Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Reverse (-)

25307741 .. 25310573

Gene Structure 2833 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1185600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGGTGGTCTTTGTTTTTCGTTTATGATCAGCGCCAACTTGTTCTTCTTGTCATCAACAATTTCCTTTGCAGTTGACGGCTTTACACCTTCGCAGTGTGTCCTTGATGGAACGACGTTGGTTTCAAGTGATGGAAGCTTTGAGCTCGGTTTCTTTAGTCCAGGTAGTTCCAAGAACCGTTACTTGGGAATTTGGTTCAAGAATGTCCCGGTGAGAACGGTTGTTTGGGTTGCAAACAGATGCAACCCCATCAATGATACTTCCGGCGTGTTGATGATAAACAGCACAGGTAATCTTGTGCTTTTGAGTCAGAATAGCAGCGTTGTTTGGTCGACGAGTTTAGTTAAACAGGCCCAAAATGCGACGGTAGAGCTCTTGGATTCCGGGAATTTGGTGCTAAGAGATGCAAAAGATGGAAATTCAGGAACTCCTTTGTGGCAAAGCTTCGACTATCCTTCCGATACATTATTACCAGGAATGAAGTTGGGGTGGGACTTGAGAACAGGCCTAAAACGGCATTTGTCAGCATGGAAAAATTCAGATGACCCGTGTCCCGGAGATTTTACTTACGGAATTGAAATGCAACTTCAAGCATATCCTGAGGCATATATTCTGAACGGAATTACAAAATTCTTTCGCACCAGCGCATGGAATGAACTGACAATCTGTGGTTCACCCGAACATCCTAGTCCTCGTTATAGTTTCAATTTTGTCTACAACGACGATGAAGTTTACGTCACATACAAACCGAAGATTGAGTCGATACTGTCAAGAGTGGCTTTGAACCAAACCACCAGCACATGTGCTCGGTTTCAGTGGAAGGTGGGATATCAAGCTTGGCAGGATTTTTCATCAAGACCTACAGAATCATGTGATTATTATGGCTTCTGTGGAGCCAATGGAAATTGTACCAGTGAGGATCCGGTCTGCAAATGTATACAAGGATTCAGCCCCAAGTCTCAAGAAAAGTGGAATTTAGCAGACTGGTCTCTAGGTTGCGTGCGCAATAAACCATTAAGCTGCCATGAAGGAGATAAAGATGAGTTTCTCAAATTTGATGGCTTCAAATTGCCAGATACTACAAATTCTTGGGTGGACAAAAGTATGAATCTCAAGGAATGCAGAGACAAATGCTTGAAAAACTGCTCCTGTACTGCTTATACGAGCTCAGATATCGGAGGAGGAAGTGGTGGCTGCACCATCTGGTTTGGTGATCTAATAGATATCAAACAGGTTCCTGTTGCTGGAAAGGAAATATATATTCGAACGTCAGCTGCTGAAATAGTCAACAATGAAGGAGAAAACAGCACAAAAGTGAAGATTGCAATTATAGTTGTTGGCATAGCAATAGTGTTTTCCGGAGTGCTGTTAGTTGGCTATGTCATTCGCCGAAGAAAGAGAAAAAATAAAGAAATAAGGGAAAGAAATGAGGACAATGAAGGGGCTCCAAGAGGGGACATGGAGCTCCCACTCTTTGACCTGATGACAGTAGCTAGGGCCACGGATAACTTTTCAAGCAATAAAAAGCTCGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGGACGCTGGCCGACGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGTTCTAGCCAAGGATTGAACGAGTTCATGAATGAAGTTATATTGATTGCCAAACTCCAGCACCGAAATCTGGTAAGGCTTCTTGGTTGTTGCGTTCAAGGAGAGGAGAAATTGCTACTTTATGAATACATGCCCAACGGAAGCCTAGACTCCTCCATTTTTGATGAAACGAGAAGAGAACTGTTCGATTGGCCTAAACGTTTCAACATTATATGTGGCATTGCTCGAGGTCTCGTCTATCTCCATCAGGATTCTAGGCTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATAATGAAATGAATCCGAAAAATTTCAGACTTTGGCCTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

