Serine threonine-protein kinase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 254 |
| AccI | GTMKAC | 1 cut(s) | 1530 |
| AccIII | TCCGGA | 2 cut(s) | 544, 2347 |
| AciI | CCGC | 5 cut(s) | 132, 642, 1185, 1800, 2079 |
| AclWI | GGATC | 3 cut(s) | 440, 859, 1953 |
| AcoI | YGGCCR | 2 cut(s) | 883, 2270 |
| AcsI | RAATTY | 1 cut(s) | 337 |
| AcuI | CTGAAG | 2 cut(s) | 1254, 1974 |
| AfaI | GTAC | 1 cut(s) | 197 |
| AfeI | AGCGCT | 1 cut(s) | 1784 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 225, 254, 429, 559, 560, 653, 1845, 2354 |
| AgsI | TTSAA | 6 cut(s) | 700, 982, 1021, 1060, 1612, 1643 |
| AjiI | CACGTC | 1 cut(s) | 2233 |
| AjnI | CCWGG | 3 cut(s) | 160, 1434, 2335 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 241, 273, 1503, 1535 |
| AleI | CACNNNNGTG | 1 cut(s) | 891 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| Alw26I | GTCTC | 7 cut(s) | 180, 249, 402, 718, 858, 1854, 2243 |
| AlwI | GGATC | 3 cut(s) | 440, 859, 1953 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 71 |
| Ama87I | CYCGRG | 4 cut(s) | 305, 491, 1231, 2423 |
| Aor13HI | TCCGGA | 2 cut(s) | 544, 2347 |
| Aor51HI | AGCGCT | 1 cut(s) | 1784 |
| AoxI | GGCC | 5 cut(s) | 883, 1119, 1775, 2162, 2270 |
| ApeKI | GCWGC | 9 cut(s) | 68, 376, 586, 1182, 1316, 1441, 2218, 2257, 2304 |
| ApoI | RAATTY | 1 cut(s) | 337 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 227, 259 |
| AspLEI | GCGC | 3 cut(s) | 688, 1193, 1785 |
| AspS9I | GGNCC | 5 cut(s) | 499, 644, 1119, 1523, 2266 |
| AsuC2I | CCSGG | 5 cut(s) | 129, 480, 561, 1232, 1233 |
| AsuHPI | GGTGA | 4 cut(s) | 763, 1217, 1250, 1415 |
| AsuII | TTCGAA | 1 cut(s) | 1580 |
| AvaI | CYCGRG | 4 cut(s) | 305, 491, 1231, 2423 |
| AvaII | GGWCC | 4 cut(s) | 499, 644, 1523, 2266 |
| AxyI | CCTNAGG | 2 cut(s) | 681, 2262 |
| BalI | TGGCCA | 1 cut(s) | 885 |
| BanII | GRGCYC | 1 cut(s) | 9 |
| BbsI | GAAGAC | 1 cut(s) | 679 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BbvCI | CCTCAGC | 2 cut(s) | 98, 1779 |
| BbvI | GCAGC | 9 cut(s) | 55, 388, 573, 1194, 1303, 1428, 2205, 2269, 2316 |
| BccI | CCATC | 6 cut(s) | 86, 98, 574, 742, 1028, 1202 |
| BciT130I | CCWGG | 3 cut(s) | 162, 1436, 2337 |
| BciVI | GTATCC | 2 cut(s) | 412, 1063 |
| BclI | TGATCA | 1 cut(s) | 276 |
| BcnI | CCSGG | 5 cut(s) | 129, 480, 561, 1232, 1233 |
| BcoDI | GTCTC | 7 cut(s) | 180, 249, 402, 718, 858, 1854, 2243 |
