Rh5AG250100

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000207
Physical Location & Seq
Forward (+)
31716348 .. 31720479
4132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG250100.1

Sequence Viewer

Length: 2082 bp
ATGAAGAACCTCTGCTTCATTCTTCTCTGCATCTGTTTCAGCAAACTTTCATCTGCAGCTGATACCCTTTCTTCATCTCAGAACATCACTGATGGCAACTCCTTGGTTTCCCCAGGTGGAGTATTTCAACTGGGTTTCTTCAGCCCAGGCAGTTCCAAATCCCGCTACTTGGGGATTTGGTACAAGAACATCTCAGTCCAAACCGTCGTTTGGGTTGCGAATCGAGGCACCCCGATCAACGACTCCTCAGGCCATTTGATGATCAACACCACCACAGGGGCTCTAGTTCTTCTCAACAACAACAAGACCGTTTTTTGGTCATCAAATTCGACGAAACAAACCCAGAATATTAGTCCTGTCGTTCAGTTACTAGACAATGGCAATCTTATTCTCAGAGACGAGAAAGAAGGAGCAAACTCCGAAAGCTATCTGTGGCAAAGCTTCGACTATCCGTCGGATACTTTGTTACCGGGGATGAAGCTGGGATGGGACTTGAGAACCGGGCTGAACCGGAGACTGACGGCGTGGAAGAGTCCAGATGACCCTTCTCCTGGAGACTTCATATGGGAGATGCAGCTGCATAACTATCCTGAGCCAGCTATGTTCAGAGCGGGCAAAGAGTTTTTGAGGAGTGGTCCGTGGAATGGTGTTTTATTCAGTGGAAAACCGGCAAAGGCGCTACCGGCATTGAACTTCAGCTTCTTCATGGATGAGGATGAGGTTTACACAACAATTGGAATGGTGGACAAGTCAGCATTAGGGAGGATGATGCTGAATTTAACTGCAGATTACTACCGCCAGTCGTGGATTTGGTCTGAAGCAGACCGAAATTGGACACTCTATGCAGCATTTCCTAGGGATCCTTGTGACAGTTATGCCAAGTGTGGAGGAAATGGAAACTGTATGCTTAGTGAATCCCCGATGTGTCAATGTTTAGACAGGTTCAGGCCTAGATCAATGGAGAAGTGGAGCTTAAACAATTTTTCGCTCGGGTGTGAGCGAAAGACGCCATTGAGGTGCAAGAATGATGGATTTGTGACTTATACTGGGTTAAAATTGCCCGATACAACGCATACTTGGATCGATAAAGCTATGAATCTCAAGGAGTGCAGGGCCAAATGCTTGTCTAATTGTTCTTGTTCCGCGTACACAAACTTGGATGTCAGAGGAGGAGGTAGTGGTTGTGCAATCTGGTTTGGTGATCTTGTAGACTTGAAGCAGATTCCGGGTGGTGACCAGGATATTTACATTAAGATCTCTGCTGCAGAACTAGGAGGGAAAGATAAGAAGTGGAAGATAGGAGTGATAGTTGCATCTGCCGTTGCTGTAATTCTTGCGATGTTCTTATTTGGCTATTGTTACATTCTCAGACTCAGACACAGGAAAAGTTTCAAGGGTACTCAAAACAACATTGAAGAGCAGAAGGATGAAGACCTGGAGCTGCCATTGTTTGACTTGTCAACAATAGAGACTGCTACCAATAAATTCTCAATCAATAATAAACTTGGAGAAGGTGGTTTTGGACCTGTGTACAAGGTAATATGTAATCTGGTAACGGAAGAATCAAACAAGTTTAGCATCTGTTTTGAGAAAATAACAACTAATCTTCATGCAAATGTGAATAATCTTCAGGGTACACTAATAGATGGAAAAGAAATTGCAGTGAAGCGGCTCTCAAGAAGTTCTGGACAAGGAATGAAAGAGTTCAAAAATGAAGTAATACTGATTGCAAAACTTCAGCACCGCAATCTTGTAAAGCTTCTTGGTTGTTGTATTCAGGGAGAGGAGAAATTGCTGATCTATGAATACATGCCCAACAAAAGTTTAGATTCCTTCATTTTTGATGAAATGCGAAGAAAATTGTTAGATTGGCCTAAGCGCTTCCGTATTATTTGCGGAATTGCTAGGGGGCTTCTCTATCTTCATCAGGACTCCAGGCTGAGGATTATACACAGAGATCTAAAAGCGAGCAATGTCTTGCTTGATCGTGAGATGAACCCCAAAATCTCAGATTTTGGTCTTGCTAGAACTTTTGGTGGCGACCAAACTGAAGGAAACACAAACAGAGTAGTTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

693

Amino Acids

77.87

Weight (kDa)

8.69

Isoelectric Point (pI)

