MD02G1167200.v1.1

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000207
Physical Location & Seq
Reverse (-)
14354952 .. 14356950
1999 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1167200.v1.1.491

Sequence Viewer

Length: 1020 bp
ATGTACTGGTGTGCAAATCTAGACATCAGGGAGGGAGGAAGTGGCTGCGTGCTTTGGTTTGATAACCTCACCGGCATAGAAGAATTCACTCCCGGCGGTGGTCAAGACCTTTATATACGGGTGGCAGCTTCAGAACTAGATCATGCTAAGAAAAAGAGCAATTTCAACAAGAGACAGCTACTAGCAATTCTCCTCAGCTTTGCAGTTTTTCTCATGGGATTGCTCGTTGGAATGATATTGTACATGCGGAAGAAAAAAGTCAGAAAAATGAAGGTAACTATTTTCGGACAAAATGCATTAGATAAGGTAGTATTTAATTTCGATAGTGTAGCTAACTGTTCTCATCTTTTTATCCATGCTGAAGAATCTTCTACCATTTCAGGACTCAGAACAAAGGATTGCAGACAAGAGTACCTTGGAGACGACACGGAAGAGATGGAGTTACCACTGTTTGACTTGACCACCATATCTAAAGCCACTAACAACTTTTCAAGCTGCAACAAGCTGGGAGAAGGTGTCTTTGAACCTATGTACAAGGGTCAAAAATTGCTCGACTGGCCTAAGTGCTTCCACATTATAGGTGGAGTTGCCCGATGGCTTCTTTATCTTCACCAGGACTCTAGATTAAGGTTTATACATCGAGATCTGAAACTTAGCAATATTCTGCTAGATGATAATATGAACCCAAAGATTTTAGACTTTGGCTTGGCTAAAACATTCAGCGGTGATCAAATGGTTATATGTGCGTGGATACTATGGATTCAAGATAAACCACTAGAACTAATCGATAAGACGTTTTGGATGTTACGTGTGCAAAGAGTACCTGAGGATAGACCAAGCATGTCATCTGTGGTTTTGATGTTGAGCAATGATGTTGCCTTGCCGCCTCCAAAACAGCCTGGTATTTACACTGAACGAAGCGTCCTTAATGCACCATCAAGGACGCTTCTATGCAGAGGGGCATTGAGGGGGAGCGAAAGGTGCAGTCGCACAGGGCCCCAAATTTACAGGGACCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

340

Amino Acids

38.62

Weight (kDa)

8.65

Isoelectric Point (pI)

