Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8490103.1

Orthogroup ID

OG0000207

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 2369

Gene Structure 2369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8490103.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1741 bp

atgggtgatctttgttttgtggtgtttagtactagtttgctctttctgttgttcacagcttcatttgcagttgacagcatcagtccctcccagtctatcagtgataatggcagtgccttggtttcaagtgatggaacatttgagttgggtttcttcagtccaggtaactcaaaacatcgttacgtgggaatttggtacaaaaacatcccagttagaactgttgtttgggttgcaaatcgatgcaacccgattgatgactcatccggtgtgttgatgataaatagcacaggatatcttgtgctgttgggtcagaataagagtgttgtttggtgggcaagtttagcgaagtatacccagagtgtaatggtacagctattagattctggaaacctagtagtacgagatgtgacagatggaaagtcattgtggcaaagctttgattatccttctgatacattgttaccggaaatgaagatgggatgggactttaggacaggtcttaaaagggaattatcagcatggaaaaattcagaagacccatgtccaggagaattcacttacgggattgaaatggagcctcatgcataccctgaggcatatcttcggaaaagtggtgtgaaattttatcgttctggcccatggaatggcctaagattcagtggggcaccagaactagggcctaattcaatttatagttttgattttgtgcataatgatgatgaagtgtactacatgtacaaacttcaaaacaagtctgtaatttcaattgtggtcttaaatggaaccaggagtacgcgcccacgccttacatggattgaagcagagcaaacttggagggccgcaacagtatctagagatttctgtgatcaatatggcctctgtggagcaaatgcagtgtgtatcgttagtaacaatccagtatgtcaatgtctacaaggattcacgcccatgtcaccagagaaatggaatttgacagactggtcacttggatgtacgcgcaagaaaccccaaagctgccaggaaagtgacaaagacgggtttgtcaaattcactgacttgaaattgccagatactacacattcttgggtgaacaaaagtatgaacatcaaggaatgcagagccgaatgcttgaacaactgttcctgtatggcttatacaagctcggacattagagcaggaggttctggctgcgccatttggtttggtgatctattagatatcagacagtttccgggtgatggccaagatctatacattcgaatgttagcttcagagatagaagatgatggtaaagtgaagacaggaattatagttgctgttgtgatagccgcagtgttttcaggaatgatcttaattggctactacgtgtaccgaaggaggaccaaattaaaagatacagaaaaacgagaagaaggggcacagaaggaggacctggagctcccgcttttcaacacaaccacaatagctactgctacagataacttttcagatgataagaagcttggagaaggtggctttggacctgtttacagggggacactagcaaatggacaagaatttgctgtgaagaggctttcaagcagttctggccaaggatttaatgagtttatgaatgaaattataatgattgccaaacttcagcaccgaaatcttgtaaagattcttggttgttgtgtgcaagaagagaaaatgctcatgtacgaatacatgcccaacggaagcctggacaacttcatttttg

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0030054 GO:0031625 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

580

Amino Acids

64.97

Weight (kDa)

5.44

Isoelectric Point (pI)

