACTTTGTGTATAATGATGATGAAGTGTACTACATTTACAAACTTCAAAACAAGTCTGTAATTTCAATCATGGTCTTAAACGAAACCACGAGCACACGCGATCGCCTTACATGGATTGCAGCAGAGCAAAGTTGGAGGGCCTATGCATCAGTACCTAGAGATTTCTGTGATCAATATGACCTCTGTGGAGCAAATGCAAATTGTATAATTAGTAACAATCCAGTCTGTCAATGTCTACAAGGATTCACTCCTAAGTCACCAGAGAAATGGAATTTGACAGACTGGTCACTTGGATGTATGCGCAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGACGGGTTTGTCAAGTTTACTAACTTGAAATTGCCGGATACTACACATTCTTGGGTGAACAAAAGTATGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCAGATATCAGAGCAGGAGGTTCTGGCTGCGCCATTTGGTTTGGCGATCTACTAGATATCAGAAACTTTCCGGGTGCTGGCCAGGATCTATACATTCGAATGTCAGCTTCAGAGATAGAAGATGATGATAAAGTGAACACAGGAGTTATAGTTGCTGTTGTGATAGCTGCAGTGTTTTCAGGAATGCTCTTAGTTGGCCACTATGTCTACCGAAGCAGGACCAAATTGAAAGCTAACATTAGGTTCATTTATGCTATATCAGAGACAGAGAAACGAGAAGAAAGGGCACAAAAGGAGGACCTGGAGCTCCCGCTCTTCAACATAAGCACAATAGCTAGTGCAACAGATAACTTTTCAGATGATATGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAGGGGGACACTGGCAGATGGACAAGAATTTGCTGTGAAGAGGCTTTCAAGCAGTTCTGGCCAAGGATTTAACGAGTTCATGAATGAAATTATAATGATCGCCAAACTTCAGCACAGAAATCTTGTAAAGATTCTTGGTTATTGTGTGCAAGAAGAGGAGAACATGCTGATGTATGAATACATGCCCAACAGAAGCCTGGACATCTTCATTTTTGATCAAACGAGGGAAGAACTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTTGGCTAGAATACTAGCTGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTCGGGACATATGGCTACATGGCACCTGAATATGCTGCTGATGGGCTATTTTCTGTGAAATCCGATGTCTTTAGCTTCGGCATATTGGTGCTGGAGATTATAAGTGGAAGGCGAAATAAGGGTTTTTATCATCCAGACGATAGCCATAATCTTATTGGAAATGCTTGGAGATTGTGGAATGAAGGAAGGCCTTTAGAATTGATTTATTCATGGTTAGACAGCTCATGTAATCTATCAGATGTGTTACGTTGCATTCAAGTTAGTCTTTTGTGCGTGCAACATCATCCTGAGGATCGGCCAAGCATGGCTTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGGCTCAACCTAAACAACCTGGTTTCTTTATGGAAAAGGAACATGAAGGAGGCCCTGATGTAGGTAATGAATCATCAACCAATGAAACATCCATTTCGCTTTTGGAAGCTCGGTAA

Protein Analysis

822

Amino Acids

92.39

Weight (kDa)

5.45

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 175 5e-35 D-mannose binding lectin
S_locus_glycop PF00954 209 - 319 1.2e-29 S-locus glycoprotein domain
PAN_2 PF08276 340 - 408 7.6e-23 PAN-like domain
Pkinase PF00069 507 - 719 9.5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 510 - 776 6.3e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1655, 2111, 2330
