divergent subfamily of APPLE domains
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B_lectin | PF01453 | 87 - 191 | 1.1e-37 | D-mannose binding lectin |
| S_locus_glycop | PF00954 | 224 - 331 | 3e-23 | S-locus glycoprotein domain |
| PAN_2 | PF08276 | 352 - 418 | 1.7e-21 | PAN-like domain |
| PK_Tyr_Ser-Thr | PF07714 | 524 - 769 | 2.3e-40 | Protein tyrosine and serine/threonine kinase |
| Pkinase | PF00069 | 524 - 770 | 3.3e-40 | Protein kinase domain |
| DUF3403 | PF11883 | 777 - 818 | 3.6e-06 | Domain of unknown function (DUF3403) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 2014 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 226 |
| AccIII | TCCGGA | 1 cut(s) | 2215 |
| AclWI | GGATC | 6 cut(s) | 578, 611, 624, 685, 1590, 2207 |
| AcoI | YGGCCR | 1 cut(s) | 526 |
| AcsI | RAATTY | 4 cut(s) | 906, 1192, 1259, 2037 |
| AcuI | CTGAAG | 6 cut(s) | 285, 1287, 1520, 1643, 2301, 2413 |
| AcvI | CACGTG | 1 cut(s) | 2405 |
| AcyI | GRCGYC | 1 cut(s) | 2015 |
| AfaI | GTAC | 8 cut(s) | 239, 776, 984, 1180, 1481, 1558, 2181, 2277 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 226, 535, 593 |
| AflIII | ACRYGT | 1 cut(s) | 1731 |
| AgeI | ACCGGT | 1 cut(s) | 286 |
| AgsI | TTSAA | 6 cut(s) | 191, 644, 695, 973, 1630, 1700 |
| AjnI | CCWGG | 4 cut(s) | 511, 1115, 1941, 2356 |
| AleI | CACNNNNGTG | 1 cut(s) | 1000 |
| Alw21I | GWGCWC | 1 cut(s) | 578 |
| Alw26I | GTCTC | 1 cut(s) | 749 |
| AlwI | GGATC | 6 cut(s) | 578, 611, 624, 685, 1590, 2207 |
| Ama87I | CYCGRG | 1 cut(s) | 1855 |
| Aor13HI | TCCGGA | 1 cut(s) | 2215 |
| AoxI | GGCC | 5 cut(s) | 217, 526, 716, 1793, 1939 |
| ApeKI | GCWGC | 3 cut(s) | 2269, 2338, 2353 |
| ApoI | RAATTY | 4 cut(s) | 906, 1192, 1259, 2037 |
| AseI | ATTAAT | 1 cut(s) | 1493 |
| AsiGI | ACCGGT | 1 cut(s) | 286 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1297 |
| AspLEI | GCGC | 1 cut(s) | 2017 |
| AsuC2I | CCSGG | 1 cut(s) | 2421 |
| AsuHPI | GGTGA | 3 cut(s) | 170, 1838, 2409 |
| AsuII | TTCGAA | 1 cut(s) | 1036 |
| AvaI | CYCGRG | 1 cut(s) | 1855 |
| BamHI | GGATCC | 1 cut(s) | 616 |
| BanI | GGYRCC | 1 cut(s) | 2014 |
| BauI | CACGAG | 3 cut(s) | 621, 1174, 1827 |
| BbrPI | CACGTG | 1 cut(s) | 2405 |
| BbsI | GAAGAC | 1 cut(s) | 2237 |
| Bbv12I | GWGCWC | 1 cut(s) | 578 |
| BbvI | GCAGC | 3 cut(s) | 2281, 2325, 2365 |
| BccI | CCATC | 6 cut(s) | 149, 173, 437, 607, 1019, 2027 |
| BceAI | ACGGC | 2 cut(s) | 703, 1197 |
| BciT130I | CCWGG | 4 cut(s) | 513, 1117, 1943, 2358 |
| BclI | TGATCA | 4 cut(s) | 37, 322, 1765, 1963 |
| BcnI | CCSGG | 1 cut(s) | 2421 |
| BcoDI | GTCTC | 1 cut(s) | 749 |