43.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000207)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27300
fragaria_vesca	FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica	MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica	Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis	pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis	RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata	RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora	Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii	Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa	Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha	Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana	Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1622
AasI	GACNNNNNNGTC	2 cut(s)	979, 1040
AccB1I	GGYRCC	1 cut(s)	664
AccB7I	CCANNNNNTGG	1 cut(s)	644
AccI	GTMKAC	2 cut(s)	350, 931
AccII	CGCG	2 cut(s)	796, 997
AciI	CCGC	3 cut(s)	840, 1329, 1442
AcoI	YGGCCR	2 cut(s)	1240, 1588
AcsI	RAATTY	7 cut(s)	189, 526, 551, 620, 967, 1046, 1556
AcuI	CTGAAG	3 cut(s)	139, 1254, 1622
AfiI	CCNNNNNNNGG	4 cut(s)	545, 644, 674, 1238
AflIII	ACRYGT	2 cut(s)	732, 1365
AhlI	ACTAGT	1 cut(s)	32
AjnI	CCWGG	6 cut(s)	160, 544, 785, 1017, 1431, 1722
AjuI	GAANNNNNNNTTGG	4 cut(s)	208, 240, 1500, 1532
AloI	GAACNNNNNNTCC	2 cut(s)	1124, 1156
AluBI	AGCT	9 cut(s)	59, 373, 435, 1014, 1161, 1268, 1438, 1466, 1501
AluI	AGCT	9 cut(s)	59, 373, 435, 1014, 1161, 1268, 1438, 1466, 1501
Alw21I	GWGCWC	1 cut(s)	1440
AoxI	GGCC	7 cut(s)	634, 646, 677, 837, 874, 1240, 1588
ApeKI	GCWGC	2 cut(s)	1014, 1188
ApoI	RAATTY	7 cut(s)	189, 526, 551, 620, 967, 1046, 1556
AspLEI	GCGC	3 cut(s)	798, 999, 1193
AspS9I	GGNCC	6 cut(s)	635, 677, 837, 1380, 1429, 1520
AsuC2I	CCSGG	1 cut(s)	1233
AsuHPI	GGTGA	5 cut(s)	17, 945, 1099, 1217, 1247
AsuII	TTCGAA	1 cut(s)	1258
AvaII	GGWCC	3 cut(s)	1380, 1429, 1520
AxyI	CCTNAGG	1 cut(s)	591
BaeGI	GKGCMC	2 cut(s)	667, 1420
BalI	TGGCCA	2 cut(s)	1242, 1590
BanI	GGYRCC	1 cut(s)	664
BanII	GRGCYC	1 cut(s)	1440
BbsI	GAAGAC	2 cut(s)	540, 1304
Bbv12I	GWGCWC	1 cut(s)	1440
BbvI	GCAGC	2 cut(s)	1001, 1175
BccI	CCATC	6 cut(s)	125, 407, 469, 474, 1232, 1280
BciT130I	CCWGG	6 cut(s)	162, 546, 787, 1019, 1433, 1724
BclI	TGATCA	1 cut(s)	865
BcnI	CCSGG	1 cut(s)	1233
BcuI	ACTAGT	1 cut(s)	32
BfaI	CTAG	5 cut(s)	33, 392, 674, 852, 1541
BfmI	CTRYAG	1 cut(s)	1473
BglII	AGATCT	1 cut(s)	1246
BisI	GCNGC	4 cut(s)	840, 1015, 1189, 1329
BlsI	GCNGC	4 cut(s)	841, 1016, 1190, 1330
BmcAI	AGTACT	1 cut(s)	31
Bme1390I	CCNGG	7 cut(s)	162, 546, 787, 1019, 1233, 1433, 1724
