RLG00000002006

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
24227315 .. 24230589
3275 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002006

Sequence Viewer

Length: 2319 bp
ATGGGTGATCTTTGTTTTGTGGTGCTTAGTATTAGTTTGTTCTTTCTGTTGTTCACTGGTTCATTTGCAGTTGACAGCATCAATCCGTCGCAGTCTATCAGTGATAATGGCAGCGCCTTGGTTTCAAGTGATGGAACATTTGAGTTGGGTTTCTTCAGTCCAGGTAACACGAAACATCGTTACTTGGGAATTTGGTACAAAAACATCCCAGTTAAAACTGTTGTTTGGGTTGCAAATCGATGCAAACCGATTGATGACTCATCCGGTGTGTTGATGATAAACAGCACAGGATGTCTTGTGCTGTTGGGTCAGAATAAGAGTGTTGTTTGGTGGACAAGTTTAGCTAAGTATGCACAGAGTACAATGGTACAGCTATTAGATTCTGGAAATTTAGTAGTGAGGGATGTGACAGATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAGGACAGGTCTTAAGAGGGGATTATCAGCATGGAAAAATTCAGAAGACCCTTGTCCAGGGGAATTCACTTATGGGATTGAAATGGAATCTCATGCATACCCTGAGGCATATTTTCGGAAAGGTGGTCTGAAATTTTATCGTTCTGGCCCATGGAATGGCCTAAGATTCAGTGGCGCACCAGCTCTAAGGCCTAATCCAATTTATAGTTTCGACTTTGTGTATAATGATGATGAAGTTTACTACATGTACAAACTTCAAAGCAAGTCTGAAATTTCAATCGTAGTTTTAAATGGAACCACGAGTACGCGCCATCGCCTTACATGGATTGAAGCAGAGCAAACTTGGAGGGCTTATGCAATGGTACCTAGAGATTTCTGTGATCAATATGACCTCTGTGGAGCAAATGCAGAGTGTATCGTTACTAACAATCCAGTATGTCAATGTCTACAAGGATTCACGCCCAAGTCACTAAAGAAATGGAATTTGACAGACTGGTCACTTGGATGTACGCGCAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGACGGGTTTGTCAAATTCACTGACTTGAAATTGCCAGATACTACACATTCTTGGGTGAACAAAAGTATGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGACATTAGAGCAGGAGGTTCTGGCTGCGCCATTTGGTTTGGTGATCTACTAGATATCAGAAAGATTCCGGATGCTGGCCAAGATATATACATTCGAATGTCAGCTTCAGAGATAGAAGATGATGGTAAAGTGAAGACGGGAATTATAGTTGCTGTTGTGATAGCTGCAGGGTTTTCAGGAATAATCTTAATTGGCTACCACGTGTACCGAAGCAGGACCAAATTAAAAGGTAGATTAAATTTGAAAAAATTTGGGACACTAGCAGATGGAAAAGAATTTGCTGTGAAGAGGCTTTCAAGCAGTTCTAGCCAAGGAATTAATGAGTTTAGGAATGAAATTATAATGATTGCCAAACTTCAGCACCGAAATCTTGTAAAGATTCTGGGTTGTTGTGTGCAAGAGGAGAAAATGCTGATGTACGAATACATGTCCAACGGAAGCCTGGACAACTTCATTTTTGATCAAACAAGGGAAGAACTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTTGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTTGGCTAGAATATTAACCGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTCGGGACATATGGCTACATGGCACCTGAATATGCTACTGCTGGGGTATTTTCTGTGAAATCCGATGTCTTTAGCTTCGGTATATTGGTGCTAGAGATTATAAGTGGAAGGAGAAGCAAAGGATTTTATCATCCAGACCACAGCCATAATCTTATTGGAAATGCTTGGAGATTGTGGAATGAAGGAAGGCCTTTAGAATTGATTGATTCGTGGTTAAAGAGCCTATGTGATCTATCAGAAGTGTTACGCTGCATCCAAGTTAGTCTTTTGTGCGTTCAACATCATCCTGAAAATCGGCCAAGCATGGCGTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGGCTCAACCTAAACAACCTGGTTTCTTTCTGGAAAAGGAACGTGAAGCAAGCCCTGATATAGGTAATGAATTATCAACCAATGAAATATCCATTTCGGTTTTGGAAGCGCGGTAA