38.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 68 - 177 1.2e-37 D-mannose binding lectin
S_locus_glycop PF00954 210 - 318 1.2e-21 S-locus glycoprotein domain
PAN_2 PF08276 340 - 405 1.8e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 500 - 683 6.8e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 549 - 693 3.4e-25 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 227
AccBSI CCGCTC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 1209
AccII CGCG 1 cut(s) 1145
AciI CCGC 7 cut(s) 163, 611, 796, 1143, 1669, 1744, 1896
AclWI GGATC 3 cut(s) 854, 867, 1088
AcsI RAATTY 3 cut(s) 325, 775, 1484
AcuI CTGAAG 6 cut(s) 124, 679, 837, 1613, 1721, 2070
AcyI GRCGYC 1 cut(s) 1007
AfaI GTAC 5 cut(s) 182, 1148, 1399, 1532, 1636
AfeI AGCGCT 1 cut(s) 1880
AfiI CCNNNNNNNGG 7 cut(s) 169, 210, 276, 315, 551, 644, 1941
AgsI TTSAA 6 cut(s) 128, 691, 1216, 1393, 1415, 1708
AhdI GACNNNNNGTC 1 cut(s) 451
AjnI CCWGG 6 cut(s) 112, 145, 550, 1236, 1434, 1934
AjuI GAANNNNNNNTTGG 2 cut(s) 1503, 1535
Alw26I GTCTC 4 cut(s) 390, 508, 549, 1463
AlwI GGATC 3 cut(s) 854, 867, 1088
Ama87I CYCGRG 1 cut(s) 989
Aor51HI AGCGCT 1 cut(s) 1880
AoxI GGCC 4 cut(s) 250, 947, 1113, 1871
ApeKI GCWGC 6 cut(s) 56, 574, 577, 845, 1262, 1441
ApoI RAATTY 3 cut(s) 325, 775, 1484
Asp700I GAANNNNTTC 2 cut(s) 1388, 1703
AspA2I CCTAGG 1 cut(s) 854
AspLEI GCGC 2 cut(s) 679, 1881
AspS9I GGNCC 3 cut(s) 635, 1113, 1523
AsuC2I CCSGG 3 cut(s) 471, 502, 1227
AsuHPI GGTGA 2 cut(s) 1211, 1244
AvaI CYCGRG 1 cut(s) 989
AvaII GGWCC 2 cut(s) 635, 1523
AvrII CCTAGG 1 cut(s) 854
AxyI CCTNAGG 1 cut(s) 247
BamHI GGATCC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 283
BbsI GAAGAC 1 cut(s) 1437
BbvCI CCTCAGC 1 cut(s) 1940
BbvI GCAGC 6 cut(s) 68, 564, 586, 857, 1249, 1428
BccI CCATC 4 cut(s) 86, 480, 1022, 1640
BceAI ACGGC 2 cut(s) 537, 1304
BciT130I CCWGG 6 cut(s) 114, 147, 552, 1238, 1436, 1936
BciVI GTATCC 1 cut(s) 451
BclI TGATCA 1 cut(s) 261
BcnI CCSGG 3 cut(s) 471, 502, 1227
BcoDI GTCTC 4 cut(s) 390, 508, 549, 1463
BfaI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1905, 2025
BfmI CTRYAG 3 cut(s) 54, 783, 1263
BfoI RGCGCY 2 cut(s) 680, 1882
BfuI GTATCC 1 cut(s) 451
BglII AGATCT 2 cut(s) 1254, 1957
BisI GCNGC 7 cut(s) 57, 575, 578, 846, 1263, 1442, 1670
BlnI CCTAGG 1 cut(s) 854
BlsI GCNGC 7 cut(s) 58, 576, 579, 847, 1264, 1443, 1671
Bme1390I CCNGG 9 cut(s) 114, 147, 471, 502, 552, 1227, 1238, 1436, 1936
Bme18I GGWCC 2 cut(s) 635, 1523
BmeRI GACNNNNNGTC 1 cut(s) 451
BmeT110I CYCGRG 1 cut(s) 989