48.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 174 - 244 1e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 181 - 243 3.6e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 96, 247, 723, 884
AcsI RAATTY 2 cut(s) 83, 1002
AcuI CTGAAG 2 cut(s) 114, 381
AfaI GTAC 5 cut(s) 5, 242, 413, 533, 822
AfiI CCNNNNNNNGG 1 cut(s) 98
AflIII ACRYGT 1 cut(s) 808
AgsI TTSAA 4 cut(s) 166, 492, 524, 764
AjnI CCWGG 2 cut(s) 612, 898
AloI GAACNNNNNNTCC 2 cut(s) 906, 938
AluBI AGCT 6 cut(s) 128, 178, 198, 332, 495, 505
AluI AGCT 6 cut(s) 128, 178, 198, 332, 495, 505
Alw26I GTCTC 2 cut(s) 166, 414
AoxI GGCC 2 cut(s) 557, 995
ApaI GGGCCC 1 cut(s) 999
ApeKI GCWGC 3 cut(s) 45, 125, 495
ApoI RAATTY 2 cut(s) 83, 1002
AspS9I GGNCC 3 cut(s) 995, 996, 1012
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 3 cut(s) 61, 602, 737
AvaII GGWCC 1 cut(s) 1012
AxyI CCTNAGG 1 cut(s) 825
BaeGI GKGCMC 1 cut(s) 999
BaeI ACNNNNGTAYC 2 cut(s) 395, 428
BanII GRGCYC 1 cut(s) 999
BbvCI CCTCAGC 1 cut(s) 194
BbvI GCAGC 3 cut(s) 32, 137, 482
BccI CCATC 3 cut(s) 430, 588, 943
BciT130I CCWGG 2 cut(s) 614, 900
BciVI GTATCC 1 cut(s) 744
BclI TGATCA 1 cut(s) 727
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 2 cut(s) 166, 414
BfaI CTAG 6 cut(s) 20, 137, 182, 621, 668, 776
BfuI GTATCC 1 cut(s) 744
BglII AGATCT 1 cut(s) 643
BisI GCNGC 4 cut(s) 46, 126, 496, 884
BlsI GCNGC 4 cut(s) 47, 127, 497, 885
Bme1390I CCNGG 3 cut(s) 93, 614, 900
Bme18I GGWCC 1 cut(s) 1012
BmgT120I GGNCC 3 cut(s) 995, 996, 1012
BmiI GGNNCC 4 cut(s) 997, 998, 1013, 1014
BmrFI CCNGG 3 cut(s) 93, 614, 900
Bpu10I CCTNAGC 1 cut(s) 194
BpuMI CCSGG 1 cut(s) 93
Bsa29I ATCGAT 1 cut(s) 786
BsaAI YACGTR 1 cut(s) 809
BsaJI CCNNGG 1 cut(s) 415
BsaXI ACNNNNNCTCC 2 cut(s) 501, 531
Bsc4I CCNNNNNNNGG 1 cut(s) 98
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 2 cut(s) 11, 560
Bse21I CCTNAGG 1 cut(s) 825
Bse3DI GCAATG 1 cut(s) 874
BseBI CCWGG 2 cut(s) 614, 900
BseCI ATCGAT 1 cut(s) 786
BseDI CCNNGG 1 cut(s) 415
BseGI GGATG 1 cut(s) 807
BseLI CCNNNNNNNGG 1 cut(s) 98
BseMI GCAATG 1 cut(s) 874
BseMII CTCAG 3 cut(s) 208, 400, 816
BseNI ACTGG 2 cut(s) 11, 560
BseRI GAGGAG 1 cut(s) 182
BseSI GKGCMC 1 cut(s) 999
BseXI GCAGC 3 cut(s) 32, 137, 482
BseYI CCCAGC 1 cut(s) 505
BsgI GTGCAG 1 cut(s) 1003
BshFI GGCC 2 cut(s) 559, 997
BshVI ATCGAT 1 cut(s) 786
BsiSI CCGG 2 cut(s) 72, 93
BslI CCNNNNNNNGG 1 cut(s) 98
BsmAI GTCTC 2 cut(s) 166, 414
BsmBI CGTCTC 1 cut(s) 414
BsnI GGCC 2 cut(s) 559, 997
Bsp120I GGGCCC 1 cut(s) 995
Bsp1286I GDGCHC 1 cut(s) 999
Bsp1407I TGTACA 2 cut(s) 240, 531
Bsp143I GATC 3 cut(s) 139, 643, 727
BspACI CCGC 4 cut(s) 96, 247, 723, 884
BspANI GGCC 2 cut(s) 559, 997
BspCNI CTCAG 3 cut(s) 207, 399, 817
BspDI ATCGAT 1 cut(s) 786
BspLI GGNNCC 4 cut(s) 997, 998, 1013, 1014
BsrDI GCAATG 1 cut(s) 874
BsrFI RCCGGY 1 cut(s) 71