AasI GACNNNNNNGTC 2 cut(s) 982, 1043
Acc16I TGCGCA 1 cut(s) 1001
AccB1I GGYRCC 1 cut(s) 2032
AccB7I CCANNNNNTGG 1 cut(s) 644
AccBSI CCGCTC 1 cut(s) 1477
AccI GTMKAC 2 cut(s) 934, 1371
AccII CGCG 1 cut(s) 798
AciI CCGC 1 cut(s) 1475
AclI AACGTT 1 cut(s) 1816
AclWI GGATC 2 cut(s) 1257, 2310
AcoI YGGCCR 4 cut(s) 1243, 1360, 1621, 2306
AcsI RAATTY 7 cut(s) 189, 388, 526, 551, 970, 1589, 1941
AcuI CTGAAG 2 cut(s) 1257, 1655
AfaI GTAC 6 cut(s) 31, 197, 361, 369, 728, 852
AfiI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1878, 2414
AhlI ACTAGT 1 cut(s) 32
AjnI CCWGG 8 cut(s) 160, 544, 1020, 1245, 1464, 1758, 1871, 2371
AjuI GAANNNNNNNTTGG 4 cut(s) 1533, 1565, 2302, 2334
AloI GAACNNNNNNTCC 2 cut(s) 1127, 1159
Alw21I GWGCWC 3 cut(s) 667, 794, 1473
Alw26I GTCTC 2 cut(s) 1421, 1853
Alw44I GTGCAC 1 cut(s) 663
AlwI GGATC 2 cut(s) 1257, 2310
Ama87I CYCGRG 2 cut(s) 590, 1842
ApaLI GTGCAC 1 cut(s) 663
ApeKI GCWGC 6 cut(s) 111, 818, 1017, 1191, 1331, 2045
ApoI RAATTY 7 cut(s) 189, 388, 526, 551, 970, 1589, 1941
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
AsiSI GCGATCGC 1 cut(s) 802
AspLEI GCGC 2 cut(s) 1002, 1196
AspS9I GGNCC 6 cut(s) 635, 837, 1383, 1462, 1553, 2405
AsuC2I CCSGG 1 cut(s) 1236
AsuHPI GGTGA 3 cut(s) 17, 948, 1102
AsuII TTCGAA 1 cut(s) 1261
AvaI CYCGRG 2 cut(s) 590, 1842
AvaII GGWCC 3 cut(s) 1383, 1462, 1553
AxyI CCTNAGG 1 cut(s) 2298
BaeGI GKGCMC 2 cut(s) 667, 1453
BalI TGGCCA 3 cut(s) 1245, 1362, 1623
BanI GGYRCC 1 cut(s) 2032
BanII GRGCYC 1 cut(s) 1473
BauI CACGAG 1 cut(s) 787
BbsI GAAGAC 1 cut(s) 540
Bbv12I GWGCWC 3 cut(s) 667, 794, 1473
BbvI GCAGC 6 cut(s) 123, 830, 1004, 1178, 1318, 2032
BccI CCATC 5 cut(s) 125, 469, 474, 1574, 2045
BciT130I CCWGG 8 cut(s) 162, 546, 1022, 1247, 1466, 1760, 1873, 2373
BciVI GTATCC 1 cut(s) 1066
BclI TGATCA 2 cut(s) 868, 1777
BcnI CCSGG 1 cut(s) 1236
BcoDI GTCTC 2 cut(s) 1421, 1853
BcuI ACTAGT 1 cut(s) 32
BfaI CTAG 6 cut(s) 33, 855, 1217, 1500, 1962, 1970
BfmI CTRYAG 1 cut(s) 1332
BfuI GTATCC 1 cut(s) 1066
BglII AGATCT 1 cut(s) 1894
BisI GCNGC 6 cut(s) 112, 819, 1018, 1192, 1332, 2046
BlpI GCTNAGC 1 cut(s) 340
BlsI GCNGC 6 cut(s) 113, 820, 1019, 1193, 1333, 2047
