Rh5AG249400

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
31550223 .. 31554018
3796 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG249400.1

Sequence Viewer

Length: 2493 bp
ATGCAACCAGTAGAGTCGGTAGCTAATGAAGAAAAATTAAATTCAATGGGTGATCTGTGTATTGTGGTGTTTAGTACCAGTTTGCTCTTTCTGTTGTTCACAGGTTCATTTGCAGTTGACAGCATCAGTCCCTCGCAGTCTATCAGTGATAATGACAGCGCCTTGGTTTCAAGTGATGGAACATTTATGTTGGGTTTCTTCAGTCCAGGTAACTCGAAACACCGTTACTTGGGAATTTGGTACAAAAACATCCCAGTTAGAACTGTTGTTTGGGTTGCAAATCGGTGCAACCCGATTGATGACTCATCCGGTGTGTTGATGATAAACAGCACAGGATATCTTGTGCTGTTGGGTCAGAATAAGAGTGTAGTTTGGTGGACAAGTTTAGCTAAGTATACCCAGAGTGTAATGGTACAGCTATTAGATTCTGGAAACTTGGTAGTAAGAGATCTGACAGATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAAGACAGGTCTTAAAAGGGGATTATCAGCATGGAACAATTCAGAAGACCCATGTCCAGGGGAATTCACTTATGGAATTGAAATGGAACCTCATGCATACCCTGAGGCATATTTTCGGAAAGGTGGCCTGAAATTTTATCGTTCTGGCCCATGGAATGGCCTAAGATTTAGTGGTGCACCAGAACTAAGGCCTAATCCAATTTATAGTTTCTATTTTGTGCATAATGATGATGAAGTTTACTACATGTACAAACTTCAAAACAAGTCTGTAATTTCAATCATGGTCTTAAATGGAACCACTAGCACACGCGATCGCCTTACATGGATTGGAGCCGAGCAAACTTGGAGGGCCTATGCATCAGTACCTAGAGATTTCTGTGATCAATATAACCTCTGTGGAGAAAATGCAAATTGTATCATCAGTAACAATCCAGTATGTGAATGTCTACAAGGATTCACGCCTAAGTCACCAGAGAAATGGAATTCGACAGACTGGTCACTTGGATGTATGCGCAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGATGGGTTTGTCAAGTTCAATAACTTGAAATTGCCGGATACTACACATTCTTGGCTGAACAAAAGTATGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGACATCAGAGCAGGAGGTTCTGGCTGCGGCATTTGGTTTGGTGATCTACTAGATATCAGAAAGTTTCCGGATGCTGGCCAGGATATATACATTCGAATGTCGGCTTCAGAGATAGATGATGGTAAAATGAAGACAGGAATTATAGTTGCTGTTGTGATAGGCACAGTTTTTTCAGGAATGCTCGTAGTTGGCTACTACGTCTACCGATGCAGGACCAAATTGAAAGAGACAGAAAAACGAGAAGAAAATCTGAAGAATGAAGGGGCAGAAAAGGAGGACCTGGAGCTCCCGCTCTTCAACATAAGCACAATAGCTAGTGCAACAGATAACTTTTCAGATGATATGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAGGGGGACACTAGAAGGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGCAGTTCTGGCCAAGGATTTGACGAGTTCATGAATGAAATTATAATGATTGCCAAACTTCAGCACCGAAATCTTGTAAAGATTCTTGGTTGTTGCGTGCAAGAAGAGGAGAAAATGCTGATGTACGAATACATGCCCAACGGAAGCCTGGACAACTTCATTTTTGATCAAACAAGGGCAGTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTTGGCTAGAATATTAACTGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTTGGGACATATGGCTACATGGCACCTGAATATGCTGCTGATGGGGTATTTTCTGTGAAATCTGATGTCTTTAGCTTCGGGGTATTGGTGCTGGAGATTATAAGTGGAAGGCGAAACAAGGGTTTTTATCATCCAGACACAAGCCATAATCTTATTGGAAATGCTTGGAGATCGTGGAATGAAGGAAGGCCTTTAGAATTGATTGATTCCTGGTTAGAGAGCTCATGTAATGTATCGGAAGTGTTACGTTGCATCCAAGTTGGTCTTTTGTGCTTGCAACATCATCCTGAGGATCGGCCAAGCATGGCGTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGGCTCAACCTAAACAACCTGGTTTCTTTCTGGAAAAGGAACATAAAGCAGGCCCTGATATAGGTAATGAATCATCAACCAATGAAATATCCATTTCGCTTTTGCAAGCTCGGTAA