| BfaI | CTAG | 4 cut(s) | 1277, 1809, 2066, 2168 |
| BfmI | CTRYAG | 1 cut(s) | 374 |
| BfoI | RGCGCY | 2 cut(s) | 689, 1786 |
| BfuI | GTATCC | 2 cut(s) | 412, 1063 |
| BisI | GCNGC | 9 cut(s) | 69, 377, 587, 1183, 1317, 1442, 2219, 2258, 2305 |
| BlsI | GCNGC | 9 cut(s) | 70, 378, 588, 1184, 1318, 1443, 2220, 2259, 2306 |
| Bme1390I | CCNGG | 8 cut(s) | 129, 162, 480, 561, 1232, 1233, 1436, 2337 |
| Bme18I | GGWCC | 4 cut(s) | 499, 644, 1523, 2266 |
| BmeT110I | CYCGRG | 4 cut(s) | 305, 491, 1231, 2423 |
| BmgBI | CACGTC | 1 cut(s) | 2233 |
| BmgT120I | GGNCC | 5 cut(s) | 499, 644, 1119, 1523, 2266 |
| BmiI | GGNNCC | 3 cut(s) | 259, 500, 1998 |
| BmrFI | CCNGG | 8 cut(s) | 129, 162, 480, 561, 1232, 1233, 1436, 2337 |
| BmsI | GCATC | 7 cut(s) | 95, 174, 301, 1335, 2213, 2235, 2286 |
| BpiI | GAAGAC | 1 cut(s) | 679 |
| BpmI | CTGGAG | 2 cut(s) | 1457, 1822 |
| Bpu10I | CCTNAGC | 4 cut(s) | 98, 600, 1779, 2322 |
| Bpu14I | TTCGAA | 1 cut(s) | 1580 |
| BpuEI | CTTGAG | 2 cut(s) | 655, 986 |
| BpuMI | CCSGG | 5 cut(s) | 129, 480, 561, 1232, 1233 |
| BsaI | GGTCTC | 2 cut(s) | 858, 1854 |
| BsaJI | CCNNGG | 4 cut(s) | 560, 647, 1231, 2336 |
| BsaWI | WCCGGW | 3 cut(s) | 509, 544, 2347 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 987, 1017 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 225, 254, 429, 559, 560, 653, 1845, 2354 |
| Bse118I | RCCGGY | 3 cut(s) | 519, 2115, 2268 |
| Bse1I | ACTGG | 1 cut(s) | 268 |
| Bse21I | CCTNAGG | 2 cut(s) | 681, 2262 |
| Bse3DI | GCAATG | 2 cut(s) | 904, 1445 |
| BseAI | TCCGGA | 2 cut(s) | 544, 2347 |
| BseBI | CCWGG | 3 cut(s) | 162, 1436, 2337 |
| BseDI | CCNNGG | 4 cut(s) | 560, 647, 1231, 2336 |
| BseGI | GGATG | 5 cut(s) | 730, 780, 1171, 1350, 2226 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 225, 254, 429, 559, 560, 653, 1845, 2354 |
| BseMI | GCAATG | 2 cut(s) | 904, 1445 |
| BseMII | CTCAG | 9 cut(s) | 104, 112, 395, 591, 1793, 1835, 1926, 2253, 2313 |
| BseNI | ACTGG | 1 cut(s) | 268 |
| BseRI | GAGGAG | 3 cut(s) | 1188, 1191, 1703 |
| BseXI | GCAGC | 9 cut(s) | 55, 388, 573, 1194, 1303, 1428, 2205, 2269, 2316 |
| BsgI | GTGCAG | 1 cut(s) | 572 |
| BshFI | GGCC | 5 cut(s) | 885, 1121, 1777, 2164, 2272 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| BsiHKCI | CYCGRG | 4 cut(s) | 305, 491, 1231, 2423 |
| BslFI | GGGAC | 4 cut(s) | 79, 512, 578, 1566 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 225, 254, 429, 559, 560, 653, 1845, 2354 |