Protein Analysis

773

Amino Acids

86.66

Weight (kDa)

7.44

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 73 - 175 8.1e-36 D-mannose binding lectin
S_locus_glycop PF00954 209 - 319 1.1e-28 S-locus glycoprotein domain
PAN_2 PF08276 340 - 408 1.8e-22 PAN-like domain
Pkinase PF00069 477 - 724 1.7e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 479 - 726 5.5e-42 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 734 - 772 7.1e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1508, 1961, 2180
AasI GACNNNNNNGTC 2 cut(s) 982, 1043
Acc65I GGTACC 1 cut(s) 850
AccB1I GGYRCC 2 cut(s) 850, 1882
AccB7I CCANNNNNTGG 1 cut(s) 644
AccI GTMKAC 1 cut(s) 934
AccII CGCG 3 cut(s) 796, 1000, 2314
AccIII TCCGGA 1 cut(s) 1234
AciI CCGC 1 cut(s) 2314
AclI AACGTT 1 cut(s) 1666
AcoI YGGCCR 2 cut(s) 1243, 2156
AcuI CTGAAG 3 cut(s) 139, 1257, 1508
AcvI CACGTG 1 cut(s) 1369
AcyI GRCGYC 1 cut(s) 2168
AfaI GTAC 9 cut(s) 197, 361, 369, 737, 793, 852, 997, 1373, 1586
AfiI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1728, 2264
AflII CTTAAG 1 cut(s) 500
AflIII ACRYGT 3 cut(s) 732, 1368, 1593
AjnI CCWGG 6 cut(s) 160, 544, 1020, 1608, 1721, 2221
AloI GAACNNNNNNTCC 2 cut(s) 1127, 1159
AluBI AGCT 9 cut(s) 344, 373, 435, 671, 1017, 1164, 1271, 1331, 1935
AluI AGCT 9 cut(s) 344, 373, 435, 671, 1017, 1164, 1271, 1331, 1935
Alw26I GTCTC 1 cut(s) 1703
Aor13HI TCCGGA 1 cut(s) 1234
AoxI GGCC 7 cut(s) 634, 646, 677, 1243, 1658, 2048, 2156
ApeKI GCWGC 5 cut(s) 111, 1017, 1191, 1331, 2109
AseI ATTAAT 1 cut(s) 1485
Asp718I GGTACC 1 cut(s) 850
AspLEI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2314
AspS9I GGNCC 2 cut(s) 635, 1383
AsuHPI GGTGA 3 cut(s) 17, 1102, 1220
AsuII TTCGAA 1 cut(s) 1261
AvaII GGWCC 1 cut(s) 1383
AxyI CCTNAGG 1 cut(s) 591
BalI TGGCCA 1 cut(s) 1245
BanI GGYRCC 2 cut(s) 850, 1882
BauI CACGAG 1 cut(s) 787
BbrPI CACGTG 1 cut(s) 1369
BbsI GAAGAC 2 cut(s) 540, 1307
BbvI GCAGC 5 cut(s) 123, 1004, 1178, 1318, 2096
BccI CCATC 7 cut(s) 125, 407, 469, 474, 807, 1283, 1427
BciT130I CCWGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
BclI TGATCA 2 cut(s) 868, 1627
BcoDI GTCTC 1 cut(s) 1703