Bme18I	GGWCC	3 cut(s)	1380, 1429, 1520
BmgT120I	GGNCC	6 cut(s)	635, 677, 837, 1380, 1429, 1520
BmiI	GGNNCC	3 cut(s)	576, 666, 784
BmrFI	CCNGG	7 cut(s)	162, 546, 787, 1019, 1233, 1433, 1724
BmrI	ACTGGG	2 cut(s)	85, 203
BmsI	GCATC	2 cut(s)	87, 230
BmuI	ACTGGG	2 cut(s)	85, 203
BoxI	GACNNNNGTC	1 cut(s)	540
BpiI	GAAGAC	2 cut(s)	540, 1304
BpmI	CTGGAG	1 cut(s)	1454
Bpu14I	TTCGAA	1 cut(s)	1258
BpuMI	CCSGG	1 cut(s)	1233
Bsa29I	ATCGAT	1 cut(s)	238
BsaAI	YACGTR	2 cut(s)	184, 1366
BsaJI	CCNNGG	3 cut(s)	117, 638, 1591
BsaWI	WCCGGW	2 cut(s)	263, 463
Bsc4I	CCNNNNNNNGG	4 cut(s)	545, 644, 674, 1238
Bse1I	ACTGG	4 cut(s)	91, 209, 917, 983
Bse21I	CCTNAGG	1 cut(s)	591
BseBI	CCWGG	6 cut(s)	162, 546, 787, 1019, 1433, 1724
BseCI	ATCGAT	1 cut(s)	238
BseDI	CCNNGG	3 cut(s)	117, 638, 1591
BseGI	GGATG	4 cut(s)	204, 260, 485, 995
BseLI	CCNNNNNNNGG	4 cut(s)	545, 644, 674, 1238
BseMII	CTCAG	1 cut(s)	582
BseNI	ACTGG	4 cut(s)	91, 209, 917, 983
BseSI	GKGCMC	2 cut(s)	667, 1420
BseXI	GCAGC	2 cut(s)	1001, 1175
Bsh1236I	CGCG	2 cut(s)	796, 997
BshFI	GGCC	7 cut(s)	636, 648, 679, 839, 876, 1242, 1590
BshNI	GGYRCC	1 cut(s)	664
BshVI	ATCGAT	1 cut(s)	238
BsiHKAI	GWGCWC	1 cut(s)	1440
BsiSI	CCGG	3 cut(s)	264, 464, 1232
BslFI	GGGAC	3 cut(s)	69, 497, 1549
BslI	CCNNNNNNNGG	4 cut(s)	545, 644, 674, 1238
BsmFI	GGGAC	3 cut(s)	69, 497, 1549
BsmI	GAATGC	2 cut(s)	1118, 1130
BsnI	GGCC	7 cut(s)	636, 648, 679, 839, 876, 1242, 1590
Bsp119I	TTCGAA	1 cut(s)	1258
Bsp1286I	GDGCHC	3 cut(s)	667, 1420, 1440
Bsp1407I	TGTACA	1 cut(s)	735
Bsp143I	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
Bsp19I	CCATGG	1 cut(s)	638
BspACI	CCGC	3 cut(s)	840, 1329, 1442
BspANI	GGCC	7 cut(s)	636, 648, 679, 839, 876, 1242, 1590
BspCNI	CTCAG	1 cut(s)	583
BspDI	ATCGAT	1 cut(s)	238
BspFNI	CGCG	2 cut(s)	796, 997
BspLI	GGNNCC	3 cut(s)	576, 666, 784
BspT104I	TTCGAA	1 cut(s)	1258
BspT107I	GGYRCC	1 cut(s)	664
BsrGI	TGTACA	1 cut(s)	735
BsrI	ACTGG	4 cut(s)	91, 209, 917, 983
BssECI	CCNNGG	3 cut(s)	117, 638, 1591
BssMI	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
BssNAI	GTATAC	1 cut(s)	351
BssT1I	CCWWGG	3 cut(s)	117, 638, 1591
Bst1107I	GTATAC	1 cut(s)	351
Bst2UI	CCWGG	6 cut(s)	162, 546, 787, 1019, 1433, 1724
Bst4CI	ACNGT	4 cut(s)	220, 847, 1139, 1227
Bst6I	CTCTTC	2 cut(s)	1562, 1677
BstAUI	TGTACA	1 cut(s)	735
BstBAI	YACGTR	2 cut(s)	184, 1366
BstBI	TTCGAA	1 cut(s)	1258
BstDEI	CTNAG	2 cut(s)	591, 650
BstDSI	CCRYGG	1 cut(s)	638
BstF5I	GGATG	4 cut(s)	204, 260, 485, 995
BstFNI	CGCG	2 cut(s)	796, 997
BstHHI	GCGC	3 cut(s)	798, 999, 1193
BstKTI	GATC	5 cut(s)	10, 868, 1210, 1249, 1350
