RchiOBHm_Chr5g0036721

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
30937629 .. 30942166
4538 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31552

Sequence Viewer

Length: 2163 bp
ATGATAAACAGCACAGGATATCTTGTGCTGTTGGGTCAGAATAAGAGTGTTGTTTGGTGGACAAGTTTACCTAAGTATACCCCCAGTGTAATGGTACAGCTATTAGATTCTGGAAACTTAGTAGTACGAGATGTGACAGATGGAAAGTCATTGTGGCAAAGCTTCGATTATCCTTCTGATACATTGTTACCAGAAATGAAGATGGGATGGGACTTTAGGACAGGTCTTAAATGGGGATTATCAGCATGGAAAAATTCAGAAGACCCATGTCCAGGGGAATTCACTTATGGGATTGAAATGGAACCTCATGCATATCCTGAGGCATATTTTTGGAAAGGTGGTGTGAAATATTATCGTTCTGGACCATGGAATGGCCTAAGATTCAGTGGTGCACCAGAACTAAGGCCTAATCCAATTTATAGTTTCGACTTTGTGTATAGTGATGATGAAGTGTACTGCATGTACAAACTTCAAAACAAGTCTGTAATTTCAATCATGGTCTTAAATGGAACCACAGGCACACGCGATCGCCTTACATGGATTGCAGCAGAGCAAACTTGGAGGGCCTATGCATCAGTACCTAGAGATTTCTGTGATCAATATGACCTCTGTGGAGCAAATGCAAATTGTATCATTAGTAACAATCCAGTCTGTCAATGTCTACAAGGATTCACTCCCAAGTCACCAGAGAAATGGAATTTGACAGACTGGTCACTTGGATGTACGCGCAAGAAACCCCTAAGCTGCCAGGAAAGTGATAAAGACGGGTTTGTCAAGTTTACTAACTTGAAATTGCCGGATACTACACATTCTTGGGTGAACAAAAGTATGAACATCAAGGAATGCAGAGCCAAATGCTTGAACAACTGTTCCTGTATGGCTTATACAAGCTCGGATATCAGAGCAGGAGGTTCTGGCTGCGCCATTTGGTTTGGCGATCTACTAGATATCAGAAACTTTCCGGGTGCTGGCCAGGATCTATACATTCGAATGTCGGCTTCAGAGATAGATGATGATAAAGTGAACACAGGAGTTATAGTTGCTGTTGTGATACCTGCAGTGTTTTCAGGAATGCTCTTAGTTGGCTACTATGTCTACCAAAGCAGGACCAAATTGAAAGAGACAGAGAAACGAGAAGAAAGGGCACAAAAGGAGGACCTGGAGCTCCCGCTCTTCAACATAAGCACAATAGCTAGTGCAACAGATAACTTTTCAGATGATATGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAGGGGGACACTAGCAGATGGACAAGAATTTGCCGTGAAGAGGCTTTCAAGCAGTTCTGGCCAAGGATTTAACGAGTTCATGAATGAAATTATAATGATCGCCAAACTTCAGCACCGAAATCTTGTAAAGATTCTTGGTTATTGCGTGCAAGAAGAGGAGAAAATGCTGATGTATGAATACATGCCCAACAGAAGCCTGGACATCTTCATTTTTGATCAAACGAGGGAAGAACTACTGTTAGATTGGCCTAAACGTTTCCACATCATTTGTGGAATTGCTCGGGGTCTCCTCTATCTCCACCAAGATTCCAGGCTAAGGATTATACATAGAGATCTAAAAGCAAGTAATGTTCTACTTGATGATGAAATGAATCCTAAAATTTCAGACTTTGGCTCGGCTAGAATATTAGCGGGAGGAGATCAGACTGGAGGAAATACTAAGAGAGTGGTCGGGACATATGGCTACATGGCACCTGAATACGCTGCTGATGGGCTATTTTCTGTGAAGTCCGATGTCTTTAGCTTCAGCATATTGGTGCTGGAGATTATAAGTGGAAGGCGAAATAAGGGTTTTTATCATCCAGACGATAGCCATAATCTTATTGGAAATGCTTGGAGATTGTGGAATGAAGGAAGGCCTTTAGAATTGATTGATTCATGGTTAGAGAGCTCATGTAATCTATCAGATGTGTTACGTTGCATTCAAGTTAGTCTTTTGTGCGTGCAACATCATCCTGAGGATCGGCCAAGCATGGCTTCTGTGGTTATAATGTTGGGAAGTGATATTGCATTGACTCAACCTAAACAACCTGGTTTCTTTATGGAAAAGGAACATGAAGCAGGCCCTGATATAGGTAATGAATCATCAACCAATGAAACATCCATTTCGCTTTTGGAAGCTCGGTAA