BfaI CTAG 6 cut(s) 855, 1217, 1427, 1473, 1812, 1952
BfmI CTRYAG 1 cut(s) 1332
BfoI RGCGCY 1 cut(s) 117
BfrI CTTAAG 1 cut(s) 500
BglII AGATCT 1 cut(s) 1744
BisI GCNGC 5 cut(s) 112, 1018, 1192, 1332, 2110
BlsI GCNGC 5 cut(s) 113, 1019, 1193, 1333, 2111
Bme1390I CCNGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
Bme18I GGWCC 1 cut(s) 1383
BmgT120I GGNCC 2 cut(s) 635, 1383
BmiI GGNNCC 3 cut(s) 784, 852, 1884
BmrFI CCNGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 4 cut(s) 87, 230, 1228, 2121
BmuI ACTGGG 1 cut(s) 203
BoxI GACNNNNGTC 1 cut(s) 540
BpiI GAAGAC 2 cut(s) 540, 1307
BpmI CTGGAG 1 cut(s) 1860
Bpu10I CCTNAGC 2 cut(s) 1013, 1727
Bpu14I TTCGAA 1 cut(s) 1261
Bsa29I ATCGAT 1 cut(s) 238
BsaAI YACGTR 1 cut(s) 1369
BsaHI GRCGYC 1 cut(s) 2168
BsaI GGTCTC 1 cut(s) 1703
BsaJI CCNNGG 4 cut(s) 117, 545, 638, 1477
BsaWI WCCGGW 3 cut(s) 263, 1234, 1823
Bsc4I CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1728, 2264
Bse1I ACTGG 5 cut(s) 61, 209, 920, 986, 1843
Bse21I CCTNAGG 1 cut(s) 591
Bse3DI GCAATG 1 cut(s) 852
BseAI TCCGGA 1 cut(s) 1234
BseBI CCWGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
BseCI ATCGAT 1 cut(s) 238
BseDI CCNNGG 4 cut(s) 117, 545, 638, 1477
BseLI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1728, 2264
BseMI GCAATG 1 cut(s) 852
BseMII CTCAG 1 cut(s) 582
BseNI ACTGG 5 cut(s) 61, 209, 920, 986, 1843
BseRI GAGGAG 3 cut(s) 1583, 1691, 1842
BseXI GCAGC 5 cut(s) 123, 1004, 1178, 1318, 2096
BseYI CCCAGC 1 cut(s) 1901
Bsh1236I CGCG 3 cut(s) 796, 1000, 2314
BshFI GGCC 7 cut(s) 636, 648, 679, 1245, 1660, 2050, 2158
BshNI GGYRCC 2 cut(s) 850, 1882
BshVI ATCGAT 1 cut(s) 238
BsiSI CCGG 3 cut(s) 264, 1235, 1824
BslFI GGGAC 3 cut(s) 497, 1435, 1879
BslI CCNNNNNNNGG 5 cut(s) 545, 644, 1241, 1728, 2264
BsmAI GTCTC 1 cut(s) 1703
BsmFI GGGAC 3 cut(s) 497, 1435, 1879
BsmI GAATGC 1 cut(s) 1121
BsnI GGCC 7 cut(s) 636, 648, 679, 1245, 1660, 2050, 2158
Bso31I GGTCTC 1 cut(s) 1703
Bsp119I TTCGAA 1 cut(s) 1261
Bsp13I TCCGGA 1 cut(s) 1234
Bsp1407I TGTACA 1 cut(s) 735
Bsp143I GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
Bsp19I CCATGG 1 cut(s) 638
BspACI CCGC 1 cut(s) 2314
BspANI GGCC 7 cut(s) 636, 648, 679, 1245, 1660, 2050, 2158
BspCNI CTCAG 1 cut(s) 583
BspDI ATCGAT 1 cut(s) 238
BspEI TCCGGA 1 cut(s) 1234
BspFNI CGCG 3 cut(s) 796, 1000, 2314