652

Amino Acids

72.75

Weight (kDa)

6.96

Isoelectric Point (pI)

38.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	73 - 178	1.5e-38	D-mannose binding lectin
S_locus_glycop	PF00954	212 - 320	9.5e-21	S-locus glycoprotein domain
PAN_2	PF08276	341 - 409	1.8e-22	PAN-like domain
Pkinase	PF00069	505 - 642	1.6e-25	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	506 - 641	1.7e-28	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1004
AccB7I	CCANNNNNTGG	1 cut(s)	648
AccI	GTMKAC	3 cut(s)	332, 714, 937
AccIII	TCCGGA	1 cut(s)	1358
AclI	AACGTT	1 cut(s)	1807
AclWI	GGATC	2 cut(s)	914, 927
AcoI	YGGCCR	1 cut(s)	1569
AcsI	RAATTY	9 cut(s)	189, 388, 418, 535, 629, 973, 1052, 1084, 1933
AfaI	GTAC	2 cut(s)	910, 1153
AfiI	CCNNNNNNNGG	5 cut(s)	184, 554, 648, 1244, 1678
AflIII	ACRYGT	1 cut(s)	800
AjnI	CCWGG	2 cut(s)	160, 472
AjuI	GAANNNNNNNTTGG	8 cut(s)	29, 61, 167, 199, 208, 240, 1527, 1559
AleI	CACNNNNGTG	1 cut(s)	1313
Alw21I	GWGCWC	5 cut(s)	147, 375, 808, 1169, 1467
Alw26I	GTCTC	4 cut(s)	963, 993, 1119, 1844
AlwI	GGATC	2 cut(s)	914, 927
AlwNI	CAGNNNCTG	1 cut(s)	1277
Ama87I	CYCGRG	1 cut(s)	1833
Aor13HI	TCCGGA	1 cut(s)	1358
AoxI	GGCC	7 cut(s)	351, 505, 1497, 1546, 1569, 1799, 1946
ApeKI	GCWGC	4 cut(s)	318, 1020, 1194, 1274
ApoI	RAATTY	9 cut(s)	189, 388, 418, 535, 629, 973, 1052, 1084, 1933
ArsI	GACNNNNNNTTYG	2 cut(s)	743, 775
Asp700I	GAANNNNTTC	2 cut(s)	1631, 1934
AspLEI	GCGC	3 cut(s)	35, 647, 1005
AspS9I	GGNCC	3 cut(s)	352, 1497, 1547
AsuC2I	CCSGG	3 cut(s)	209, 385, 555
AsuHPI	GGTGA	3 cut(s)	223, 666, 1223
AsuII	TTCGAA	1 cut(s)	1264
AvaI	CYCGRG	1 cut(s)	1833
AxyI	CCTNAGG	1 cut(s)	600
BamHI	GGATCC	1 cut(s)	919
BanII	GRGCYC	5 cut(s)	147, 375, 1169, 1447, 1467
Bbv12I	GWGCWC	5 cut(s)	147, 375, 808, 1169, 1467
BbvI	GCAGC	4 cut(s)	330, 1007, 1181, 1261
BccI	CCATC	7 cut(s)	101, 125, 257, 407, 1052, 1208, 1860
BceAI	ACGGC	2 cut(s)	94, 530