Protein Analysis

720

Amino Acids

81.21

Weight (kDa)

5.34

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 2 - 84 8.4e-24 D-mannose binding lectin
S_locus_glycop PF00954 118 - 228 3.7e-29 S-locus glycoprotein domain
PAN_2 PF08276 249 - 317 6.4e-23 PAN-like domain
Pkinase PF00069 405 - 672 2.9e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 408 - 674 1.6e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1349, 1805, 2024
AasI GACNNNNNNGTC 2 cut(s) 709, 770
Acc36I ACCTGC 1 cut(s) 1063
AccB1I GGYRCC 1 cut(s) 1726
AccB7I CCANNNNNTGG 1 cut(s) 371
AccBSI CCGCTC 1 cut(s) 1171
AccI GTMKAC 3 cut(s) 77, 661, 1095
AccII CGCG 2 cut(s) 525, 727
AciI CCGC 2 cut(s) 1169, 1667
AclI AACGTT 1 cut(s) 1510
AclWI GGATC 2 cut(s) 984, 2004
AcoI YGGCCR 3 cut(s) 970, 1315, 2000
AcsI RAATTY 5 cut(s) 253, 278, 697, 1283, 1635
AcuI CTGAAG 3 cut(s) 984, 1349, 1765
AfaI GTAC 6 cut(s) 96, 126, 455, 464, 579, 724
AfiI CCNNNNNNNGG 6 cut(s) 272, 371, 968, 1296, 1572, 2108
AgsI TTSAA 9 cut(s) 296, 473, 492, 790, 862, 1117, 1177, 1305, 1961
AjnI CCWGG 7 cut(s) 271, 747, 972, 1158, 1452, 1565, 2065
AjuI GAANNNNNNNTTGG 4 cut(s) 1227, 1259, 1996, 2028
AloI GAACNNNNNNTCC 2 cut(s) 854, 886
Alw21I GWGCWC 3 cut(s) 394, 1167, 1928
Alw26I GTCTC 2 cut(s) 1115, 1547
Alw44I GTGCAC 1 cut(s) 390
AlwI GGATC 2 cut(s) 984, 2004
AlwNI CAGNNNCTG 1 cut(s) 2102
Ama87I CYCGRG 1 cut(s) 1536
AoxI GGCC 9 cut(s) 373, 404, 564, 970, 1315, 1502, 1892, 2000, 2098
ApaLI GTGCAC 1 cut(s) 390
ApeKI GCWGC 4 cut(s) 545, 744, 918, 1739
ApoI RAATTY 5 cut(s) 253, 278, 697, 1283, 1635
AsiSI GCGATCGC 1 cut(s) 529
AspLEI GCGC 2 cut(s) 729, 923
AspS9I GGNCC 6 cut(s) 362, 564, 1107, 1156, 1247, 2099
AsuC2I CCSGG 1 cut(s) 963
AsuHPI GGTGA 2 cut(s) 675, 829
AsuII TTCGAA 1 cut(s) 988
AvaI CYCGRG 1 cut(s) 1536
AvaII GGWCC 4 cut(s) 362, 1107, 1156, 1247
AxyI CCTNAGG 2 cut(s) 318, 1992
BaeGI GKGCMC 2 cut(s) 394, 1147
BalI TGGCCA 2 cut(s) 972, 1317
BanI GGYRCC 1 cut(s) 1726
BanII GRGCYC 2 cut(s) 1167, 1928
BbsI GAAGAC 1 cut(s) 267
Bbv12I GWGCWC 3 cut(s) 394, 1167, 1928
BbvI GCAGC 4 cut(s) 557, 731, 905, 1726
BccI CCATC 5 cut(s) 134, 196, 201, 1268, 1739
BceAI ACGGC 1 cut(s) 1274
BciT130I CCWGG 7 cut(s) 273, 749, 974, 1160, 1454, 1567, 2067