| BfaI | CTAG | 6 cut(s) | 122, 167, 669, 804, 1890, 1904 |
| BfmI | CTRYAG | 1 cut(s) | 390 |
| BfoI | RGCGCY | 1 cut(s) | 2018 |
| BglII | AGATCT | 1 cut(s) | 1879 |
| BisI | GCNGC | 3 cut(s) | 2270, 2339, 2354 |
| BlsI | GCNGC | 3 cut(s) | 2271, 2340, 2355 |
| Bme1390I | CCNGG | 5 cut(s) | 513, 1117, 1943, 2358, 2421 |
| BmeT110I | CYCGRG | 1 cut(s) | 1855 |
| BmiI | GGNNCC | 3 cut(s) | 618, 873, 2016 |
| BmrFI | CCNGG | 5 cut(s) | 513, 1117, 1943, 2358, 2421 |
| BmrI | ACTGGG | 1 cut(s) | 203 |
| BmsI | GCATC | 2 cut(s) | 1211, 1303 |
| BmuI | ACTGGG | 1 cut(s) | 203 |
| BpiI | GAAGAC | 1 cut(s) | 2237 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1821, 1853 |
| Bpu14I | TTCGAA | 1 cut(s) | 1036 |
| BpuEI | CTTGAG | 3 cut(s) | 576, 1124, 1260 |
| BpuMI | CCSGG | 1 cut(s) | 2421 |
| Bsa29I | ATCGAT | 1 cut(s) | 2196 |
| BsaAI | YACGTR | 1 cut(s) | 2405 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2139 |
| BsaHI | GRCGYC | 1 cut(s) | 2015 |
| BsaJI | CCNNGG | 1 cut(s) | 1599 |
| BsaWI | WCCGGW | 2 cut(s) | 286, 2215 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 118, 148, 321, 351 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 226, 535, 593 |
| Bse118I | RCCGGY | 1 cut(s) | 286 |
| Bse1I | ACTGG | 6 cut(s) | 198, 401, 706, 1558, 1796, 2190 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2139 |
| BseAI | TCCGGA | 1 cut(s) | 2215 |
| BseBI | CCWGG | 4 cut(s) | 513, 1117, 1943, 2358 |
| BseCI | ATCGAT | 1 cut(s) | 2196 |
| BseDI | CCNNGG | 1 cut(s) | 1599 |
| BseGI | GGATG | 5 cut(s) | 618, 1034, 1226, 1554, 2122 |
| BseJI | GATNNNNATC | 1 cut(s) | 2139 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 226, 535, 593 |
| BseMII | CTCAG | 2 cut(s) | 723, 1450 |
| BseNI | ACTGG | 6 cut(s) | 198, 401, 706, 1558, 1796, 2190 |
| BseRI | GAGGAG | 2 cut(s) | 586, 773 |
| BseXI | GCAGC | 3 cut(s) | 2281, 2325, 2365 |
| BsgI | GTGCAG | 3 cut(s) | 102, 1809, 2288 |
| BshFI | GGCC | 5 cut(s) | 219, 528, 718, 1795, 1941 |
| BshNI | GGYRCC | 1 cut(s) | 2014 |
| BshTI | ACCGGT | 1 cut(s) | 286 |
| BshVI | ATCGAT | 1 cut(s) | 2196 |
| BsiHKAI | GWGCWC | 1 cut(s) | 578 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1855 |
| BsiSI | CCGG | 4 cut(s) | 287, 529, 2216, 2421 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 226, 535, 593 |
| BsmAI | GTCTC | 1 cut(s) | 749 |
| BsmI | GAATGC | 5 cut(s) | 31, 690, 1151, 1398, 1695 |
| BsnI | GGCC | 5 cut(s) | 219, 528, 718, 1795, 1941 |
| BsoBI | CYCGRG | 1 cut(s) | 1855 |
| Bsp119I | TTCGAA | 1 cut(s) | 1036 |
| Bsp1286I | GDGCHC | 1 cut(s) | 578 |
| Bsp13I | TCCGGA | 1 cut(s) | 2215 |