BsrGI TGTACA 2 cut(s) 240, 531
BsrI ACTGG 2 cut(s) 11, 560
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 1 cut(s) 415
BssMI GATC 3 cut(s) 139, 643, 727
BssT1I CCWWGG 1 cut(s) 415
Bst2UI CCWGG 2 cut(s) 614, 900
Bst4CI ACNGT 2 cut(s) 338, 450
Bst6I CTCTTC 1 cut(s) 426
BstAUI TGTACA 2 cut(s) 240, 531
BstBAI YACGTR 1 cut(s) 809
BstC8I GCNNGC 1 cut(s) 50
BstDEI CTNAG 6 cut(s) 147, 194, 386, 561, 653, 825
BstF5I GGATG 1 cut(s) 807
BstKTI GATC 3 cut(s) 142, 646, 730
BstMAI GTCTC 2 cut(s) 166, 414
BstMBI GATC 3 cut(s) 139, 643, 727
BstMWI GCNNNNNNNGC 2 cut(s) 556, 981
BstNI CCWGG 2 cut(s) 614, 900
BstNSI RCATGY 2 cut(s) 247, 844
BstSCI CCNGG 3 cut(s) 91, 612, 898
BstSLI GKGCMC 1 cut(s) 999
BstV1I GCAGC 3 cut(s) 32, 137, 482
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
Bsu15I ATCGAT 1 cut(s) 786
Bsu36I CCTNAGG 1 cut(s) 825
BsuI GTATCC 1 cut(s) 744
BsuRI GGCC 2 cut(s) 559, 997
BsuTUI ATCGAT 1 cut(s) 786
BtsCI GGATG 1 cut(s) 807
BtsIMutI CAGTG 2 cut(s) 446, 909
Cac8I GCNNGC 1 cut(s) 50
Cfr10I RCCGGY 1 cut(s) 71
Cfr13I GGNCC 3 cut(s) 995, 996, 1012
ClaI ATCGAT 1 cut(s) 786
CseI GACGC 2 cut(s) 910, 952
Csp6I GTAC 5 cut(s) 4, 241, 412, 532, 821
CviAII CATG 5 cut(s) 143, 214, 244, 356, 841
CviQI GTAC 5 cut(s) 4, 241, 412, 532, 821
DdeI CTNAG 6 cut(s) 147, 194, 386, 561, 653, 825
DpnI GATC 3 cut(s) 141, 645, 729
DpnII GATC 3 cut(s) 139, 643, 727
Eam1104I CTCTTC 1 cut(s) 426
EarI CTCTTC 1 cut(s) 426
Eco130I CCWWGG 1 cut(s) 415
Eco24I GRGCYC 1 cut(s) 999
Eco47I GGWCC 1 cut(s) 1012
Eco57I CTGAAG 2 cut(s) 114, 381
Eco81I CCTNAGG 1 cut(s) 825
EcoO109I RGGNCCY 3 cut(s) 995, 996, 1012
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 2 cut(s) 612, 898
EcoT14I CCWWGG 1 cut(s) 415
EcoT22I ATGCAT 1 cut(s) 298
EcoT38I GRGCYC 1 cut(s) 999
ErhI CCWWGG 1 cut(s) 415
Esp3I CGTCTC 1 cut(s) 414
FaeI CATG 5 cut(s) 146, 217, 247, 359, 844
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FatI CATG 5 cut(s) 142, 213, 243, 355, 840
FbaI TGATCA 1 cut(s) 727
Fnu4HI GCNGC 4 cut(s) 46, 126, 496, 884
FokI GGATG 1 cut(s) 814
FriOI GRGCYC 1 cut(s) 999
Fsp4HI GCNGC 4 cut(s) 46, 126, 496, 884
FspBI CTAG 6 cut(s) 20, 137, 182, 621, 668, 776
GluI GCNGC 4 cut(s) 46, 126, 496, 884
GsaI CCCAGC 1 cut(s) 509
HaeIII GGCC 2 cut(s) 559, 997
HapII CCGG 2 cut(s) 72, 93
HgaI GACGC 2 cut(s) 910, 952
Hin1II CATG 5 cut(s) 146, 217, 247, 359, 844
HinfI GANTC 4 cut(s) 365, 384, 617, 760
HpaII CCGG 2 cut(s) 72, 93
HphI GGTGA 3 cut(s) 61, 602, 737
Hpy188I TCNGA 5 cut(s) 133, 263, 287, 389, 648
Hpy188III TCNNGA 6 cut(s) 20, 104, 381, 621, 641, 764
HpyAV CCTTC 2 cut(s) 265, 506
HpyCH4III ACNGT 2 cut(s) 338, 450
HpyCH4IV ACGT 2 cut(s) 794, 808
HpyCH4V TGCA 9 cut(s) 14, 203, 296, 402, 498, 814, 932, 954, 984
HpyF10VI GCNNNNNNNGC 2 cut(s) 556, 981
HpyF3I CTNAG 6 cut(s) 147, 194, 386, 561, 653, 825