BciVI GTATCC 1 cut(s) 793
BclI TGATCA 2 cut(s) 595, 1471
BcnI CCSGG 1 cut(s) 963
BcoDI GTCTC 2 cut(s) 1115, 1547
BfaI CTAG 5 cut(s) 582, 944, 1194, 1268, 1656
BfmI CTRYAG 1 cut(s) 1056
BfuAI ACCTGC 1 cut(s) 1063
BfuI GTATCC 1 cut(s) 793
BglII AGATCT 1 cut(s) 1588
BisI GCNGC 4 cut(s) 546, 745, 919, 1740
BlsI GCNGC 4 cut(s) 547, 746, 920, 1741
Bme1390I CCNGG 8 cut(s) 273, 749, 963, 974, 1160, 1454, 1567, 2067
Bme18I GGWCC 4 cut(s) 362, 1107, 1156, 1247
BmeT110I CYCGRG 1 cut(s) 1536
BmgT120I GGNCC 6 cut(s) 362, 564, 1107, 1156, 1247, 2099
BmiI GGNNCC 3 cut(s) 303, 511, 1728
BmrFI CCNGG 8 cut(s) 273, 749, 963, 974, 1160, 1454, 1567, 2067
BmrI ACTGGG 1 cut(s) 78
BmsI GCATC 1 cut(s) 581
BmuI ACTGGG 1 cut(s) 78
BoxI GACNNNNGTC 1 cut(s) 267
BpiI GAAGAC 1 cut(s) 267
BpmI CTGGAG 3 cut(s) 1181, 1704, 1817
Bpu10I CCTNAGC 2 cut(s) 740, 1571
Bpu14I TTCGAA 1 cut(s) 988
BpuMI CCSGG 1 cut(s) 963
BsaI GGTCTC 1 cut(s) 1547
BsaJI CCNNGG 3 cut(s) 272, 365, 1318
BsaXI ACNNNNNCTCC 2 cut(s) 1023, 1053
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 371, 968, 1296, 1572, 2108
Bse1I ACTGG 4 cut(s) 84, 647, 713, 1687
Bse21I CCTNAGG 2 cut(s) 318, 1992
BseBI CCWGG 7 cut(s) 273, 749, 974, 1160, 1454, 1567, 2067
BseDI CCNNGG 3 cut(s) 272, 365, 1318
BseGI GGATG 5 cut(s) 212, 725, 1834, 1987, 2135
BseLI CCNNNNNNNGG 6 cut(s) 272, 371, 968, 1296, 1572, 2108
BseMII CTCAG 2 cut(s) 309, 1983
BseNI ACTGG 4 cut(s) 84, 647, 713, 1687
BseRI GAGGAG 3 cut(s) 1427, 1535, 1686
BseSI GKGCMC 2 cut(s) 394, 1147
BseXI GCAGC 4 cut(s) 557, 731, 905, 1726
Bsh1236I CGCG 2 cut(s) 525, 727
Bsh1285I CGRYCG 1 cut(s) 529
BshFI GGCC 9 cut(s) 375, 406, 566, 972, 1317, 1504, 1894, 2002, 2100
BshNI GGYRCC 1 cut(s) 1726
BsiEI CGRYCG 1 cut(s) 529
BsiHKAI GWGCWC 3 cut(s) 394, 1167, 1928
BsiHKCI CYCGRG 1 cut(s) 1536
BsiSI CCGG 2 cut(s) 797, 962
BslFI GGGAC 3 cut(s) 224, 1276, 1723
BslI CCNNNNNNNGG 6 cut(s) 272, 371, 968, 1296, 1572, 2108
BsmAI GTCTC 2 cut(s) 1115, 1547
BsmFI GGGAC 3 cut(s) 224, 1276, 1723
BsmI GAATGC 3 cut(s) 848, 1077, 1956
BsnI GGCC 9 cut(s) 375, 406, 566, 972, 1317, 1504, 1894, 2002, 2100
Bso31I GGTCTC 1 cut(s) 1547
BsoBI CYCGRG 1 cut(s) 1536
Bsp119I TTCGAA 1 cut(s) 988
Bsp1286I GDGCHC 4 cut(s) 394, 1147, 1167, 1928
Bsp1407I TGTACA 1 cut(s) 462
