RchiOBHm_Chr7g0222981

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
44609443 .. 44612662
3220 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19963

Sequence Viewer

Length: 2205 bp
ATGGATGATCTTTGTTTTGTGGTGTTTAGTACTAGTTTGTTCTCTCTGTTGTTCACAGGTTCATTTGCAGTTGACAGCATCAATCCGTTGCAGTCTATCAGTGATAATGGCAGCGCCTTGGTTTCAAGTGATGGAACATTTGAGTTGGGTTTCTTCAGTCCAGGTAACACGAAACATCGTTACTTGGGAATTTGGTACAAAAACATCCCAGTTAAAACTGTTGTTTGGGTTGCAAATCGATGCAAACCGATTGATGACTCATCCGGTGTGTTGATGATAAACAGCACAGGATATCTTGTGCTGTTGGGTCAGAATAAGACTGTTGTTTGGTGGACAAGTTTAGCCAAGTATGCACAGAGTACAATGGTACAGCTATTAGATTCTGGAAATTTAGTAGTGAGGGATGTGACAGATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAGGACAGGTCTTCAGAGGGGATTATCAGCATGGAAAAATTCAGAAGACCCATGTCCAGGGGAATTCACTTATGGGATTGAAATGGAACCTCATGCATACCCTGAGGCATATTTTCGGAAAGGTGGTCTGAAATTTTATCGTTCTGGCCCATGGAATGGCCTAAGATTCAGTGGCGCAGCAGCTCTAAGGTCTAATCCAATTTATAGTTTCGATTTTGTGCATAATGATGATGAAGTTTACTACATGTACAAACTTCAAAACAAGTCTGTAATTTCAATCGTGGTCTTAAATGGAACCACGAGTACGCGCCATCGCCTTACATGGATTGAAGCAGAGCAAACTTGGAGGGCCTATGCAATAGTACCTAGAGATTTCTGTGATCAATATGGCCTCTGTGGAGCAAATGCAGAGTGTATCGTTAGTAACAGTCCAGTATGTCAATGTCTACAAGGATTCACGCCCAAGTCACCAGAGAAATGGAATTTGACAGACTGGTCACTTGGATGTACGCGCAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGACGGGTTTGTCAAATTCACTGACTTGAAATTGCCAGATACTACACATTCTTGGGTGAACAAAAGTACGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGACATTAAAGCAGGAGGTTCTGGCTGCGCCATTTGGTTTGGTGATCTACTAGATATCAGAAAGATTCCGGATGCTGGCCAAGATCTATACATTCGAATGTCAGCTTCAGAGATAGAGACAGAAAAACGAGAAGAAGGGGCACAAAAGGAGGACCTGAAGCTCCCGATTTTCAACATAACCACGATAGCTACTGCTACAGATAACTTTTCAGATGATAAGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAAGGGGACACTAGCAGATGGACAAGAATTTGCTGTGAAGAGGCTTTCAAGCAGTTCTGGCCAAGGATTTAATGAGTTTAGGAATGAAATTATAATGATTGCCAAACTTCAGCACCGAAATCTTGTAAAGATTCTTGGTTGTTGTGTGCAAGAGGAGAAAATGCTGATGTACGAATACATGTCCAACGGAAGCCTGGACTACTTCATTTTTGATCAAACCAGGGAAGAACTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTTGGCTAGAATATTAACCGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTCGGGACATATGGCTACATGGCACCTGAATATGCTGCTGATGGGGCTTGGAGATTGTGGAATGAAGGAAGGCCTTTAGAATTGATTGATTCGTGGTTAAAGAGCTTATGTGATCTATCAGAAGTGTTACGTTGCATCCAAGTTAGTCTTTTGTGCGTCCAACATCATCCTGAGAATCGGCCGAGCATGGCGTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGGCTCAACCTAAACAACCTGGTTTCCTTCTGGAAAAGGAACATGAAGTAAGCCCTCGTATAGGTAATGAATTATCAACCAATGAAATATCCATTTCGCTTTTGGAAGCGCGGTAA

Protein Analysis

734

Amino Acids

82.41

Weight (kDa)

5.7

Isoelectric Point (pI)

