Rorug02G0357400

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
45121324 .. 45121632
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0357400.1

Sequence Viewer

Length: 309 bp
ATGCAACAAGATGTCGTGGCTTCAAAGAAAAGGGATAGGAATGGAGGTTGTGATCCCTCTCCGAAGAAGTTCAAGACCATTATGGGTGGTAAAATTCCAACTTTGCAGGCTGATGCTTTGGGTCTGGTTGGCGACGACCATGATTTTCCTCTTGTCACTCTCAAGAAGAAGATGGGTAGGCCACTGGGGAGCAAGAATAAGAGCCAACGCTCTGGGAAGCAGGCCGGAGCAGCCCCTCTGAGACTCACCTACCCTGCAGCTGGTGCTTCAGGCTCTAGCCCTAGAGATAAGGGCAAAGGAAAGCTTTAG

Protein Analysis

102

Amino Acids

10.72

Weight (kDa)

10.33

Isoelectric Point (pI)

43.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000207)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27300
fragaria_vesca FvH4_3g15930 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g15980 FvH4_3g21350 FvH4_3g21400 FvH4_3g21400 FvH4_6g12332
malus_domestica MD02G1167100.v1.1 MD02G1167200.v1.1 MD03G1185600.v1.1 MD05G1213900.v1.1 MD05G1214100.v1.1 MD05G1214200.v1.1 MD05G1214700.v1.1 MD05G1216300.v1.1 MD05G1216800.v1.1 MD05G1217300.v1.1 MD05G1218000.v1.1 MD11G1231100.v1.1 MD11G1231200.v1.1 MD11G1231400.v1.1 MD11G1231500.v1.1 MD11G1232400.v1.1 MD11G1232500.v1.1
prunus_persica Prupe.4G142300_v2.0.a1 Prupe.4G142400_v2.0.a1 Prupe.4G142500_v2.0.a1 Prupe.4G142600_v2.0.a1 Prupe.4G142800_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195000_v2.0.a1 Prupe.4G195100_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195300_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195400_v2.0.a1 Prupe.4G195500_v2.0.a1 Prupe.4G195700_v2.0.a1 Prupe.4G195900_v2.0.a1
pyrus_communis pycom03g16540 pycom05g19920 pycom11g20460 pycom11g20480 pycom11g20490 pycom11g20500 pycom11g20530
rosa_chinensis RchiOBHm_Chr2g0139311 RchiOBHm_Chr2g0139351 RchiOBHm_Chr5g0026801 RchiOBHm_Chr5g0026851 RchiOBHm_Chr5g0026891 RchiOBHm_Chr5g0026911 RchiOBHm_Chr5g0036571 RchiOBHm_Chr5g0036591 RchiOBHm_Chr5g0036721 RchiOBHm_Chr5g0036741 RchiOBHm_Chr7g0222981
rosa_laevigata RLG00000002006 RLG00000019807 RLG00000032964 RLG00000032968 RLG00000032969 RLG00000033706 RLG00000033708 RLG00000033712 RLG00000033716
rosa_multiflora Rmu_co8256651.1_g000001 Rmu_co8279377.1_g000001 Rmu_co8429919.1_g000001 Rmu_co8490103.1_g000001 Rmu_sc0000774.1_g000002 Rmu_sc0002525.1_g000012 Rmu_sc0004223.1_g000008 Rmu_sc0004390.1_g000002 Rmu_sc0006059.1_g000014 Rmu_sc0006059.1_g000024 Rmu_sc0006514.1_g000020 Rmu_sc0014333.1_g000002 Rmu_ssc0000172.1_g000018 Rmu_ssc0000172.1_g000029