BmcAI AGTACT 1 cut(s) 31
Bme1390I CCNGG 9 cut(s) 162, 546, 1022, 1236, 1247, 1466, 1760, 1873, 2373
Bme18I GGWCC 3 cut(s) 1383, 1462, 1553
BmeT110I CYCGRG 2 cut(s) 590, 1842
BmgT120I GGNCC 6 cut(s) 635, 837, 1383, 1462, 1553, 2405
BmiI GGNNCC 2 cut(s) 576, 2034
BmrFI CCNGG 9 cut(s) 162, 546, 1022, 1236, 1247, 1466, 1760, 1873, 2373
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 3 cut(s) 87, 230, 854
BmuI ACTGGG 1 cut(s) 203
BoxI GACNNNNGTC 1 cut(s) 540
BpiI GAAGAC 1 cut(s) 540
BpmI CTGGAG 4 cut(s) 1487, 1995, 2010, 2123
Bpu10I CCTNAGC 2 cut(s) 1013, 1877
Bpu1102I GCTNAGC 1 cut(s) 340
Bpu14I TTCGAA 1 cut(s) 1261
BpuMI CCSGG 1 cut(s) 1236
Bsa29I ATCGAT 1 cut(s) 238
BsaI GGTCTC 1 cut(s) 1853
BsaJI CCNNGG 5 cut(s) 117, 545, 591, 638, 1624
BsaWI WCCGGW 1 cut(s) 263
BsaXI ACNNNNNCTCC 2 cut(s) 1299, 1329
Bsc4I CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1878, 2414
Bse1I ACTGG 5 cut(s) 209, 920, 986, 1578, 1993
Bse21I CCTNAGG 1 cut(s) 2298
BseBI CCWGG 8 cut(s) 162, 546, 1022, 1247, 1466, 1760, 1873, 2373
BseCI ATCGAT 1 cut(s) 238
BseDI CCNNGG 5 cut(s) 117, 545, 591, 638, 1624
BseGI GGATG 7 cut(s) 204, 260, 485, 998, 2140, 2293, 2441
BseLI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1878, 2414
BseMII CTCAG 2 cut(s) 1179, 2289
BseNI ACTGG 5 cut(s) 209, 920, 986, 1578, 1993
BseRI GAGGAG 3 cut(s) 1733, 1841, 1992
BseSI GKGCMC 2 cut(s) 667, 1453
BseXI GCAGC 6 cut(s) 123, 830, 1004, 1178, 1318, 2032
BseYI CCCAGC 1 cut(s) 145
Bsh1236I CGCG 1 cut(s) 798
Bsh1285I CGRYCG 1 cut(s) 802
BshNI GGYRCC 1 cut(s) 2032
BshVI ATCGAT 1 cut(s) 238
BsiEI CGRYCG 1 cut(s) 802
BsiHKAI GWGCWC 3 cut(s) 667, 794, 1473
BsiHKCI CYCGRG 2 cut(s) 590, 1842
BsiSI CCGG 3 cut(s) 264, 1070, 1235
BslFI GGGAC 4 cut(s) 69, 497, 1582, 2029
BslI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1878, 2414
BsmAI GTCTC 2 cut(s) 1421, 1853
BsmFI GGGAC 4 cut(s) 69, 497, 1582, 2029
BsmI GAATGC 3 cut(s) 1121, 1353, 2262
Bso31I GGTCTC 1 cut(s) 1853
BsoBI CYCGRG 2 cut(s) 590, 1842
Bsp119I TTCGAA 1 cut(s) 1261
Bsp1286I GDGCHC 4 cut(s) 667, 794, 1453, 1473
Bsp1720I GCTNAGC 1 cut(s) 340
Bsp19I CCATGG 1 cut(s) 638
BspACI CCGC 1 cut(s) 1475
BspCNI CTCAG 2 cut(s) 1178, 2290