| BsmAI | GTCTC | 7 cut(s) | 180, 249, 402, 718, 858, 1854, 2243 |
| BsmBI | CGTCTC | 1 cut(s) | 402 |
| BsmFI | GGGAC | 4 cut(s) | 79, 512, 578, 1566 |
| BsmI | GAATGC | 2 cut(s) | 1118, 1677 |
| BsnI | GGCC | 5 cut(s) | 885, 1121, 1777, 2164, 2272 |
| Bso31I | GGTCTC | 2 cut(s) | 858, 1854 |
| BsoBI | CYCGRG | 4 cut(s) | 305, 491, 1231, 2423 |
| Bsp119I | TTCGAA | 1 cut(s) | 1580 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp13I | TCCGGA | 2 cut(s) | 544, 2347 |
| Bsp143I | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| Bsp19I | CCATGG | 1 cut(s) | 647 |
| BspACI | CCGC | 5 cut(s) | 132, 642, 1185, 1800, 2079 |
| BspANI | GGCC | 5 cut(s) | 885, 1121, 1777, 2164, 2272 |
| BspCNI | CTCAG | 9 cut(s) | 103, 111, 396, 592, 1792, 1836, 1925, 2254, 2314 |
| BspEI | TCCGGA | 2 cut(s) | 544, 2347 |
| BspLI | GGNNCC | 3 cut(s) | 259, 500, 1998 |
| BspMAI | CTGCAG | 1 cut(s) | 378 |
| BspPI | GGATC | 3 cut(s) | 440, 859, 1953 |
| BspQI | GCTCTTC | 2 cut(s) | 47, 1355 |
| BspT104I | TTCGAA | 1 cut(s) | 1580 |
| BspTNI | GGTCTC | 2 cut(s) | 858, 1854 |
| BsrDI | GCAATG | 2 cut(s) | 904, 1445 |
| BsrFI | RCCGGY | 3 cut(s) | 519, 2115, 2268 |
| BsrI | ACTGG | 1 cut(s) | 268 |
| BssAI | RCCGGY | 3 cut(s) | 519, 2115, 2268 |
| BssECI | CCNNGG | 4 cut(s) | 560, 647, 1231, 2336 |
| BssMI | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| BssNAI | GTATAC | 1 cut(s) | 1531 |
| BssT1I | CCWWGG | 1 cut(s) | 647 |
| Bst1107I | GTATAC | 1 cut(s) | 1531 |
| Bst2UI | CCWGG | 3 cut(s) | 162, 1436, 2337 |
| Bst4CI | ACNGT | 8 cut(s) | 211, 220, 322, 656, 878, 890, 1017, 2394 |
| Bst6I | CTCTTC | 3 cut(s) | 47, 533, 1355 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1188 |
| BstBI | TTCGAA | 1 cut(s) | 1580 |
| BstC8I | GCNNGC | 1 cut(s) | 806 |
| BstDSI | CCRYGG | 1 cut(s) | 647 |
| BstF5I | GGATG | 5 cut(s) | 730, 780, 1171, 1350, 2226 |
| BstH2I | RGCGCY | 2 cut(s) | 689, 1786 |
| BstHHI | GCGC | 3 cut(s) | 688, 1193, 1785 |
| BstKTI | GATC | 6 cut(s) | 279, 435, 854, 1210, 1494, 1948 |
| BstMAI | GTCTC | 7 cut(s) | 180, 249, 402, 718, 858, 1854, 2243 |
| BstMBI | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 692, 1188, 1322, 1447, 2257, 2310 |
| BstNI | CCWGG | 3 cut(s) | 162, 1436, 2337 |
| BstNSI | RCATGY | 1 cut(s) | 1717 |
| BstSCI | CCNGG | 8 cut(s) | 127, 160, 478, 559, 1230, 1231, 1434, 2335 |