42.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 175 8.6e-36 D-mannose binding lectin
S_locus_glycop PF00954 209 - 319 1.1e-28 S-locus glycoprotein domain
PAN_2 PF08276 340 - 408 5.4e-22 PAN-like domain
Pkinase PF00069 459 - 632 1.8e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 461 - 636 7.4e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1511, 2066
AasI GACNNNNNNGTC 2 cut(s) 982, 1043
AccB1I GGYRCC 1 cut(s) 1885
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 1 cut(s) 934
AccII CGCG 3 cut(s) 796, 1000, 2200
AccIII TCCGGA 1 cut(s) 1234
AciI CCGC 1 cut(s) 2200
AclI AACGTT 1 cut(s) 1669
AcoI YGGCCR 3 cut(s) 1243, 1477, 2042
AcsI RAATTY 9 cut(s) 189, 388, 526, 551, 620, 970, 1049, 1445, 1794
AcuI CTGAAG 5 cut(s) 139, 485, 1257, 1343, 1511
AcyI GRCGYC 1 cut(s) 2054
AfiI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1731, 2150
AflIII ACRYGT 2 cut(s) 732, 1596
AgsI TTSAA 9 cut(s) 126, 569, 746, 765, 818, 1063, 1135, 1339, 1467
AhlI ACTAGT 1 cut(s) 32
AjnI CCWGG 7 cut(s) 160, 544, 1020, 1611, 1637, 1724, 2107
AjuI GAANNNNNNNTTGG 2 cut(s) 1389, 1421
AloI GAACNNNNNNTCC 2 cut(s) 1127, 1159
Alw26I GTCTC 2 cut(s) 1277, 1706
Ama87I CYCGRG 1 cut(s) 1695
Aor13HI TCCGGA 1 cut(s) 1234
AoxI GGCC 9 cut(s) 634, 646, 837, 877, 1243, 1477, 1661, 1934, 2042
ApeKI GCWGC 6 cut(s) 111, 665, 668, 1017, 1191, 1898
ApoI RAATTY 9 cut(s) 189, 388, 526, 551, 620, 970, 1049, 1445, 1794
AspLEI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2200
AspS9I GGNCC 4 cut(s) 635, 837, 1318, 1409
AsuHPI GGTGA 3 cut(s) 948, 1102, 1220
AsuII TTCGAA 1 cut(s) 1261
AvaI CYCGRG 1 cut(s) 1695
AvaII GGWCC 2 cut(s) 1318, 1409
AxyI CCTNAGG 1 cut(s) 591
BaeGI GKGCMC 1 cut(s) 1309
BalI TGGCCA 2 cut(s) 1245, 1479
BanI GGYRCC 1 cut(s) 1885
BauI CACGAG 1 cut(s) 787
BbsI GAAGAC 2 cut(s) 491, 540
BbvI GCAGC 6 cut(s) 123, 677, 680, 1004, 1178, 1885
BccI CCATC 7 cut(s) 125, 407, 469, 474, 807, 1430, 1898
BciT130I CCWGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
BclI TGATCA 2 cut(s) 868, 1630
BcoDI GTCTC 2 cut(s) 1277, 1706
BcuI ACTAGT 1 cut(s) 32
BfaI CTAG 5 cut(s) 33, 855, 1217, 1430, 1815
BfmI CTRYAG 1 cut(s) 1362
BfoI RGCGCY 1 cut(s) 117
BglII AGATCT 2 cut(s) 1249, 1747
BisI GCNGC 6 cut(s) 112, 666, 669, 1018, 1192, 1899
BlsI GCNGC 6 cut(s) 113, 667, 670, 1019, 1193, 1900
BmcAI AGTACT 1 cut(s) 31
Bme1390I CCNGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
Bme18I GGWCC 2 cut(s) 1318, 1409
BmeT110I CYCGRG 1 cut(s) 1695
BmgT120I GGNCC 4 cut(s) 635, 837, 1318, 1409
BmiI GGNNCC 3 cut(s) 576, 784, 1887
BmrFI CCNGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 4 cut(s) 87, 230, 1228, 2007
BmuI ACTGGG 1 cut(s) 203
BoxI GACNNNNGTC 1 cut(s) 540
BpiI GAAGAC 2 cut(s) 491, 540