Bsp143I GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
Bsp19I CCATGG 1 cut(s) 365
BspACI CCGC 2 cut(s) 1169, 1667
BspANI GGCC 9 cut(s) 375, 406, 566, 972, 1317, 1504, 1894, 2002, 2100
BspCNI CTCAG 2 cut(s) 310, 1984
BspFNI CGCG 2 cut(s) 525, 727
BspHI TCATGA 1 cut(s) 1335
BspLI GGNNCC 3 cut(s) 303, 511, 1728
BspMAI CTGCAG 1 cut(s) 1060
BspMI ACCTGC 1 cut(s) 1063
BspPI GGATC 2 cut(s) 984, 2004
BspQI GCTCTTC 1 cut(s) 1178
BspT104I TTCGAA 1 cut(s) 988
BspT107I GGYRCC 1 cut(s) 1726
BspTNI GGTCTC 1 cut(s) 1547
BsrBI CCGCTC 1 cut(s) 1171
BsrGI TGTACA 1 cut(s) 462
BsrI ACTGG 4 cut(s) 84, 647, 713, 1687
BssECI CCNNGG 3 cut(s) 272, 365, 1318
BssMI GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
BssNAI GTATAC 1 cut(s) 78
BssT1I CCWWGG 2 cut(s) 365, 1318
Bst1107I GTATAC 1 cut(s) 78
Bst2UI CCWGG 7 cut(s) 273, 749, 974, 1160, 1454, 1567, 2067
Bst4CI ACNGT 2 cut(s) 869, 1494
Bst6I CTCTTC 3 cut(s) 1178, 1289, 1404
BstAUI TGTACA 1 cut(s) 462
BstBI TTCGAA 1 cut(s) 988
BstC8I GCNNGC 4 cut(s) 970, 1403, 1979, 2098
BstDSI CCRYGG 1 cut(s) 365
BstENI CCTNNNNNAGG 1 cut(s) 2106
BstF5I GGATG 5 cut(s) 212, 725, 1834, 1987, 2135
BstFNI CGCG 2 cut(s) 525, 727
BstHHI GCGC 2 cut(s) 729, 923
BstKTI GATC 9 cut(s) 529, 598, 940, 979, 1356, 1474, 1591, 1678, 1999
BstMAI GTCTC 2 cut(s) 1115, 1547
BstMBI GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
BstMCI CGRYCG 1 cut(s) 529
BstMWI GCNNNNNNNGC 1 cut(s) 1314
BstNI CCWGG 7 cut(s) 273, 749, 974, 1160, 1454, 1567, 2067
BstNSI RCATGY 2 cut(s) 463, 1441
BstPAI GACNNNNGTC 1 cut(s) 267
BstSCI CCNGG 8 cut(s) 271, 747, 961, 972, 1158, 1452, 1565, 2065
BstSFI CTRYAG 1 cut(s) 1056
BstSLI GKGCMC 2 cut(s) 394, 1147
BstUI CGCG 2 cut(s) 525, 727
BstV1I GCAGC 4 cut(s) 557, 731, 905, 1726
BstV2I GAAGAC 1 cut(s) 267
BstX2I RGATCY 2 cut(s) 976, 1588
BstXI CCANNNNNNTGG 2 cut(s) 91, 693
BstYI RGATCY 2 cut(s) 976, 1588
BstZ17I GTATAC 1 cut(s) 78
Bsu36I CCTNAGG 2 cut(s) 318, 1992
BsuI GTATCC 1 cut(s) 793
BsuRI GGCC 9 cut(s) 375, 406, 566, 972, 1317, 1504, 1894, 2002, 2100
BtgI CCRYGG 1 cut(s) 365
BtsCI GGATG 5 cut(s) 212, 725, 1834, 1987, 2135
BtsI GCAGTG 1 cut(s) 1065
BtsIMutI CAGTG 3 cut(s) 91, 391, 1065
BveI ACCTGC 1 cut(s) 1063
Cac8I GCNNGC 4 cut(s) 970, 1403, 1979, 2098
CaiI CAGNNNCTG 1 cut(s) 2102
CciI TCATGA 1 cut(s) 1335