BmgT120I GGNCC 3 cut(s) 635, 1113, 1523
BmiI GGNNCC 2 cut(s) 229, 861
BmrFI CCNGG 9 cut(s) 114, 147, 471, 502, 552, 1227, 1238, 1436, 1936
BmrI ACTGGG 2 cut(s) 140, 1056
BmsI GCATC 5 cut(s) 39, 561, 759, 1322, 1587
BmuI ACTGGG 2 cut(s) 140, 1056
BpiI GAAGAC 1 cut(s) 1437
BpmI CTGGAG 3 cut(s) 573, 1457, 1918
Bpu10I CCTNAGC 3 cut(s) 591, 1875, 1940
BpuEI CTTGAG 3 cut(s) 514, 1085, 1660
BpuMI CCSGG 3 cut(s) 471, 502, 1227
Bsa29I ATCGAT 1 cut(s) 1083
BsaHI GRCGYC 1 cut(s) 1007
BsaJI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BsaWI WCCGGW 1 cut(s) 510
BsaXI ACNNNNNCTCC 2 cut(s) 1293, 1323
Bsc4I CCNNNNNNNGG 7 cut(s) 169, 210, 276, 315, 551, 644, 1941
Bse118I RCCGGY 2 cut(s) 667, 682
Bse1I ACTGG 3 cut(s) 135, 799, 1051
Bse21I CCTNAGG 1 cut(s) 247
Bse3DI GCAATG 1 cut(s) 1978
BseBI CCWGG 6 cut(s) 114, 147, 552, 1238, 1436, 1936
BseCI ATCGAT 1 cut(s) 1083
BseDI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BseGI GGATG 7 cut(s) 480, 491, 715, 721, 771, 1165, 1432
BseLI CCNNNNNNNGG 7 cut(s) 169, 210, 276, 315, 551, 644, 1941
BseMI GCAATG 1 cut(s) 1978
BseMII CTCAG 9 cut(s) 92, 207, 261, 406, 582, 1381, 1387, 1931, 2022
BseNI ACTGG 3 cut(s) 135, 799, 1051
BseRI GAGGAG 5 cut(s) 235, 643, 1182, 1185, 1799
BseXI GCAGC 6 cut(s) 68, 564, 586, 857, 1249, 1428
BseYI CCCAGC 1 cut(s) 481
BsgI GTGCAG 1 cut(s) 1129
Bsh1236I CGCG 1 cut(s) 1145
BshFI GGCC 4 cut(s) 252, 949, 1115, 1873
BshNI GGYRCC 1 cut(s) 227
BshVI ATCGAT 1 cut(s) 1083
BsiHKCI CYCGRG 1 cut(s) 989
BsiSI CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
BslFI GGGAC 1 cut(s) 503
BslI CCNNNNNNNGG 7 cut(s) 169, 210, 276, 315, 551, 644, 1941
BsmAI GTCTC 4 cut(s) 390, 508, 549, 1463
BsmBI CGTCTC 1 cut(s) 390
BsmFI GGGAC 1 cut(s) 503
BsnI GGCC 4 cut(s) 252, 949, 1115, 1873
BsoBI CYCGRG 1 cut(s) 989
Bsp1286I GDGCHC 1 cut(s) 283
Bsp1407I TGTACA 1 cut(s) 1530
BspACI CCGC 7 cut(s) 163, 611, 796, 1143, 1669, 1744, 1896
BspANI GGCC 4 cut(s) 252, 949, 1115, 1873
BspCNI CTCAG 9 cut(s) 91, 206, 260, 405, 583, 1380, 1386, 1932, 2021
BspDI ATCGAT 1 cut(s) 1083
BspFNI CGCG 1 cut(s) 1145
BspLI GGNNCC 2 cut(s) 229, 861
BspMAI CTGCAG 3 cut(s) 58, 787, 1267
BspPI GGATC 3 cut(s) 854, 867, 1088
BspQI GCTCTTC 1 cut(s) 1410
BspT107I GGYRCC 1 cut(s) 227
BsrBI CCGCTC 1 cut(s) 611
BsrDI GCAATG 1 cut(s) 1978
BsrFI RCCGGY 2 cut(s) 667, 682
BsrGI TGTACA 1 cut(s) 1530
BsrI ACTGG 3 cut(s) 135, 799, 1051
BssAI RCCGGY 2 cut(s) 667, 682
BssECI CCNNGG 6 cut(s) 102, 112, 145, 470, 638, 854