BciT130I	CCWGG	2 cut(s)	162, 474
BclI	TGATCA	1 cut(s)	27
BcnI	CCSGG	3 cut(s)	209, 385, 555
BcoDI	GTCTC	4 cut(s)	963, 993, 1119, 1844
BfaI	CTAG	8 cut(s)	687, 992, 1494, 1614, 1754, 1863, 1950, 1954
BfmI	CTRYAG	1 cut(s)	861
BfoI	RGCGCY	1 cut(s)	36
BglII	AGATCT	1 cut(s)	1885
BisI	GCNGC	4 cut(s)	319, 1021, 1195, 1275
BlsI	GCNGC	4 cut(s)	320, 1022, 1196, 1276
Bme1390I	CCNGG	5 cut(s)	162, 209, 385, 474, 555
BmeT110I	CYCGRG	1 cut(s)	1833
BmgT120I	GGNCC	3 cut(s)	352, 1497, 1547
BmiI	GGNNCC	4 cut(s)	895, 921, 1236, 1446
BmrFI	CCNGG	5 cut(s)	162, 209, 385, 474, 555
BmsI	GCATC	2 cut(s)	230, 394
BoxI	GACNNNNGTC	1 cut(s)	549
BpmI	CTGGAG	1 cut(s)	1649
Bpu10I	CCTNAGC	1 cut(s)	1868
Bpu14I	TTCGAA	1 cut(s)	1264
BpuEI	CTTGAG	3 cut(s)	517, 945, 1097
BpuMI	CCSGG	3 cut(s)	209, 385, 555
BsaI	GGTCTC	2 cut(s)	993, 1844
BsaJI	CCNNGG	2 cut(s)	1500, 1618
BsaWI	WCCGGW	2 cut(s)	922, 1358
Bsc4I	CCNNNNNNNGG	5 cut(s)	184, 554, 648, 1244, 1678
Bse1I	ACTGG	2 cut(s)	912, 989
Bse21I	CCTNAGG	1 cut(s)	600
Bse3DI	GCAATG	1 cut(s)	1827
BseAI	TCCGGA	1 cut(s)	1358
BseBI	CCWGG	2 cut(s)	162, 474
BseDI	CCNNGG	2 cut(s)	1500, 1618
BseGI	GGATG	1 cut(s)	682
BseLI	CCNNNNNNNGG	5 cut(s)	184, 554, 648, 1244, 1678
BseMI	GCAATG	1 cut(s)	1827
BseMII	CTCAG	2 cut(s)	591, 1182
BseNI	ACTGG	2 cut(s)	912, 989
BseRI	GAGGAG	3 cut(s)	1194, 1727, 1750
BseXI	GCAGC	4 cut(s)	330, 1007, 1181, 1261
BsgI	GTGCAG	1 cut(s)	1180
BshFI	GGCC	7 cut(s)	353, 507, 1499, 1548, 1571, 1801, 1948
BsiHKAI	GWGCWC	5 cut(s)	147, 375, 808, 1169, 1467
BsiHKCI	CYCGRG	1 cut(s)	1833
BsiSI	CCGG	6 cut(s)	209, 264, 384, 555, 923, 1359
BslFI	GGGAC	5 cut(s)	191, 506, 537, 1469, 1576
BslI	CCNNNNNNNGG	5 cut(s)	184, 554, 648, 1244, 1678
BsmAI	GTCTC	4 cut(s)	963, 993, 1119, 1844
BsmFI	GGGAC	5 cut(s)	191, 506, 537, 1469, 1576
BsmI	GAATGC	1 cut(s)	1124
BsnI	GGCC	7 cut(s)	353, 507, 1499, 1548, 1571, 1801, 1948
Bso31I	GGTCTC	2 cut(s)	993, 1844
BsoBI	CYCGRG	1 cut(s)	1833
Bsp119I	TTCGAA	1 cut(s)	1264
Bsp1286I	GDGCHC	6 cut(s)	147, 375, 808, 1169, 1447, 1467
Bsp13I	TCCGGA	1 cut(s)	1358
Bsp143I	GATC	4 cut(s)	27, 919, 1213, 1885