BspLI GGNNCC 3 cut(s) 784, 852, 1884
BspMAI CTGCAG 1 cut(s) 1336
BspT104I TTCGAA 1 cut(s) 1261
BspT107I GGYRCC 2 cut(s) 850, 1882
BspTI CTTAAG 1 cut(s) 500
BspTNI GGTCTC 1 cut(s) 1703
BsrDI GCAATG 1 cut(s) 852
BsrGI TGTACA 1 cut(s) 735
BsrI ACTGG 5 cut(s) 61, 209, 920, 986, 1843
BssECI CCNNGG 4 cut(s) 117, 545, 638, 1477
BssMI GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
BssNI GRCGYC 1 cut(s) 2168
BssSI CACGAG 1 cut(s) 787
BssT1I CCWWGG 3 cut(s) 117, 638, 1477
Bst2BI CACGAG 1 cut(s) 787
Bst2UI CCWGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
Bst4CI ACNGT 3 cut(s) 220, 1142, 1650
Bst6I CTCTTC 1 cut(s) 1448
BstACI GRCGYC 1 cut(s) 2168
BstAFI CTTAAG 1 cut(s) 500
BstAUI TGTACA 1 cut(s) 735
BstBAI YACGTR 1 cut(s) 1369
BstBI TTCGAA 1 cut(s) 1261
BstC8I GCNNGC 2 cut(s) 1243, 2254
BstDEI CTNAG 8 cut(s) 26, 345, 591, 650, 674, 1013, 1727, 1851
BstDSI CCRYGG 1 cut(s) 638
BstENI CCTNNNNNAGG 2 cut(s) 543, 2262
BstFNI CGCG 3 cut(s) 796, 1000, 2314
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2314
BstKTI GATC 7 cut(s) 10, 871, 1213, 1630, 1747, 1834, 2092
BstMAI GTCTC 1 cut(s) 1703
BstMBI GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
BstMWI GCNNNNNNNGC 2 cut(s) 350, 1473
BstNI CCWGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
BstNSI RCATGY 2 cut(s) 736, 1597
BstPAI GACNNNNGTC 1 cut(s) 540
BstSCI CCNGG 6 cut(s) 160, 544, 1020, 1608, 1721, 2221
BstSFI CTRYAG 1 cut(s) 1332
BstUI CGCG 3 cut(s) 796, 1000, 2314
BstV1I GCAGC 5 cut(s) 123, 1004, 1178, 1318, 2096
BstV2I GAAGAC 2 cut(s) 540, 1307
BstX2I RGATCY 1 cut(s) 1744
BstYI RGATCY 1 cut(s) 1744
Bsu15I ATCGAT 1 cut(s) 238
Bsu36I CCTNAGG 1 cut(s) 591
BsuRI GGCC 7 cut(s) 636, 648, 679, 1245, 1660, 2050, 2158
BsuTUI ATCGAT 1 cut(s) 238
BtgI CCRYGG 1 cut(s) 638
BtgZI GCGATG 1 cut(s) 785
BtsIMutI CAGTG 4 cut(s) 54, 106, 664, 1053
Cac8I GCNNGC 2 cut(s) 1243, 2254
CfoI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2314
Cfr13I GGNCC 2 cut(s) 635, 1383
ClaI ATCGAT 1 cut(s) 238
CseI GACGC 1 cut(s) 2157
CsiI ACCWGGT 1 cut(s) 2221
Csp6I GTAC 9 cut(s) 196, 360, 368, 736, 792, 851, 996, 1372, 1585
CspCI CAANNNNNGTGG 2 cut(s) 1661, 1696
CviAII CATG 8 cut(s) 519, 581, 639, 733, 810, 1594, 1879, 2164
CviQI GTAC 9 cut(s) 196, 360, 368, 736, 792, 851, 996, 1372, 1585
DdeI CTNAG 8 cut(s) 26, 345, 591, 650, 674, 1013, 1727, 1851