Protein Analysis

830

Amino Acids

92.95

Weight (kDa)

5.58

Isoelectric Point (pI)

43.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 88 - 189 6.5e-35 D-mannose binding lectin
S_locus_glycop PF00954 224 - 334 2.5e-29 S-locus glycoprotein domain
PAN_2 PF08276 355 - 423 2.6e-22 PAN-like domain
Pkinase PF00069 516 - 783 2.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 519 - 784 6.6e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1682, 2135, 2354
AasI GACNNNNNNGTC 1 cut(s) 1027
Acc16I TGCGCA 1 cut(s) 1046
AccB1I GGYRCC 1 cut(s) 2056
AccB7I CCANNNNNTGG 1 cut(s) 689
AccBSI CCGCTC 1 cut(s) 1504
AccI GTMKAC 3 cut(s) 395, 979, 1413
AccII CGCG 1 cut(s) 843
AccIII TCCGGA 1 cut(s) 1279
AciI CCGC 2 cut(s) 1239, 1502
AclI AACGTT 1 cut(s) 1840
AclWI GGATC 1 cut(s) 2334
AcoI YGGCCR 3 cut(s) 1288, 1648, 2330
AcsI RAATTY 6 cut(s) 40, 234, 596, 665, 1015, 1965
AcuI CTGAAG 4 cut(s) 184, 1302, 1484, 1682
AcyI GRCGYC 1 cut(s) 2342
AfaI GTAC 7 cut(s) 76, 242, 414, 782, 897, 1763, 1821
AfiI CCNNNNNNNGG 6 cut(s) 229, 590, 689, 1286, 1902, 2438
AflIII ACRYGT 1 cut(s) 777
AjnI CCWGG 9 cut(s) 205, 589, 1065, 1290, 1491, 1785, 1895, 2243, 2395
AjuI GAANNNNNNNTTGG 4 cut(s) 253, 285, 1560, 1592
AloI GAACNNNNNNTCC 2 cut(s) 1172, 1204
Alw21I GWGCWC 3 cut(s) 712, 1500, 2258
Alw26I GTCTC 2 cut(s) 1433, 1877
Alw44I GTGCAC 1 cut(s) 708
AlwI GGATC 1 cut(s) 2334
AlwNI CAGNNNCTG 1 cut(s) 2432
Ama87I CYCGRG 1 cut(s) 1866
Aor13HI TCCGGA 1 cut(s) 1279
ApaLI GTGCAC 1 cut(s) 708
ApeKI GCWGC 3 cut(s) 1062, 1236, 2069
ApoI RAATTY 6 cut(s) 40, 234, 596, 665, 1015, 1965
AsiSI GCGATCGC 1 cut(s) 847
AspLEI GCGC 2 cut(s) 161, 1047
AspS9I GGNCC 6 cut(s) 680, 882, 1425, 1489, 1580, 2429
AsuHPI GGTGA 3 cut(s) 62, 993, 1265
AsuII TTCGAA 1 cut(s) 1306
AvaI CYCGRG 1 cut(s) 1866
AvaII GGWCC 3 cut(s) 1425, 1489, 1580
AxyI CCTNAGG 2 cut(s) 636, 2322
BaeGI GKGCMC 1 cut(s) 712
BalI TGGCCA 2 cut(s) 1290, 1650
BanI GGYRCC 1 cut(s) 2056
BanII GRGCYC 2 cut(s) 1500, 2258