BspANI	GGCC	7 cut(s)	353, 507, 1499, 1548, 1571, 1801, 1948
BspCNI	CTCAG	2 cut(s)	592, 1181
BspEI	TCCGGA	1 cut(s)	1358
BspHI	TCATGA	1 cut(s)	1635
BspLI	GGNNCC	4 cut(s)	895, 921, 1236, 1446
BspPI	GGATC	2 cut(s)	914, 927
BspT104I	TTCGAA	1 cut(s)	1264
BspTNI	GGTCTC	2 cut(s)	993, 1844
BsrDI	GCAATG	1 cut(s)	1827
BsrI	ACTGG	2 cut(s)	912, 989
BssECI	CCNNGG	2 cut(s)	1500, 1618
BssMI	GATC	4 cut(s)	27, 919, 1213, 1885
BssNAI	GTATAC	1 cut(s)	938
BssT1I	CCWWGG	1 cut(s)	1618
Bst1107I	GTATAC	1 cut(s)	938
Bst2UI	CCWGG	2 cut(s)	162, 474
Bst4CI	ACNGT	6 cut(s)	179, 220, 367, 768, 1489, 1791
Bst6I	CTCTTC	2 cut(s)	1589, 1777
BstBI	TTCGAA	1 cut(s)	1264
BstC8I	GCNNGC	2 cut(s)	1001, 1569
BstDEI	CTNAG	4 cut(s)	398, 600, 1168, 1868
BstDSI	CCRYGG	1 cut(s)	1500
BstF5I	GGATG	1 cut(s)	682
BstH2I	RGCGCY	1 cut(s)	36
BstHHI	GCGC	3 cut(s)	35, 647, 1005
BstKTI	GATC	4 cut(s)	30, 922, 1216, 1888
BstMAI	GTCTC	4 cut(s)	963, 993, 1119, 1844
BstMBI	GATC	4 cut(s)	27, 919, 1213, 1885
BstMWI	GCNNNNNNNGC	1 cut(s)	359
BstNI	CCWGG	2 cut(s)	162, 474
BstNSI	RCATGY	2 cut(s)	804, 1741
BstPAI	GACNNNNGTC	1 cut(s)	549
BstSCI	CCNGG	5 cut(s)	160, 207, 383, 472, 553
BstSFI	CTRYAG	1 cut(s)	861
BstV1I	GCAGC	4 cut(s)	330, 1007, 1181, 1261
BstX2I	RGATCY	2 cut(s)	919, 1885
BstYI	RGATCY	2 cut(s)	919, 1885
BstZ17I	GTATAC	1 cut(s)	938
Bsu36I	CCTNAGG	1 cut(s)	600
BsuRI	GGCC	7 cut(s)	353, 507, 1499, 1548, 1571, 1801, 1948
BtgI	CCRYGG	1 cut(s)	1500
BtsCI	GGATG	1 cut(s)	682
BtsI	GCAGTG	1 cut(s)	101
BtsIMutI	CAGTG	3 cut(s)	101, 821, 919
Cac8I	GCNNGC	2 cut(s)	1001, 1569
CaiI	CAGNNNCTG	1 cut(s)	1277
CciI	TCATGA	1 cut(s)	1635
CfoI	GCGC	3 cut(s)	35, 647, 1005
Cfr13I	GGNCC	3 cut(s)	352, 1497, 1547
CseI	GACGC	1 cut(s)	1573
Csp6I	GTAC	2 cut(s)	909, 1152
CspCI	CAANNNNNGTGG	2 cut(s)	950, 985
CviAII	CATG	8 cut(s)	528, 648, 801, 870, 1025, 1459, 1636, 1738
CviQI	GTAC	2 cut(s)	909, 1152
DdeI	CTNAG	4 cut(s)	398, 600, 1168, 1868
DpnI	GATC	4 cut(s)	29, 921, 1215, 1887
DpnII	GATC	4 cut(s)	27, 919, 1213, 1885
EaeI	YGGCCR	1 cut(s)	1569
Eam1104I	CTCTTC	2 cut(s)	1589, 1777
EarI	CTCTTC	2 cut(s)	1589, 1777
Ecl136II	GAGCTC	4 cut(s)	145, 373, 1167, 1465