BspDI ATCGAT 1 cut(s) 238
BspFNI CGCG 1 cut(s) 798
BspHI TCATGA 2 cut(s) 100, 1641
BspLI GGNNCC 2 cut(s) 576, 2034
BspMAI CTGCAG 1 cut(s) 1336
BspPI GGATC 2 cut(s) 1257, 2310
BspQI GCTCTTC 1 cut(s) 1484
BspT104I TTCGAA 1 cut(s) 1261
BspT107I GGYRCC 1 cut(s) 2032
BspTNI GGTCTC 1 cut(s) 1853
BsrBI CCGCTC 1 cut(s) 1477
BsrI ACTGG 5 cut(s) 209, 920, 986, 1578, 1993
BssECI CCNNGG 5 cut(s) 117, 545, 591, 638, 1624
BssSI CACGAG 1 cut(s) 787
BssT1I CCWWGG 3 cut(s) 117, 638, 1624
Bst2BI CACGAG 1 cut(s) 787
Bst2UI CCWGG 8 cut(s) 162, 546, 1022, 1247, 1466, 1760, 1873, 2373
Bst4CI ACNGT 3 cut(s) 220, 1142, 1800
Bst6I CTCTTC 3 cut(s) 1484, 1595, 1710
BstBI TTCGAA 1 cut(s) 1261
BstC8I GCNNGC 2 cut(s) 1243, 2285
BstDSI CCRYGG 1 cut(s) 638
BstENI CCTNNNNNAGG 1 cut(s) 2412
BstF5I GGATG 7 cut(s) 204, 260, 485, 998, 2140, 2293, 2441
BstFNI CGCG 1 cut(s) 798
BstHHI GCGC 2 cut(s) 1002, 1196
BstMAI GTCTC 2 cut(s) 1421, 1853
BstMCI CGRYCG 1 cut(s) 802
BstMWI GCNNNNNNNGC 2 cut(s) 350, 1620
BstNI CCWGG 8 cut(s) 162, 546, 1022, 1247, 1466, 1760, 1873, 2373
BstNSI RCATGY 2 cut(s) 1729, 1747
BstPAI GACNNNNGTC 1 cut(s) 540
BstSCI CCNGG 9 cut(s) 160, 544, 1020, 1234, 1245, 1464, 1758, 1871, 2371
BstSFI CTRYAG 1 cut(s) 1332
BstSLI GKGCMC 2 cut(s) 667, 1453
BstUI CGCG 1 cut(s) 798
BstV1I GCAGC 6 cut(s) 123, 830, 1004, 1178, 1318, 2032
BstV2I GAAGAC 1 cut(s) 540
BstX2I RGATCY 2 cut(s) 1249, 1894
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 2 cut(s) 1249, 1894
Bsu15I ATCGAT 1 cut(s) 238
Bsu36I CCTNAGG 1 cut(s) 2298
BsuI GTATCC 1 cut(s) 1066
BsuTUI ATCGAT 1 cut(s) 238
BtgI CCRYGG 1 cut(s) 638
BtsCI GGATG 7 cut(s) 204, 260, 485, 998, 2140, 2293, 2441
BtsI GCAGTG 1 cut(s) 1341
BtsIMutI CAGTG 3 cut(s) 664, 1341, 1571
Cac8I GCNNGC 2 cut(s) 1243, 2285
CciI TCATGA 2 cut(s) 100, 1641
CfoI GCGC 2 cut(s) 1002, 1196
Cfr13I GGNCC 6 cut(s) 635, 837, 1383, 1462, 1553, 2405
ClaI ATCGAT 1 cut(s) 238
CsiI ACCWGGT 1 cut(s) 2371
Csp6I GTAC 6 cut(s) 30, 196, 360, 368, 727, 851
CspCI CAANNNNNGTGG 2 cut(s) 1811, 1846
CviQI GTAC 6 cut(s) 30, 196, 360, 368, 727, 851
DrdI GACNNNNNNGTC 2 cut(s) 982, 1043
DseDI GACNNNNNNGTC 2 cut(s) 982, 1043
EaeI YGGCCR 4 cut(s) 1243, 1360, 1621, 2306