| BstSFI | CTRYAG | 1 cut(s) | 374 |
| BstV1I | GCAGC | 9 cut(s) | 55, 388, 573, 1194, 1303, 1428, 2205, 2269, 2316 |
| BstV2I | GAAGAC | 1 cut(s) | 679 |
| BstX2I | RGATCY | 1 cut(s) | 432 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 893 |
| BstYI | RGATCY | 1 cut(s) | 432 |
| BstZ17I | GTATAC | 1 cut(s) | 1531 |
| Bsu36I | CCTNAGG | 2 cut(s) | 681, 2262 |
| BsuI | GTATCC | 2 cut(s) | 412, 1063 |
| BsuRI | GGCC | 5 cut(s) | 885, 1121, 1777, 2164, 2272 |
| BtgI | CCRYGG | 1 cut(s) | 647 |
| BtgZI | GCGATG | 3 cut(s) | 117, 906, 2236 |
| BtrI | CACGTC | 1 cut(s) | 2233 |
| BtsCI | GGATG | 5 cut(s) | 730, 780, 1171, 1350, 2226 |
| BtsI | GCAGTG | 2 cut(s) | 81, 815 |
| BtsIMutI | CAGTG | 5 cut(s) | 81, 261, 673, 815, 886 |
| Cac8I | GCNNGC | 1 cut(s) | 806 |
| CaiI | CAGNNNCTG | 1 cut(s) | 71 |
| CfoI | GCGC | 3 cut(s) | 688, 1193, 1785 |
| Cfr10I | RCCGGY | 3 cut(s) | 519, 2115, 2268 |
| Cfr13I | GGNCC | 5 cut(s) | 499, 644, 1119, 1523, 2266 |
| Cfr9I | CCCGGG | 1 cut(s) | 1231 |
| CseI | GACGC | 2 cut(s) | 948, 1308 |
| Csp6I | GTAC | 1 cut(s) | 196 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1953, 1988 |
| CviQI | GTAC | 1 cut(s) | 196 |
| DpnI | GATC | 6 cut(s) | 278, 434, 853, 1209, 1493, 1947 |
| DpnII | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| EaeI | YGGCCR | 2 cut(s) | 883, 2270 |
| Eam1104I | CTCTTC | 3 cut(s) | 47, 533, 1355 |
| EarI | CTCTTC | 3 cut(s) | 47, 533, 1355 |
| EciI | GGCGGA | 1 cut(s) | 147 |
| Ecl136II | GAGCTC | 1 cut(s) | 7 |
| Eco130I | CCWWGG | 1 cut(s) | 647 |
| Eco24I | GRGCYC | 1 cut(s) | 9 |
| Eco31I | GGTCTC | 2 cut(s) | 858, 1854 |
| Eco32I | GATATC | 1 cut(s) | 1263 |
| Eco47I | GGWCC | 4 cut(s) | 499, 644, 1523, 2266 |
| Eco47III | AGCGCT | 1 cut(s) | 1784 |
| Eco53kI | GAGCTC | 1 cut(s) | 7 |
| Eco57I | CTGAAG | 2 cut(s) | 1254, 1974 |
| Eco81I | CCTNAGG | 2 cut(s) | 681, 2262 |
| Eco88I | CYCGRG | 4 cut(s) | 305, 491, 1231, 2423 |
| EcoICRI | GAGCTC | 1 cut(s) | 7 |
| EcoO109I | RGGNCCY | 1 cut(s) | 499 |
| EcoRI | GAATTC | 1 cut(s) | 337 |
| EcoRII | CCWGG | 3 cut(s) | 160, 1434, 2335 |
| EcoRV | GATATC | 1 cut(s) | 1263 |
| EcoT14I | CCWWGG | 1 cut(s) | 647 |
| EcoT22I | ATGCAT | 2 cut(s) | 2140, 2228 |
| EcoT38I | GRGCYC | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 647 |
| Esp3I | CGTCTC | 1 cut(s) | 402 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 853, 885 |