CfoI GCGC 2 cut(s) 729, 923
Cfr13I GGNCC 6 cut(s) 362, 564, 1107, 1156, 1247, 2099
CsiI ACCWGGT 1 cut(s) 2065
Csp6I GTAC 6 cut(s) 95, 125, 454, 463, 578, 723
CspCI CAANNNNNGTGG 2 cut(s) 1505, 1540
CviQI GTAC 6 cut(s) 95, 125, 454, 463, 578, 723
DpnI GATC 9 cut(s) 528, 597, 939, 978, 1355, 1473, 1590, 1677, 1998
DpnII GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
DrdI GACNNNNNNGTC 2 cut(s) 709, 770
DseDI GACNNNNNNGTC 2 cut(s) 709, 770
EaeI YGGCCR 3 cut(s) 970, 1315, 2000
Eam1104I CTCTTC 3 cut(s) 1178, 1289, 1404
EarI CTCTTC 3 cut(s) 1178, 1289, 1404
Ecl136II GAGCTC 2 cut(s) 1165, 1926
Eco130I CCWWGG 2 cut(s) 365, 1318
Eco147I AGGCCT 2 cut(s) 406, 1894
Eco24I GRGCYC 2 cut(s) 1167, 1928
Eco31I GGTCTC 1 cut(s) 1547
Eco32I GATATC 3 cut(s) 20, 898, 949
Eco47I GGWCC 4 cut(s) 362, 1107, 1156, 1247
Eco53kI GAGCTC 2 cut(s) 1165, 1926
Eco57I CTGAAG 3 cut(s) 984, 1349, 1765
Eco81I CCTNAGG 2 cut(s) 318, 1992
Eco88I CYCGRG 1 cut(s) 1536
EcoICRI GAGCTC 2 cut(s) 1165, 1926
EcoNI CCTNNNNNAGG 1 cut(s) 2106
EcoO109I RGGNCCY 3 cut(s) 564, 1156, 2099
EcoRI GAATTC 1 cut(s) 278
EcoRII CCWGG 7 cut(s) 271, 747, 972, 1158, 1452, 1565, 2065
EcoRV GATATC 3 cut(s) 20, 898, 949
EcoT14I CCWWGG 2 cut(s) 365, 1318
EcoT22I ATGCAT 2 cut(s) 313, 574
EcoT38I GRGCYC 2 cut(s) 1167, 1928
ErhI CCWWGG 2 cut(s) 365, 1318
FalI AAGNNNNNCTT 4 cut(s) 1953, 1985, 1996, 2028
FaqI GGGAC 3 cut(s) 224, 1276, 1723
FauI CCCGC 2 cut(s) 1176, 1660
FauNDI CATATG 1 cut(s) 1714
FbaI TGATCA 2 cut(s) 595, 1471
FblI GTMKAC 3 cut(s) 77, 661, 1095
Fnu4HI GCNGC 4 cut(s) 546, 745, 919, 1740
FokI GGATG 5 cut(s) 219, 732, 1821, 1974, 2122
FriOI GRGCYC 2 cut(s) 1167, 1928
Fsp4HI GCNGC 4 cut(s) 546, 745, 919, 1740
FspBI CTAG 5 cut(s) 582, 944, 1194, 1268, 1656
GlaI GCGC 2 cut(s) 728, 922
GluI GCNGC 4 cut(s) 546, 745, 919, 1740
GsuI CTGGAG 3 cut(s) 1181, 1704, 1817
HaeIII GGCC 9 cut(s) 375, 406, 566, 972, 1317, 1504, 1894, 2002, 2100
HapII CCGG 2 cut(s) 797, 962
HhaI GCGC 2 cut(s) 729, 923
Hin6I GCGC 2 cut(s) 727, 921
HinP1I GCGC 2 cut(s) 727, 921
HindIII AAGCTT 2 cut(s) 160, 1226
HinfI GANTC 9 cut(s) 107, 381, 669, 1387, 1562, 1627, 1910, 2050, 2117
HpaII CCGG 2 cut(s) 797, 962
HphI GGTGA 2 cut(s) 675, 829
Hpy188III TCNNGA 8 cut(s) 111, 317, 360, 1068, 1336, 1708, 1838, 1991
HpyAV CCTTC 5 cut(s) 183, 1229, 1806, 1880, 1884