Eam1104I CTCTTC 3 cut(s) 1484, 1595, 1710
EarI CTCTTC 3 cut(s) 1484, 1595, 1710
Ecl136II GAGCTC 1 cut(s) 1471
Eco130I CCWWGG 3 cut(s) 117, 638, 1624
Eco147I AGGCCT 2 cut(s) 679, 2200
Eco24I GRGCYC 1 cut(s) 1473
Eco31I GGTCTC 1 cut(s) 1853
Eco32I GATATC 3 cut(s) 293, 1171, 1222
Eco47I GGWCC 3 cut(s) 1383, 1462, 1553
Eco53kI GAGCTC 1 cut(s) 1471
Eco57I CTGAAG 2 cut(s) 1257, 1655
Eco81I CCTNAGG 1 cut(s) 2298
Eco88I CYCGRG 2 cut(s) 590, 1842
EcoICRI GAGCTC 1 cut(s) 1471
EcoNI CCTNNNNNAGG 1 cut(s) 2412
EcoO109I RGGNCCY 3 cut(s) 837, 1462, 2405
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 8 cut(s) 160, 544, 1020, 1245, 1464, 1758, 1871, 2371
EcoRV GATATC 3 cut(s) 293, 1171, 1222
EcoT14I CCWWGG 3 cut(s) 117, 638, 1624
EcoT22I ATGCAT 2 cut(s) 586, 847
EcoT38I GRGCYC 1 cut(s) 1473
ErhI CCWWGG 3 cut(s) 117, 638, 1624
FalI AAGNNNNNCTT 4 cut(s) 2259, 2291, 2302, 2334
FaqI GGGAC 4 cut(s) 69, 497, 1582, 2029
FauI CCCGC 1 cut(s) 1482
FauNDI CATATG 1 cut(s) 2020
FbaI TGATCA 2 cut(s) 868, 1777
FblI GTMKAC 2 cut(s) 934, 1371
Fnu4HI GCNGC 6 cut(s) 112, 819, 1018, 1192, 1332, 2046
FokI GGATG 7 cut(s) 191, 247, 492, 1005, 2127, 2280, 2428
FriOI GRGCYC 1 cut(s) 1473
Fsp4HI GCNGC 6 cut(s) 112, 819, 1018, 1192, 1332, 2046
FspBI CTAG 6 cut(s) 33, 855, 1217, 1500, 1962, 1970
FspI TGCGCA 1 cut(s) 1001
GlaI GCGC 2 cut(s) 1001, 1195
GluI GCNGC 6 cut(s) 112, 819, 1018, 1192, 1332, 2046
GsaI CCCAGC 1 cut(s) 149
GsuI CTGGAG 4 cut(s) 1487, 1995, 2010, 2123
HapII CCGG 3 cut(s) 264, 1070, 1235
HhaI GCGC 2 cut(s) 1002, 1196
Hin6I GCGC 2 cut(s) 1000, 1194
HinP1I GCGC 2 cut(s) 1000, 1194
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 4 cut(s) 136, 337, 433, 1532
HinfI GANTC 9 cut(s) 257, 313, 380, 654, 942, 1693, 1868, 1933, 2423
HpaII CCGG 3 cut(s) 264, 1070, 1235
HphI GGTGA 3 cut(s) 17, 948, 1102
Hpy188III TCNNGA 8 cut(s) 101, 384, 590, 1344, 1642, 2014, 2144, 2297
HpyAV CCTTC 6 cut(s) 456, 1535, 2112, 2186, 2190, 2393
HpyCH4III ACNGT 3 cut(s) 220, 1142, 1800
HpyCH4IV ACGT 2 cut(s) 1816, 2257
HpyF10VI GCNNNNNNNGC 2 cut(s) 350, 1620
HpySE526I ACGT 2 cut(s) 1816, 2257
HspAI GCGC 2 cut(s) 1000, 1194
Ksp22I TGATCA 2 cut(s) 868, 1777