Eco130I	CCWWGG	1 cut(s)	1618
Eco147I	AGGCCT	1 cut(s)	507
Eco24I	GRGCYC	5 cut(s)	147, 375, 1169, 1447, 1467
Eco31I	GGTCTC	2 cut(s)	993, 1844
Eco32I	GATATC	3 cut(s)	830, 1174, 1225
Eco53kI	GAGCTC	4 cut(s)	145, 373, 1167, 1465
Eco81I	CCTNAGG	1 cut(s)	600
Eco88I	CYCGRG	1 cut(s)	1833
EcoICRI	GAGCTC	4 cut(s)	145, 373, 1167, 1465
EcoRII	CCWGG	2 cut(s)	160, 472
EcoRV	GATATC	3 cut(s)	830, 1174, 1225
EcoT14I	CCWWGG	1 cut(s)	1618
EcoT38I	GRGCYC	5 cut(s)	147, 375, 1169, 1447, 1467
ErhI	CCWWGG	1 cut(s)	1618
FaeI	CATG	8 cut(s)	531, 651, 804, 873, 1028, 1462, 1639, 1741
FalI	AAGNNNNNCTT	2 cut(s)	763, 795
FaqI	GGGAC	5 cut(s)	191, 506, 537, 1469, 1576
FatI	CATG	8 cut(s)	527, 647, 800, 869, 1024, 1458, 1635, 1737
FbaI	TGATCA	1 cut(s)	27
FblI	GTMKAC	3 cut(s)	332, 714, 937
Fnu4HI	GCNGC	4 cut(s)	319, 1021, 1195, 1275
FokI	GGATG	1 cut(s)	669
FriOI	GRGCYC	5 cut(s)	147, 375, 1169, 1447, 1467
Fsp4HI	GCNGC	4 cut(s)	319, 1021, 1195, 1275
FspBI	CTAG	8 cut(s)	687, 992, 1494, 1614, 1754, 1863, 1950, 1954
FspI	TGCGCA	1 cut(s)	1004
GlaI	GCGC	3 cut(s)	34, 646, 1004
GluI	GCNGC	4 cut(s)	319, 1021, 1195, 1275
GsuI	CTGGAG	1 cut(s)	1649
HaeII	RGCGCY	1 cut(s)	36
HaeIII	GGCC	7 cut(s)	353, 507, 1499, 1548, 1571, 1801, 1948
HapII	CCGG	6 cut(s)	209, 264, 384, 555, 923, 1359
HgaI	GACGC	1 cut(s)	1573
HhaI	GCGC	3 cut(s)	35, 647, 1005
Hin1II	CATG	8 cut(s)	531, 651, 804, 873, 1028, 1462, 1639, 1741
Hin6I	GCGC	3 cut(s)	33, 645, 1003
HinP1I	GCGC	3 cut(s)	33, 645, 1003
HincII	GTYRAC	3 cut(s)	76, 333, 1288
HindII	GTYRAC	3 cut(s)	76, 333, 1288
HindIII	AAGCTT	3 cut(s)	136, 442, 834
HinfI	GANTC	9 cut(s)	307, 380, 758, 866, 945, 1108, 1757, 1859, 1924
HpaII	CCGG	6 cut(s)	209, 264, 384, 555, 923, 1359
HphI	GGTGA	3 cut(s)	223, 666, 1223
Hpy166II	GTNNAC	9 cut(s)	76, 333, 674, 715, 733, 938, 1096, 1288, 1555
Hpy188I	TCNGA	9 cut(s)	312, 460, 541, 615, 1171, 1178, 1532, 1929, 1940
Hpy8I	GTNNAC	9 cut(s)	76, 333, 674, 715, 733, 938, 1096, 1288, 1555
Hpy99I	CGWCG	5 cut(s)	118, 337, 367, 725, 1577
HpyAV	CCTTC	7 cut(s)	99, 465, 814, 1022, 1289, 1433, 1529
HpyCH4III	ACNGT	6 cut(s)	179, 220, 367, 768, 1489, 1791