HpyCH4III ACNGT 2 cut(s) 869, 1494
HpyCH4IV ACGT 2 cut(s) 1510, 1951
HpyF10VI GCNNNNNNNGC 1 cut(s) 1314
HpySE526I ACGT 2 cut(s) 1510, 1951
HspAI GCGC 2 cut(s) 727, 921
Ksp22I TGATCA 2 cut(s) 595, 1471
Kzo9I GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
LguI GCTCTTC 1 cut(s) 1178
LmnI GCTCC 3 cut(s) 614, 1162, 1170
Lsp1109I GCAGC 4 cut(s) 557, 731, 905, 1726
LweI GCATC 1 cut(s) 581
MabI ACCWGGT 1 cut(s) 2065
MaeI CTAG 5 cut(s) 582, 944, 1194, 1268, 1656
MaeII ACGT 2 cut(s) 1510, 1951
MaeIII GTNAC 6 cut(s) 133, 186, 638, 681, 711, 1947
MalI GATC 9 cut(s) 528, 597, 939, 978, 1355, 1473, 1590, 1677, 1998
MbiI CCGCTC 1 cut(s) 1171
MboI GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
MboII GAAGA 8 cut(s) 211, 272, 1148, 1165, 1306, 1421, 1453, 1496
MflI RGATCY 2 cut(s) 976, 1588
MhlI GDGCHC 4 cut(s) 394, 1147, 1167, 1928
MlsI TGGCCA 2 cut(s) 972, 1317
MluNI TGGCCA 2 cut(s) 972, 1317
MlyI GAGTC 1 cut(s) 2044
Mox20I TGGCCA 2 cut(s) 972, 1317
Mph1103I ATGCAT 2 cut(s) 313, 574
MscI TGGCCA 2 cut(s) 972, 1317
MseI TTAA 3 cut(s) 228, 503, 1326
MslI CAYNNNNRTG 3 cut(s) 718, 989, 1790
Msp20I TGGCCA 2 cut(s) 972, 1317
MspI CCGG 2 cut(s) 797, 962
MspR9I CCNGG 8 cut(s) 273, 749, 963, 974, 1160, 1454, 1567, 2067
Mva1269I GAATGC 3 cut(s) 848, 1077, 1956
MvaI CCWGG 7 cut(s) 273, 749, 974, 1160, 1454, 1567, 2067
MvnI CGCG 2 cut(s) 525, 727
MwoI GCNNNNNNNGC 1 cut(s) 1314
NciI CCSGG 1 cut(s) 963
NcoI CCATGG 1 cut(s) 365
NdeI CATATG 1 cut(s) 1714
NdeII GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
NlaIV GGNNCC 3 cut(s) 303, 511, 1728
NmeAIII GCCGAG 1 cut(s) 1631
NmuCI GTSAC 3 cut(s) 133, 681, 711
NsiI ATGCAT 2 cut(s) 313, 574
NspI RCATGY 2 cut(s) 463, 1441
NspV TTCGAA 1 cut(s) 988
PagI TCATGA 1 cut(s) 1335
PceI AGGCCT 2 cut(s) 406, 1894
PciSI GCTCTTC 1 cut(s) 1178
PctI GAATGC 3 cut(s) 848, 1077, 1956
PfeI GAWTC 8 cut(s) 107, 381, 669, 1387, 1562, 1627, 1910, 2117
PflMI CCANNNNNTGG 1 cut(s) 371
PkrI GCNGC 4 cut(s) 547, 746, 920, 1741
Ple19I CGATCG 1 cut(s) 529
PleI GAGTC 1 cut(s) 2044
PpsI GAGTC 1 cut(s) 2044
PpuMI RGGWCCY 1 cut(s) 1156
PshAI GACNNNNGTC 1 cut(s) 267
PsiI TTATAA 3 cut(s) 1349, 1805, 2024
Psp124BI GAGCTC 2 cut(s) 1167, 1928
Psp1406I AACGTT 1 cut(s) 1510
Psp5II RGGWCCY 1 cut(s) 1156
Psp6I CCWGG 7 cut(s) 271, 747, 972, 1158, 1452, 1565, 2065