BssNI GRCGYC 1 cut(s) 1007
BssT1I CCWWGG 2 cut(s) 102, 854
Bst2UI CCWGG 6 cut(s) 114, 147, 552, 1238, 1436, 1936
Bst4CI ACNGT 4 cut(s) 205, 310, 872, 902
Bst6I CTCTTC 2 cut(s) 524, 1410
BstACI GRCGYC 1 cut(s) 1007
BstAUI TGTACA 1 cut(s) 1530
BstC8I GCNNGC 3 cut(s) 597, 613, 1969
BstDSI CCRYGG 1 cut(s) 638
BstEII GGTNACC 1 cut(s) 1232
BstF5I GGATG 7 cut(s) 480, 491, 715, 721, 771, 1165, 1432
BstFNI CGCG 1 cut(s) 1145
BstH2I RGCGCY 2 cut(s) 680, 1882
BstHHI GCGC 2 cut(s) 679, 1881
BstMAI GTCTC 4 cut(s) 390, 508, 549, 1463
BstMWI GCNNNNNNNGC 2 cut(s) 683, 1006
BstNI CCWGG 6 cut(s) 114, 147, 552, 1238, 1436, 1936
BstNSI RCATGY 1 cut(s) 1813
BstPI GGTNACC 1 cut(s) 1232
BstSCI CCNGG 9 cut(s) 112, 145, 469, 500, 550, 1225, 1236, 1434, 1934
BstSFI CTRYAG 3 cut(s) 54, 783, 1263
BstUI CGCG 1 cut(s) 1145
BstV1I GCAGC 6 cut(s) 68, 564, 586, 857, 1249, 1428
BstV2I GAAGAC 1 cut(s) 1437
BstX2I RGATCY 3 cut(s) 859, 1254, 1957
BstYI RGATCY 3 cut(s) 859, 1254, 1957
Bsu15I ATCGAT 1 cut(s) 1083
Bsu36I CCTNAGG 1 cut(s) 247
BsuI GTATCC 1 cut(s) 451
BsuRI GGCC 4 cut(s) 252, 949, 1115, 1873
BsuTUI ATCGAT 1 cut(s) 1083
BtgI CCRYGG 1 cut(s) 638
BtgZI GCGATG 1 cut(s) 1352
BtsCI GGATG 7 cut(s) 480, 491, 715, 721, 771, 1165, 1432
BtsI GCAGTG 1 cut(s) 1668
BtsIMutI CAGTG 3 cut(s) 87, 664, 1668
Cac8I GCNNGC 3 cut(s) 597, 613, 1969
CfoI GCGC 2 cut(s) 679, 1881
Cfr10I RCCGGY 2 cut(s) 667, 682
Cfr13I GGNCC 3 cut(s) 635, 1113, 1523
ClaI ATCGAT 1 cut(s) 1083
CseI GACGC 1 cut(s) 1015
Csp6I GTAC 5 cut(s) 181, 1147, 1398, 1531, 1635
CviAII CATG 3 cut(s) 706, 1610, 1810
CviQI GTAC 5 cut(s) 181, 1147, 1398, 1531, 1635
DriI GACNNNNNGTC 1 cut(s) 451
Eam1104I CTCTTC 2 cut(s) 524, 1410
Eam1105I GACNNNNNGTC 1 cut(s) 451
EarI CTCTTC 2 cut(s) 524, 1410
Eco130I CCWWGG 2 cut(s) 102, 854
Eco147I AGGCCT 1 cut(s) 949
Eco24I GRGCYC 1 cut(s) 283
Eco47I GGWCC 2 cut(s) 635, 1523
Eco47III AGCGCT 1 cut(s) 1880
Eco57I CTGAAG 6 cut(s) 124, 679, 837, 1613, 1721, 2070
Eco81I CCTNAGG 1 cut(s) 247
Eco88I CYCGRG 1 cut(s) 989
Eco91I GGTNACC 1 cut(s) 1232
EcoO65I GGTNACC 1 cut(s) 1232
EcoRII CCWGG 6 cut(s) 112, 145, 550, 1236, 1434, 1934
EcoT14I CCWWGG 2 cut(s) 102, 854
EcoT38I GRGCYC 1 cut(s) 283
ErhI CCWWGG 2 cut(s) 102, 854
Esp3I CGTCTC 1 cut(s) 390
FaeI CATG 3 cut(s) 709, 1613, 1813
FalI AAGNNNNNCTT 2 cut(s) 956, 988
FaqI GGGAC 1 cut(s) 503
FatI CATG 3 cut(s) 705, 1609, 1809
FauI CCCGC 2 cut(s) 170, 604
FauNDI CATATG 1 cut(s) 563
FbaI TGATCA 1 cut(s) 261
FblI GTMKAC 1 cut(s) 1209