BbsI GAAGAC 2 cut(s) 585, 1349
Bbv12I GWGCWC 3 cut(s) 712, 1500, 2258
BbvI GCAGC 3 cut(s) 1049, 1223, 2056
BccI CCATC 7 cut(s) 170, 452, 514, 519, 1076, 1325, 2069
BciT130I CCWGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
BciVI GTATCC 1 cut(s) 1111
BclI TGATCA 2 cut(s) 913, 1804
BcoDI GTCTC 2 cut(s) 1433, 1877
BfaI CTAG 6 cut(s) 834, 900, 1262, 1527, 1601, 1986
BfoI RGCGCY 1 cut(s) 162
BfuI GTATCC 1 cut(s) 1111
BglII AGATCT 2 cut(s) 448, 1918
BisI GCNGC 4 cut(s) 1063, 1237, 1240, 2070
BlsI GCNGC 4 cut(s) 1064, 1238, 1241, 2071
BmcAI AGTACT 1 cut(s) 1821
Bme1390I CCNGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
Bme18I GGWCC 3 cut(s) 1425, 1489, 1580
BmeT110I CYCGRG 1 cut(s) 1866
BmgT120I GGNCC 6 cut(s) 680, 882, 1425, 1489, 1580, 2429
BmiI GGNNCC 4 cut(s) 621, 829, 865, 2058
BmrFI CCNGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 5 cut(s) 132, 899, 1273, 1409, 2295
BmuI ACTGGG 1 cut(s) 248
BoxI GACNNNNGTC 1 cut(s) 585
BpiI GAAGAC 2 cut(s) 585, 1349
BpmI CTGGAG 4 cut(s) 1514, 2019, 2034, 2147
Bpu10I CCTNAGC 2 cut(s) 1058, 1901
Bpu14I TTCGAA 1 cut(s) 1306
BsaHI GRCGYC 1 cut(s) 2342
BsaI GGTCTC 1 cut(s) 1877
BsaJI CCNNGG 4 cut(s) 162, 590, 683, 1651
BsaWI WCCGGW 2 cut(s) 308, 1279
Bsc4I CCNNNNNNNGG 6 cut(s) 229, 590, 689, 1286, 1902, 2438
Bse1I ACTGG 7 cut(s) 8, 78, 254, 965, 1031, 2002, 2017
Bse21I CCTNAGG 2 cut(s) 636, 2322
BseAI TCCGGA 1 cut(s) 1279
BseBI CCWGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
BseDI CCNNGG 4 cut(s) 162, 590, 683, 1651
BseGI GGATG 8 cut(s) 249, 305, 530, 1043, 1288, 2164, 2286, 2317
BseLI CCNNNNNNNGG 6 cut(s) 229, 590, 689, 1286, 1902, 2438
BseMII CTCAG 2 cut(s) 627, 2313
BseNI ACTGG 7 cut(s) 8, 78, 254, 965, 1031, 2002, 2017
BseRI GAGGAG 3 cut(s) 1760, 1865, 2016
BseSI GKGCMC 1 cut(s) 712
BseXI GCAGC 3 cut(s) 1049, 1223, 2056
Bsh1236I CGCG 1 cut(s) 843
Bsh1285I CGRYCG 1 cut(s) 847
BshNI GGYRCC 1 cut(s) 2056
BsiEI CGRYCG 1 cut(s) 847
BsiHKAI GWGCWC 3 cut(s) 712, 1500, 2258
BsiHKCI CYCGRG 1 cut(s) 1866
BsiSI CCGG 3 cut(s) 309, 1115, 1280
BslFI GGGAC 4 cut(s) 114, 542, 1609, 2053
BslI CCNNNNNNNGG 6 cut(s) 229, 590, 689, 1286, 1902, 2438
BsmAI GTCTC 2 cut(s) 1433, 1877
BsmFI GGGAC 4 cut(s) 114, 542, 1609, 2053
BsmI GAATGC 2 cut(s) 1166, 1395
Bso31I GGTCTC 1 cut(s) 1877
BsoBI CYCGRG 1 cut(s) 1866