BpmI CTGGAG 1 cut(s) 1863
Bpu10I CCTNAGC 2 cut(s) 1013, 1730
Bpu14I TTCGAA 1 cut(s) 1261
Bsa29I ATCGAT 1 cut(s) 238
BsaHI GRCGYC 1 cut(s) 2054
BsaI GGTCTC 1 cut(s) 1706
BsaJI CCNNGG 5 cut(s) 117, 545, 638, 1480, 1638
BsaWI WCCGGW 3 cut(s) 263, 1234, 1826
Bsc4I CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1731, 2150
Bse1I ACTGG 4 cut(s) 209, 920, 986, 1846
Bse21I CCTNAGG 1 cut(s) 591
BseAI TCCGGA 1 cut(s) 1234
BseBI CCWGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
BseCI ATCGAT 1 cut(s) 238
BseDI CCNNGG 5 cut(s) 117, 545, 638, 1480, 1638
BseGI GGATG 9 cut(s) 10, 204, 260, 409, 485, 998, 1243, 1998, 2029
BseLI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1731, 2150
BseMII CTCAG 2 cut(s) 582, 2025
BseNI ACTGG 4 cut(s) 209, 920, 986, 1846
BseRI GAGGAG 3 cut(s) 1586, 1694, 1845
BseSI GKGCMC 1 cut(s) 1309
BseX3I CGGCCG 1 cut(s) 2042
BseXI GCAGC 6 cut(s) 123, 677, 680, 1004, 1178, 1885
Bsh1236I CGCG 3 cut(s) 796, 1000, 2200
Bsh1285I CGRYCG 1 cut(s) 2045
BshFI GGCC 9 cut(s) 636, 648, 839, 879, 1245, 1479, 1663, 1936, 2044
BshNI GGYRCC 1 cut(s) 1885
BshVI ATCGAT 1 cut(s) 238
BsiEI CGRYCG 1 cut(s) 2045
BsiHKCI CYCGRG 1 cut(s) 1695
BsiSI CCGG 3 cut(s) 264, 1235, 1827
BslFI GGGAC 3 cut(s) 497, 1438, 1882
BslI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1731, 2150
BsmAI GTCTC 2 cut(s) 1277, 1706
BsmFI GGGAC 3 cut(s) 497, 1438, 1882
BsmI GAATGC 1 cut(s) 1121
BsnI GGCC 9 cut(s) 636, 648, 839, 879, 1245, 1479, 1663, 1936, 2044
Bso31I GGTCTC 1 cut(s) 1706
BsoBI CYCGRG 1 cut(s) 1695
Bsp119I TTCGAA 1 cut(s) 1261
Bsp1286I GDGCHC 1 cut(s) 1309
Bsp13I TCCGGA 1 cut(s) 1234
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
Bsp19I CCATGG 1 cut(s) 638
BspACI CCGC 1 cut(s) 2200
BspANI GGCC 9 cut(s) 636, 648, 839, 879, 1245, 1479, 1663, 1936, 2044
BspCNI CTCAG 2 cut(s) 583, 2026
BspDI ATCGAT 1 cut(s) 238
BspEI TCCGGA 1 cut(s) 1234
BspFNI CGCG 3 cut(s) 796, 1000, 2200
BspLI GGNNCC 3 cut(s) 576, 784, 1887
BspT104I TTCGAA 1 cut(s) 1261
BspT107I GGYRCC 1 cut(s) 1885
BspTNI GGTCTC 1 cut(s) 1706
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 4 cut(s) 209, 920, 986, 1846
BssECI CCNNGG 5 cut(s) 117, 545, 638, 1480, 1638
BssMI GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
BssNI GRCGYC 1 cut(s) 2054
BssSI CACGAG 1 cut(s) 787
BssT1I CCWWGG 3 cut(s) 117, 638, 1480
Bst2BI CACGAG 1 cut(s) 787
Bst2UI CCWGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
Bst4CI ACNGT 5 cut(s) 220, 322, 917, 1142, 1653
Bst6I CTCTTC 1 cut(s) 1451
BstACI GRCGYC 1 cut(s) 2054
BstAUI TGTACA 1 cut(s) 735
BstBI TTCGAA 1 cut(s) 1261
BstC8I GCNNGC 1 cut(s) 1243
BstDEI CTNAG 7 cut(s) 591, 650, 674, 1013, 1730, 1854, 2034
BstDSI CCRYGG 1 cut(s) 638
BstENI CCTNNNNNAGG 1 cut(s) 2148