| Bsp1407I | TGTACA | 1 cut(s) | 1479 |
| BspANI | GGCC | 5 cut(s) | 219, 528, 718, 1795, 1941 |
| BspCNI | CTCAG | 2 cut(s) | 724, 1449 |
| BspDI | ATCGAT | 1 cut(s) | 2196 |
| BspEI | TCCGGA | 1 cut(s) | 2215 |
| BspHI | TCATGA | 1 cut(s) | 2326 |
| BspLI | GGNNCC | 3 cut(s) | 618, 873, 2016 |
| BspMAI | CTGCAG | 1 cut(s) | 394 |
| BspPI | GGATC | 6 cut(s) | 578, 611, 624, 685, 1590, 2207 |
| BspQI | GCTCTTC | 2 cut(s) | 1322, 1383 |
| BspT104I | TTCGAA | 1 cut(s) | 1036 |
| BspT107I | GGYRCC | 1 cut(s) | 2014 |
| BsrFI | RCCGGY | 1 cut(s) | 286 |
| BsrGI | TGTACA | 1 cut(s) | 1479 |
| BsrI | ACTGG | 6 cut(s) | 198, 401, 706, 1558, 1796, 2190 |
| BssAI | RCCGGY | 1 cut(s) | 286 |
| BssECI | CCNNGG | 1 cut(s) | 1599 |
| BssNI | GRCGYC | 1 cut(s) | 2015 |
| BssSI | CACGAG | 3 cut(s) | 621, 1174, 1827 |
| BssT1I | CCWWGG | 1 cut(s) | 1599 |
| Bst2BI | CACGAG | 3 cut(s) | 621, 1174, 1827 |
| Bst2UI | CCWGG | 4 cut(s) | 513, 1117, 1943, 2358 |
| Bst4CI | ACNGT | 3 cut(s) | 364, 837, 1667 |
| Bst6I | CTCTTC | 4 cut(s) | 1015, 1322, 1383, 2385 |
| BstACI | GRCGYC | 1 cut(s) | 2015 |
| BstAUI | TGTACA | 1 cut(s) | 1479 |
| BstBAI | YACGTR | 1 cut(s) | 2405 |
| BstBI | TTCGAA | 1 cut(s) | 1036 |
| BstC8I | GCNNGC | 4 cut(s) | 886, 967, 1226, 1353 |
| BstDEI | CTNAG | 3 cut(s) | 657, 732, 1436 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 591 |
| BstF5I | GGATG | 5 cut(s) | 618, 1034, 1226, 1554, 2122 |
| BstH2I | RGCGCY | 1 cut(s) | 2018 |
| BstHHI | GCGC | 1 cut(s) | 2017 |
| BstMAI | GTCTC | 1 cut(s) | 749 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 357, 890, 2344, 2353 |
| BstNI | CCWGG | 4 cut(s) | 513, 1117, 1943, 2358 |
| BstNSI | RCATGY | 4 cut(s) | 969, 1735, 2156, 2299 |
| BstSCI | CCNGG | 5 cut(s) | 511, 1115, 1941, 2356, 2419 |
| BstSFI | CTRYAG | 1 cut(s) | 390 |
| BstV1I | GCAGC | 3 cut(s) | 2281, 2325, 2365 |
| BstV2I | GAAGAC | 1 cut(s) | 2237 |
| BstX2I | RGATCY | 2 cut(s) | 616, 1879 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1002 |
| BstYI | RGATCY | 2 cut(s) | 616, 1879 |
| Bsu15I | ATCGAT | 1 cut(s) | 2196 |
| BsuRI | GGCC | 5 cut(s) | 219, 528, 718, 1795, 1941 |
| BsuTUI | ATCGAT | 1 cut(s) | 2196 |
| BtsCI | GGATG | 5 cut(s) | 618, 1034, 1226, 1554, 2122 |
| BtsI | GCAGTG | 1 cut(s) | 1063 |
| BtsIMutI | CAGTG | 9 cut(s) | 54, 249, 318, 360, 842, 905, 1063, 1245, 2183 |
| Cac8I | GCNNGC | 4 cut(s) | 886, 967, 1226, 1353 |
| CciI | TCATGA | 1 cut(s) | 2326 |
| CfoI | GCGC | 1 cut(s) | 2017 |
| Cfr10I | RCCGGY | 1 cut(s) | 286 |
| ClaI | ATCGAT | 1 cut(s) | 2196 |
| CseI | GACGC | 1 cut(s) | 2170 |