| FaqI | GGGAC | 4 cut(s) | 79, 512, 578, 1566 |
| FauI | CCCGC | 1 cut(s) | 1793 |
| FauNDI | CATATG | 1 cut(s) | 1984 |
| FbaI | TGATCA | 1 cut(s) | 276 |
| FblI | GTMKAC | 1 cut(s) | 1530 |
| Fnu4HI | GCNGC | 9 cut(s) | 69, 377, 587, 1183, 1317, 1442, 2219, 2258, 2305 |
| FokI | GGATG | 5 cut(s) | 737, 787, 1178, 1357, 2213 |
| FriOI | GRGCYC | 1 cut(s) | 9 |
| Fsp4HI | GCNGC | 9 cut(s) | 69, 377, 587, 1183, 1317, 1442, 2219, 2258, 2305 |
| FspBI | CTAG | 4 cut(s) | 1277, 1809, 2066, 2168 |
| GlaI | GCGC | 3 cut(s) | 687, 1192, 1784 |
| GluI | GCNGC | 9 cut(s) | 69, 377, 587, 1183, 1317, 1442, 2219, 2258, 2305 |
| GsuI | CTGGAG | 2 cut(s) | 1457, 1822 |
| HaeII | RGCGCY | 2 cut(s) | 689, 1786 |
| HaeIII | GGCC | 5 cut(s) | 885, 1121, 1777, 2164, 2272 |
| HgaI | GACGC | 2 cut(s) | 948, 1308 |
| HhaI | GCGC | 3 cut(s) | 688, 1193, 1785 |
| Hin6I | GCGC | 3 cut(s) | 686, 1191, 1783 |
| HinP1I | GCGC | 3 cut(s) | 686, 1191, 1783 |
| HindIII | AAGCTT | 4 cut(s) | 448, 1502, 1661, 1726 |
| HinfI | GANTC | 7 cut(s) | 189, 364, 541, 758, 1377, 1835, 2097 |
| HphI | GGTGA | 4 cut(s) | 763, 1217, 1250, 1415 |
| Hpy166II | GTNNAC | 4 cut(s) | 733, 754, 1531, 2360 |
| Hpy8I | GTNNAC | 4 cut(s) | 733, 754, 1531, 2360 |
| Hpy99I | CGWCG | 3 cut(s) | 346, 964, 2369 |
| HpyAV | CCTTC | 9 cut(s) | 311, 471, 564, 1417, 1505, 1949, 2009, 2150, 2154 |
| HpyCH4III | ACNGT | 8 cut(s) | 211, 220, 322, 656, 878, 890, 1017, 2394 |
| HpyCH4IV | ACGT | 1 cut(s) | 2232 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 692, 1188, 1322, 1447, 2257, 2310 |
| HpySE526I | ACGT | 1 cut(s) | 2232 |
| HspAI | GCGC | 3 cut(s) | 686, 1191, 1783 |
| Kpn2I | TCCGGA | 2 cut(s) | 544, 2347 |
| Ksp22I | TGATCA | 1 cut(s) | 276 |
| Kzo9I | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| LguI | GCTCTTC | 2 cut(s) | 47, 1355 |
| LmnI | GCTCC | 4 cut(s) | 4, 12, 1438, 2002 |
| Lsp1109I | GCAGC | 9 cut(s) | 55, 388, 573, 1194, 1303, 1428, 2205, 2269, 2316 |
| LweI | GCATC | 7 cut(s) | 95, 174, 301, 1335, 2213, 2235, 2286 |
| MaeI | CTAG | 4 cut(s) | 1277, 1809, 2066, 2168 |
| MaeII | ACGT | 1 cut(s) | 2232 |
| MaeIII | GTNAC | 6 cut(s) | 179, 526, 819, 872, 1364, 1988 |
| MalI | GATC | 6 cut(s) | 278, 434, 853, 1209, 1493, 1947 |
| MboI | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| MboII | GAAGA | 9 cut(s) | 34, 114, 550, 684, 1256, 1312, 1342, 1439, 1817 |