BstF5I GGATG 9 cut(s) 10, 204, 260, 409, 485, 998, 1243, 1998, 2029
BstFNI CGCG 3 cut(s) 796, 1000, 2200
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2200
BstKTI GATC 8 cut(s) 10, 871, 1213, 1252, 1633, 1750, 1837, 1978
BstMAI GTCTC 2 cut(s) 1277, 1706
BstMBI GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
BstMCI CGRYCG 1 cut(s) 2045
BstMWI GCNNNNNNNGC 3 cut(s) 350, 1476, 1907
BstNI CCWGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
BstNSI RCATGY 2 cut(s) 736, 1600
BstPAI GACNNNNGTC 1 cut(s) 540
BstSCI CCNGG 7 cut(s) 160, 544, 1020, 1611, 1637, 1724, 2107
BstSFI CTRYAG 1 cut(s) 1362
BstSLI GKGCMC 1 cut(s) 1309
BstUI CGCG 3 cut(s) 796, 1000, 2200
BstV1I GCAGC 6 cut(s) 123, 677, 680, 1004, 1178, 1885
BstV2I GAAGAC 2 cut(s) 491, 540
BstX2I RGATCY 2 cut(s) 1249, 1747
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 2 cut(s) 1249, 1747
BstZI CGGCCG 1 cut(s) 2042
Bsu15I ATCGAT 1 cut(s) 238
Bsu36I CCTNAGG 1 cut(s) 591
BsuRI GGCC 9 cut(s) 636, 648, 839, 879, 1245, 1479, 1663, 1936, 2044
BsuTUI ATCGAT 1 cut(s) 238
BtgI CCRYGG 1 cut(s) 638
BtgZI GCGATG 1 cut(s) 785
BtsCI GGATG 9 cut(s) 10, 204, 260, 409, 485, 998, 1243, 1998, 2029
BtsIMutI CAGTG 3 cut(s) 106, 664, 1053
Cac8I GCNNGC 1 cut(s) 1243
CfoI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2200
Cfr13I GGNCC 4 cut(s) 635, 837, 1318, 1409
ClaI ATCGAT 1 cut(s) 238
CseI GACGC 2 cut(s) 2008, 2043
CsiI ACCWGGT 1 cut(s) 2107
CspCI CAANNNNNGTGG 2 cut(s) 1664, 1699
DdeI CTNAG 7 cut(s) 591, 650, 674, 1013, 1730, 1854, 2034
DpnI GATC 8 cut(s) 9, 870, 1212, 1251, 1632, 1749, 1836, 1977
DpnII GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
DrdI GACNNNNNNGTC 2 cut(s) 982, 1043
DseDI GACNNNNNNGTC 2 cut(s) 982, 1043
EaeI YGGCCR 3 cut(s) 1243, 1477, 2042
EagI CGGCCG 1 cut(s) 2042
Eam1104I CTCTTC 1 cut(s) 1451
EarI CTCTTC 1 cut(s) 1451
EclXI CGGCCG 1 cut(s) 2042
Eco130I CCWWGG 3 cut(s) 117, 638, 1480
Eco147I AGGCCT 1 cut(s) 1936
Eco31I GGTCTC 1 cut(s) 1706
Eco32I GATATC 2 cut(s) 293, 1222
Eco47I GGWCC 2 cut(s) 1318, 1409
Eco52I CGGCCG 1 cut(s) 2042
Eco57I CTGAAG 5 cut(s) 139, 485, 1257, 1343, 1511
Eco81I CCTNAGG 1 cut(s) 591
Eco88I CYCGRG 1 cut(s) 1695
EcoNI CCTNNNNNAGG 1 cut(s) 2148
EcoO109I RGGNCCY 2 cut(s) 837, 1318
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 7 cut(s) 160, 544, 1020, 1611, 1637, 1724, 2107
EcoRV GATATC 2 cut(s) 293, 1222
EcoT14I CCWWGG 3 cut(s) 117, 638, 1480
EcoT22I ATGCAT 1 cut(s) 586
ErhI CCWWGG 3 cut(s) 117, 638, 1480
FalI AAGNNNNNCTT 2 cut(s) 1995, 2027
FaqI GGGAC 3 cut(s) 497, 1438, 1882
FauNDI CATATG 1 cut(s) 1873
FbaI TGATCA 2 cut(s) 868, 1630
FblI GTMKAC 1 cut(s) 934
Fnu4HI GCNGC 6 cut(s) 112, 666, 669, 1018, 1192, 1899
FokI GGATG 9 cut(s) 17, 191, 247, 416, 492, 1005, 1250, 1985, 2016