DpnI GATC 7 cut(s) 9, 870, 1212, 1629, 1746, 1833, 2091
DpnII GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
DraI TTTAAA 1 cut(s) 777
DrdI GACNNNNNNGTC 2 cut(s) 982, 1043
DseDI GACNNNNNNGTC 2 cut(s) 982, 1043
EaeI YGGCCR 2 cut(s) 1243, 2156
Eam1104I CTCTTC 1 cut(s) 1448
EarI CTCTTC 1 cut(s) 1448
Eco130I CCWWGG 3 cut(s) 117, 638, 1477
Eco147I AGGCCT 2 cut(s) 679, 2050
Eco31I GGTCTC 1 cut(s) 1703
Eco32I GATATC 1 cut(s) 1222
Eco47I GGWCC 1 cut(s) 1383
Eco57I CTGAAG 3 cut(s) 139, 1257, 1508
Eco72I CACGTG 1 cut(s) 1369
Eco81I CCTNAGG 1 cut(s) 591
EcoNI CCTNNNNNAGG 2 cut(s) 543, 2262
EcoRI GAATTC 1 cut(s) 551
EcoRII CCWGG 6 cut(s) 160, 544, 1020, 1608, 1721, 2221
EcoRV GATATC 1 cut(s) 1222
EcoT14I CCWWGG 3 cut(s) 117, 638, 1477
EcoT22I ATGCAT 1 cut(s) 586
ErhI CCWWGG 3 cut(s) 117, 638, 1477
FaeI CATG 8 cut(s) 522, 584, 642, 736, 813, 1597, 1882, 2167
FalI AAGNNNNNCTT 2 cut(s) 2109, 2141
FaqI GGGAC 3 cut(s) 497, 1435, 1879
FatI CATG 8 cut(s) 518, 580, 638, 732, 809, 1593, 1878, 2163
FauNDI CATATG 1 cut(s) 1870
FbaI TGATCA 2 cut(s) 868, 1627
FblI GTMKAC 1 cut(s) 934
Fnu4HI GCNGC 5 cut(s) 112, 1018, 1192, 1332, 2110
Fsp4HI GCNGC 5 cut(s) 112, 1018, 1192, 1332, 2110
FspBI CTAG 6 cut(s) 855, 1217, 1427, 1473, 1812, 1952
GlaI GCGC 6 cut(s) 115, 664, 797, 1001, 1195, 2313
GluI GCNGC 5 cut(s) 112, 1018, 1192, 1332, 2110
GsaI CCCAGC 1 cut(s) 1905
GsuI CTGGAG 1 cut(s) 1860
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 7 cut(s) 636, 648, 679, 1245, 1660, 2050, 2158
HapII CCGG 3 cut(s) 264, 1235, 1824
HgaI GACGC 1 cut(s) 2157
HhaI GCGC 6 cut(s) 116, 665, 798, 1002, 1196, 2314
Hin1I GRCGYC 1 cut(s) 2168
Hin1II CATG 8 cut(s) 522, 584, 642, 736, 813, 1597, 1882, 2167
Hin6I GCGC 6 cut(s) 114, 663, 796, 1000, 1194, 2312
HinP1I GCGC 6 cut(s) 114, 663, 796, 1000, 1194, 2312
HincII GTYRAC 1 cut(s) 73
HindII GTYRAC 1 cut(s) 73
HindIII AAGCTT 1 cut(s) 433
HpaII CCGG 3 cut(s) 264, 1235, 1824
HphI GGTGA 3 cut(s) 17, 1102, 1220
Hpy166II GTNNAC 7 cut(s) 54, 73, 333, 727, 935, 1093, 1372
Hpy188III TCNNGA 7 cut(s) 384, 1235, 1344, 1864, 1994, 2147, 2234
Hpy8I GTNNAC 7 cut(s) 54, 73, 333, 727, 935, 1093, 1372
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 4 cut(s) 456, 1962, 2036, 2040
HpyCH4III ACNGT 3 cut(s) 220, 1142, 1650
HpyCH4IV ACGT 3 cut(s) 1368, 1666, 2245
HpyF10VI GCNNNNNNNGC 2 cut(s) 350, 1473