| Csp6I | GTAC | 8 cut(s) | 238, 775, 983, 1179, 1480, 1557, 2180, 2276 |
| CspAI | ACCGGT | 1 cut(s) | 286 |
| CviQI | GTAC | 8 cut(s) | 238, 775, 983, 1179, 1480, 1557, 2180, 2276 |
| DdeI | CTNAG | 3 cut(s) | 657, 732, 1436 |
| DinI | GGCGCC | 1 cut(s) | 2016 |
| DraI | TTTAAA | 1 cut(s) | 1093 |
| EaeI | YGGCCR | 1 cut(s) | 526 |
| Eam1104I | CTCTTC | 4 cut(s) | 1015, 1322, 1383, 2385 |
| EarI | CTCTTC | 4 cut(s) | 1015, 1322, 1383, 2385 |
| Eco130I | CCWWGG | 1 cut(s) | 1599 |
| Eco32I | GATATC | 2 cut(s) | 707, 1506 |
| Eco57I | CTGAAG | 6 cut(s) | 285, 1287, 1520, 1643, 2301, 2413 |
| Eco72I | CACGTG | 1 cut(s) | 2405 |
| Eco88I | CYCGRG | 1 cut(s) | 1855 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 591 |
| EcoRII | CCWGG | 4 cut(s) | 511, 1115, 1941, 2356 |
| EcoRV | GATATC | 2 cut(s) | 707, 1506 |
| EcoT14I | CCWWGG | 1 cut(s) | 1599 |
| EcoT22I | ATGCAT | 1 cut(s) | 2158 |
| EgeI | GGCGCC | 1 cut(s) | 2016 |
| EheI | GGCGCC | 1 cut(s) | 2016 |
| ErhI | CCWWGG | 1 cut(s) | 1599 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1437, 1469 |
| FauNDI | CATATG | 2 cut(s) | 823, 2002 |
| FbaI | TGATCA | 4 cut(s) | 37, 322, 1765, 1963 |
| Fnu4HI | GCNGC | 3 cut(s) | 2270, 2339, 2354 |
| FokI | GGATG | 5 cut(s) | 625, 1041, 1233, 1561, 2109 |
| Fsp4HI | GCNGC | 3 cut(s) | 2270, 2339, 2354 |
| FspBI | CTAG | 6 cut(s) | 122, 167, 669, 804, 1890, 1904 |
| GlaI | GCGC | 1 cut(s) | 2016 |
| GluI | GCNGC | 3 cut(s) | 2270, 2339, 2354 |
| HaeII | RGCGCY | 1 cut(s) | 2018 |
| HaeIII | GGCC | 5 cut(s) | 219, 528, 718, 1795, 1941 |
| HapII | CCGG | 4 cut(s) | 287, 529, 2216, 2421 |
| HgaI | GACGC | 1 cut(s) | 2170 |
| HhaI | GCGC | 1 cut(s) | 2017 |
| Hin1I | GRCGYC | 1 cut(s) | 2015 |
| Hin6I | GCGC | 1 cut(s) | 2015 |
| HinP1I | GCGC | 1 cut(s) | 2015 |
| HincII | GTYRAC | 2 cut(s) | 372, 843 |
| HindII | GTYRAC | 2 cut(s) | 372, 843 |
| HindIII | AAGCTT | 1 cut(s) | 1679 |
| HpaI | GTTAAC | 1 cut(s) | 843 |
| HpaII | CCGG | 4 cut(s) | 287, 529, 2216, 2421 |
| HphI | GGTGA | 3 cut(s) | 170, 1838, 2409 |
| Hpy166II | GTNNAC | 8 cut(s) | 240, 372, 629, 777, 843, 1179, 1480, 2417 |
| Hpy8I | GTNNAC | 8 cut(s) | 240, 372, 629, 777, 843, 1179, 1480, 2417 |
| Hpy99I | CGWCG | 1 cut(s) | 2050 |
| HpyAV | CCTTC | 5 cut(s) | 103, 350, 1032, 1202, 1806 |
| HpyCH4III | ACNGT | 3 cut(s) | 364, 837, 1667 |
| HpyCH4IV | ACGT | 3 cut(s) | 797, 1015, 2404 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 357, 890, 2344, 2353 |
| HpyF3I | CTNAG | 3 cut(s) | 657, 732, 1436 |
| HpySE526I | ACGT | 3 cut(s) | 797, 1015, 2404 |
| Hsp92I | GRCGYC | 1 cut(s) | 2015 |