rosa_roxburghii Rroxscaffold_1G00044230 Rroxscaffold_1G00044260 Rroxscaffold_1G00044320 Rroxscaffold_1G00044340 Rroxscaffold_1G00052560 Rroxscaffold_1G00052570 Rroxscaffold_1G00052660 Rroxscaffold_1G00052720 Rroxscaffold_2G00105450 Rroxscaffold_2G00105460
rosa_rugosa Rorug02G0356900 Rorug02G0357000 Rorug02G0357100 Rorug02G0357200 Rorug02G0357300 Rorug02G0357400 Rorug02G0357500 Rorug02G0357600 Rorug05G0095400 Rorug05G0095500 Rorug05G0095500 Rorug05G0095600 Rorug05G0095700 Rorug05G0095800 Rorug05G0157700 Rorug05G0157800
rosa_samantha Rh2AG406800 Rh2AG406900 Rh2BG417300 Rh2CG392900 Rh2DG426200 Rh5AG189300 Rh5AG249400 Rh5AG250100 Rh5BG186300 Rh5BG186900 Rh5BG187000 Rh5BG249500 Rh5BG250600 Rh5BG250900 Rh5BG251500 Rh5BG251800 Rh5CG205500 Rh5CG206300 Rh5CG206700 Rh5CG283000 Rh5CG283300 Rh5CG283500 Rh5DG188500 Rh5DG188700 Rh5DG258700 Rh5DG258900 Rh5DG259600 Rh5DG259900 Rh7CG375800 Rh7DG352500
rosa_wichuraiana Rw2G032960 Rw2G032970 Rw2G033220 Rw2G033230 Rw5G017130 Rw5G017230 Rw5G022940 Rw5G022960 Rw5G022980 Rw7G030420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 47
AcsI RAATTY 1 cut(s) 93
AcuI CTGAAG 1 cut(s) 252
AfiI CCNNNNNNNGG 1 cut(s) 260
AgsI TTSAA 2 cut(s) 24, 73
AluBI AGCT 2 cut(s) 260, 304
AluI AGCT 2 cut(s) 260, 304
Alw26I GTCTC 1 cut(s) 235
AlwI GGATC 1 cut(s) 47
AoxI GGCC 2 cut(s) 179, 222
ApeKI GCWGC 2 cut(s) 230, 257
ApoI RAATTY 1 cut(s) 93
Asp700I GAANNNNTTC 1 cut(s) 68
AsuHPI GGTGA 1 cut(s) 238
BbvI GCAGC 2 cut(s) 242, 269
BccI CCATC 1 cut(s) 166
BcoDI GTCTC 1 cut(s) 235
BfaI CTAG 2 cut(s) 276, 282
BfmI CTRYAG 1 cut(s) 255
BisI GCNGC 2 cut(s) 231, 258
BlsI GCNGC 2 cut(s) 232, 259
BmrI ACTGGG 1 cut(s) 194
BmsI GCATC 1 cut(s) 103
BmuI ACTGGG 1 cut(s) 194
BpuEI CTTGAG 1 cut(s) 146
Bsc4I CCNNNNNNNGG 1 cut(s) 260
Bse1I ACTGG 1 cut(s) 189
BseLI CCNNNNNNNGG 1 cut(s) 260
BseMII CTCAG 1 cut(s) 230
BseNI ACTGG 1 cut(s) 189
BseXI GCAGC 2 cut(s) 242, 269
BshFI GGCC 2 cut(s) 181, 224
BsiSI CCGG 1 cut(s) 225
BslI CCNNNNNNNGG 1 cut(s) 260
BsmAI GTCTC 1 cut(s) 235
BsnI GGCC 2 cut(s) 181, 224
Bsp143I GATC 1 cut(s) 52
BspANI GGCC 2 cut(s) 181, 224
BspCNI CTCAG 1 cut(s) 231
BspMAI CTGCAG 1 cut(s) 259
BspPI GGATC 1 cut(s) 47
BsrI ACTGG 1 cut(s) 189
BssMI GATC 1 cut(s) 52
BstAPI GCANNNNNTGC 1 cut(s) 263
BstC8I GCNNGC 2 cut(s) 108, 222
BstDEI CTNAG 1 cut(s) 239