Fsp4HI GCNGC 6 cut(s) 112, 666, 669, 1018, 1192, 1899
FspBI CTAG 5 cut(s) 33, 855, 1217, 1430, 1815
GlaI GCGC 6 cut(s) 115, 664, 797, 1001, 1195, 2199
GluI GCNGC 6 cut(s) 112, 666, 669, 1018, 1192, 1899
GsuI CTGGAG 1 cut(s) 1863
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 9 cut(s) 636, 648, 839, 879, 1245, 1479, 1663, 1936, 2044
HapII CCGG 3 cut(s) 264, 1235, 1827
HgaI GACGC 2 cut(s) 2008, 2043
HhaI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2200
Hin1I GRCGYC 1 cut(s) 2054
Hin6I GCGC 6 cut(s) 114, 663, 796, 1000, 1194, 2198
HinP1I GCGC 6 cut(s) 114, 663, 796, 1000, 1194, 2198
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 2 cut(s) 433, 1388
HpaII CCGG 3 cut(s) 264, 1235, 1827
HphI GGTGA 3 cut(s) 948, 1102, 1220
Hpy166II GTNNAC 7 cut(s) 54, 73, 333, 727, 935, 1093, 1417
Hpy188III TCNNGA 6 cut(s) 384, 1235, 1330, 1867, 2033, 2120
Hpy8I GTNNAC 7 cut(s) 54, 73, 333, 727, 935, 1093, 1417
HpyAV CCTTC 6 cut(s) 456, 1295, 1391, 1922, 1926, 2126
HpyCH4III ACNGT 5 cut(s) 220, 322, 917, 1142, 1653
HpyCH4IV ACGT 2 cut(s) 1669, 1993
HpyF10VI GCNNNNNNNGC 3 cut(s) 350, 1476, 1907
HpyF3I CTNAG 7 cut(s) 591, 650, 674, 1013, 1730, 1854, 2034
HpySE526I ACGT 2 cut(s) 1669, 1993
Hsp92I GRCGYC 1 cut(s) 2054
HspAI GCGC 6 cut(s) 114, 663, 796, 1000, 1194, 2198
Kpn2I TCCGGA 1 cut(s) 1234
Ksp22I TGATCA 2 cut(s) 868, 1630
Kzo9I GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
LmnI GCTCC 2 cut(s) 887, 1332
Lsp1109I GCAGC 6 cut(s) 123, 677, 680, 1004, 1178, 1885
LweI GCATC 4 cut(s) 87, 230, 1228, 2007
MabI ACCWGGT 1 cut(s) 2107
MaeI CTAG 5 cut(s) 33, 855, 1217, 1430, 1815
MaeII ACGT 2 cut(s) 1669, 1993
MaeIII GTNAC 8 cut(s) 164, 179, 406, 459, 911, 954, 984, 1989
MalI GATC 8 cut(s) 9, 870, 1212, 1251, 1632, 1749, 1836, 1977
MboI GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
MboII GAAGA 7 cut(s) 145, 484, 491, 545, 1310, 1468, 1655
MflI RGATCY 2 cut(s) 1249, 1747
MhlI GDGCHC 1 cut(s) 1309
MlsI TGGCCA 2 cut(s) 1245, 1479
MluNI TGGCCA 2 cut(s) 1245, 1479
MlyI GAGTC 1 cut(s) 251
MmeI TCCRAC 2 cut(s) 1626, 2047
Mox20I TGGCCA 2 cut(s) 1245, 1479
Mph1103I ATGCAT 1 cut(s) 586
MroI TCCGGA 1 cut(s) 1234
MscI TGGCCA 2 cut(s) 1245, 1479
MseI TTAA 6 cut(s) 213, 776, 1173, 1488, 1823, 1961
MslI CAYNNNNRTG 3 cut(s) 714, 991, 1262
Msp20I TGGCCA 2 cut(s) 1245, 1479
MspI CCGG 3 cut(s) 264, 1235, 1827
MspR9I CCNGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
Mva1269I GAATGC 1 cut(s) 1121
MvaI CCWGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
MvnI CGCG 3 cut(s) 796, 1000, 2200
MwoI GCNNNNNNNGC 3 cut(s) 350, 1476, 1907
NcoI CCATGG 1 cut(s) 638
NdeI CATATG 1 cut(s) 1873
NdeII GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
NlaIV GGNNCC 3 cut(s) 576, 784, 1887