| HspAI | GCGC | 1 cut(s) | 2015 |
| KasI | GGCGCC | 1 cut(s) | 2014 |
| Kpn2I | TCCGGA | 1 cut(s) | 2215 |
| Ksp22I | TGATCA | 4 cut(s) | 37, 322, 1765, 1963 |
| KspAI | GTTAAC | 1 cut(s) | 843 |
| LguI | GCTCTTC | 2 cut(s) | 1322, 1383 |
| LmnI | GCTCC | 4 cut(s) | 573, 653, 871, 1743 |
| Lsp1109I | GCAGC | 3 cut(s) | 2281, 2325, 2365 |
| LweI | GCATC | 2 cut(s) | 1211, 1303 |
| MaeI | CTAG | 6 cut(s) | 122, 167, 669, 804, 1890, 1904 |
| MaeII | ACGT | 3 cut(s) | 797, 1015, 2404 |
| MaeIII | GTNAC | 4 cut(s) | 497, 2400, 2405, 2423 |
| MfeI | CAATTG | 1 cut(s) | 695 |
| MflI | RGATCY | 2 cut(s) | 616, 1879 |
| MhlI | GDGCHC | 1 cut(s) | 578 |
| Mly113I | GGCGCC | 1 cut(s) | 2015 |
| MlyI | GAGTC | 5 cut(s) | 315, 1036, 1847, 2164, 2371 |
| MmeI | TCCRAC | 2 cut(s) | 1362, 1761 |
| Mph1103I | ATGCAT | 1 cut(s) | 2158 |
| MroI | TCCGGA | 1 cut(s) | 2215 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1297 |
| MslI | CAYNNNNRTG | 2 cut(s) | 260, 1000 |
| MspI | CCGG | 4 cut(s) | 287, 529, 2216, 2421 |
| MspR9I | CCNGG | 5 cut(s) | 513, 1117, 1943, 2358, 2421 |
| MunI | CAATTG | 1 cut(s) | 695 |
| Mva1269I | GAATGC | 5 cut(s) | 31, 690, 1151, 1398, 1695 |
| MvaI | CCWGG | 4 cut(s) | 513, 1117, 1943, 2358 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 357, 890, 2344, 2353 |
| NarI | GGCGCC | 1 cut(s) | 2015 |
| NciI | CCSGG | 1 cut(s) | 2421 |
| NdeI | CATATG | 2 cut(s) | 823, 2002 |
| NlaIV | GGNNCC | 3 cut(s) | 618, 873, 2016 |
| NmuCI | GTSAC | 3 cut(s) | 497, 2400, 2405 |
| NsiI | ATGCAT | 1 cut(s) | 2158 |
| NspI | RCATGY | 4 cut(s) | 969, 1735, 2156, 2299 |
| NspV | TTCGAA | 1 cut(s) | 1036 |
| OliI | CACNNNNGTG | 1 cut(s) | 1000 |
| PaeI | GCATGC | 1 cut(s) | 969 |
| PaeR7I | CTCGAG | 1 cut(s) | 1855 |
| PagI | TCATGA | 1 cut(s) | 2326 |
| PciI | ACATGT | 1 cut(s) | 1731 |
| PciSI | GCTCTTC | 2 cut(s) | 1322, 1383 |
| PctI | GAATGC | 5 cut(s) | 31, 690, 1151, 1398, 1695 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1297 |
| PfeI | GAWTC | 9 cut(s) | 198, 296, 397, 419, 817, 1271, 1407, 1604, 2387 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 226 |
| PinAI | ACCGGT | 1 cut(s) | 286 |
| PkrI | GCNGC | 3 cut(s) | 2271, 2340, 2355 |
| PleI | GAGTC | 5 cut(s) | 314, 1036, 1847, 2164, 2371 |
| PluTI | GGCGCC | 1 cut(s) | 2018 |
| PmaCI | CACGTG | 1 cut(s) | 2405 |
| PmlI | CACGTG | 1 cut(s) | 2405 |
| PpsI | GAGTC | 5 cut(s) | 314, 1036, 1847, 2164, 2371 |
| Ppu21I | YACGTR | 1 cut(s) | 2405 |
| PscI | ACATGT | 1 cut(s) | 1731 |
| PshBI | ATTAAT | 1 cut(s) | 1493 |
| Psp6I | CCWGG | 4 cut(s) | 511, 1115, 1941, 2356 |
| PspCI | CACGTG | 1 cut(s) | 2405 |