BstMBI	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
BstMWI	GCNNNNNNNGC	3 cut(s)	65, 341, 1587
BstNI	CCWGG	6 cut(s)	162, 546, 787, 1019, 1433, 1724
BstNSI	RCATGY	2 cut(s)	736, 1711
BstPAI	GACNNNNGTC	1 cut(s)	540
BstSCI	CCNGG	7 cut(s)	160, 544, 785, 1017, 1231, 1431, 1722
BstSFI	CTRYAG	1 cut(s)	1473
BstSLI	GKGCMC	2 cut(s)	667, 1420
BstUI	CGCG	2 cut(s)	796, 997
BstV1I	GCAGC	2 cut(s)	1001, 1175
BstV2I	GAAGAC	2 cut(s)	540, 1304
BstX2I	RGATCY	1 cut(s)	1246
BstXI	CCANNNNNNTGG	1 cut(s)	963
BstYI	RGATCY	1 cut(s)	1246
BstZ17I	GTATAC	1 cut(s)	351
Bsu15I	ATCGAT	1 cut(s)	238
Bsu36I	CCTNAGG	1 cut(s)	591
BsuRI	GGCC	7 cut(s)	636, 648, 679, 839, 876, 1242, 1590
BsuTUI	ATCGAT	1 cut(s)	238
BtgI	CCRYGG	1 cut(s)	638
BtsCI	GGATG	4 cut(s)	204, 260, 485, 995
BtsI	GCAGTG	3 cut(s)	118, 900, 1338
BtsIMutI	CAGTG	6 cut(s)	106, 118, 664, 900, 1050, 1338
CfoI	GCGC	3 cut(s)	798, 999, 1193
Cfr13I	GGNCC	6 cut(s)	635, 677, 837, 1380, 1429, 1520
ClaI	ATCGAT	1 cut(s)	238
CviAII	CATG	9 cut(s)	519, 540, 581, 639, 733, 810, 949, 1696, 1708
DdeI	CTNAG	2 cut(s)	591, 650
DpnI	GATC	5 cut(s)	9, 867, 1209, 1248, 1349
DpnII	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
DrdI	GACNNNNNNGTC	2 cut(s)	979, 1040
DseDI	GACNNNNNNGTC	2 cut(s)	979, 1040
EaeI	YGGCCR	2 cut(s)	1240, 1588
Eam1104I	CTCTTC	2 cut(s)	1562, 1677
EarI	CTCTTC	2 cut(s)	1562, 1677
Ecl136II	GAGCTC	1 cut(s)	1438
Eco130I	CCWWGG	3 cut(s)	117, 638, 1591
Eco24I	GRGCYC	1 cut(s)	1440
Eco32I	GATATC	2 cut(s)	293, 1219
Eco47I	GGWCC	3 cut(s)	1380, 1429, 1520
Eco53kI	GAGCTC	1 cut(s)	1438
Eco57I	CTGAAG	3 cut(s)	139, 1254, 1622
Eco81I	CCTNAGG	1 cut(s)	591
EcoICRI	GAGCTC	1 cut(s)	1438
EcoO109I	RGGNCCY	2 cut(s)	677, 1429
EcoRI	GAATTC	1 cut(s)	551
EcoRII	CCWGG	6 cut(s)	160, 544, 785, 1017, 1431, 1722
EcoRV	GATATC	2 cut(s)	293, 1219
EcoT14I	CCWWGG	3 cut(s)	117, 638, 1591
EcoT22I	ATGCAT	1 cut(s)	586
EcoT38I	GRGCYC	1 cut(s)	1440
ErhI	CCWWGG	3 cut(s)	117, 638, 1591
FaeI	CATG	9 cut(s)	522, 543, 584, 642, 736, 813, 952, 1699, 1711
FaqI	GGGAC	3 cut(s)	69, 497, 1549
FatI	CATG	9 cut(s)	518, 539, 580, 638, 732, 809, 948, 1695, 1707
FauI	CCCGC	1 cut(s)	1449
FbaI	TGATCA	1 cut(s)	865
FblI	GTMKAC	2 cut(s)	350, 931
Fnu4HI	GCNGC	4 cut(s)	840, 1015, 1189, 1329
FokI	GGATG	4 cut(s)	191, 247, 492, 1002
FriOI	GRGCYC	1 cut(s)	1440
Fsp4HI	GCNGC	4 cut(s)	840, 1015, 1189, 1329
FspBI	CTAG	5 cut(s)	33, 392, 674, 852, 1541
GlaI	GCGC	3 cut(s)	797, 998, 1192
GluI	GCNGC	4 cut(s)	840, 1015, 1189, 1329
GsuI	CTGGAG	1 cut(s)	1454
HaeIII	GGCC	7 cut(s)	636, 648, 679, 839, 876, 1242, 1590
HapII	CCGG	3 cut(s)	264, 464, 1232