LguI GCTCTTC 1 cut(s) 1484
LmnI GCTCC 3 cut(s) 887, 1468, 1476
Lsp1109I GCAGC 6 cut(s) 123, 830, 1004, 1178, 1318, 2032
LweI GCATC 3 cut(s) 87, 230, 854
MabI ACCWGGT 1 cut(s) 2371
MaeI CTAG 6 cut(s) 33, 855, 1217, 1500, 1962, 1970
MaeII ACGT 2 cut(s) 1816, 2257
MaeIII GTNAC 8 cut(s) 164, 179, 406, 459, 911, 954, 984, 2253
MbiI CCGCTC 1 cut(s) 1477
MboII GAAGA 9 cut(s) 484, 545, 1295, 1454, 1471, 1612, 1727, 1759, 1802
MflI RGATCY 2 cut(s) 1249, 1894
MhlI GDGCHC 4 cut(s) 667, 794, 1453, 1473
MlsI TGGCCA 3 cut(s) 1245, 1362, 1623
MluNI TGGCCA 3 cut(s) 1245, 1362, 1623
MlyI GAGTC 1 cut(s) 251
MmeI TCCRAC 1 cut(s) 812
Mox20I TGGCCA 3 cut(s) 1245, 1362, 1623
Mph1103I ATGCAT 2 cut(s) 586, 847
MscI TGGCCA 3 cut(s) 1245, 1362, 1623
MseI TTAA 4 cut(s) 213, 501, 776, 1632
MslI CAYNNNNRTG 4 cut(s) 991, 1262, 1730, 2096
Msp20I TGGCCA 3 cut(s) 1245, 1362, 1623
MspI CCGG 3 cut(s) 264, 1070, 1235
MspR9I CCNGG 9 cut(s) 162, 546, 1022, 1236, 1247, 1466, 1760, 1873, 2373
Mva1269I GAATGC 3 cut(s) 1121, 1353, 2262
MvaI CCWGG 8 cut(s) 162, 546, 1022, 1247, 1466, 1760, 1873, 2373
MvnI CGCG 1 cut(s) 798
MwoI GCNNNNNNNGC 2 cut(s) 350, 1620
NciI CCSGG 1 cut(s) 1236
NcoI CCATGG 1 cut(s) 638
NdeI CATATG 1 cut(s) 2020
NlaIV GGNNCC 2 cut(s) 576, 2034
NmuCI GTSAC 3 cut(s) 406, 954, 984
NsbI TGCGCA 1 cut(s) 1001
NsiI ATGCAT 2 cut(s) 586, 847
NspI RCATGY 2 cut(s) 1729, 1747
NspV TTCGAA 1 cut(s) 1261
PagI TCATGA 2 cut(s) 100, 1641
PceI AGGCCT 2 cut(s) 679, 2200
PciSI GCTCTTC 1 cut(s) 1484
PctI GAATGC 3 cut(s) 1121, 1353, 2262
PfeI GAWTC 8 cut(s) 313, 380, 654, 942, 1693, 1868, 1933, 2423
PflMI CCANNNNNTGG 1 cut(s) 644
PkrI GCNGC 6 cut(s) 113, 820, 1019, 1193, 1333, 2047
Ple19I CGATCG 1 cut(s) 802
PleI GAGTC 1 cut(s) 251
PpsI GAGTC 1 cut(s) 251
PpuMI RGGWCCY 1 cut(s) 1462
PshAI GACNNNNGTC 1 cut(s) 540
PsiI TTATAA 3 cut(s) 1655, 2111, 2330
Psp124BI GAGCTC 1 cut(s) 1473
Psp1406I AACGTT 1 cut(s) 1816
Psp5II RGGWCCY 1 cut(s) 1462
Psp6I CCWGG 8 cut(s) 160, 544, 1020, 1245, 1464, 1758, 1871, 2371
PspFI CCCAGC 1 cut(s) 145
PspGI CCWGG 8 cut(s) 160, 544, 1020, 1245, 1464, 1758, 1871, 2371
PspN4I GGNNCC 2 cut(s) 576, 2034
PspPI GGNCC 6 cut(s) 635, 837, 1383, 1462, 1553, 2405