PspGI CCWGG 7 cut(s) 271, 747, 972, 1158, 1452, 1565, 2065
PspN4I GGNNCC 3 cut(s) 303, 511, 1728
PspPI GGNCC 6 cut(s) 362, 564, 1107, 1156, 1247, 2099
PspPPI RGGWCCY 1 cut(s) 1156
PstI CTGCAG 1 cut(s) 1060
PstNI CAGNNNCTG 1 cut(s) 2102
PsuI RGATCY 2 cut(s) 976, 1588
PvuI CGATCG 1 cut(s) 529
RgaI GCGATCGC 1 cut(s) 529
RsaI GTAC 6 cut(s) 96, 126, 455, 464, 579, 724
RsaNI GTAC 6 cut(s) 95, 125, 454, 463, 578, 723
RseI CAYNNNNRTG 3 cut(s) 718, 989, 1790
SacI GAGCTC 2 cut(s) 1167, 1928
SapI GCTCTTC 1 cut(s) 1178
SaqAI TTAA 3 cut(s) 228, 503, 1326
SatI GCNGC 4 cut(s) 546, 745, 919, 1740
Sau3AI GATC 9 cut(s) 526, 595, 937, 976, 1353, 1471, 1588, 1675, 1996
Sau96I GGNCC 6 cut(s) 362, 564, 1107, 1156, 1247, 2099
SchI GAGTC 1 cut(s) 2044
ScrFI CCNGG 8 cut(s) 273, 749, 963, 974, 1160, 1454, 1567, 2067
SduI GDGCHC 4 cut(s) 394, 1147, 1167, 1928
SexAI ACCWGGT 1 cut(s) 2065
SfaAI GCGATCGC 1 cut(s) 529
SfaNI GCATC 1 cut(s) 581
SfcI CTRYAG 1 cut(s) 1056
SfuI TTCGAA 1 cut(s) 988
SgfI GCGATCGC 1 cut(s) 529
SinI GGWCC 4 cut(s) 362, 1107, 1156, 1247
SmiMI CAYNNNNRTG 3 cut(s) 718, 989, 1790
SseBI AGGCCT 2 cut(s) 406, 1894
SsiI CCGC 2 cut(s) 1169, 1667
SspI AATATT 2 cut(s) 350, 1662
SspMI CTAG 5 cut(s) 582, 944, 1194, 1268, 1656
SstI GAGCTC 2 cut(s) 1167, 1928
StuI AGGCCT 2 cut(s) 406, 1894
StyD4I CCNGG 8 cut(s) 271, 747, 961, 972, 1158, 1452, 1565, 2065
StyI CCWWGG 2 cut(s) 365, 1318
TaaI ACNGT 2 cut(s) 869, 1494
TaiI ACGT 2 cut(s) 1513, 1954
TaqI TCGA 3 cut(s) 165, 426, 988
TatI WGTACW 2 cut(s) 453, 462
TfiI GAWTC 8 cut(s) 107, 381, 669, 1387, 1562, 1627, 1910, 2117
Tru1I TTAA 3 cut(s) 228, 503, 1326
Tru9I TTAA 3 cut(s) 228, 503, 1326
TscAI CASTG 3 cut(s) 91, 391, 1065
TseFI GTSAC 3 cut(s) 133, 681, 711
TseI GCWGC 4 cut(s) 545, 744, 918, 1739
Tsp45I GTSAC 3 cut(s) 133, 681, 711
TspRI CASTG 3 cut(s) 91, 391, 1065
Van91I CCANNNNNTGG 1 cut(s) 371
VneI GTGCAC 1 cut(s) 390
VpaK11BI GGWCC 4 cut(s) 362, 1107, 1156, 1247
XagI CCTNNNNNAGG 1 cut(s) 2106
XapI RAATTY 5 cut(s) 253, 278, 697, 1283, 1635
XceI RCATGY 2 cut(s) 463, 1441
XcmI CCANNNNNNNNNTGG 4 cut(s) 1450, 1523, 1856, 2146
XmiI GTMKAC 3 cut(s) 77, 661, 1095
XspI CTAG 5 cut(s) 582, 944, 1194, 1268, 1656
Zsp2I ATGCAT 2 cut(s) 313, 574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.