Fnu4HI GCNGC 7 cut(s) 57, 575, 578, 846, 1263, 1442, 1670
FokI GGATG 7 cut(s) 487, 498, 722, 728, 778, 1172, 1439
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 7 cut(s) 57, 575, 578, 846, 1263, 1442, 1670
FspBI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1905, 2025
GlaI GCGC 2 cut(s) 678, 1880
GluI GCNGC 7 cut(s) 57, 575, 578, 846, 1263, 1442, 1670
GsaI CCCAGC 1 cut(s) 485
GsuI CTGGAG 3 cut(s) 573, 1457, 1918
HaeII RGCGCY 2 cut(s) 680, 1882
HaeIII GGCC 4 cut(s) 252, 949, 1115, 1873
HapII CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
HgaI GACGC 1 cut(s) 1015
HhaI GCGC 2 cut(s) 679, 1881
Hin1I GRCGYC 1 cut(s) 1007
Hin1II CATG 3 cut(s) 709, 1613, 1813
Hin6I GCGC 2 cut(s) 677, 1879
HinP1I GCGC 2 cut(s) 677, 1879
HincII GTYRAC 1 cut(s) 1461
HindII GTYRAC 1 cut(s) 1461
HindIII AAGCTT 2 cut(s) 439, 1757
HpaII CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
HphI GGTGA 2 cut(s) 1211, 1244
Hpy166II GTNNAC 7 cut(s) 724, 745, 1149, 1210, 1461, 1531, 1637
Hpy188III TCNNGA 6 cut(s) 536, 590, 1677, 1686, 1928, 1988
Hpy8I GTNNAC 7 cut(s) 724, 745, 1149, 1210, 1461, 1531, 1637
Hpy99I CGWCG 3 cut(s) 209, 334, 457
HpyAV CCTTC 6 cut(s) 401, 555, 1417, 1505, 1843, 2045
HpyCH4III ACNGT 4 cut(s) 205, 310, 872, 902
HpyF10VI GCNNNNNNNGC 2 cut(s) 683, 1006
Hsp92I GRCGYC 1 cut(s) 1007
Hsp92II CATG 3 cut(s) 709, 1613, 1813
HspAI GCGC 2 cut(s) 677, 1879
Ksp22I TGATCA 1 cut(s) 261
LguI GCTCTTC 1 cut(s) 1410
LmnI GCTCC 3 cut(s) 410, 969, 1438
Lsp1109I GCAGC 6 cut(s) 68, 564, 586, 857, 1249, 1428
LweI GCATC 5 cut(s) 39, 561, 759, 1322, 1587
MaeI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1905, 2025
MaeIII GTNAC 7 cut(s) 366, 465, 866, 1036, 1232, 1358, 1552
MbiI CCGCTC 1 cut(s) 611
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 3 cut(s) 859, 1254, 1957
MhlI GDGCHC 1 cut(s) 283
MlyI GAGTC 4 cut(s) 236, 541, 1365, 1925
MmeI TCCRAC 2 cut(s) 435, 2053
MroXI GAANNNNTTC 2 cut(s) 1388, 1703
MseI TTAA 4 cut(s) 779, 974, 1052, 1251
MslI CAYNNNNRTG 2 cut(s) 1015, 1614
MspA1I CMGCKG 2 cut(s) 59, 577
MspI CCGG 6 cut(s) 470, 501, 511, 668, 683, 1226
MspR9I CCNGG 9 cut(s) 114, 147, 471, 502, 552, 1227, 1238, 1436, 1936
MunI CAATTG 1 cut(s) 732
MvaI CCWGG 6 cut(s) 114, 147, 552, 1238, 1436, 1936
MvnI CGCG 1 cut(s) 1145
MwoI GCNNNNNNNGC 2 cut(s) 683, 1006
NciI CCSGG 3 cut(s) 471, 502, 1227
NdeI CATATG 1 cut(s) 563
NlaIII CATG 3 cut(s) 709, 1613, 1813
NlaIV GGNNCC 2 cut(s) 229, 861
NmuCI GTSAC 3 cut(s) 866, 1036, 1232