HpyCH4IV	ACGT	4 cut(s)	116, 735, 1268, 1807
HpyCH4V	TGCA	9 cut(s)	71, 233, 243, 407, 583, 930, 1122, 1197, 1325
HpyF10VI	GCNNNNNNNGC	1 cut(s)	359
HpyF3I	CTNAG	4 cut(s)	398, 600, 1168, 1868
HpySE526I	ACGT	4 cut(s)	116, 735, 1268, 1807
Hsp92II	CATG	8 cut(s)	531, 651, 804, 873, 1028, 1462, 1639, 1741
HspAI	GCGC	3 cut(s)	33, 645, 1003
Kpn2I	TCCGGA	1 cut(s)	1358
Ksp22I	TGATCA	1 cut(s)	27
Kzo9I	GATC	4 cut(s)	27, 919, 1213, 1885
LmnI	GCTCC	5 cut(s)	893, 1151, 1450, 1462, 1470
Lsp1109I	GCAGC	4 cut(s)	330, 1007, 1181, 1261
LweI	GCATC	2 cut(s)	230, 394
MaeI	CTAG	8 cut(s)	687, 992, 1494, 1614, 1754, 1863, 1950, 1954
MaeII	ACGT	4 cut(s)	116, 735, 1268, 1807
MaeIII	GTNAC	2 cut(s)	179, 736
MalI	GATC	4 cut(s)	29, 921, 1215, 1887
MboI	GATC	4 cut(s)	27, 919, 1213, 1885
MboII	GAAGA	6 cut(s)	37, 763, 1330, 1404, 1606, 1794
MflI	RGATCY	2 cut(s)	919, 1885
MhlI	GDGCHC	6 cut(s)	147, 375, 808, 1169, 1447, 1467
MlyI	GAGTC	3 cut(s)	316, 767, 1751
MroI	TCCGGA	1 cut(s)	1358
MroXI	GAANNNNTTC	2 cut(s)	1631, 1934
MseI	TTAA	2 cut(s)	345, 1016
MslI	CAYNNNNRTG	1 cut(s)	1313
MspA1I	CMGCKG	1 cut(s)	1274
MspI	CCGG	6 cut(s)	209, 264, 384, 555, 923, 1359
MspR9I	CCNGG	5 cut(s)	162, 209, 385, 474, 555
Mva1269I	GAATGC	1 cut(s)	1124
MvaI	CCWGG	2 cut(s)	162, 474
MwoI	GCNNNNNNNGC	1 cut(s)	359
NciI	CCSGG	3 cut(s)	209, 385, 555
NdeII	GATC	4 cut(s)	27, 919, 1213, 1885
NlaIII	CATG	8 cut(s)	531, 651, 804, 873, 1028, 1462, 1639, 1741
NlaIV	GGNNCC	4 cut(s)	895, 921, 1236, 1446
NmuCI	GTSAC	1 cut(s)	736
NsbI	TGCGCA	1 cut(s)	1004
NspI	RCATGY	2 cut(s)	804, 1741
NspV	TTCGAA	1 cut(s)	1264
OliI	CACNNNNGTG	1 cut(s)	1313
PaeR7I	CTCGAG	1 cut(s)	1833
PagI	TCATGA	1 cut(s)	1635
PceI	AGGCCT	1 cut(s)	507
PciI	ACATGT	1 cut(s)	800
PctI	GAATGC	1 cut(s)	1124
PdmI	GAANNNNTTC	2 cut(s)	1631, 1934
PfeI	GAWTC	6 cut(s)	380, 866, 945, 1108, 1859, 1924
PflMI	CCANNNNNTGG	1 cut(s)	648
PfoI	TCCNGGA	2 cut(s)	383, 553
PkrI	GCNGC	4 cut(s)	320, 1022, 1196, 1276
PleI	GAGTC	3 cut(s)	315, 766, 1751
PpsI	GAGTC	3 cut(s)	315, 766, 1751
PscI	ACATGT	1 cut(s)	800
PshAI	GACNNNNGTC	1 cut(s)	549