| PspGI | CCWGG | 4 cut(s) | 511, 1115, 1941, 2356 |
| PspN4I | GGNNCC | 3 cut(s) | 618, 873, 2016 |
| PstI | CTGCAG | 1 cut(s) | 394 |
| PsuI | RGATCY | 2 cut(s) | 616, 1879 |
| RsaI | GTAC | 8 cut(s) | 239, 776, 984, 1180, 1481, 1558, 2181, 2277 |
| RsaNI | GTAC | 8 cut(s) | 238, 775, 983, 1179, 1480, 1557, 2180, 2276 |
| RseI | CAYNNNNRTG | 2 cut(s) | 260, 1000 |
| SapI | GCTCTTC | 2 cut(s) | 1322, 1383 |
| SatI | GCNGC | 3 cut(s) | 2270, 2339, 2354 |
| SchI | GAGTC | 5 cut(s) | 315, 1036, 1847, 2164, 2371 |
| ScrFI | CCNGG | 5 cut(s) | 513, 1117, 1943, 2358, 2421 |
| SduI | GDGCHC | 1 cut(s) | 578 |
| SfaNI | GCATC | 2 cut(s) | 1211, 1303 |
| SfcI | CTRYAG | 1 cut(s) | 390 |
| SfoI | GGCGCC | 1 cut(s) | 2016 |
| Sfr274I | CTCGAG | 1 cut(s) | 1855 |
| SfuI | TTCGAA | 1 cut(s) | 1036 |
| SlaI | CTCGAG | 1 cut(s) | 1855 |
| SmiI | ATTTAAAT | 1 cut(s) | 1093 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 260, 1000 |
| SmlI | CTYRAG | 4 cut(s) | 591, 1139, 1275, 1855 |
| SmoI | CTYRAG | 4 cut(s) | 591, 1139, 1275, 1855 |
| SphI | GCATGC | 1 cut(s) | 969 |
| SspDI | GGCGCC | 1 cut(s) | 2014 |
| SspI | AATATT | 1 cut(s) | 1897 |
| SspMI | CTAG | 6 cut(s) | 122, 167, 669, 804, 1890, 1904 |
| StyD4I | CCNGG | 5 cut(s) | 511, 1115, 1941, 2356, 2419 |
| StyI | CCWWGG | 1 cut(s) | 1599 |
| SwaI | ATTTAAAT | 1 cut(s) | 1093 |
| TaaI | ACNGT | 3 cut(s) | 364, 837, 1667 |
| TaiI | ACGT | 3 cut(s) | 800, 1018, 2407 |
| TaqI | TCGA | 7 cut(s) | 749, 1036, 1788, 1856, 2031, 2045, 2196 |
| TatI | WGTACW | 2 cut(s) | 774, 1479 |
| TfiI | GAWTC | 9 cut(s) | 198, 296, 397, 419, 817, 1271, 1407, 1604, 2387 |
| TscAI | CASTG | 9 cut(s) | 54, 256, 325, 367, 842, 905, 1063, 1252, 2190 |
| TseFI | GTSAC | 3 cut(s) | 497, 2400, 2405 |
| TseI | GCWGC | 3 cut(s) | 2269, 2338, 2353 |
| Tsp45I | GTSAC | 3 cut(s) | 497, 2400, 2405 |
| TspDTI | ATGAA | 9 cut(s) | 369, 533, 830, 963, 1650, 1722, 1923, 1931, 2237 |
| TspGWI | ACGGA | 4 cut(s) | 625, 1438, 1833, 2389 |
| TspRI | CASTG | 9 cut(s) | 54, 256, 325, 367, 842, 905, 1063, 1252, 2190 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 226 |
| VspI | ATTAAT | 1 cut(s) | 1493 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 591 |
| XapI | RAATTY | 4 cut(s) | 906, 1192, 1259, 2037 |
| XbaI | TCTAGA | 1 cut(s) | 803 |
| XceI | RCATGY | 4 cut(s) | 969, 1735, 2156, 2299 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1744 |
| XhoI | CTCGAG | 1 cut(s) | 1855 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1297 |
| XspI | CTAG | 6 cut(s) | 122, 167, 669, 804, 1890, 1904 |
| Zsp2I | ATGCAT | 1 cut(s) | 2158 |