HhaI	GCGC	3 cut(s)	798, 999, 1193
Hin1II	CATG	9 cut(s)	522, 543, 584, 642, 736, 813, 952, 1699, 1711
Hin6I	GCGC	3 cut(s)	796, 997, 1191
HinP1I	GCGC	3 cut(s)	796, 997, 1191
HincII	GTYRAC	1 cut(s)	73
HindII	GTYRAC	1 cut(s)	73
HindIII	AAGCTT	2 cut(s)	433, 1499
HinfI	GANTC	5 cut(s)	257, 380, 654, 939, 1660
HpaII	CCGG	3 cut(s)	264, 464, 1232
HphI	GGTGA	5 cut(s)	17, 945, 1099, 1217, 1247
Hpy166II	GTNNAC	8 cut(s)	54, 73, 351, 727, 932, 1090, 1369, 1528
Hpy188I	TCNGA	8 cut(s)	312, 451, 532, 606, 1165, 1223, 1273, 1489
Hpy188III	TCNNGA	3 cut(s)	384, 852, 1341
Hpy8I	GTNNAC	8 cut(s)	54, 73, 351, 727, 932, 1090, 1369, 1528
HpyAV	CCTTC	5 cut(s)	456, 1368, 1406, 1417, 1502
HpyCH4III	ACNGT	4 cut(s)	220, 847, 1139, 1227
HpyCH4IV	ACGT	2 cut(s)	183, 1365
HpyCH4V	TGCA	8 cut(s)	68, 233, 243, 584, 709, 893, 1116, 1678
HpyF10VI	GCNNNNNNNGC	3 cut(s)	65, 341, 1587
HpyF3I	CTNAG	2 cut(s)	591, 650
HpySE526I	ACGT	2 cut(s)	183, 1365
Hsp92II	CATG	9 cut(s)	522, 543, 584, 642, 736, 813, 952, 1699, 1711
HspAI	GCGC	3 cut(s)	796, 997, 1191
Ksp22I	TGATCA	1 cut(s)	865
Kzo9I	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
LmnI	GCTCC	4 cut(s)	574, 884, 1435, 1443
Lsp1109I	GCAGC	2 cut(s)	1001, 1175
LweI	GCATC	2 cut(s)	87, 230
MaeI	CTAG	5 cut(s)	33, 392, 674, 852, 1541
MaeII	ACGT	2 cut(s)	183, 1365
MaeIII	GTNAC	8 cut(s)	164, 179, 406, 459, 908, 951, 981, 1025
MalI	GATC	5 cut(s)	9, 867, 1209, 1248, 1349
MboI	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
MboII	GAAGA	9 cut(s)	145, 484, 545, 593, 1292, 1309, 1421, 1579, 1694
MfeI	CAATTG	1 cut(s)	765
MflI	RGATCY	1 cut(s)	1246
MhlI	GDGCHC	3 cut(s)	667, 1420, 1440
MlsI	TGGCCA	2 cut(s)	1242, 1590
MluNI	TGGCCA	2 cut(s)	1242, 1590
MlyI	GAGTC	1 cut(s)	251
MnlI	CCTC	9 cut(s)	97, 586, 588, 828, 887, 1172, 1371, 1420, 1563
Mox20I	TGGCCA	2 cut(s)	1242, 1590
Mph1103I	ATGCAT	1 cut(s)	586
MscI	TGGCCA	2 cut(s)	1242, 1590
MseI	TTAA	5 cut(s)	501, 776, 1352, 1388, 1599
MslI	CAYNNNNRTG	4 cut(s)	714, 947, 988, 1259
Msp20I	TGGCCA	2 cut(s)	1242, 1590
MspI	CCGG	3 cut(s)	264, 464, 1232
MspR9I	CCNGG	7 cut(s)	162, 546, 787, 1019, 1233, 1433, 1724
MunI	CAATTG	1 cut(s)	765
Mva1269I	GAATGC	2 cut(s)	1118, 1130
MvaI	CCWGG	6 cut(s)	162, 546, 787, 1019, 1433, 1724
MvnI	CGCG	2 cut(s)	796, 997
MwoI	GCNNNNNNNGC	3 cut(s)	65, 341, 1587
NciI	CCSGG	1 cut(s)	1233
NcoI	CCATGG	1 cut(s)	638
NdeII	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
NlaIII	CATG	9 cut(s)	522, 543, 584, 642, 736, 813, 952, 1699, 1711
NlaIV	GGNNCC	3 cut(s)	576, 666, 784
NmuCI	GTSAC	4 cut(s)	406, 951, 981, 1025
NsiI	ATGCAT	1 cut(s)	586
NspI	RCATGY	2 cut(s)	736, 1711