Bsp119I TTCGAA 1 cut(s) 1306
Bsp1286I GDGCHC 3 cut(s) 712, 1500, 2258
Bsp13I TCCGGA 1 cut(s) 1279
Bsp1407I TGTACA 1 cut(s) 780
Bsp19I CCATGG 1 cut(s) 683
BspACI CCGC 2 cut(s) 1239, 1502
BspCNI CTCAG 2 cut(s) 628, 2314
BspEI TCCGGA 1 cut(s) 1279
BspFNI CGCG 1 cut(s) 843
BspHI TCATGA 1 cut(s) 1668
BspLI GGNNCC 4 cut(s) 621, 829, 865, 2058
BspPI GGATC 1 cut(s) 2334
BspQI GCTCTTC 1 cut(s) 1511
BspT104I TTCGAA 1 cut(s) 1306
BspT107I GGYRCC 1 cut(s) 2056
BspTNI GGTCTC 1 cut(s) 1877
BsrBI CCGCTC 1 cut(s) 1504
BsrGI TGTACA 1 cut(s) 780
BsrI ACTGG 7 cut(s) 8, 78, 254, 965, 1031, 2002, 2017
BssECI CCNNGG 4 cut(s) 162, 590, 683, 1651
BssNAI GTATAC 1 cut(s) 396
BssNI GRCGYC 1 cut(s) 2342
BssT1I CCWWGG 3 cut(s) 162, 683, 1651
Bst1107I GTATAC 1 cut(s) 396
Bst2UI CCWGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
Bst4CI ACNGT 5 cut(s) 224, 265, 1187, 1378, 1824
Bst6I CTCTTC 3 cut(s) 1511, 1622, 1737
BstACI GRCGYC 1 cut(s) 2342
BstAUI TGTACA 1 cut(s) 780
BstBI TTCGAA 1 cut(s) 1306
BstC8I GCNNGC 5 cut(s) 1288, 1736, 2309, 2428, 2484
BstDEI CTNAG 9 cut(s) 390, 636, 695, 719, 996, 1058, 1901, 2025, 2322
BstDSI CCRYGG 1 cut(s) 683
BstENI CCTNNNNNAGG 1 cut(s) 2436
BstF5I GGATG 8 cut(s) 249, 305, 530, 1043, 1288, 2164, 2286, 2317
BstFNI CGCG 1 cut(s) 843
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 2 cut(s) 161, 1047
BstMAI GTCTC 2 cut(s) 1433, 1877
BstMCI CGRYCG 1 cut(s) 847
BstMWI GCNNNNNNNGC 1 cut(s) 1647
BstNI CCWGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
BstNSI RCATGY 2 cut(s) 781, 1774
BstPAI GACNNNNGTC 1 cut(s) 585
BstSCI CCNGG 9 cut(s) 205, 589, 1065, 1290, 1491, 1785, 1895, 2243, 2395
BstSLI GKGCMC 1 cut(s) 712
BstUI CGCG 1 cut(s) 843
BstV1I GCAGC 3 cut(s) 1049, 1223, 2056
BstV2I GAAGAC 2 cut(s) 585, 1349
BstX2I RGATCY 2 cut(s) 448, 1918
BstXI CCANNNNNNTGG 1 cut(s) 1011
BstYI RGATCY 2 cut(s) 448, 1918
BstZ17I GTATAC 1 cut(s) 396
Bsu36I CCTNAGG 2 cut(s) 636, 2322
BsuI GTATCC 1 cut(s) 1111
BtgI CCRYGG 1 cut(s) 683
BtsCI GGATG 8 cut(s) 249, 305, 530, 1043, 1288, 2164, 2286, 2317
BtsIMutI CAGTG 1 cut(s) 151
Cac8I GCNNGC 5 cut(s) 1288, 1736, 2309, 2428, 2484
CaiI CAGNNNCTG 1 cut(s) 2432
CciI TCATGA 1 cut(s) 1668
CfoI GCGC 2 cut(s) 161, 1047
Cfr13I GGNCC 6 cut(s) 680, 882, 1425, 1489, 1580, 2429
CseI GACGC 1 cut(s) 2331
CsiI ACCWGGT 1 cut(s) 2395