HpySE526I ACGT 2 cut(s) 794, 808
Hsp92II CATG 5 cut(s) 146, 217, 247, 359, 844
KflI GGGWCCC 1 cut(s) 1012
Ksp22I TGATCA 1 cut(s) 727
Kzo9I GATC 3 cut(s) 139, 643, 727
LmnI GCTCC 1 cut(s) 972
Lsp1109I GCAGC 3 cut(s) 32, 137, 482
MaeI CTAG 6 cut(s) 20, 137, 182, 621, 668, 776
MaeII ACGT 2 cut(s) 794, 808
MaeIII GTNAC 3 cut(s) 274, 441, 804
MalI GATC 3 cut(s) 141, 645, 729
MboI GATC 3 cut(s) 139, 643, 727
MboII GAAGA 6 cut(s) 92, 262, 360, 374, 443, 599
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 1 cut(s) 999
MluCI AATT 6 cut(s) 83, 160, 186, 316, 545, 1002
MlyI GAGTC 2 cut(s) 378, 611
MmeI TCCRAC 1 cut(s) 208
MnlI CCTC 8 cut(s) 25, 29, 77, 203, 820, 897, 950, 960
Mph1103I ATGCAT 1 cut(s) 298
MseI TTAA 3 cut(s) 315, 626, 927
MspA1I CMGCKG 1 cut(s) 723
MspI CCGG 2 cut(s) 72, 93
MspR9I CCNGG 3 cut(s) 93, 614, 900
MvaI CCWGG 2 cut(s) 614, 900
MwoI GCNNNNNNNGC 2 cut(s) 556, 981
NciI CCSGG 1 cut(s) 93
NdeII GATC 3 cut(s) 139, 643, 727
NlaIII CATG 5 cut(s) 146, 217, 247, 359, 844
NlaIV GGNNCC 4 cut(s) 997, 998, 1013, 1014
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 2 cut(s) 247, 844
PfeI GAWTC 2 cut(s) 365, 760
PkrI GCNGC 4 cut(s) 47, 127, 497, 885
PleI GAGTC 2 cut(s) 378, 611
PpsI GAGTC 2 cut(s) 378, 611
Ppu21I YACGTR 1 cut(s) 809
PpuMI RGGWCCY 1 cut(s) 1012
Psp5II RGGWCCY 1 cut(s) 1012
Psp6I CCWGG 2 cut(s) 612, 898
PspFI CCCAGC 1 cut(s) 505
PspGI CCWGG 2 cut(s) 612, 898
PspN4I GGNNCC 4 cut(s) 997, 998, 1013, 1014
PspOMI GGGCCC 1 cut(s) 995
PspPI GGNCC 3 cut(s) 995, 996, 1012
PspPPI RGGWCCY 1 cut(s) 1012
PsuI RGATCY 1 cut(s) 643
RsaI GTAC 5 cut(s) 5, 242, 413, 533, 822
RsaNI GTAC 5 cut(s) 4, 241, 412, 532, 821
SaqAI TTAA 3 cut(s) 315, 626, 927
SatI GCNGC 4 cut(s) 46, 126, 496, 884
Sau3AI GATC 3 cut(s) 139, 643, 727
Sau96I GGNCC 3 cut(s) 995, 996, 1012
SchI GAGTC 2 cut(s) 378, 611
ScrFI CCNGG 3 cut(s) 93, 614, 900
SduI GDGCHC 1 cut(s) 999
SinI GGWCC 1 cut(s) 1012
Sse9I AATT 6 cut(s) 83, 160, 186, 316, 545, 1002
SsiI CCGC 4 cut(s) 96, 247, 723, 884
SspI AATATT 1 cut(s) 661
SspMI CTAG 6 cut(s) 20, 137, 182, 621, 668, 776
StyD4I CCNGG 3 cut(s) 91, 612, 898
StyI CCWWGG 1 cut(s) 415
TaaI ACNGT 2 cut(s) 338, 450
TaiI ACGT 2 cut(s) 797, 811
TaqI TCGA 4 cut(s) 321, 552, 640, 786
TasI AATT 6 cut(s) 83, 160, 186, 316, 545, 1002
TatI WGTACW 3 cut(s) 3, 240, 531
TauI GCSGC 1 cut(s) 886
TfiI GAWTC 2 cut(s) 365, 760
Tru1I TTAA 3 cut(s) 315, 626, 927
Tru9I TTAA 3 cut(s) 315, 626, 927
TscAI CASTG 2 cut(s) 453, 916
TseI GCWGC 3 cut(s) 45, 125, 495
TspDTI ATGAA 2 cut(s) 284, 695
TspGWI ACGGA 1 cut(s) 443
TspRI CASTG 2 cut(s) 453, 916
VpaK11BI GGWCC 1 cut(s) 1012
XapI RAATTY 2 cut(s) 83, 1002
XbaI TCTAGA 2 cut(s) 19, 620
XceI RCATGY 2 cut(s) 247, 844
XcmI CCANNNNNNNNNTGG 1 cut(s) 578
XspI CTAG 6 cut(s) 20, 137, 182, 621, 668, 776
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.