NspV	TTCGAA	1 cut(s)	1258
PciI	ACATGT	1 cut(s)	732
PctI	GAATGC	2 cut(s)	1118, 1130
PfeI	GAWTC	4 cut(s)	380, 654, 939, 1660
PflMI	CCANNNNNTGG	1 cut(s)	644
PfoI	TCCNGGA	1 cut(s)	544
PkrI	GCNGC	4 cut(s)	841, 1016, 1190, 1330
PleI	GAGTC	1 cut(s)	251
PpsI	GAGTC	1 cut(s)	251
Ppu21I	YACGTR	2 cut(s)	184, 1366
PpuMI	RGGWCCY	1 cut(s)	1429
PscI	ACATGT	1 cut(s)	732
PshAI	GACNNNNGTC	1 cut(s)	540
PsiI	TTATAA	1 cut(s)	1622
Psp124BI	GAGCTC	1 cut(s)	1440
Psp5II	RGGWCCY	1 cut(s)	1429
Psp6I	CCWGG	6 cut(s)	160, 544, 785, 1017, 1431, 1722
PspGI	CCWGG	6 cut(s)	160, 544, 785, 1017, 1431, 1722
PspN4I	GGNNCC	3 cut(s)	576, 666, 784
PspPI	GGNCC	6 cut(s)	635, 677, 837, 1380, 1429, 1520
PspPPI	RGGWCCY	1 cut(s)	1429
PsrI	GAACNNNNNNTAC	2 cut(s)	775, 807
PsuI	RGATCY	1 cut(s)	1246
RseI	CAYNNNNRTG	4 cut(s)	714, 947, 988, 1259
SacI	GAGCTC	1 cut(s)	1440
SaqAI	TTAA	5 cut(s)	501, 776, 1352, 1388, 1599
SatI	GCNGC	4 cut(s)	840, 1015, 1189, 1329
Sau3AI	GATC	5 cut(s)	7, 865, 1207, 1246, 1347
Sau96I	GGNCC	6 cut(s)	635, 677, 837, 1380, 1429, 1520
ScaI	AGTACT	1 cut(s)	31
SchI	GAGTC	1 cut(s)	251
ScrFI	CCNGG	7 cut(s)	162, 546, 787, 1019, 1233, 1433, 1724
SduI	GDGCHC	3 cut(s)	667, 1420, 1440
SfaNI	GCATC	2 cut(s)	87, 230
SfcI	CTRYAG	1 cut(s)	1473
SfuI	TTCGAA	1 cut(s)	1258
SinI	GGWCC	3 cut(s)	1380, 1429, 1520
SmiMI	CAYNNNNRTG	4 cut(s)	714, 947, 988, 1259
SpeI	ACTAGT	1 cut(s)	32
SsiI	CCGC	3 cut(s)	840, 1329, 1442
SspMI	CTAG	5 cut(s)	33, 392, 674, 852, 1541
SstI	GAGCTC	1 cut(s)	1440
StyD4I	CCNGG	7 cut(s)	160, 544, 785, 1017, 1231, 1431, 1722
StyI	CCWWGG	3 cut(s)	117, 638, 1591
TaaI	ACNGT	4 cut(s)	220, 847, 1139, 1227
TaiI	ACGT	2 cut(s)	186, 1368
TaqI	TCGA	2 cut(s)	238, 1258
TatI	WGTACW	3 cut(s)	29, 726, 735
TauI	GCSGC	2 cut(s)	842, 1331
TfiI	GAWTC	4 cut(s)	380, 654, 939, 1660
Tru1I	TTAA	5 cut(s)	501, 776, 1352, 1388, 1599
Tru9I	TTAA	5 cut(s)	501, 776, 1352, 1388, 1599
TscAI	CASTG	6 cut(s)	106, 118, 664, 900, 1057, 1338
TseFI	GTSAC	4 cut(s)	406, 951, 981, 1025
TseI	GCWGC	2 cut(s)	1014, 1188
Tsp45I	GTSAC	4 cut(s)	406, 951, 981, 1025
TspDTI	ATGAA	7 cut(s)	51, 485, 735, 1115, 1625, 1629, 1723
TspGWI	ACGGA	1 cut(s)	1731
TspRI	CASTG	6 cut(s)	106, 118, 664, 900, 1057, 1338
Van91I	CCANNNNNTGG	1 cut(s)	644
VpaK11BI	GGWCC	3 cut(s)	1380, 1429, 1520
XapI	RAATTY	7 cut(s)	189, 526, 551, 620, 967, 1046, 1556
XbaI	TCTAGA	1 cut(s)	851
XceI	RCATGY	2 cut(s)	736, 1711
XcmI	CCANNNNNNNNNTGG	2 cut(s)	807, 1720
XmiI	GTMKAC	2 cut(s)	350, 931
XspI	CTAG	5 cut(s)	33, 392, 674, 852, 1541
ZrmI	AGTACT	1 cut(s)	31
Zsp2I	ATGCAT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.