NspI RCATGY 1 cut(s) 1813
PceI AGGCCT 1 cut(s) 949
PciSI GCTCTTC 1 cut(s) 1410
PdmI GAANNNNTTC 2 cut(s) 1388, 1703
PfeI GAWTC 6 cut(s) 220, 914, 1096, 1222, 1562, 1829
PfoI TCCNGGA 1 cut(s) 550
PkrI GCNGC 7 cut(s) 58, 576, 579, 847, 1264, 1443, 1671
PleI GAGTC 4 cut(s) 236, 540, 1365, 1925
PpsI GAGTC 4 cut(s) 236, 540, 1365, 1925
Psp6I CCWGG 6 cut(s) 112, 145, 550, 1236, 1434, 1934
PspEI GGTNACC 1 cut(s) 1232
PspFI CCCAGC 1 cut(s) 481
PspGI CCWGG 6 cut(s) 112, 145, 550, 1236, 1434, 1934
PspN4I GGNNCC 2 cut(s) 229, 861
PspPI GGNCC 3 cut(s) 635, 1113, 1523
PstI CTGCAG 3 cut(s) 58, 787, 1267
PsuI RGATCY 3 cut(s) 859, 1254, 1957
PvuII CAGCTG 2 cut(s) 59, 577
RsaI GTAC 5 cut(s) 182, 1148, 1399, 1532, 1636
RsaNI GTAC 5 cut(s) 181, 1147, 1398, 1531, 1635
RseI CAYNNNNRTG 2 cut(s) 1015, 1614
SapI GCTCTTC 1 cut(s) 1410
SaqAI TTAA 4 cut(s) 779, 974, 1052, 1251
SatI GCNGC 7 cut(s) 57, 575, 578, 846, 1263, 1442, 1670
Sau96I GGNCC 3 cut(s) 635, 1113, 1523
SchI GAGTC 4 cut(s) 236, 541, 1365, 1925
ScrFI CCNGG 9 cut(s) 114, 147, 471, 502, 552, 1227, 1238, 1436, 1936
SduI GDGCHC 1 cut(s) 283
SfaNI GCATC 5 cut(s) 39, 561, 759, 1322, 1587
SfcI CTRYAG 3 cut(s) 54, 783, 1263
SinI GGWCC 2 cut(s) 635, 1523
SmiMI CAYNNNNRTG 2 cut(s) 1015, 1614
SmlI CTYRAG 3 cut(s) 493, 1100, 1675
SmoI CTYRAG 3 cut(s) 493, 1100, 1675
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 7 cut(s) 163, 611, 796, 1143, 1669, 1744, 1896
SspI AATATT 1 cut(s) 349
SspMI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1905, 2025
StuI AGGCCT 1 cut(s) 949
StyD4I CCNGG 9 cut(s) 112, 145, 469, 500, 550, 1225, 1236, 1434, 1934
StyI CCWWGG 2 cut(s) 102, 854
TaaI ACNGT 4 cut(s) 205, 310, 872, 902
TaqI TCGA 4 cut(s) 223, 329, 444, 1083
TaqII GACCGA 1 cut(s) 840
TatI WGTACW 1 cut(s) 1530
TauI GCSGC 1 cut(s) 1672
TfiI GAWTC 6 cut(s) 220, 914, 1096, 1222, 1562, 1829
Tru1I TTAA 4 cut(s) 779, 974, 1052, 1251
Tru9I TTAA 4 cut(s) 779, 974, 1052, 1251
TscAI CASTG 3 cut(s) 94, 664, 1668
TseFI GTSAC 3 cut(s) 866, 1036, 1232
TseI GCWGC 6 cut(s) 56, 574, 577, 845, 1262, 1441
Tsp45I GTSAC 3 cut(s) 866, 1036, 1232
TspGWI ACGGA 4 cut(s) 441, 627, 1571, 1874
TspRI CASTG 3 cut(s) 94, 664, 1668
VpaK11BI GGWCC 2 cut(s) 635, 1523
XapI RAATTY 3 cut(s) 325, 775, 1484
XceI RCATGY 1 cut(s) 1813
XmaJI CCTAGG 1 cut(s) 854
XmiI GTMKAC 1 cut(s) 1209
XmnI GAANNNNTTC 2 cut(s) 1388, 1703
XspI CTAG 7 cut(s) 284, 371, 855, 951, 1271, 1905, 2025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.