PspPPI RGGWCCY 1 cut(s) 1462
PstI CTGCAG 1 cut(s) 1336
PsuI RGATCY 2 cut(s) 1249, 1894
PvuI CGATCG 1 cut(s) 802
RgaI GCGATCGC 1 cut(s) 802
RsaI GTAC 6 cut(s) 31, 197, 361, 369, 728, 852
RsaNI GTAC 6 cut(s) 30, 196, 360, 368, 727, 851
RseI CAYNNNNRTG 4 cut(s) 991, 1262, 1730, 2096
SacI GAGCTC 1 cut(s) 1473
SapI GCTCTTC 1 cut(s) 1484
SaqAI TTAA 4 cut(s) 213, 501, 776, 1632
SatI GCNGC 6 cut(s) 112, 819, 1018, 1192, 1332, 2046
Sau96I GGNCC 6 cut(s) 635, 837, 1383, 1462, 1553, 2405
ScaI AGTACT 1 cut(s) 31
SchI GAGTC 1 cut(s) 251
ScrFI CCNGG 9 cut(s) 162, 546, 1022, 1236, 1247, 1466, 1760, 1873, 2373
SduI GDGCHC 4 cut(s) 667, 794, 1453, 1473
SexAI ACCWGGT 1 cut(s) 2371
SfaAI GCGATCGC 1 cut(s) 802
SfaNI GCATC 3 cut(s) 87, 230, 854
SfcI CTRYAG 1 cut(s) 1332
SfuI TTCGAA 1 cut(s) 1261
SgfI GCGATCGC 1 cut(s) 802
SinI GGWCC 3 cut(s) 1383, 1462, 1553
SmiMI CAYNNNNRTG 4 cut(s) 991, 1262, 1730, 2096
SpeI ACTAGT 1 cut(s) 32
SseBI AGGCCT 2 cut(s) 679, 2200
SsiI CCGC 1 cut(s) 1475
SspI AATATT 1 cut(s) 623
SspMI CTAG 6 cut(s) 33, 855, 1217, 1500, 1962, 1970
SstI GAGCTC 1 cut(s) 1473
StuI AGGCCT 2 cut(s) 679, 2200
StyD4I CCNGG 9 cut(s) 160, 544, 1020, 1234, 1245, 1464, 1758, 1871, 2371
StyI CCWWGG 3 cut(s) 117, 638, 1624
TaaI ACNGT 3 cut(s) 220, 1142, 1800
TaiI ACGT 2 cut(s) 1819, 2260
TaqI TCGA 4 cut(s) 238, 438, 699, 1261
TatI WGTACW 3 cut(s) 29, 359, 726
TfiI GAWTC 8 cut(s) 313, 380, 654, 942, 1693, 1868, 1933, 2423
Tru1I TTAA 4 cut(s) 213, 501, 776, 1632
Tru9I TTAA 4 cut(s) 213, 501, 776, 1632
TscAI CASTG 3 cut(s) 664, 1341, 1578
TseFI GTSAC 3 cut(s) 406, 954, 984
TseI GCWGC 6 cut(s) 111, 818, 1017, 1191, 1331, 2045
Tsp45I GTSAC 3 cut(s) 406, 954, 984
TspRI CASTG 3 cut(s) 664, 1341, 1578
Van91I CCANNNNNTGG 1 cut(s) 644
VneI GTGCAC 1 cut(s) 663
VpaK11BI GGWCC 3 cut(s) 1383, 1462, 1553
XagI CCTNNNNNAGG 1 cut(s) 2412
XapI RAATTY 7 cut(s) 189, 388, 526, 551, 970, 1589, 1941
XceI RCATGY 2 cut(s) 1729, 1747
XcmI CCANNNNNNNNNTGG 4 cut(s) 1756, 1829, 2162, 2452
XmiI GTMKAC 2 cut(s) 934, 1371
XspI CTAG 6 cut(s) 33, 855, 1217, 1500, 1962, 1970
ZrmI AGTACT 1 cut(s) 31
Zsp2I ATGCAT 2 cut(s) 586, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.