Csp6I GTAC 7 cut(s) 75, 241, 413, 781, 896, 1762, 1820
CspCI CAANNNNNGTGG 2 cut(s) 1835, 1870
CviQI GTAC 7 cut(s) 75, 241, 413, 781, 896, 1762, 1820
DdeI CTNAG 9 cut(s) 390, 636, 695, 719, 996, 1058, 1901, 2025, 2322
DrdI GACNNNNNNGTC 1 cut(s) 1027
DseDI GACNNNNNNGTC 1 cut(s) 1027
EaeI YGGCCR 3 cut(s) 1288, 1648, 2330
Eam1104I CTCTTC 3 cut(s) 1511, 1622, 1737
EarI CTCTTC 3 cut(s) 1511, 1622, 1737
Ecl136II GAGCTC 2 cut(s) 1498, 2256
Eco130I CCWWGG 3 cut(s) 162, 683, 1651
Eco147I AGGCCT 2 cut(s) 724, 2224
Eco24I GRGCYC 2 cut(s) 1500, 2258
Eco31I GGTCTC 1 cut(s) 1877
Eco32I GATATC 2 cut(s) 338, 1267
Eco47I GGWCC 3 cut(s) 1425, 1489, 1580
Eco53kI GAGCTC 2 cut(s) 1498, 2256
Eco57I CTGAAG 4 cut(s) 184, 1302, 1484, 1682
Eco81I CCTNAGG 2 cut(s) 636, 2322
Eco88I CYCGRG 1 cut(s) 1866
EcoICRI GAGCTC 2 cut(s) 1498, 2256
EcoNI CCTNNNNNAGG 1 cut(s) 2436
EcoO109I RGGNCCY 3 cut(s) 882, 1489, 2429
EcoRI GAATTC 2 cut(s) 596, 1015
EcoRII CCWGG 9 cut(s) 205, 589, 1065, 1290, 1491, 1785, 1895, 2243, 2395
EcoRV GATATC 2 cut(s) 338, 1267
EcoT14I CCWWGG 3 cut(s) 162, 683, 1651
EcoT22I ATGCAT 2 cut(s) 631, 892
EcoT38I GRGCYC 2 cut(s) 1500, 2258
ErhI CCWWGG 3 cut(s) 162, 683, 1651
FalI AAGNNNNNCTT 2 cut(s) 2283, 2315
FaqI GGGAC 4 cut(s) 114, 542, 1609, 2053
FauI CCCGC 1 cut(s) 1509
FauNDI CATATG 1 cut(s) 2044
FbaI TGATCA 2 cut(s) 913, 1804
FblI GTMKAC 3 cut(s) 395, 979, 1413
Fnu4HI GCNGC 4 cut(s) 1063, 1237, 1240, 2070
FokI GGATG 8 cut(s) 236, 292, 537, 1050, 1295, 2151, 2273, 2304
FriOI GRGCYC 2 cut(s) 1500, 2258
Fsp4HI GCNGC 4 cut(s) 1063, 1237, 1240, 2070
FspBI CTAG 6 cut(s) 834, 900, 1262, 1527, 1601, 1986
FspI TGCGCA 1 cut(s) 1046
GlaI GCGC 2 cut(s) 160, 1046
GluI GCNGC 4 cut(s) 1063, 1237, 1240, 2070
GsuI CTGGAG 4 cut(s) 1514, 2019, 2034, 2147
HaeII RGCGCY 1 cut(s) 162
HapII CCGG 3 cut(s) 309, 1115, 1280
HgaI GACGC 1 cut(s) 2331
HhaI GCGC 2 cut(s) 161, 1047
Hin1I GRCGYC 1 cut(s) 2342
Hin6I GCGC 2 cut(s) 159, 1045
HinP1I GCGC 2 cut(s) 159, 1045
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HindIII AAGCTT 2 cut(s) 478, 1559
HinfI GANTC 9 cut(s) 14, 302, 425, 987, 1720, 1892, 1957, 2240, 2447
HpaII CCGG 3 cut(s) 309, 1115, 1280
HphI GGTGA 3 cut(s) 62, 993, 1265
Hpy188III TCNNGA 7 cut(s) 429, 1280, 1386, 1669, 2168, 2321, 2408
HpyAV CCTTC 7 cut(s) 501, 1466, 1562, 1598, 2136, 2210, 2214