| MfeI | CAATTG | 1 cut(s) | 904 |
| MflI | RGATCY | 1 cut(s) | 432 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MlsI | TGGCCA | 1 cut(s) | 885 |
| MluNI | TGGCCA | 1 cut(s) | 885 |
| MlyI | GAGTC | 4 cut(s) | 373, 550, 767, 1829 |
| MmeI | TCCRAC | 4 cut(s) | 363, 1064, 1749, 1957 |
| Mox20I | TGGCCA | 1 cut(s) | 885 |
| Mph1103I | ATGCAT | 2 cut(s) | 2140, 2228 |
| MroI | TCCGGA | 2 cut(s) | 544, 2347 |
| MscI | TGGCCA | 1 cut(s) | 885 |
| MseI | TTAA | 4 cut(s) | 516, 1221, 2121, 2408 |
| MslI | CAYNNNNRTG | 1 cut(s) | 891 |
| Msp20I | TGGCCA | 1 cut(s) | 885 |
| MspA1I | CMGCKG | 4 cut(s) | 68, 379, 1185, 2079 |
| MspR9I | CCNGG | 8 cut(s) | 129, 162, 480, 561, 1232, 1233, 1436, 2337 |
| MunI | CAATTG | 1 cut(s) | 904 |
| Mva1269I | GAATGC | 2 cut(s) | 1118, 1677 |
| MvaI | CCWGG | 3 cut(s) | 162, 1436, 2337 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 692, 1188, 1322, 1447, 2257, 2310 |
| NciI | CCSGG | 5 cut(s) | 129, 480, 561, 1232, 1233 |
| NcoI | CCATGG | 1 cut(s) | 647 |
| NdeI | CATATG | 1 cut(s) | 1984 |
| NdeII | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| NlaIV | GGNNCC | 3 cut(s) | 259, 500, 1998 |
| NmuCI | GTSAC | 2 cut(s) | 819, 872 |
| NsiI | ATGCAT | 2 cut(s) | 2140, 2228 |
| NspI | RCATGY | 1 cut(s) | 1717 |
| NspV | TTCGAA | 1 cut(s) | 1580 |
| OliI | CACNNNNGTG | 1 cut(s) | 891 |
| PaeR7I | CTCGAG | 2 cut(s) | 305, 2423 |
| PciSI | GCTCTTC | 2 cut(s) | 47, 1355 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 303 |
| PctI | GAATGC | 2 cut(s) | 1118, 1677 |
| PfeI | GAWTC | 3 cut(s) | 189, 1377, 2097 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 254 |
| PkrI | GCNGC | 9 cut(s) | 70, 378, 588, 1184, 1318, 1443, 2220, 2259, 2306 |
| PleI | GAGTC | 4 cut(s) | 372, 549, 766, 1829 |
| PpsI | GAGTC | 4 cut(s) | 372, 549, 766, 1829 |
| PpuMI | RGGWCCY | 1 cut(s) | 499 |
| Psp124BI | GAGCTC | 1 cut(s) | 9 |
| Psp5II | RGGWCCY | 1 cut(s) | 499 |
| Psp6I | CCWGG | 3 cut(s) | 160, 1434, 2335 |
| PspGI | CCWGG | 3 cut(s) | 160, 1434, 2335 |
| PspN4I | GGNNCC | 3 cut(s) | 259, 500, 1998 |
| PspPI | GGNCC | 5 cut(s) | 499, 644, 1119, 1523, 2266 |
| PspPPI | RGGWCCY | 1 cut(s) | 499 |
| PspXI | VCTCGAGB | 1 cut(s) | 2423 |
| PstI | CTGCAG | 1 cut(s) | 378 |
| PstNI | CAGNNNCTG | 1 cut(s) | 71 |
| PsuI | RGATCY | 1 cut(s) | 432 |
| PvuII | CAGCTG | 2 cut(s) | 68, 379 |
| RsaI | GTAC | 1 cut(s) | 197 |