HpyF3I CTNAG 8 cut(s) 26, 345, 591, 650, 674, 1013, 1727, 1851
HpySE526I ACGT 3 cut(s) 1368, 1666, 2245
Hsp92I GRCGYC 1 cut(s) 2168
Hsp92II CATG 8 cut(s) 522, 584, 642, 736, 813, 1597, 1882, 2167
HspAI GCGC 6 cut(s) 114, 663, 796, 1000, 1194, 2312
Kpn2I TCCGGA 1 cut(s) 1234
KpnI GGTACC 1 cut(s) 854
Ksp22I TGATCA 2 cut(s) 868, 1627
Kzo9I GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
LmnI GCTCC 1 cut(s) 887
Lsp1109I GCAGC 5 cut(s) 123, 1004, 1178, 1318, 2096
LweI GCATC 4 cut(s) 87, 230, 1228, 2121
MabI ACCWGGT 1 cut(s) 2221
MaeI CTAG 6 cut(s) 855, 1217, 1427, 1473, 1812, 1952
MaeII ACGT 3 cut(s) 1368, 1666, 2245
MaeIII GTNAC 8 cut(s) 164, 179, 406, 459, 907, 954, 984, 2103
MalI GATC 7 cut(s) 9, 870, 1212, 1629, 1746, 1833, 2091
MboI GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
MboII GAAGA 7 cut(s) 145, 484, 545, 1295, 1312, 1465, 1652
MflI RGATCY 1 cut(s) 1744
MlsI TGGCCA 1 cut(s) 1245
MluNI TGGCCA 1 cut(s) 1245
MlyI GAGTC 1 cut(s) 251
MmeI TCCRAC 1 cut(s) 1623
Mox20I TGGCCA 1 cut(s) 1245
Mph1103I ATGCAT 1 cut(s) 586
MroI TCCGGA 1 cut(s) 1234
MscI TGGCCA 1 cut(s) 1245
MseI TTAA 9 cut(s) 213, 501, 776, 1355, 1391, 1403, 1485, 1820, 2075
MslI CAYNNNNRTG 2 cut(s) 991, 1262
Msp20I TGGCCA 1 cut(s) 1245
MspCI CTTAAG 1 cut(s) 500
MspI CCGG 3 cut(s) 264, 1235, 1824
MspR9I CCNGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
Mva1269I GAATGC 1 cut(s) 1121
MvaI CCWGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
MvnI CGCG 3 cut(s) 796, 1000, 2314
MwoI GCNNNNNNNGC 2 cut(s) 350, 1473
NcoI CCATGG 1 cut(s) 638
NdeI CATATG 1 cut(s) 1870
NdeII GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
NlaIII CATG 8 cut(s) 522, 584, 642, 736, 813, 1597, 1882, 2167
NlaIV GGNNCC 3 cut(s) 784, 852, 1884
NmuCI GTSAC 3 cut(s) 406, 954, 984
NsiI ATGCAT 1 cut(s) 586
NspI RCATGY 2 cut(s) 736, 1597
NspV TTCGAA 1 cut(s) 1261
PceI AGGCCT 2 cut(s) 679, 2050
PciI ACATGT 2 cut(s) 732, 1593
PctI GAATGC 1 cut(s) 1121
PfeI GAWTC 9 cut(s) 380, 575, 654, 942, 1231, 1546, 1718, 1783, 2066
PflMI CCANNNNNTGG 1 cut(s) 644
PkrI GCNGC 5 cut(s) 113, 1019, 1193, 1333, 2111
PleI GAGTC 1 cut(s) 251
PmaCI CACGTG 1 cut(s) 1369
PmlI CACGTG 1 cut(s) 1369
PpsI GAGTC 1 cut(s) 251
Ppu21I YACGTR 1 cut(s) 1369
PscI ACATGT 2 cut(s) 732, 1593
PshAI GACNNNNGTC 1 cut(s) 540
PshBI ATTAAT 1 cut(s) 1485