HpyCH4III ACNGT 5 cut(s) 224, 265, 1187, 1378, 1824
HpyCH4IV ACGT 3 cut(s) 1410, 1840, 2281
HpyF10VI GCNNNNNNNGC 1 cut(s) 1647
HpyF3I CTNAG 9 cut(s) 390, 636, 695, 719, 996, 1058, 1901, 2025, 2322
HpySE526I ACGT 3 cut(s) 1410, 1840, 2281
Hsp92I GRCGYC 1 cut(s) 2342
HspAI GCGC 2 cut(s) 159, 1045
Kpn2I TCCGGA 1 cut(s) 1279
Ksp22I TGATCA 2 cut(s) 913, 1804
LguI GCTCTTC 1 cut(s) 1511
LmnI GCTCC 3 cut(s) 863, 1495, 1503
Lsp1109I GCAGC 3 cut(s) 1049, 1223, 2056
LweI GCATC 5 cut(s) 132, 899, 1273, 1409, 2295
MabI ACCWGGT 1 cut(s) 2395
MaeI CTAG 6 cut(s) 834, 900, 1262, 1527, 1601, 1986
MaeII ACGT 3 cut(s) 1410, 1840, 2281
MaeIII GTNAC 7 cut(s) 209, 224, 504, 956, 999, 1029, 2277
MbiI CCGCTC 1 cut(s) 1504
MflI RGATCY 2 cut(s) 448, 1918
MhlI GDGCHC 3 cut(s) 712, 1500, 2258
MlsI TGGCCA 2 cut(s) 1290, 1650
MluNI TGGCCA 2 cut(s) 1290, 1650
MlyI GAGTC 2 cut(s) 23, 296
Mox20I TGGCCA 2 cut(s) 1290, 1650
Mph1103I ATGCAT 2 cut(s) 631, 892
MroI TCCGGA 1 cut(s) 1279
MscI TGGCCA 2 cut(s) 1290, 1650
MseI TTAA 5 cut(s) 38, 534, 546, 821, 1994
MslI CAYNNNNRTG 3 cut(s) 759, 1036, 1307
Msp20I TGGCCA 2 cut(s) 1290, 1650
MspI CCGG 3 cut(s) 309, 1115, 1280
MspR9I CCNGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
Mva1269I GAATGC 2 cut(s) 1166, 1395
MvaI CCWGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
MvnI CGCG 1 cut(s) 843
MwoI GCNNNNNNNGC 1 cut(s) 1647
NcoI CCATGG 1 cut(s) 683
NdeI CATATG 1 cut(s) 2044
NlaIV GGNNCC 4 cut(s) 621, 829, 865, 2058
NmeAIII GCCGAG 1 cut(s) 892
NmuCI GTSAC 2 cut(s) 999, 1029
NsbI TGCGCA 1 cut(s) 1046
NsiI ATGCAT 2 cut(s) 631, 892
NspI RCATGY 2 cut(s) 781, 1774
NspV TTCGAA 1 cut(s) 1306
PagI TCATGA 1 cut(s) 1668
PceI AGGCCT 2 cut(s) 724, 2224
PciI ACATGT 1 cut(s) 777
PciSI GCTCTTC 1 cut(s) 1511
PctI GAATGC 2 cut(s) 1166, 1395
PfeI GAWTC 7 cut(s) 425, 987, 1720, 1892, 1957, 2240, 2447
PflMI CCANNNNNTGG 1 cut(s) 689
PkrI GCNGC 4 cut(s) 1064, 1238, 1241, 2071
Ple19I CGATCG 1 cut(s) 847
PleI GAGTC 2 cut(s) 22, 296
PpsI GAGTC 2 cut(s) 22, 296
PpuMI RGGWCCY 1 cut(s) 1489
PscI ACATGT 1 cut(s) 777
PshAI GACNNNNGTC 1 cut(s) 585
PsiI TTATAA 3 cut(s) 1682, 2135, 2354
Psp124BI GAGCTC 2 cut(s) 1500, 2258
Psp1406I AACGTT 1 cut(s) 1840
Psp5II RGGWCCY 1 cut(s) 1489
Psp6I CCWGG 9 cut(s) 205, 589, 1065, 1290, 1491, 1785, 1895, 2243, 2395