| RsaNI | GTAC | 1 cut(s) | 196 |
| RseI | CAYNNNNRTG | 1 cut(s) | 891 |
| SacI | GAGCTC | 1 cut(s) | 9 |
| SapI | GCTCTTC | 2 cut(s) | 47, 1355 |
| SaqAI | TTAA | 4 cut(s) | 516, 1221, 2121, 2408 |
| SatI | GCNGC | 9 cut(s) | 69, 377, 587, 1183, 1317, 1442, 2219, 2258, 2305 |
| Sau3AI | GATC | 6 cut(s) | 276, 432, 851, 1207, 1491, 1945 |
| Sau96I | GGNCC | 5 cut(s) | 499, 644, 1119, 1523, 2266 |
| SchI | GAGTC | 4 cut(s) | 373, 550, 767, 1829 |
| ScrFI | CCNGG | 8 cut(s) | 129, 162, 480, 561, 1232, 1233, 1436, 2337 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SfaNI | GCATC | 7 cut(s) | 95, 174, 301, 1335, 2213, 2235, 2286 |
| SfcI | CTRYAG | 1 cut(s) | 374 |
| Sfr274I | CTCGAG | 2 cut(s) | 305, 2423 |
| SfuI | TTCGAA | 1 cut(s) | 1580 |
| SinI | GGWCC | 4 cut(s) | 499, 644, 1523, 2266 |
| SlaI | CTCGAG | 2 cut(s) | 305, 2423 |
| SmaI | CCCGGG | 1 cut(s) | 1233 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 891 |
| SmlI | CTYRAG | 4 cut(s) | 305, 634, 965, 2423 |
| SmoI | CTYRAG | 4 cut(s) | 305, 634, 965, 2423 |
| SsiI | CCGC | 5 cut(s) | 132, 642, 1185, 1800, 2079 |
| SspI | AATATT | 1 cut(s) | 138 |
| SspMI | CTAG | 4 cut(s) | 1277, 1809, 2066, 2168 |
| SstI | GAGCTC | 1 cut(s) | 9 |
| StyD4I | CCNGG | 8 cut(s) | 127, 160, 478, 559, 1230, 1231, 1434, 2335 |
| StyI | CCWWGG | 1 cut(s) | 647 |
| TaaI | ACNGT | 8 cut(s) | 211, 220, 322, 656, 878, 890, 1017, 2394 |
| TaiI | ACGT | 1 cut(s) | 2235 |
| TfiI | GAWTC | 3 cut(s) | 189, 1377, 2097 |
| Tru1I | TTAA | 4 cut(s) | 516, 1221, 2121, 2408 |
| Tru9I | TTAA | 4 cut(s) | 516, 1221, 2121, 2408 |
| TscAI | CASTG | 5 cut(s) | 88, 268, 673, 815, 893 |
| TseFI | GTSAC | 2 cut(s) | 819, 872 |
| TseI | GCWGC | 9 cut(s) | 68, 376, 586, 1182, 1316, 1441, 2218, 2257, 2304 |
| Tsp45I | GTSAC | 2 cut(s) | 819, 872 |
| TspGWI | ACGGA | 4 cut(s) | 787, 864, 1771, 2382 |
| TspMI | CCCGGG | 1 cut(s) | 1231 |
| TspRI | CASTG | 5 cut(s) | 88, 268, 673, 815, 893 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 254 |
| VpaK11BI | GGWCC | 4 cut(s) | 499, 644, 1523, 2266 |
| XapI | RAATTY | 1 cut(s) | 337 |
| XceI | RCATGY | 1 cut(s) | 1717 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1726 |
| XhoI | CTCGAG | 2 cut(s) | 305, 2423 |
| XmaI | CCCGGG | 1 cut(s) | 1231 |
| XmiI | GTMKAC | 1 cut(s) | 1530 |
| XspI | CTAG | 4 cut(s) | 1277, 1809, 2066, 2168 |
| Zsp2I | ATGCAT | 2 cut(s) | 2140, 2228 |