BstKTI GATC 1 cut(s) 55
BstMAI GTCTC 1 cut(s) 235
BstMBI GATC 1 cut(s) 52
BstMWI GCNNNNNNNGC 2 cut(s) 230, 263
BstSFI CTRYAG 1 cut(s) 255
BstV1I GCAGC 2 cut(s) 242, 269
BstXI CCANNNNNNTGG 1 cut(s) 212
BsuRI GGCC 2 cut(s) 181, 224
BtsIMutI CAGTG 1 cut(s) 182
Cac8I GCNNGC 2 cut(s) 108, 222
CviAII CATG 1 cut(s) 140
DdeI CTNAG 1 cut(s) 239
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
Eco57I CTGAAG 1 cut(s) 252
FaeI CATG 1 cut(s) 143
FaiI YATR 2 cut(s) 83, 141
FalI AAGNNNNNCTT 1 cut(s) 288
FatI CATG 1 cut(s) 139
Fnu4HI GCNGC 2 cut(s) 231, 258
Fsp4HI GCNGC 2 cut(s) 231, 258
FspBI CTAG 2 cut(s) 276, 282
GluI GCNGC 2 cut(s) 231, 258
HaeIII GGCC 2 cut(s) 181, 224
HapII CCGG 1 cut(s) 225
Hin1II CATG 1 cut(s) 143
HindIII AAGCTT 1 cut(s) 302
HinfI GANTC 1 cut(s) 243
HpaII CCGG 1 cut(s) 225
HphI GGTGA 1 cut(s) 238
Hpy188I TCNGA 2 cut(s) 63, 240
Hpy188III TCNNGA 2 cut(s) 73, 163
Hpy99I CGWCG 1 cut(s) 137
HpyCH4V TGCA 3 cut(s) 4, 106, 257
HpyF10VI GCNNNNNNNGC 2 cut(s) 230, 263
HpyF3I CTNAG 1 cut(s) 239
Hsp92II CATG 1 cut(s) 143
Kzo9I GATC 1 cut(s) 52
LmnI GCTCC 2 cut(s) 189, 227
LpnPI CCDG 9 cut(s) 92, 110, 170, 198, 206, 238, 246, 255, 267
Lsp1109I GCAGC 2 cut(s) 242, 269
LweI GCATC 1 cut(s) 103
MaeI CTAG 2 cut(s) 276, 282
MaeIII GTNAC 1 cut(s) 154
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 3 cut(s) 76, 178, 181
MluCI AATT 1 cut(s) 93
MlyI GAGTC 1 cut(s) 237
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 4 cut(s) 38, 67, 159, 246
MroXI GAANNNNTTC 1 cut(s) 68
MspA1I CMGCKG 1 cut(s) 260
MspI CCGG 1 cut(s) 225
MwoI GCNNNNNNNGC 2 cut(s) 230, 263
NdeII GATC 1 cut(s) 52
NlaIII CATG 1 cut(s) 143
NmuCI GTSAC 1 cut(s) 154
PdmI GAANNNNTTC 1 cut(s) 68
PkrI GCNGC 2 cut(s) 232, 259
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
PstI CTGCAG 1 cut(s) 259
PvuII CAGCTG 1 cut(s) 260
SatI GCNGC 2 cut(s) 231, 258
Sau3AI GATC 1 cut(s) 52
SchI GAGTC 1 cut(s) 237
SetI ASST 4 cut(s) 49, 251, 262, 306
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 255
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 1 cut(s) 93
SspMI CTAG 2 cut(s) 276, 282
TasI AATT 1 cut(s) 93
TscAI CASTG 1 cut(s) 189
TseFI GTSAC 1 cut(s) 154
TseI GCWGC 2 cut(s) 230, 257
Tsp45I GTSAC 1 cut(s) 154
TspRI CASTG 1 cut(s) 189
XapI RAATTY 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 68
XspI CTAG 2 cut(s) 276, 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.