PspGI CCWGG 9 cut(s) 205, 589, 1065, 1290, 1491, 1785, 1895, 2243, 2395
PspN4I GGNNCC 4 cut(s) 621, 829, 865, 2058
PspPI GGNCC 6 cut(s) 680, 882, 1425, 1489, 1580, 2429
PspPPI RGGWCCY 1 cut(s) 1489
PstNI CAGNNNCTG 1 cut(s) 2432
PsuI RGATCY 2 cut(s) 448, 1918
PvuI CGATCG 1 cut(s) 847
RgaI GCGATCGC 1 cut(s) 847
RsaI GTAC 7 cut(s) 76, 242, 414, 782, 897, 1763, 1821
RsaNI GTAC 7 cut(s) 75, 241, 413, 781, 896, 1762, 1820
RseI CAYNNNNRTG 3 cut(s) 759, 1036, 1307
SacI GAGCTC 2 cut(s) 1500, 2258
SapI GCTCTTC 1 cut(s) 1511
SaqAI TTAA 5 cut(s) 38, 534, 546, 821, 1994
SatI GCNGC 4 cut(s) 1063, 1237, 1240, 2070
Sau96I GGNCC 6 cut(s) 680, 882, 1425, 1489, 1580, 2429
ScaI AGTACT 1 cut(s) 1821
SchI GAGTC 2 cut(s) 23, 296
ScrFI CCNGG 9 cut(s) 207, 591, 1067, 1292, 1493, 1787, 1897, 2245, 2397
SduI GDGCHC 3 cut(s) 712, 1500, 2258
SexAI ACCWGGT 1 cut(s) 2395
SfaAI GCGATCGC 1 cut(s) 847
SfaNI GCATC 5 cut(s) 132, 899, 1273, 1409, 2295
SfuI TTCGAA 1 cut(s) 1306
SgfI GCGATCGC 1 cut(s) 847
SinI GGWCC 3 cut(s) 1425, 1489, 1580
SmiMI CAYNNNNRTG 3 cut(s) 759, 1036, 1307
SseBI AGGCCT 2 cut(s) 724, 2224
SsiI CCGC 2 cut(s) 1239, 1502
SspI AATATT 1 cut(s) 1992
SspMI CTAG 6 cut(s) 834, 900, 1262, 1527, 1601, 1986
SstI GAGCTC 2 cut(s) 1500, 2258
StuI AGGCCT 2 cut(s) 724, 2224
StyD4I CCNGG 9 cut(s) 205, 589, 1065, 1290, 1491, 1785, 1895, 2243, 2395
StyI CCWWGG 3 cut(s) 162, 683, 1651
TaaI ACNGT 5 cut(s) 224, 265, 1187, 1378, 1824
TaiI ACGT 3 cut(s) 1413, 1843, 2284
TaqI TCGA 4 cut(s) 215, 483, 1019, 1306
TatI WGTACW 2 cut(s) 780, 1819
TauI GCSGC 1 cut(s) 1242
TfiI GAWTC 7 cut(s) 425, 987, 1720, 1892, 1957, 2240, 2447
Tru1I TTAA 5 cut(s) 38, 534, 546, 821, 1994
Tru9I TTAA 5 cut(s) 38, 534, 546, 821, 1994
TscAI CASTG 1 cut(s) 151
TseFI GTSAC 2 cut(s) 999, 1029
TseI GCWGC 3 cut(s) 1062, 1236, 2069
Tsp45I GTSAC 2 cut(s) 999, 1029
TspGWI ACGGA 1 cut(s) 1794
TspRI CASTG 1 cut(s) 151
Van91I CCANNNNNTGG 1 cut(s) 689
VneI GTGCAC 1 cut(s) 708
VpaK11BI GGWCC 3 cut(s) 1425, 1489, 1580
XagI CCTNNNNNAGG 1 cut(s) 2436
XapI RAATTY 6 cut(s) 40, 234, 596, 665, 1015, 1965
XceI RCATGY 2 cut(s) 781, 1774
XcmI CCANNNNNNNNNTGG 3 cut(s) 1783, 1853, 2186
XmiI GTMKAC 3 cut(s) 395, 979, 1413
XspI CTAG 6 cut(s) 834, 900, 1262, 1527, 1601, 1986
ZrmI AGTACT 1 cut(s) 1821
Zsp2I ATGCAT 2 cut(s) 631, 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.