Psp124BI	GAGCTC	4 cut(s)	147, 375, 1169, 1467
Psp1406I	AACGTT	1 cut(s)	1807
Psp6I	CCWGG	2 cut(s)	160, 472
PspGI	CCWGG	2 cut(s)	160, 472
PspN4I	GGNNCC	4 cut(s)	895, 921, 1236, 1446
PspPI	GGNCC	3 cut(s)	352, 1497, 1547
PspXI	VCTCGAGB	1 cut(s)	1833
PstNI	CAGNNNCTG	1 cut(s)	1277
PsuI	RGATCY	2 cut(s)	919, 1885
PvuII	CAGCTG	1 cut(s)	1274
RsaI	GTAC	2 cut(s)	910, 1153
RsaNI	GTAC	2 cut(s)	909, 1152
RseI	CAYNNNNRTG	1 cut(s)	1313
SacI	GAGCTC	4 cut(s)	147, 375, 1169, 1467
SalI	GTCGAC	1 cut(s)	331
SaqAI	TTAA	2 cut(s)	345, 1016
SatI	GCNGC	4 cut(s)	319, 1021, 1195, 1275
Sau3AI	GATC	4 cut(s)	27, 919, 1213, 1885
Sau96I	GGNCC	3 cut(s)	352, 1497, 1547
SchI	GAGTC	3 cut(s)	316, 767, 1751
ScrFI	CCNGG	5 cut(s)	162, 209, 385, 474, 555
SduI	GDGCHC	6 cut(s)	147, 375, 808, 1169, 1447, 1467
SfaNI	GCATC	2 cut(s)	230, 394
SfcI	CTRYAG	1 cut(s)	861
Sfr274I	CTCGAG	1 cut(s)	1833
SfuI	TTCGAA	1 cut(s)	1264
SlaI	CTCGAG	1 cut(s)	1833
SmiMI	CAYNNNNRTG	1 cut(s)	1313
SmlI	CTYRAG	4 cut(s)	496, 960, 1112, 1833
SmoI	CTYRAG	4 cut(s)	496, 960, 1112, 1833
SseBI	AGGCCT	1 cut(s)	507
SspMI	CTAG	8 cut(s)	687, 992, 1494, 1614, 1754, 1863, 1950, 1954
SstI	GAGCTC	4 cut(s)	147, 375, 1169, 1467
StuI	AGGCCT	1 cut(s)	507
StyD4I	CCNGG	5 cut(s)	160, 207, 383, 472, 553
StyI	CCWWGG	1 cut(s)	1618
TaaI	ACNGT	6 cut(s)	179, 220, 367, 768, 1489, 1791
TaiI	ACGT	4 cut(s)	119, 738, 1271, 1810
TaqI	TCGA	6 cut(s)	332, 447, 761, 1264, 1794, 1834
TatI	WGTACW	1 cut(s)	1151
TfiI	GAWTC	6 cut(s)	380, 866, 945, 1108, 1859, 1924
Tru1I	TTAA	2 cut(s)	345, 1016
Tru9I	TTAA	2 cut(s)	345, 1016
TscAI	CASTG	3 cut(s)	101, 821, 919
TseFI	GTSAC	1 cut(s)	736
TseI	GCWGC	4 cut(s)	318, 1020, 1194, 1274
Tsp45I	GTSAC	1 cut(s)	736
TspGWI	ACGGA	5 cut(s)	585, 633, 1517, 1590, 1761
TspRI	CASTG	3 cut(s)	101, 821, 919
Van91I	CCANNNNNTGG	1 cut(s)	648
XapI	RAATTY	9 cut(s)	189, 388, 418, 535, 629, 973, 1052, 1084, 1933
XceI	RCATGY	2 cut(s)	804, 1741
XhoI	CTCGAG	1 cut(s)	1833
XmiI	GTMKAC	3 cut(s)	332, 714, 937
XmnI	GAANNNNTTC	2 cut(s)	1631, 1934
XspI	CTAG	8 cut(s)	687, 992, 1494, 1614, 1754, 1863, 1950, 1954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.