PsiI TTATAA 3 cut(s) 1508, 1961, 2180
Psp1406I AACGTT 1 cut(s) 1666
Psp6I CCWGG 6 cut(s) 160, 544, 1020, 1608, 1721, 2221
PspCI CACGTG 1 cut(s) 1369
PspFI CCCAGC 1 cut(s) 1901
PspGI CCWGG 6 cut(s) 160, 544, 1020, 1608, 1721, 2221
PspN4I GGNNCC 3 cut(s) 784, 852, 1884
PspPI GGNCC 2 cut(s) 635, 1383
PsrI GAACNNNNNNTAC 2 cut(s) 775, 807
PstI CTGCAG 1 cut(s) 1336
PsuI RGATCY 1 cut(s) 1744
RsaI GTAC 9 cut(s) 197, 361, 369, 737, 793, 852, 997, 1373, 1586
RsaNI GTAC 9 cut(s) 196, 360, 368, 736, 792, 851, 996, 1372, 1585
RseI CAYNNNNRTG 2 cut(s) 991, 1262
SaqAI TTAA 9 cut(s) 213, 501, 776, 1355, 1391, 1403, 1485, 1820, 2075
SatI GCNGC 5 cut(s) 112, 1018, 1192, 1332, 2110
Sau3AI GATC 7 cut(s) 7, 868, 1210, 1627, 1744, 1831, 2089
Sau96I GGNCC 2 cut(s) 635, 1383
SchI GAGTC 1 cut(s) 251
ScrFI CCNGG 6 cut(s) 162, 546, 1022, 1610, 1723, 2223
SexAI ACCWGGT 1 cut(s) 2221
SfaNI GCATC 4 cut(s) 87, 230, 1228, 2121
SfcI CTRYAG 1 cut(s) 1332
SfuI TTCGAA 1 cut(s) 1261
SinI GGWCC 1 cut(s) 1383
SmiMI CAYNNNNRTG 2 cut(s) 991, 1262
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
SseBI AGGCCT 2 cut(s) 679, 2050
SsiI CCGC 1 cut(s) 2314
SspI AATATT 1 cut(s) 1818
SspMI CTAG 6 cut(s) 855, 1217, 1427, 1473, 1812, 1952
StuI AGGCCT 2 cut(s) 679, 2050
StyD4I CCNGG 6 cut(s) 160, 544, 1020, 1608, 1721, 2221
StyI CCWWGG 3 cut(s) 117, 638, 1477
TaaI ACNGT 3 cut(s) 220, 1142, 1650
TaiI ACGT 3 cut(s) 1371, 1669, 2248
TaqI TCGA 4 cut(s) 238, 438, 699, 1261
TatI WGTACW 2 cut(s) 359, 735
TfiI GAWTC 9 cut(s) 380, 575, 654, 942, 1231, 1546, 1718, 1783, 2066
Tru1I TTAA 9 cut(s) 213, 501, 776, 1355, 1391, 1403, 1485, 1820, 2075
Tru9I TTAA 9 cut(s) 213, 501, 776, 1355, 1391, 1403, 1485, 1820, 2075
TscAI CASTG 4 cut(s) 61, 106, 664, 1060
TseFI GTSAC 3 cut(s) 406, 954, 984
TseI GCWGC 5 cut(s) 111, 1017, 1191, 1331, 2109
Tsp45I GTSAC 3 cut(s) 406, 954, 984
TspGWI ACGGA 2 cut(s) 75, 1617
TspRI CASTG 4 cut(s) 61, 106, 664, 1060
Van91I CCANNNNNTGG 1 cut(s) 644
Vha464I CTTAAG 1 cut(s) 500
VpaK11BI GGWCC 1 cut(s) 1383
VspI ATTAAT 1 cut(s) 1485
XagI CCTNNNNNAGG 2 cut(s) 543, 2262
XceI RCATGY 2 cut(s) 736, 1597
XcmI CCANNNNNNNNNTGG 4 cut(s) 1606, 1679, 2012, 2302
XmiI GTMKAC 1 cut(s) 934
XspI CTAG 6 cut(s) 855, 1217, 1427, 1473, 1812, 1952
Zsp2I ATGCAT 1 cut(s) 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.