NmeAIII GCCGAG 1 cut(s) 2070
NmuCI GTSAC 3 cut(s) 406, 954, 984
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 2 cut(s) 736, 1600
NspV TTCGAA 1 cut(s) 1261
PceI AGGCCT 1 cut(s) 1936
PciI ACATGT 2 cut(s) 732, 1596
PctI GAATGC 1 cut(s) 1121
PfeI GAWTC 9 cut(s) 380, 654, 942, 1231, 1549, 1721, 1786, 1952, 2038
PflMI CCANNNNNTGG 1 cut(s) 644
PkrI GCNGC 6 cut(s) 113, 667, 670, 1019, 1193, 1900
PleI GAGTC 1 cut(s) 251
PpsI GAGTC 1 cut(s) 251
PpuMI RGGWCCY 1 cut(s) 1318
PscI ACATGT 2 cut(s) 732, 1596
PshAI GACNNNNGTC 1 cut(s) 540
PsiI TTATAA 2 cut(s) 1511, 2066
Psp1406I AACGTT 1 cut(s) 1669
Psp5II RGGWCCY 1 cut(s) 1318
Psp6I CCWGG 7 cut(s) 160, 544, 1020, 1611, 1637, 1724, 2107
PspGI CCWGG 7 cut(s) 160, 544, 1020, 1611, 1637, 1724, 2107
PspN4I GGNNCC 3 cut(s) 576, 784, 1887
PspPI GGNCC 4 cut(s) 635, 837, 1318, 1409
PspPPI RGGWCCY 1 cut(s) 1318
PsrI GAACNNNNNNTAC 2 cut(s) 775, 807
PsuI RGATCY 2 cut(s) 1249, 1747
RseI CAYNNNNRTG 3 cut(s) 714, 991, 1262
SaqAI TTAA 6 cut(s) 213, 776, 1173, 1488, 1823, 1961
SatI GCNGC 6 cut(s) 112, 666, 669, 1018, 1192, 1899
Sau3AI GATC 8 cut(s) 7, 868, 1210, 1249, 1630, 1747, 1834, 1975
Sau96I GGNCC 4 cut(s) 635, 837, 1318, 1409
ScaI AGTACT 1 cut(s) 31
SchI GAGTC 1 cut(s) 251
ScrFI CCNGG 7 cut(s) 162, 546, 1022, 1613, 1639, 1726, 2109
SduI GDGCHC 1 cut(s) 1309
SexAI ACCWGGT 1 cut(s) 2107
SfaNI GCATC 4 cut(s) 87, 230, 1228, 2007
SfcI CTRYAG 1 cut(s) 1362
SfuI TTCGAA 1 cut(s) 1261
SinI GGWCC 2 cut(s) 1318, 1409
SmiMI CAYNNNNRTG 3 cut(s) 714, 991, 1262
SpeI ACTAGT 1 cut(s) 32
SseBI AGGCCT 1 cut(s) 1936
SsiI CCGC 1 cut(s) 2200
SspI AATATT 1 cut(s) 1821
SspMI CTAG 5 cut(s) 33, 855, 1217, 1430, 1815
StuI AGGCCT 1 cut(s) 1936
StyD4I CCNGG 7 cut(s) 160, 544, 1020, 1611, 1637, 1724, 2107
StyI CCWWGG 3 cut(s) 117, 638, 1480
TaaI ACNGT 5 cut(s) 220, 322, 917, 1142, 1653
TaiI ACGT 2 cut(s) 1672, 1996
TaqI TCGA 4 cut(s) 238, 438, 699, 1261
TatI WGTACW 3 cut(s) 29, 359, 735
TfiI GAWTC 9 cut(s) 380, 654, 942, 1231, 1549, 1721, 1786, 1952, 2038
Tru1I TTAA 6 cut(s) 213, 776, 1173, 1488, 1823, 1961
Tru9I TTAA 6 cut(s) 213, 776, 1173, 1488, 1823, 1961
TscAI CASTG 3 cut(s) 106, 664, 1060
TseFI GTSAC 3 cut(s) 406, 954, 984
TseI GCWGC 6 cut(s) 111, 665, 668, 1017, 1191, 1898
Tsp45I GTSAC 3 cut(s) 406, 954, 984
TspGWI ACGGA 2 cut(s) 75, 1620
TspRI CASTG 3 cut(s) 106, 664, 1060
Van91I CCANNNNNTGG 1 cut(s) 644
VpaK11BI GGWCC 2 cut(s) 1318, 1409
XagI CCTNNNNNAGG 1 cut(s) 2148
XapI RAATTY 9 cut(s) 189, 388, 526, 551, 620, 970, 1049, 1445, 1794
XceI RCATGY 2 cut(s) 736, 1600
XcmI CCANNNNNNNNNTGG 3 cut(s) 1609, 1682, 2188
XmiI GTMKAC 1 cut(s) 934
XspI CTAG 5 cut(s) 33, 855, 1217, 1430, 1815
ZrmI AGTACT 1 cut(s) 31
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.